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Homology
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: D8LIE4_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE4_ECTSI) HSP 1 Score: 713 bits (1841), Expect = 4.380e-249 Identity = 414/549 (75.41%), Postives = 447/549 (81.42%), Query Frame = 1
Query: 595 MYDDVLNGLGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTATDIAALPTRMQDFAGGALSTAVNNDVRNEAAARAMLEFGAGESCSRGKK-SPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAMGGGTSAG--SMAPGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALGLSSEFCGDEGG--GLGMAFSVEHVGALAAEAMSLVDADGAAEVGDDCSHPLLEAKTPRELALLVKHYRLLQGAKSGETLLTMVGREGSERMAPSGWNVSQLSVGDRIGKNTFLRVVVETIDVGCE-----DESEGDECXXXXXXXXXXXXXXXHDENDG----YNKIRKTTNRHLNRLNHQPRRSPPRRKSKRRNPSVVAGATVHMRHPASDTAFSWRTAGVKDTTGTELHEGASYRLVATVKDVVA-GVAGVAGGVEVTRCRLTLVTPDAT 2196
MYDDVLNGLGVGSAC G+T GRLLAGFTATPRRADGLSLRPFFDHSIGGLDL WGIANGYLVDIHA+AVRT TDIAALPTRMQDF+ GALSTAVNNDVRNEAAARAMLEFGAGE S GKK SPRGIAFCADVRHAHDLA VLN+HNI+AMAVDGGMNKKDRGRAL+AFRSGEVSTLTNCGVLTEGFDAP+CDTIVMCRPTQSAPLYMQMIGRGTRPWL PTPQ AG S A R + IA SPKPRMHVIDLVDNCGKHKVMSMS ALGLSS F GD+ G G+G AFSVEHVG+LAAEAMSLVDADGAAEV + CSHPLLEAKTPRELALLVKHYRLLQGAK+ ET LT+ GR ++ + GW++SQL VGDRIGK++FLRV+VE I +G E DESE XXXXXXXXXXXXXXX DE DG ++K T R R P R+ P RK K P ATV MRHP+S T FSWRT+GVKDT+G ELHEGASYRLVATV + +A G A AG V +TRCRLTLVT DA+
Sbjct: 1 MYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKKSPRGIAFCADVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPYCDTIVMCRPTQSAPLYMQMIGRGTRPWLSPTPQVRPANNADAGADSTASRRRSDIAASPKPRMHVIDLVDNCGKHKVMSMSAALGLSSGFRGDDAGTDGMGGAFSVEHVGSLAAEAMSLVDADGAAEVENACSHPLLEAKTPRELALLVKHYRLLQGAKTAETTLTVTGRGANDGTSSPGWDLSQLCVGDRIGKDSFLRVIVEAILLGYEEGQDDDESEDFXXXXXXXXXXXXXXXXXXDE-DGCERSFSKPHPKTKRR--RFPRAPIRTRPWRKKK---PFAAGSATVRMRHPSSGTIFSWRTSGVKDTSGAELHEGASYRLVATVTEALAAGGAEEAGEVGLTRCRLTLVTADAS 543
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A6H5L6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G6_9PHAE) HSP 1 Score: 667 bits (1722), Expect = 2.170e-233 Identity = 339/374 (90.64%), Postives = 350/374 (93.58%), Query Frame = 1
Query: 154 TTSAKAAAAGPSGVLRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGATRLRKYAAYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTATDIAALPTRMQDFAGGALSTAVNNDVRNEAAARAMLEFGAGESCS-RGKKSPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGA 1272
T +AAAG + VLRPYQ+SVIDRAVELYGQG RRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASF KFLPHL+VGVEKG ETAHAGLDVVVASVQTLGRRGSGA RLRK+A YGGVVVVDEAHHVKAGGMYDDVLNGLGVGSAC G+T GRLLAGFTATPRRADGLSLRPFFDHSIGGLDL WGIANGYLVDIHA+AVRT TDIAALPTRMQDF+ GALSTAVNNDVRNEAAARAMLEFGAGE S R KKSPRGIAFC DVRHAHDLA VLN+HNI+AMAVDGGMNKKDRGRAL+AFRSGEVSTLTNCGVLTEGFDAP CDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGA
Sbjct: 3 TNGPSSAAAGSTSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGNETAHAGLDVVVASVQTLGRRGSGAARLRKFANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPLSSRKKKSPRGIAFCVDVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPSCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGA 376
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A835YHM4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM4_9STRA) HSP 1 Score: 314 bits (805), Expect = 1.660e-92 Identity = 216/505 (42.77%), Postives = 275/505 (54.46%), Query Frame = 1
Query: 193 VLRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLG-RRGSGA-TRLRKYAAYG-GVVVVDEAHHVKAGGMYDDVLNG-----------------LGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTA-------------------------TDIAALPTRM--QDFAGGALSTAVNNDVRNEAAARAM---------------LEFG--------------AGESCSRGKKSPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTE--------GFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAMGGGTSA-GSM-APGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALGLSSEFCGDEGG 1449
+LRPYQ V+ + LY QG R+LVP+ATG+GKT VF+H+P AFPEL +RGTLVLVHR+ELV+QA A + L VG+E E + A D VVASVQTLG RRG+G RLR+ G+V+VDEAHH+ G+Y+ +LNG LG+GS C G T G L+AGFTATP RADG +L PFFD LDL WGI G+LV+I A TDI + + +DF LS AVN RNEA RA+ L G A ++ ++ ++ + FCA V HAHDLA VL+D + A AVDG ++R + FR+G+++ +TN GV TE GFDAP +T+VM RPT S PL+MQMIGRGTRP G + SA G M A R +AI S KP M ++D+VDNCGKHKV + + LGL F G + G
Sbjct: 19 MLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRP-----APGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKDG 516
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: D8LIE3_ECTSI (ResIII domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE3_ECTSI) HSP 1 Score: 221 bits (564), Expect = 3.420e-64 Identity = 120/156 (76.92%), Postives = 126/156 (80.77%), Query Frame = 1
Query: 172 AAAGPSGVLRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQ----------------------AFPELCRRGTLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGATRLRKYAAYGGVVVVDEA 573
AAAG + VLRPYQ+SVIDRAVELYGQG RRLLVPLATGLGKTVVFTHLPQ AFPELCRRGTLVLVHRDELVQQAVASF KFLPHL+VGVEKGPETAHAGLDVVVASVQTLGRRGSGA RL+ +A Y GVVVVDE+
Sbjct: 6 AAAGSTSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQIKTRDEYANGEGRGRFRCLRQQAFPELCRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGPETAHAGLDVVVASVQTLGRRGSGAARLQNFADYAGVVVVDES 161
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A3M1F660_9DELT (DEAD/DEAH box helicase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1F660_9DELT) HSP 1 Score: 230 bits (586), Expect = 2.370e-62 Identity = 159/414 (38.41%), Postives = 216/414 (52.17%), Query Frame = 1
Query: 193 VLRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGATRLRKYAAYG-GVVVVDEAHHVKAGGMYDDVLNGLGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTATDIAALPTRMQDFAGGALSTAVNNDVRNEAAARAMLEFGAGESCSRGKKSPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAMGGGTSAGSMAPGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALGLSSEF 1431
+LR YQ + + + + +G+ R LV L TG GKTV F HLP F L + LVL HR+EL++QA P V +E+ A D+VVASV TLGR +G++RL ++ ++V+DEAHH A Y +L V + + LL G+TATPRR D + L F + DL+ I GYLV + AY V + D++ + TR DF LS VN RN+ +A LE G + I F DVRHA+DLA V + + + V G M K++R L AFRSG + +TNC +LTEGFD P +TI+M RPT+S+ LY QMIGRGTR APG K R+ VID+VDN +H ++S+ + GL F
Sbjct: 16 LLRGYQLACLKAIQQAHSRGVTRQLVSLPTGTGKTVCFAHLP-GFLGLPGK-MLVLAHREELLEQAAGKLEAVNPDRRVEIEQADRHASEEADIVVASVATLGRS-NGSSRLGRFDPQAFRLIVIDEAHHAVAP-TYRAILEYFDVFAP---PSPRSPLLVGYTATPRRGDEVGLESIFQEIVYHRDLREMIEAGYLVALRAYKVTSEVDLSPVHTRHGDFVVNELSDRVNTIDRNDLIVKAYLEKAYGS---------KTIVFTVDVRHAYDLALVFQRYGVPCLPVCGEMPKEERRDVLEAFRSGRIQVITNCNLLTEGFDDPEVETIIMARPTKSSLLYTQMIGRGTR-------------------TAPG---------KERLTVIDVVDNASRHDLVSLPSLFGLPPHF 385
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A840J8U0_9PSEU (Superfamily II DNA or RNA helicase n=1 Tax=Amycolatopsis jiangsuensis TaxID=1181879 RepID=A0A840J8U0_9PSEU) HSP 1 Score: 230 bits (587), Expect = 3.640e-62 Identity = 164/422 (38.86%), Postives = 216/422 (51.18%), Query Frame = 1
Query: 160 SAKAAAAGPSGVLRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRG--TLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGATRLRKYAAYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTA-TDIAALPTRMQDFAGGALSTAVNNDVRNEAAARAMLEFGAGESCSRGKKSPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAMGGGTSAGSMAPGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALG 1416
+A+ A+AGP+ LRPYQA ID + GIRR V L TG GKTVVF+ L E RG T+VL HRDELVQQA A P+L +G+ KGP AG+DV+VASVQ+L R RL+ A +V++DE HH A Y VL LG A + D +G G TAT R+D ++L + + D+ I +GYLV+ VR A D+ + DF AL A+++ + A ARA E A +GI F V AH++A D A A+DG + R L+ F GE+ LTNC VLTEGFDAP+C +V+ RPT SAPLY+QM GRG RP PG+ A+ ++D+V GKHK+ S++ G
Sbjct: 47 AAQPASAGPALKLRPYQAEAIDAIKAAWTAGIRRPAVVLPTGAGKTVVFSALAAMMHE---RGVKTVVLAHRDELVQQAAAKLRAVSPNLRIGIVKGPRRETAGVDVIVASVQSLARE---ERRLQLARAGVRLVIIDECHHAVAN-TYMAVLRDLG---AFSDDPLDGAYAVGVTATLGRSDRVALEAAWQQVVYKRDILDMIRDGYLVNAKGVRVRIAGLDLRTVKRSRGDFQDAALGQAMHDSLAPAAIARAYREHAA---------ERQGIVFTPTVEMAHEMAETFTDEGFPAAAIDGTTPTEQRRETLARFARGELQVLTNCMVLTEGFDAPWCSAVVIARPTSSAPLYIQMAGRGLRPH-------------------PGKRDAV---------ILDVVGVTGKHKLASIADLAG 421
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A445N132_9DELT (DEAD/DEAH box helicase n=1 Tax=uncultured Desulfobacterium sp. TaxID=201089 RepID=A0A445N132_9DELT) HSP 1 Score: 227 bits (578), Expect = 1.890e-61 Identity = 160/413 (38.74%), Postives = 210/413 (50.85%), Query Frame = 1
Query: 196 LRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGA-TRLRKYAAYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTATDIAALPTRMQDFAGGALSTAVNNDVRNEAAARAMLEFGAGESCSRGKKSPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAMGGGTSAGSMAPGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALGLSSEF 1431
LR YQ + E Y GIRR LV L TG GKTV+F P+ F ++ LVL HR EL+ QA + P+LTV VE+ TA DVVVASV TLGR+GS T L + ++VVDEAHH A + VL L V +LL GFTATP+R DG+ L F + L I G+L + AY V T D++ + TRM DF LS AVN + RN+ + + GK++ + FC DV HA LA N ++A AV G M++ +R + L FR G+ S L NC VLTEG+D P + I++ RPT+S LY QMIGRGTR + PG K + V+D+VD +H + S+ GLS +F
Sbjct: 12 LRDYQRECLSAIFERYQAGIRRQLVCLPTGSGKTVIFAEFPRYFK--MKKQMLVLAHRAELLDQACEKIRRANPYLTVAVEQADRTADPECDVVVASVPTLGRKGSRRLTGLDPDRFF--LIVVDEAHHATAD-TFKRVLKYLDVFMP-----ETRKLLVGFTATPKRGDGVGLDAVFQEIVYSRSLPEMIKAGHLSPVAAYRVETDIDLSRVKTRMGDFVTSQLSRAVNIEERNDLIVKVF------HTHLEGKQT---LCFCVDVAHALSLAQAFNREGVSAAAVTGHMDRAEREKELEKFRVGKTSVLANCMVLTEGYDEPSVEGIILARPTKSTLLYTQMIGRGTR-------------------LYPG---------KKNVTVVDIVDVTKEHSLTSLPVLFGLSEQF 377
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A6H5L5W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W6_9PHAE) HSP 1 Score: 214 bits (546), Expect = 1.530e-60 Identity = 145/242 (59.92%), Postives = 175/242 (72.31%), Query Frame = 1
Query: 1504 MSLVDADGAAEVGDDCSHPLLEAKTPRELALLVKHYRLLQGAKSGETLLTMVGREGSERMAPSGWNVSQLSVGDRIGKNTFLRVVVETIDVGCEDESEGDECXXXXXXXXXXXXXXX----HDENDGYNKI-----RKTTNRHLNRLNHQPRRSPPRRKSKRRNPSVVAGATVHMRHPASDTAFSWRTAGVKDTTGTELHEGASYRLVATVKDVVAGVAGVAGGVE--VTRCRLTLVTPDAT 2196
MSLVDADGAAEV + C HPLLEAKTPRELALLVKHYRLLQGAK+ ET LT+ GR ++ ++P GW++SQL VGDRIGK++FLRVVVE I +G E+ + DE XXXXXXXXXXXX +D+ DGY + ++T R R + + R SP R SK++ P ATV MRHP+S T FSW+T+GVKDT+G ELHEGASYRLVATV + +A V G G E VTRCRLTLVT A+
Sbjct: 1 MSLVDADGAAEVENACLHPLLEAKTPRELALLVKHYRLLQGAKAAETTLTVTGRGANDGISPPGWDLSQLYVGDRIGKDSFLRVVVEAILLGYEEGQDDDESEDLXXXXXXXXXXXXXXXXYDDGDGYERSFSKPHQRTKRRRFPRAHIRSRPSP--RWSKKK-PFAAGSATVRMRHPSSGTIFSWKTSGVKDTSGAELHEGASYRLVATVAEALA-VGGTKGPGEIGVTRCRLTLVTAAAS 238
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A3A5ANM4_9DELT (DEAD/DEAH box helicase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A5ANM4_9DELT) HSP 1 Score: 221 bits (563), Expect = 1.960e-59 Identity = 159/413 (38.50%), Postives = 207/413 (50.12%), Query Frame = 1
Query: 196 LRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGAT-RLRKYAAYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTATDIAALPTRMQDFAGGALSTAVNNDVRNEAAARAMLEFGAGESCSRGKKSPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAMGGGTSAGSMAPGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALGLSSEF 1431
LR YQ + + Y GIRR LV L TG GKTVVF P+ F + LVL HR EL+ QA P L V V++ TA DVVVASV TLGR GS RL + ++VVDEAHH A Y VL+ GV S DT +L GFTATP+R DG+ L F + L I G+L + Y V T D++ + TRM DF LS VN + RNE S G+++ + FC DV HA LAH + + A +V G M++ RG+ L F SG + L NC VLTEG+D P + I++ RPT+SA LY QMIGRGTR + PG K + +ID+VD +H++ ++ + GLS +F
Sbjct: 3 LRDYQHQCLAAILGRYQAGIRRQLVCLPTGSGKTVVFAEFPRYFR--MKNRMLVLAHRGELLDQARDKIRAVNPALRVEVDQADRTADPDCDVVVASVPTLGREGSSRLKRLNPDRFF--LIVVDEAHHATAS-TYKLVLDYFGVFSP---DTR--KLCVGFTATPKRGDGVGLDAVFQEIVFSRSLPEMIQAGFLSPVAGYRVETEIDLSRVKTRMGDFVASQLSKTVNVEERNEIIVEVF------RSHLEGRQT---LCFCVDVAHAQSLAHAFRLNGVRAESVSGDMDRSVRGKLLEDFASGRIQVLANCMVLTEGYDEPGVEGIILARPTKSALLYTQMIGRGTR-------------------LHPG---------KQNVTIIDIVDVTREHRLTTLPSLFGLSEKF 368
BLAST of mRNA_P-littoralis_Contig198.4.2 vs. uniprot
Match: A0A6J4XIT3_9DELT (DNA helicase, phage associated Type III restriction enzme n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XIT3_9DELT) HSP 1 Score: 220 bits (561), Expect = 4.510e-59 Identity = 161/416 (38.70%), Postives = 202/416 (48.56%), Query Frame = 1
Query: 196 LRPYQASVIDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGAT-RLRKYAAYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACNGDTANGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTATDIAALPTRMQDFAGGALSTAVNNDVRNEAAA---RAMLEFGAGESCSRGKKSPRGIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVSTLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQGAMGGGTSAGSMAPGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALGLSSEF 1431
LR YQ ++ + Y G+RR L L TG GKTV+F P+ F R LVL HR EL++QA P L + VE+ A DVVVASV TLGRRGS RL + ++VVDEAHH A Y VL GV A DTA +LL GFTATP+R DG L F + L I YL + AY V T D++ + TRM DF LS AVN RN+ R+ LE R + FC DV H LA N +I A AV G M++ R +AL F +G + L NC VLTEG+D P I++ RPT+SA LY QM+GRGTR + PG K + +ID+VD H + ++ G S EF
Sbjct: 13 LRDYQRECLEAIMTRYRAGVRRQLTCLPTGSGKTVIFAEFPRYFR--MRNQMLVLAHRSELLEQACDKIRCTNPDLKIAVEQAGRIADPACDVVVASVPTLGRRGSKRLQRLDPNRFF--LIVVDEAHHATAA-TYKRVLEYFGVFEA---DTA--KLLVGFTATPKRGDGQGLDAVFQEIVFSRSLPEMIHAKYLAPVAAYRVETDIDLSRVKTRMGDFVTSHLSRAVNIAPRNDLVVNVFRSKLE------------DRRTLCFCVDVAHTRSLAEAFNRMDIPAAAVSGDMDRAARAKALEDFHTGRIRVLANCMVLTEGYDEPSVSGIILARPTKSALLYTQMVGRGTR-------------------LHPG---------KQNVTIIDIVDVTRDHSLTTLPGLFGFSEEF 378
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LIE4 |
| Preferred name | irc3 |
| PFAMs | Helicase_C,ResIII |
| Model size | 2477 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K17677 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000002,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022613,GO:0031974,GO:0031981,GO:0032042,GO:0033676,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 |
| Exons | 17 |
| Evalue | 1.77e-251 |
| EggNOG OGs | COG1061@1|root,2QT4U@2759|Eukaryota |
| Description | DEAD DEAH box helicase |
| Cds size | 2130 |
| COG category | KL |
| BRITE | ko00000,ko01000,ko03029 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789947.732645-UTR-P-littoralis_Contig198:31948..31988 | 1680789947.732645-UTR-P-littoralis_Contig198:31948..31988 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig198 31949..31988 + |
| 1680789947.7500253-UTR-P-littoralis_Contig198:33452..33481 | 1680789947.7500253-UTR-P-littoralis_Contig198:33452..33481 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig198 33453..33481 + |
| 1680789947.9327416-UTR-P-littoralis_Contig198:45296..45574 | 1680789947.9327416-UTR-P-littoralis_Contig198:45296..45574 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig198 45297..45574 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789947.762229-CDS-P-littoralis_Contig198:33481..33560 | 1680789947.762229-CDS-P-littoralis_Contig198:33481..33560 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 33482..33560 + |
| 1680789947.7713192-CDS-P-littoralis_Contig198:36158..36331 | 1680789947.7713192-CDS-P-littoralis_Contig198:36158..36331 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 36159..36331 + |
| 1680789947.7818983-CDS-P-littoralis_Contig198:36943..37009 | 1680789947.7818983-CDS-P-littoralis_Contig198:36943..37009 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 36944..37009 + |
| 1680789947.793392-CDS-P-littoralis_Contig198:37989..38076 | 1680789947.793392-CDS-P-littoralis_Contig198:37989..38076 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 37990..38076 + |
| 1680789947.8029447-CDS-P-littoralis_Contig198:38787..38883 | 1680789947.8029447-CDS-P-littoralis_Contig198:38787..38883 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 38788..38883 + |
| 1680789947.8120935-CDS-P-littoralis_Contig198:39427..39552 | 1680789947.8120935-CDS-P-littoralis_Contig198:39427..39552 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 39428..39552 + |
| 1680789947.8210478-CDS-P-littoralis_Contig198:40188..40339 | 1680789947.8210478-CDS-P-littoralis_Contig198:40188..40339 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 40189..40339 + |
| 1680789947.8318465-CDS-P-littoralis_Contig198:40675..40797 | 1680789947.8318465-CDS-P-littoralis_Contig198:40675..40797 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 40676..40797 + |
| 1680789947.8425233-CDS-P-littoralis_Contig198:41064..41170 | 1680789947.8425233-CDS-P-littoralis_Contig198:41064..41170 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 41065..41170 + |
| 1680789947.851532-CDS-P-littoralis_Contig198:41678..41788 | 1680789947.851532-CDS-P-littoralis_Contig198:41678..41788 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 41679..41788 + |
| 1680789947.8643308-CDS-P-littoralis_Contig198:42167..42250 | 1680789947.8643308-CDS-P-littoralis_Contig198:42167..42250 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 42168..42250 + |
| 1680789947.8757565-CDS-P-littoralis_Contig198:43030..43152 | 1680789947.8757565-CDS-P-littoralis_Contig198:43030..43152 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 43031..43152 + |
| 1680789947.8868542-CDS-P-littoralis_Contig198:43479..43566 | 1680789947.8868542-CDS-P-littoralis_Contig198:43479..43566 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 43480..43566 + |
| 1680789947.8985136-CDS-P-littoralis_Contig198:43803..43950 | 1680789947.8985136-CDS-P-littoralis_Contig198:43803..43950 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 43804..43950 + |
| 1680789947.909426-CDS-P-littoralis_Contig198:44549..44678 | 1680789947.909426-CDS-P-littoralis_Contig198:44549..44678 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 44550..44678 + |
| 1680789947.9238644-CDS-P-littoralis_Contig198:44849..45296 | 1680789947.9238644-CDS-P-littoralis_Contig198:44849..45296 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig198 44850..45296 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig198.4.2 >prot_P-littoralis_Contig198.4.2 ID=prot_P-littoralis_Contig198.4.2|Name=mRNA_P-littoralis_Contig198.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=710bp
MRLGSVRYRRWTRRCFSSSGPIAVCPARTTSAKAAAAGPSGVLRPYQASV IDRAVELYGQGIRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHR DELVQQAVASFAKFLPHLTVGVEKGPETAHAGLDVVVASVQTLGRRGSGA TRLRKYAAYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSACNGDTANGRLL AGFTATPRRADGLSLRPFFDHSIGGLDLQWGIANGYLVDIHAYAVRTATD IAALPTRMQDFAGGALSTAVNNDVRNEAAARAMLEFGAGESCSRGKKSPR GIAFCADVRHAHDLAHVLNDHNITAMAVDGGMNKKDRGRALSAFRSGEVS TLTNCGVLTEGFDAPFCDTIVMCRPTQSAPLYMQMIGRGTRPWLPPTPQG AMGGGTSAGSMAPGRLTAIAGSPKPRMHVIDLVDNCGKHKVMSMSTALGL SSEFCGDEGGGLGMAFSVEHVGALAAEAMSLVDADGAAEVGDDCSHPLLE AKTPRELALLVKHYRLLQGAKSGETLLTMVGREGSERMAPSGWNVSQLSV GDRIGKNTFLRVVVETIDVGCEDESEGDECDDDNDFDEFDDFDENHDEND GYNKIRKTTNRHLNRLNHQPRRSPPRRKSKRRNPSVVAGATVHMRHPASD TAFSWRTAGVKDTTGTELHEGASYRLVATVKDVVAGVAGVAGGVEVTRCR LTLVTPDAT* back to topmRNA from alignment at P-littoralis_Contig198:31949..45574+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig198.4.2 ID=mRNA_P-littoralis_Contig198.4.2|Name=mRNA_P-littoralis_Contig198.4.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=13626bp|location=Sequence derived from alignment at P-littoralis_Contig198:31949..45574+ (Pylaiella littoralis U1_48) GCTGCCCTGGTGATCAACTCGTGCTCCTCGCGCAGGTCAAGTAAGTCGCA
CGCGCTATCCTGAAGCTGTTAAGGCACTTTGATTTTGTCTTCATCGGGAT
AAATCATAATCCTGCGCCATCATGTGATACCTGAGTTCAAACCGCTGTCT
GTTGTTGGTTGCATGTGACCCTTGCAGCTCTCGGACTTCACACCAATGTT
TCGTACCGATAGAGTTTCCAAAATCGACCGATACTACACACAACAACAAG
ATTAGATGATTACAGAACACGGAGCTTGAATAATTCTTGATCAACACTGG
GGTTGACCATCGATGCCGACCTGCAAAAGTCGCCAAAAACAAAAACTACT
CTGTAAGTCTGAAGCGGCGCAACTGGGCAAAGAGTCATGATGATGAGGCC
ACCTCCACATGAAATCGAAGTTGCTGAATTTCGGAATCCTGCAAAGAGCA
CCCAAAATGTCACGAAGCAAGGGCTCCCAGACCAGTAGAGAAGGGTTTTG
GGCCGAAACAATGGCTTGCAGGTGGTGGTTGGGGCGTTGTCGCGACACGA
ATATTGTGATTCAGAACTCCGTATTAATTTCGAACTCTAAATCCAACATG
ATAAGTTCCCCTACTCAAAATTCAAGACAAAACAGAGAGGCGCTCGAATA
AAACCTGTGGTGTGAGTTAAGCCGGGGTTTCGAATGACATCAGCAGGGGA
CATCACGTAGAAGCGACATGTGTGTTGGCTAGCTCAAATCTTCCGCTGGG
GCTGTACTACTGCTGTATCGGTGGTTGAAAATATGTTGTACAGCAGTCGG
GACTCTGTCCGAATCTCGGCCCGCGATCAAACACCGTGCATGGTCTTCCA
CTGCTGTACTCACCCCCATGGGCCCCAATCTCCGGAACTTCGGGTCTACA
GCAGTAGCTCATACCACTTGCCGCCTAGGCCGACACTCAGTTCAGGAGAT
CGGGGCCCATGGCGGCAAGTACAGCAGTGGAAGATCACGTAGAATGTTCG
GTTTTGGGCTGAGATGCGGACGGTTTTTGGGCTGCTGCACCATATACCTT
CCACCACCGATATCTCAGCCCAATCAAAAGCTTTAAGGTTGCCAACACGC
ACGTCGCCTCTACAAGATGTATCCCACTGATGTCTTTAGAAACCCCGGCT
TTATTCTCGCGGGAAGGTCGATTTCTATTTTTGTACTGGATAAAGACAAT
AATTTTTTCGAAATTTAGTGCGGTTGGATAGGGTCCCTTACCGCATTCCT
TCGGAGAGCACAGAGCAACAAATCGCCCAGGAATCTCCAGAGATACAGGC
ATCTTGATGTTGTGCGTATCCGGCTACTGCTGTTAGATTGGATCGACACT
GCTCGTGCAGCAGGAGGCAGAAGGTTTACCAAAGGATAACAAGCTTTGGG
CGCGGAGTAATTAATGCCTGTACGGGGTTGTGGTTCTAGCGTTCTGTTTC
GTGTGAACAGCACTTATCTTAAACCCGGTGTACTCTGTACGTGATCCGGT
GTAGGCTGGTACACCTGTGGCTGGGTATCGGAGATGCGGCTGGGGAGTGT
GCGATACCGTAGGTGGACTCGGCGATGTTTCTCCTCTTCGGGCCCGATCG
CTGTCTGTCCTGGTGAGTTTCGACTGCCCGATCTACTGCTCAAATCGTCA
TTTCCGAAAGAAATGTAACTCGGATTTTGAATGTTAGATGCTGCTGCTGC
TGCTGCTGATGCTGCTGTTTTTCGTCGGGCGATTGACAAAAAGGGGTATA
CCCCTTACCTTTAGGAACAAAAGGGGTAGTGTGCCTGTCGTTGCCGCTGA
GCCGGGATGTTGCTCCTGCGCCATTACGCCTTTTTGTGCATCGGTGATCT
GAGTGAGAAAAAGGGGTCTCCTCCATTGAAAAACCCGCATCAGAAAATAA
TAGCCCAACATTTTGTTCGAGGTGCCCCAAGTGTAATGTGCCTATACTGT
ACCATGGACGTGTCAAATATTACTTCGGTCTGCTGCCTCATCTGTGCCCT
ACTAGCCCTGGTTCCCTGCTGGACATCTCCTGCTCGATTATTTGATCCGG
ATGCGGTGGGCTGCACATCAGCCTCTCCTTGCACATCCGCCTCGCTGTGT
ATACTGCATGAAAGGAATCACAGAGAAATACGTACGCACACACAAAATAC
CCTTTGCCCTTATTGTCTAATGACTCCCCTTCCCAGCGCCCAAACCAAAG
ACGCATCGCGTGAGGTTGTGATACCAGGAACGGGGCAACATGATGCACAC
GACGACATGCATTTGATAGCGCATTTCATACCTCTACTACCGCTGTATTA
GGGAATAGTGGTTTTTGTACTCGCAGCAACGATCAGATACTTGCATACGT
CCAAGCAAAACATAATATGGGATGACATCGGATATTGGTGGAAATTTGGA
GCGAGAATCGTGAATTTTTATATCACGCGTGGGTACGCAGGAGGCTACTA
CCTGGTCATCTTCTTGATCGGGGGTACTTGGCGAAGGTCGCATAGGTACG
CAGTCGCATGAAGACGAAACAGAAATTGACACGTGTATGGTACGCGCAAC
AAATTAGGTATTACACAGCGGCTTTATAAATTTCTGTGTGGATACGCAGC
CTGTTGTTGATTCCGCTGCGGAGGATTCAGCGAAAGGGAAGCTTCAATAA
ACAAAAGGGGGTAGACGGGGTAGGATCTGAACAAAAAGGGAGATTTGGAT
AAACAAAATGGGGTAGCATATAACTTTTTAGCAAACAAGGAGGTACACCC
CCTGGTTTCATCAACAAAAAGTGGCGCACCGTGAGTTCGTACTTTTTCGC
GCCCGAGAAAACACCATTCCCGGGTCTAAATAGACAAAAAAAAGGCTTTG
CGTGTTGCCTACACTCCGTGTCCGTCTCGCCGACGCACAGCACATCAAAC
CGGCGCGAAAAGCGCACTACCCCTTTTCGTGCCTAAAAGTAGGGGGTATA
CCCCTTTTTGTCAATTCCACTTTTTTCTTTCAGCGCCTTCGCTACACCTG
TCTCCACAGGACAACCATGACGCCCCCCTTTGTGAATATGCGTAGGGTTC
GGGCTGTATTCAATACTGGCGGACGTAATGACACTGTTTGTATGCAATTC
CCTTCGCACAAGGCCAAAAAGTGTCGGCGAAGATTCCCGCTGACATATGC
ATCCCTGTCTCCGTACCTCTATTACCGCCTTCTGGTCGTGAGCGGGTAGT
GTGGGAGGGACAGCTACGGAATATCGTGATTCTGGCGGTGTCGTATGTCT
CTTGTTCGTGGGGCAACGCAATTGGCAACCTTTTCGCCACACATGTACAA
TCGCATTTGGTGTCATACGTTTCACCGGTGTCAGGTTGAGCTCCTCGGTA
CCACCGCTTTCACAAGAAACCCACGACCAGGGCTTAAGGCCCCACTCTCC
TATGTGCTTTAATGCACACGCGAGAGCTGAGCATCGCCTGGCCCGTGGTA
GGATGACAGTGAAGCACTCAGTGACTGACGCTGAAGACGCGCTTGAAATG
TTTTTGCACGTCCCAAACACTACCTGCTGGAAGGCTTTGCATATTGTGCA
CACAGCAATATGTGGCTGCCCCATATATTTGATGGAAGGCCCTACTCGGG
GAGTCTAGATAATAACTGCTGCTTTTCCACGATACCCATGGCTGTACCGT
GTCCTGTTTGGTATGAGTGCCATGTTCACGAACGCCCTGCTTCATCACAG
GTGAAAAAACCTGCTGCTAACGTTTCCTGTGCCTGAGGGCGACGATACAC
ACAGCGGTACGAGATCTACCCAGCACGGTCTTACGCAACCAAAAAGAATG
CGAAATCCGTGAACAGTCAGTACGTAGTTTCACAAAGCGGCGTCCGTGCT
GTTGATGCAAAAGCCTTTTGCACTATATATATATAGATAGGATTTGGTGC
AGCAATTGCACTGCGCTTTTTTCGTAAGAAGGGCCGACCGTTACGTGCTG
AGTTCACTTTCCCCCCACCGCGGATTTCCCCATTGACCGAGTAAGCGCGT
GTTTGATAACCTCCGAGTTTCGGTACCTCCCCCGCTCGCGTACCATTCGT
CCATCTTACATTTGAAGCGACAAACGCCGAAATCACATGAACTAAACAAA
GTAGCGGTATTGTTGCTGAGCGTAACCCCCGCTCCCCCGCTCCCCCGCTC
TCCGTGCCTCTCGCGCCCCTCGCACCTCCACGCCTCCGTCATGTGCATCA
CATGCCACAGCACGAACAACGTCCGCAAAAGCGGCGGCGGCGGGGCCAAG
TGGCGTACTTCGGCCGTACCAGGCCTCTGTCATCGATCGTGCGGTGGAGC
TATACGGACAGGGGATTCGGCGGCTGCTGGTCCCGCTAGCAACAGGCCTC
GGCAAGACCGTCGTCTTCACGCACCTTCCTCAGGTAGATGTATATTTGTA
CGAAAACTCGTTGTTTCTTTGCCCCGCCTGTTGTCCTCACCTAGGCAGGC
GCGTCCCGAGCTGAGTGTGCCAGGCGAGAACCTTTTTGCGTCCACTACAT
TCGTTTTTTCATCTACATTCGATTTGCTGCGTCAGCATATTACGAAAGGA
TGCGCTGCAGATATTGCCGCCTCTCTCTCGCTAAGCCTGTTACAACGTAT
ACCGGAGAAACTGGGGCGCTAAATTTTTAATTTGGTCACAAAATTTCTCA
TGGCGCTTGGGTAGAGCATTCACGACACCCGCGAAATCCGTCGAAGGCAG
GGATATAGATCTGTTTTGCAGCATCTTTTTGTCGTTCTCCAAACCGTTGC
GGCTCCGTTCAACTACATGGTCACCACCTTTCCAGGCATCTTCCAGACTC
TGCGAAAAAGAAGGGAGAAAATTCTTCATCCTGCCGCAACTGCTGTTGCG
ATAGCAGTACCACATCTCTTTGTCGACGAAACTCTGTGATACCGTCAGTC
GGTCGTCTACGATTCCACTTGACGCATCCTTATTCGATCGGCTCCCGAAA
CCTACCCGATCGGTTCCTATTTCAACATTGCCATGACCTTGCCAGGCGTT
TCCCGAGCTCTGTCGAAGAGGGACTTTGGTCCTGGTTCACCGCGACGAGC
TCGTGCAGCAGGTGACGTTTTCATGCACGTTTTGTGTTTGGCTTTGCACA
GCGGGGTGCGATCCGCTCTTTCCGCCAGGTTCCTCGACAATGAGGAAGGG
GGAAGGCGGGTGCCAAAAAGTCGAGGCCGGGGGGCTCGAGAAATCTCTAC
GTTAGAAGAGTTATACCAACATTCATGTCACGCGCAACTGGTTGAAAAAA
CATATTAAATTTTGGGCGCGGAAACACATTCGACCGCACCTCTTCGTGCA
CCTACACTAAGCCAACAGTTGCCGAAAAGTGGTGTGCTTGTTCACCTCTA
CGCCTCAATAAACAGCACGGTTTTTTCCTTTTTTCATCCTGGAACTCCGG
CTAGCCTTGTGCAGTTTGTCTCTATCCCCCTGCCTTCAAAGCAACGGAGT
GGGTGGGCCGGAAAAAGGCACAACCCGCTTGTTGACCGCTCCCGAAGTTT
ACCAAACATTCGTAAAGCGCCCTTCCTGTTTTCTGTCCATCCGCATATAC
GAAGTATGACACTTCGTATCTCAAAAGCGCGCTGGCCGACTGACACTGTC
TAACCCCGCGACAACTCAGCGGCTTGAATCGTCGCAAATTCCTAGCGCCC
CCCGCCTCCCAGCAACAAAAAAAAGTTTTTCAGCAATCCGTTTCAGTAGA
CACATCTATGAAACGAACCTGCACCACTTGCTTGTTGTCGTTTTCGCGTG
CCTTTGATCTTTCCCCCGTATTGGGGCATTCTTGGTCAAAATCGTTTTTC
AAGGTGTGCTTGCGTCTTTTCTTGTTTTCGATTTCGTTAGTTTCATTTTC
CCCTGGATGGTTTCGTTGAAAGTTTCGGTAAGAATGATCCAAACCTTTAT
GTATGGTTGCTGCGTTTTTTCTTTTTTTCGATTTCGTTAGCTTCATTTTC
CCCTGATGATTTCGTTCAAAGTTTCAGTACGAAAGAGATCCAAACCTTTA
TTCATGTTTTTGCTTGGCCGTCCGTCTGTGCCCCCACCCAGGCGGTGGCC
TCCTTCGCCAAGTTCTTGCCGCATCTCACGGTCGGGGTTGAGAAGGGTCC
GGAAACAGCGCATGCGGGGTTAGATGTGGTGAGCGGTTCACGAAAGAAAA
GCTCAACATCGATTTTATCTGCTACTTGCTCATCATCGAGCTTGTGTGCT
ACTTTCTTGACATTTGCCCCCAGATTAGTCTCGTTGCAAGTATAATAGGG
CAACTTTTTTGGTCATCGTGAAAAAAACAAGCAGGACCTTGGTGTTTTGC
CCCGTAGAATGATGCAACAGAGAAAACGTGTTGCTCGTGAGCGTACGCCC
AAACATTACACAGCCATTTCTTGATGCCCATGCTTCTCCACGGCTCTGCG
GGTGCGTAGTGACGTTTAGGTTTTCAAGAAAGTACTGTCTTCAGCAGCGC
TGTTGCGACTGCTGTAACATACTTCCTACAGCACACACGTACACCTTGCA
AATCTCAGCAACCCAGTACTCTGTACAGCAGTGTACGTCCGCTTTCCAAC
TACACATGAAATTATTTGTTTAAGGACAGCAGGTTTGTGTCCCCAATGCA
TCCACTGGGAAGACTGACGACCCCCATCGTGTATTCCTTTTGATTATTTT
ATGTTCTGGCGTTGAATTGAACTCATTTGCTCCGTGCTTGGGACTCAACG
GTAGTTGTTCCATTCGTTTGCTGTGTTGTACTGCGCTCTCTCTCTTTCTA
TTACGAAACCAACAATCAGCTTGATGTTGCGTAGCTCGTTGTTCTGCCGA
TCGATCGCCGTGTTGTGTTTGGTGCACCATCGCCAACAGGTGGTGGCCTC
CGTGCAGACCCTGGGAAGGCGAGGGTCGGGGGCGACAAGACTCCGAAAGT
ATGCCGCCTACGGCGGCGTTGTTGTCGTTGACGAGGTAACCTCAAGCCGA
GACAAGAAGCGGTATCTGACCGTAAAGGGTGGCGGTCCTACCCGAAAAAG
CGGCCTTAATCGCACGGCGGTCTAAAGTGCGTAGTGGTCTAAACCGTCAG
GTGGTCGCAACCGAATACTTTTCAACATCTGTGAAAGTACAACAACAAAC
GGCGGCGTCGACGTCGTTCACGAGAAAAGCGGAAGACGTGACACGAAGCG
GTCGTTACCCTCAACAGTTTAACAGTCGGTGTGTTTTACCTTGTGATGAT
CTCAAGCCCGTGACGTGGTCTTACCTAAACGCTCACTTAACATACGTGAG
AGTGCGACAACTACGTCTGCGTCACTGTCGTCGGTGAGTTTAGCTCAAGC
CGTTTCATGCGGTCATGACGATGCAGTGCAGTGGTTTCAGCCCAAGCAAT
CTGTCATCCTTCATCTTGTTGTTCCAGTCGTAGAAGGGCGACGACTAAAG
CTCAAGCCTTGTTAGATGCCGTTTCAATAAACACCCGATCCTGTGTTCTG
TCGCGTGTCATACCCCACGCTTCACGAAGGCGCACCACGTTAAGGCTGGA
GGGATGTACGACGACGTTCTCAATGGGCTCGGTGTCGGCAGCGCTTGCAA
TGGGGACACTGCCAACGGCCGCCTCCTAGCAGGCTTCACCGCCACGCCGC
GAAGGTTGGGTGGCTCGCGTGGTGTGATAGGATTGGTCGACTGAAATCGG
TCGGCAGAGTACCCGTACCTTGTCGGTTGATATGTTTGGAAGGCTTCGGG
CAATATTTCATTTGTGACGGATGAGTCGATCCAATACTACGAAGTACGAA
GTATCAAGCAAGCAGGGTCGGCATATTGTTTTCCTGTTTCCCCGTTTCTC
CGTCATCTACACGCGTCGTCTCTTGGTGATATCGCTGCAGGGCGAAGGCC
TGAGGCGGCGGCCTCCCTGCCTGATCCCTCAGCCACAACTCGTTTGGCGT
TGGCGCGATTGATTGGTTGACGTTGACGTTGTTGGCCAAGCAATACCGAC
GCGATTGGTTGGTGTTGACGCGATTTGTTTTCCTGGGCGAACACGCCGCC
GTGACTCTTGTTGGTTTCGACCGAAGCGGACGGGCTGTGCCTGTGAGATG
CTGTGCTACGGGTGATTGCTGACTCTTTTGATTTTATGCCCCATCTTCAC
ATATTTTCTTTTGGCGGGTGTGCTGTCCCTGAGACTTTCCTTGTCTCCAG
GAGAGTTTGTCGGTTTACCCTTGTGGCACTGTTCTTCCTGTTTGTTCTTT
GACCCATCCGTCATGTGGGGCTCTTGTTGTTTCCGTTCAGAGCGGACGGG
CTGTCATTGCGGCCGTTCTTCGACCACAGCATCGGAGGACTGGACCTGCA
GTGGGGCATCGCGAACGGCTACCTCGTCGACATTCATGCGTACGCCGTCA
GGACCGCTACCGATATCGCCGCATTGCCCACGCGGATGCAAGCAAGTATT
TTTTGTTGTGGTACCGCCGCTGCTGCTGCTACTCCGAAACCTTACTGCTA
CTCTTGGTGTTGTTGTTCCACATCGTATCATTCCCCAACCAGAGACGAGG
CACCTGTTTACCCACAGGCAGGATCGCCACTGATATCTATCGCTGCGCTG
CAGCTTTGCGGTAGAGCGAGTCGACTTCTTCCGCTCTGGTTGGGTTGTAA
TGGTGTGAGTCGAGATCATTTTCCCACATTTTCCTCTTTCAACCGGTCAT
ATTACCCCACCAAATCCGGGCGGCCTGCCTCTTTGCCGAAGGTCTGACGC
TTGGGAACTTTCCCCGGAATTTTCCAGGATTTTGCTGGCGGCGCACTGTC
GACCGCTGTGAACAACGACGTCCGCAACGAGGCCGCTGCGCGCGCGATGC
TCGAGTTCGGTGCGGGGGAGTCGTGCTCTCGCGGCAAGAAGAGCCCTAGG
TGCGCGTGCGTGAAGACTATCATGAAACACACGGCGTGTGGCATACGGCA
TACGAACAGTTTATTCTGTCGAACCCCGGAATATTTATTTACCCCCCATC
GCGAGCGAGGCCTTGGTCATCCTGTTGTCTTGTCAGGTCGCAACTGCTAT
GTGTAGTAGTATTTCCACACCGCAGAGTAGGTGTCCGCCGTACTCGGCCA
CACCGGGAATCGCGAATATACATGTAGAAGGAGAGAGATTTACCTATGCC
TGTTTGCCTGGAGCAGGGGAATCGCGTTCTGTGCTGATGTCCGTCACGCG
CACGACCTTGCTCACGTCTTGAACGACCACAACATCACAGCCATGGCTGT
GGATGGAGGCATGAACAAGAAGGTGGGCAGCCGCTATCGAACGACGTAGT
AGGTGCTGCGTGGCAGCTGTGGTCGTTTGAAGTGGTGTTGGTGGCGTAAG
CGGTGCTGCCTATCGCGTCGGGCTATTTGCCGTTTGTGGATATCAACAGT
ATACTGTGCTCGAGTGTTGTTGTGTCTGGTTATGGAGGTGCTGCTATTGG
TAGTGATATTAATGTAATGTGTTGCGCTGTTGATTGAATGCATTTCTTCA
TTTTCGCGATTCCGGAAGGCACCATTCCACCGAGAATATGTCATCAATAA
CACGCGGCGTTTTCTTGCCACGGCCTGCATTTTTGCGAGGAGCGATTGGT
TATGAGCAACACAACAATAGCCACGTGAGCGTAAACATGCTTGCTGTGTT
TCCCTCTTGAGATGAGCTAGTGTGATGGACCATCAACAGAGACATAATGT
GAAGGATAACAACATCGATGACGATGATGACACCAACATCAACCGCGCCC
ATTGCCACGTGTGCTGTGTCGGCAATTCAGGACAGAGGCCGGGCGTTGTC
CGCGTTCCGGTCAGGGGAGGTTTCCACTCTTACCAACTGCGGCGTTCTCA
CAGAGGGCTTTGACGCGCCATTTTGCGACACGATAGTCATGTGAGGAGGA
CAAAACGCGAGATGTGCTGCTACCCATGTTGAGATACTAGCGCAGTATGA
TCGAAAAATGTTGCCCAAATATATAAAATAAATGGATGGATGCATCCATG
AGCTTGCTTTCGAAGAAAACGGTTGTGAAAATAATACTCGTACCTTTTTC
TATGACCCTCGCCCGTCCCTTCCGCTTCTCCTTGCAATACGTTGGACCCC
TTTGCACTAAACACGACACGTACGGCGCACGATTCGCGGAACGACGTTAC
GCCACGCTGCTCTGCCTCAGCCCCATCCCCCATCCGTCAAAGCTCCCCCA
CCCAAACAACCCCGCAGCAGGTTACAGGAAAGCAACTTCCACCTGCTTCC
TCCCCCCCCCCAAACTTAGGTGCCGCCCGACTCAGTCGGCTCCGTTGTAC
ATGCAGATGATCGGCCGTGGGACTCGTCCGTGGTTGCCGCCCACTCCCCA
AGGTGTGGTGGAGACTGGAGACCCAGAAAGAATCAAGAGCAGCCGTCCGC
GCCAACGTGTTTTTTTTACATGCGTGTAAATATCACTTGGCTTCGTTTGT
ATCAGCCCATTCGACTCGAGGGGGTAACGCGAGTGTTTCGTACGCTACGT
TGCTCCCGGATTGTTGGGCGGCCGAACAGCAAGTGCCGTCCCCCGCAATG
CTGGGGTCTCTTTCTTACCTTGCGTTTTGTCGCAGATGGGCGGCGTACGC
AGAAAGCGTGCTGAATTGAAGATATCTTTAAAGTATGCTGGTACTTCCGA
GGAGAATACTTGTTATTCATAGAGCGCAGAAACAACCTTGATGTACAGCA
TGGGGTACCATTCAACGTACTCGTCGTTCTTATTTTCTAAATTCCCCGGA
TGGAAGCTGTGTTGCAGTTTTCCTCTCCACTTATGGGTGTCGTTTCCAGT
TTCGAGGTACTCGTACCGCTGAGGTTTCGGTACACACCACAGCAACAAAA
ATGTGGCAATAAAGAGTGTTCACATGATACGTACATGATTGTGTGGGAGT
ATTTTGAGGCCACTTCGCCGTCCGAGCGCATGCTCCTCTGAATCTGGCAT
GGCACACGATCGCTCTCTCATCCCACCTCACAGTCTGAAATGACACATGT
TTCATTCGTAAAAATAGACTCCGCGGGGCATTGGGCGGACGGGGTATCCT
GCCCGAAGTGTAAAAGGATCCCGATTACTTTCTCCTGTTGCTATCTCCAC
CACCGCGACCGTCACCCCCACCCCCCCCTCAGGGGCGATGGGTGGCGGGA
CTAGTGCCGGTTCTATGGCCCCAGGACGACTAACTGCCATAGCAGGATCG
CCCAAACCTCGAATGCACGTGATCGACCTCGTCGACAACTGCGGAAAGCA
CAAGGTGAGTGAGAATACACAAATAAACGATGACTTGCTATTGGTCGCTG
GTAGCCGCTGTCGCTGTTGTTGACCTGTGCAGTCGTAATACGTATCATGC
GACTAGGCGCGGGTGTGTGGATGTGACGCTCCTTTAGACCAACTCGCAAC
GTGCTGCTCTCTACCGATCAACAACGGATGCCGCCTCAAATGGATAATAG
CGGAGCGGACACGTCGGTCGCACATCTACAATGTCTACCAGCCAATAAAG
CTGCCTTGAATAAATAAACACGGGGCGGGTAGACGCAACGCTCCTGTGTA
CAGACTCAATAAGGACTGACCGATCGAGCAGGTGATGAGCATGTCCACGG
CCCTCGGGCTTTCCTCAGAGTTTTGCGGCGATGAGGGCGGTGGGCTAGGG
ATGGCGTTCTCCGTGGAGGTGAGGTGAATTTTGTCACTATGTCATGGCGG
CGCGGAAATGCAAAGCTTTTCTTATTGGTGTTGTTTCTGCTGTCGGTGTT
GATGTTGTTTGTGTTGTTGTCGTTGTTGTAGGAGGTTGTGGTCGTAGTGT
TGTCGGACCGGTGTTTCTGGCGTGATGAATGCTGTTCACCTCCCCACCAC
ACCACTCACTTGACACGCCCTGCCCTCCACGACGCCTCGTCGGTGATATT
TGCAGCATGTGGGGGCTCTTGCGGCGGAGGCAATGTCATTGGTTGATGCC
GACGGTGCTGCTGAGGTAGGGGATGATTGCTCTCATCCCCTGCTGGAGGC
GAAAACGCCGCGCGAGTTGGCGCTGCTGGTCAAGCACTACCGCCTCCTTC
AGGTGTGGGGAGGCTAAGCGTTGCATAATCCTTGCTGGAATTGTGTTAAT
CCGTGCTTTCTTTGCCAGCACTTTACGGGGTTCGCGATTTATTCGAGTAT
AGCACATCGAATGAGGTTACAGTTTCCATGCTGTAGATACAAGCACTGAC
GGGTATGTTATTTCCATCCCTTGGTTCAGCGATCATTGCGTCCGAGTGCC
GTAGGTAGACTAGTGGGGTTGCACGTTTCAATGGGGGTCCGACCCGATGA
ATTTTTCTGCTGTTTTTTGTGTGTTTTATGCGAGGTAGCGGTGATCTCTG
TGCCGTACAGATAAAGCGCCAGGAAAGCTTCGACACGCGTTGTAAGCTTG
TAACCTCGCATGTGCACAAAGCTGTACTTCGTGTACGGTTTGAACATATT
GTCCGATGTTGTCAAGATCGTTGTAGTGATGCCTTAGACAGGGCCTGGGT
GGAGATGTTTTTGCCATCGTATGACGGACACCGTATGCGGCACAAAGCGA
CTCCCAGAATACAGAGTACGATACGTCGTTTTCCGCTGCGGTACAACAGC
AGTTGCTCACTGCCGCCGTAACCGTTCTCAATCGACCGGTGTCATTTTCA
GGGGGCGAAGAGCGGCGAGACATTGCTCACGATGGTGGGGCGGGAGGGGT
CAGAGAGGATGGCTCCATCCGGCTGGAACGTGTCTCAACTGTCCGTCGGA
GATCGCATTGGAAAGAACACTTTCTTGAGAGTGAGTTTTCATTCGGCTAT
TGGCTTTACTGCTGCTGCTGCTGTCGTTGTCGTTTCACTTGTCGTTCCAA
ATGTTGTTGATAGCCGTGCCGATCGAACAGAGCAAGGTTTCGGAGGTGGG
GCAGAAATTCCGCAGTGCTTCCGTATCCGTCACCCCCTCCCTCCTCCCCA
GGTTGTCGTGGAGACCATCGACGTGGGCTGTGAAGATGAAAGCGAGGGAG
ACGAATGCGACGATGACAATGACTTCGACGAATTCGACGATTTCGACGAA
AACCATGACGAAAACGACGGATACAATAAAATTCGGAAAACAACGAACCG
GCACTTAAACCGCCTCAACCATCAACCGCGACGATCACCACCACGGAGAA
AATCGAAGAGGAGAAATCCCTCGGTAGTTGCCGGTGCGACCGTACACATG
CGCCATCCGGCCTCGGACACGGCTTTCTCGTGGAGAACCGCGGGGGTCAA
AGACACGACCGGTACCGAGCTGCACGAAGGCGCGTCGTACCGCTTGGTGG
CGACGGTGAAAGATGTAGTGGCTGGGGTAGCGGGAGTGGCAGGCGGGGTG
GAGGTAACGAGGTGTCGTCTAACGCTGGTGACGCCGGACGCTACGTAGTT
TGTAGTTAAGGGAATGCTGTGCTTTATTTTAAGCATCTATATCCACTCCG
TCGTATTCAACCCTATTGTTCCCAGATCATTTATTGTTGCCGACCTCTGG
CACCATGTATTTTAACCTGGAGTTTGAACAGGCCTCGGTTTCAGAGGGTT
TTCATTGACGGCGGCGGTGGCGCGGGGGGCGAGTAGTCCACCCATACCCA
ACGGCGCCTTGCAACACGTGACAGATCTCCGACATTAAACATGGTGATTC
AAAAGAACAAGCAAACGTACACAGAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig198:31949..45574+ >mRNA_P-littoralis_Contig198.4.2 ID=mRNA_P-littoralis_Contig198.4.2|Name=mRNA_P-littoralis_Contig198.4.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2130bp|location=Sequence derived from alignment at P-littoralis_Contig198:31949..45574+ (Pylaiella littoralis U1_48) ATGCGGCTGGGGAGTGTGCGATACCGTAGGTGGACTCGGCGATGTTTCTC CTCTTCGGGCCCGATCGCTGTCTGTCCTGCACGAACAACGTCCGCAAAAG CGGCGGCGGCGGGGCCAAGTGGCGTACTTCGGCCGTACCAGGCCTCTGTC ATCGATCGTGCGGTGGAGCTATACGGACAGGGGATTCGGCGGCTGCTGGT CCCGCTAGCAACAGGCCTCGGCAAGACCGTCGTCTTCACGCACCTTCCTC AGGCGTTTCCCGAGCTCTGTCGAAGAGGGACTTTGGTCCTGGTTCACCGC GACGAGCTCGTGCAGCAGGCGGTGGCCTCCTTCGCCAAGTTCTTGCCGCA TCTCACGGTCGGGGTTGAGAAGGGTCCGGAAACAGCGCATGCGGGGTTAG ATGTGGTGGTGGCCTCCGTGCAGACCCTGGGAAGGCGAGGGTCGGGGGCG ACAAGACTCCGAAAGTATGCCGCCTACGGCGGCGTTGTTGTCGTTGACGA GGCGCACCACGTTAAGGCTGGAGGGATGTACGACGACGTTCTCAATGGGC TCGGTGTCGGCAGCGCTTGCAATGGGGACACTGCCAACGGCCGCCTCCTA GCAGGCTTCACCGCCACGCCGCGAAGAGCGGACGGGCTGTCATTGCGGCC GTTCTTCGACCACAGCATCGGAGGACTGGACCTGCAGTGGGGCATCGCGA ACGGCTACCTCGTCGACATTCATGCGTACGCCGTCAGGACCGCTACCGAT ATCGCCGCATTGCCCACGCGGATGCAAGATTTTGCTGGCGGCGCACTGTC GACCGCTGTGAACAACGACGTCCGCAACGAGGCCGCTGCGCGCGCGATGC TCGAGTTCGGTGCGGGGGAGTCGTGCTCTCGCGGCAAGAAGAGCCCTAGG GGAATCGCGTTCTGTGCTGATGTCCGTCACGCGCACGACCTTGCTCACGT CTTGAACGACCACAACATCACAGCCATGGCTGTGGATGGAGGCATGAACA AGAAGGACAGAGGCCGGGCGTTGTCCGCGTTCCGGTCAGGGGAGGTTTCC ACTCTTACCAACTGCGGCGTTCTCACAGAGGGCTTTGACGCGCCATTTTG CGACACGATAGTCATGTGCCGCCCGACTCAGTCGGCTCCGTTGTACATGC AGATGATCGGCCGTGGGACTCGTCCGTGGTTGCCGCCCACTCCCCAAGGG GCGATGGGTGGCGGGACTAGTGCCGGTTCTATGGCCCCAGGACGACTAAC TGCCATAGCAGGATCGCCCAAACCTCGAATGCACGTGATCGACCTCGTCG ACAACTGCGGAAAGCACAAGGTGATGAGCATGTCCACGGCCCTCGGGCTT TCCTCAGAGTTTTGCGGCGATGAGGGCGGTGGGCTAGGGATGGCGTTCTC CGTGGAGCATGTGGGGGCTCTTGCGGCGGAGGCAATGTCATTGGTTGATG CCGACGGTGCTGCTGAGGTAGGGGATGATTGCTCTCATCCCCTGCTGGAG GCGAAAACGCCGCGCGAGTTGGCGCTGCTGGTCAAGCACTACCGCCTCCT TCAGGGGGCGAAGAGCGGCGAGACATTGCTCACGATGGTGGGGCGGGAGG GGTCAGAGAGGATGGCTCCATCCGGCTGGAACGTGTCTCAACTGTCCGTC GGAGATCGCATTGGAAAGAACACTTTCTTGAGAGTTGTCGTGGAGACCAT CGACGTGGGCTGTGAAGATGAAAGCGAGGGAGACGAATGCGACGATGACA ATGACTTCGACGAATTCGACGATTTCGACGAAAACCATGACGAAAACGAC GGATACAATAAAATTCGGAAAACAACGAACCGGCACTTAAACCGCCTCAA CCATCAACCGCGACGATCACCACCACGGAGAAAATCGAAGAGGAGAAATC CCTCGGTAGTTGCCGGTGCGACCGTACACATGCGCCATCCGGCCTCGGAC ACGGCTTTCTCGTGGAGAACCGCGGGGGTCAAAGACACGACCGGTACCGA GCTGCACGAAGGCGCGTCGTACCGCTTGGTGGCGACGGTGAAAGATGTAG TGGCTGGGGTAGCGGGAGTGGCAGGCGGGGTGGAGGTAACGAGGTGTCGT CTAACGCTGGTGACGCCGGACGCTACGTAG back to top
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