mRNA_P-littoralis_Contig197.97.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig197.97.3
Unique NamemRNA_P-littoralis_Contig197.97.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: D8LS41_ECTSI (Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS41_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 4.350e-113
Identity = 235/401 (58.60%), Postives = 254/401 (63.34%), Query Frame = 3
Query:  336 RSVRRSSTTVVTEAMMRAVCGLLLLAVPSCTGFNSVP-THWRHRQQXXXXXXXXXXXXXXXXXXXXXXXXSSERAGTADGACTPTGATVVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSV--ACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAAAENASSS 1529
            RS  R STT V  A++ A C      +P    FNS+   H +H++                            R  TA G C   GA V LTREAGKNGKLAKLL DAGISS+EVPCIAHQDGPDLPLLPAALADPGL YVVVTSPEAAKVFL+GW+KAG P V V  ACVGKATGDALRA GV+P FTPSKATGETLAAEIPL P +  D +                                   RVLYPASAKAQ T+E+GL+ARGFEVRRLNTYDTVPATWDE+A AAAAGA+VAAFGSPSAVKTWAAR+GV   GV                 A          LAACIGETSARACREAGW ES IFYPEKPGMEGWAKAVG ALAA E   SS
Sbjct:    2 RSAYRPSTTAV--ALVAAAC------LPLAVSFNSIRIAHEQHQRHFGRSPEWHSGIIGRGETV------GHARPSTARG-CASRGAEVALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPSAPADDTXXXXXXX------XXXXXXXXXXXXXXXXXXXXGPRVLYPASAKAQNTLESGLRARGFEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMGVVAAGVXXXXXXXXXXXXXXXXGA----------LAACIGETSARACREAGWAESAIFYPEKPGMEGWAKAVGQALAAVETFPSS 371          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A835YHW0_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW0_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.180e-70
Identity = 160/307 (52.12%), Postives = 182/307 (59.28%), Query Frame = 3
Query:  585 TGATVVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALA 1505
            T  TV LTREAG NGKL  LL   GI+ +EVPCIA  DGPD   LP  LA     YV+VTSPE+AKVFL  W  A  P+VSVACVG ATGDALRA+G+ PAFTPS+A GE LAAEIPL PPSA        AVG                GG+         RVLYPAS +A  TV+ GL+ARGF V RLNTYDT  A W +   + AA AAVAAFGSPSAVK W + +GV                                A AACIG TSA+A + AGW +  IF+PEKPGM GWA+AV +ALA
Sbjct:   32 TSRTVALTREAGNNGKLEALLVAKGINCVEVPCIAFTDGPDSAQLPQHLASGAYDYVIVTSPESAKVFLQAWDAAERPNVSVACVGTATGDALRARGLEPAFTPSRAYGEDLAAEIPL-PPSA--------AVGE---------------GGAP--------RVLYPASTRAPGTVQEGLEARGFHVVRLNTYDTGAAAWSDADLSNAARAAVAAFGSPSAVKAWVSHMGVEA------------------------------AAAACIGVTSAKAAKAAGWADDRIFWPEKPGMPGWAQAVEEALA 276          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: L1JFY6_GUITC (Uroporphyrinogen-III synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFY6_GUITC)

HSP 1 Score: 204 bits (518), Expect = 6.840e-56
Identity = 142/313 (45.37%), Postives = 168/313 (53.67%), Query Frame = 3
Query:  597 VVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAAAENASSSSS 1535
            V LTRE GKN KL K L++ G+ ++E+PCIA + G D   LP+AL +    YVVVTSPEAA VFL  W  A  PS+ VACVG  T  AL+  G+ P F PSKATG+TLA E+P                            G +  G           RVLYPASAKA+  V+ GL ARGF V RLNTYDTV ATW E     AA AAV A  SPSAVKTWA R+G                                +  AACIGETSA AC+E G+    +F+PE PG+ GWA+AV DAL   E+A  S S
Sbjct:   24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALKE-DWEYVVVTSPEAASVFLDAWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP----------------------------GPQGNG-----------RVLYPASAKARTEVQGGLTARGFTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGT-------------------------------KQYAACIGETSASACKELGFEH--VFWPESPGIPGWAQAVHDALEEMESAEMSRS 263          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S0HHZ2_9CRYP (Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHZ2_9CRYP)

HSP 1 Score: 206 bits (523), Expect = 9.190e-56
Identity = 136/302 (45.03%), Postives = 163/302 (53.97%), Query Frame = 3
Query:  597 VVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDAL 1502
            V LTRE GKN KL K+L++ GI ++E+PCIA + G D   LP AL +    YVVVTSPEAA VFL  W +AG PS+ VACVG  T  AL+  G+ P F PSKATG+TLA E+P                                         ++  RVLYPASAKA+  V+ GL ARGF V RLNTYDTV ATW +      A AAV A  SPSAVKTWA R+G                                +  AACIGETSA AC+E G+    +F+PE PG+ GWA+AV DAL
Sbjct:   88 VALTRELGKNSKLEKVLSEKGIRTVELPCIAFEAGTDAETLPKALQEEW-EYVVVTSPEAASVFLDAWREAGEPSLPVACVGAGTKQALQEGGIEPVFMPSKATGKTLADELP---------------------------------------GPRRSGRVLYPASAKARTEVQGGLTARGFSVTRLNTYDTVSATWSDKELQMGASAAVIALASPSAVKTWAERLGT-------------------------------KQYAACIGETSAAACKELGFEH--VFWPESPGILGWAQAVHDAL 316          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S2PU27_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU27_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.250e-55
Identity = 141/316 (44.62%), Postives = 168/316 (53.16%), Query Frame = 3
Query:  597 VVLTREAGKNGKLAKLL-ADAGISSI------------EVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSV-SVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDAL 1502
            + LTRE GKNGKL K L +++ I  I            E+PCIAH DGPD  +L   L+     YV +TSPEAAKVF + W   G P V SVA VGKAT +AL+A G+  AF PSKAT  TL  E+P +  +  +                         G STSL        LYPASAKAQ T++ GL+ RGF V RLNTYDTV ATW     + A    VA F SPSAVK W          VK T   D  R                 ALAACIGETS  AC++ GW E  IFYPEKPG++GWA++V +AL
Sbjct:   63 IALTREEGKNGKLNKALQSNSNIKQIISSSSGSAMEVNEIPCIAHADGPDSDILGKTLSSSDFDYVAITSPEAAKVFATAWIDEGRPKVGSVAAVGKATQEALKAYGIDVAFVPSKATAATLVKELPTLEEATNE-------------------------GRSTSL--------LYPASAKAQDTLQNGLEERGFIVTRLNTYDTVTATWTPEEESLAKSTTVACFASPSAVKAW----------VKNTAQLDCPR-----------------ALAACIGETSFAACKKNGWKEEDIFYPEKPGIDGWAESVANAL 318          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S4JXA4_9STRA (Uroporphyrinogen-III synthase n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXA4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.390e-54
Identity = 147/333 (44.14%), Postives = 175/333 (52.55%), Query Frame = 3
Query:  543 SSERAGTADGAC---TPTGATVVLTREAGKNGKLAKLL------ADA-GISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVS-VACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAA 1508
            SS+ + +ADG     T     V LTRE GKN KL + L       DA  +   E+PCI H DG D   L   L +    YV VTSPEAA+V  S W  AG PS+  +A VGKATG+AL A G+   F PSKAT +TL  E+P   PS                      D A   G  T+L        LYPASAKA+ T++ GL+ RGF+V RL+TYDTVPA+W E     A  A VA F SPSAV  W          V+  GGE                G +G   AACIGETSA+ CR+ GW E  I+YPEKPG+EGWA AV DAL A
Sbjct:   41 SSDLSASADGETETETKEEVLVALTREDGKNSKLLRALLSHPRIGDAIPVDIEEIPCIEHADGDDYDRLGPTLKERSFDYVAVTSPEAARVLASAWEGAGRPSMGKIAAVGKATGEALIALGIEVDFVPSKATAKTLVEELP---PS----------------------DDATAEGRPTTL--------LYPASAKARPTLQNGLEGRGFDVTRLDTYDTVPASWSEDRTDLAREAGVACFASPSAVNAW----------VENLGGEG--------------EGCSGDVAAACIGETSAQGCRDMGWDEGDIYYPEKPGVEGWANAVADALEA 316          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: B8BVT8_THAPS (Uroporphyrinogen-III synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT8_THAPS)

HSP 1 Score: 198 bits (504), Expect = 3.990e-53
Identity = 140/315 (44.44%), Postives = 168/315 (53.33%), Query Frame = 3
Query:  597 VVLTREAGKNGKLAK-LLADAGISSI-----------EVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVS-VACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDAL 1502
            V LTRE GKN KL K LL++  I  +           E+PCI H DGPD   L   LA     YV +TSPEAAKV ++ W +AG P +  VA VGKAT ++L+  G+  AF PSKAT  TL  E+PL                          D A   G S++L         YPAS KA  T++ GL+ RGF+V RLNTYDTVPA+WDE     A  A VA F SPSAVK W          +K T G +  +P               RA AACIGETSA ACR+  W ES IFYPEKPG++GWA +V DAL
Sbjct:   67 VALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPLS-------------------------DAATKEGRSSTL--------FYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAW----------LKNTDGMN--KP--------------ARAKAACIGETSAEACRKNQWDESDIFYPEKPGVDGWAVSVADAL 322          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S2EAC0_TRICV (Uroporphyrinogen-III synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAC0_TRICV)

HSP 1 Score: 192 bits (489), Expect = 1.740e-50
Identity = 139/318 (43.71%), Postives = 167/318 (52.52%), Query Frame = 3
Query:  591 ATVVLTREAGKNGKLAKLL------ADA-GISSIEVPCIAHQDGPDLPLLPAALADPG----LTYVVVTSPEAAKVFLSGWSKAGNPSVS-VACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAA 1508
            A V LTRE GKN KL + L       DA  +   E+PCIAH DGPD  +L  AL+  G      YV VTSPEAA+V  + W  AG P +  V  VGKAT +AL  +G+   F PSKAT +TL  E+P         SGDA   G                         +L  +LYPASAKA+KT+E GL+ RGF V RL+TYDT+PATW       A    VA F SPSA+  W   +            ED +          G RG      AACIGETSA+ CR+ GW E  IFYPEKPG++GWA+AV DAL A
Sbjct:  113 AVVALTREDGKNAKLLRALLSHPRIGDAIPVDLEEIPCIAHADGPDSDMLGPALSGKGGFGAFDYVAVTSPEAARVLAAAWEAAGRPDLGEVVAVGKATEEALLREGIRVGFVPSKATAKTLVEELPE--------SGDATMEG-------------------------RLTTLLYPASAKAKKTLEQGLEERGFVVTRLDTYDTIPATWTPEKKNKADLVRVACFASPSAITGWLQNL------------EDTEG---------GRRGNT--IAAACIGETSAQMCRDMGWDEGNIFYPEKPGVDGWAEAVADALEA 374          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A1Z5JYL0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL0_FISSO)

HSP 1 Score: 188 bits (477), Expect = 7.550e-50
Identity = 129/301 (42.86%), Postives = 156/301 (51.83%), Query Frame = 3
Query:  606 TREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSV-SVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALA 1505
            TRE GKN +L K +    +  +E+PCIAH DGPD   L   L +    YV +TSPEAA+V  S W     P+  +V  VGKAT DAL+A G+  AF PSKAT E L  E+PL  PS                                  ++++  +VLYPAS +AQ T++ GL  RGF V RLNTYDTV A W+E     AA   +A F SPSAVK W          +  T   +A                    LAACIGETSA+ACRE GW E  IFYPEKPGMEGW  AV +A A
Sbjct:   52 TREQGKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPL--PS----------------------------------QQQQQPKVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGW----------LLNTENNNA-------------------VLAACIGETSAKACRERGWDEEHIFYPEKPGMEGWVNAVAEAAA 287          
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A1Z5JNA0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNA0_FISSO)

HSP 1 Score: 184 bits (467), Expect = 1.740e-48
Identity = 126/303 (41.58%), Postives = 149/303 (49.17%), Query Frame = 3
Query:  606 TREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAG---NPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALA 1505
            TRE GKN +L K +    ++ +E+PCIAH DGPD   L   L      YV +TSPEAA+V  S W        P  +V  VGKAT DAL+A G+T  F PSKAT E L  E+PL                                         +  RVLYPAS +AQ T++ GL  RGF V RLNTYDTV A W+E     AA   +A F SPSAVK W                E+  +                  LAACIGETSA+ACRE GW E  IFYP+KPGMEGW  AV +A A
Sbjct:   52 TREQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELPL--------------------------------------PSSQQPRVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGWLLNT------------ENNHQ-----------------VLAACIGETSAKACRERGWNEEHIFYPDKPGMEGWVDAVAEAAA 287          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS41_ECTSI4.350e-11358.60Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus T... [more]
A0A835YHW0_9STRA1.180e-7052.12Uroporphyrinogen-III synthase n=1 Tax=Tribonema mi... [more]
L1JFY6_GUITC6.840e-5645.37Uroporphyrinogen-III synthase n=2 Tax=Guillardia t... [more]
A0A7S0HHZ2_9CRYP9.190e-5645.03Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi ... [more]
A0A7S2PU27_9STRA4.250e-5544.62Uroporphyrinogen-III synthase n=1 Tax=Skeletonema ... [more]
A0A7S4JXA4_9STRA1.390e-5444.14Uroporphyrinogen-III synthase n=3 Tax=Odontella au... [more]
B8BVT8_THAPS3.990e-5344.44Uroporphyrinogen-III synthase n=1 Tax=Thalassiosir... [more]
A0A7S2EAC0_TRICV1.740e-5043.71Uroporphyrinogen-III synthase n=1 Tax=Trieres chin... [more]
A0A1Z5JYL0_FISSO7.550e-5042.86Uroporphyrinogen-III synthase n=1 Tax=Fistulifera ... [more]
A0A1Z5JNA0_FISSO1.740e-4841.58Uroporphyrinogen-III synthase n=1 Tax=Fistulifera ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:410407..416271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LS41
Preferred nameUROS
PFAMsHEM4
Model size2801
Max annot lvl2759|Eukaryota
KEGG rclassRC01861
KEGG koko:K01719
KEGG ReactionR03165
KEGG Pathwayko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120
KEGG ModuleM00121
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0004852,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006725,GO:0006778,GO:0006779,GO:0006780,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009536,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046502,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons6
Evalue8.18e-120
EggNOG OGsCOG1587@1|root,2QST9@2759|Eukaryota
Ec32 ortholog descriptionuroporphyrinogen synthase, putative chloroplast precursor
Ec32 orthologEc-12_004890.1
EC4.2.1.75
Descriptionuroporphyrinogen III biosynthetic process
Cds size1335
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.97.3prot_P-littoralis_Contig197.97.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig197 411646..415384 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789947.0196512-UTR-P-littoralis_Contig197:410406..4116451680789947.0196512-UTR-P-littoralis_Contig197:410406..411645Pylaiella littoralis U1_48UTRP-littoralis_Contig197 410407..411645 -
1680789947.0724804-UTR-P-littoralis_Contig197:415384..4154091680789947.0724804-UTR-P-littoralis_Contig197:415384..415409Pylaiella littoralis U1_48UTRP-littoralis_Contig197 415385..415409 -
1680789947.0808332-UTR-P-littoralis_Contig197:415756..4158741680789947.0808332-UTR-P-littoralis_Contig197:415756..415874Pylaiella littoralis U1_48UTRP-littoralis_Contig197 415757..415874 -
1680789947.0893655-UTR-P-littoralis_Contig197:416187..4162711680789947.0893655-UTR-P-littoralis_Contig197:416187..416271Pylaiella littoralis U1_48UTRP-littoralis_Contig197 416188..416271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789947.032154-CDS-P-littoralis_Contig197:411645..4125331680789947.032154-CDS-P-littoralis_Contig197:411645..412533Pylaiella littoralis U1_48CDSP-littoralis_Contig197 411646..412533 -
1680789947.0411668-CDS-P-littoralis_Contig197:412977..4130631680789947.0411668-CDS-P-littoralis_Contig197:412977..413063Pylaiella littoralis U1_48CDSP-littoralis_Contig197 412978..413063 -
1680789947.0499425-CDS-P-littoralis_Contig197:413622..4138841680789947.0499425-CDS-P-littoralis_Contig197:413622..413884Pylaiella littoralis U1_48CDSP-littoralis_Contig197 413623..413884 -
1680789947.0613294-CDS-P-littoralis_Contig197:415285..4153841680789947.0613294-CDS-P-littoralis_Contig197:415285..415384Pylaiella littoralis U1_48CDSP-littoralis_Contig197 415286..415384 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig197.97.3

>prot_P-littoralis_Contig197.97.3 ID=prot_P-littoralis_Contig197.97.3|Name=mRNA_P-littoralis_Contig197.97.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=445bp
MFPRPPKAALAPSSAGSTHYRLPAGYMSSCRPLHAGRSVRRSSTTVVTEA
MMRAVCGLLLLAVPSCTGFNSVPTHWRHRQQHYHRHHASDRRSSSSVVSS
RGGKSSSERAGTADGACTPTGATVVLTREAGKNGKLAKLLADAGISSIEV
PCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVS
VACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAA
AVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQ
ARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGV
ATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAG
WPESTIFYPEKPGMEGWAKAVGDALAAAENASSSSSATVATALA*
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mRNA from alignment at P-littoralis_Contig197:410407..416271-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig197.97.3 ID=mRNA_P-littoralis_Contig197.97.3|Name=mRNA_P-littoralis_Contig197.97.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5865bp|location=Sequence derived from alignment at P-littoralis_Contig197:410407..416271- (Pylaiella littoralis U1_48)
CCGCTCCTCCTCCTCCCTGGCTGCTGTCATCACCGGTAGACGACCGCAAG GCGAATGACACTCGTAGCGGTGACCCGGCAACAGGTGAAGGTGGTCTAGC GGAGACAAGACCTCCTACTCTATTGTTGTTGCATGCATGTCGACCACCGC TCGTTGTTGTTGCTGTTGACGTTGACGTTGCTCTTCCCGAGATTCCGCCG AACGCTTGGGATAGCGACACGCATGAGAGAAGTACCAGCAAGCTTGTCAA GACACGGGCGCCCGAAGCGTGTCTAGTCATGCTCGACGCCTGCGTGTCCA GACGAAAAATGTTGACGTCTCTCTCCAATATCATGGCTTGGGGGCGTCGT GGGTGTTTTTGTTTTCCTCACGATGCCCCCCGCCTTCCCTGCTGCAGCTG GTTTCCTCCAGCCTCTTCCTCTTCTTCGAACTCTCTGTTCTGCGGGACCC TAGGAGATCCTCCACGACAACGCACTTGCTGTCCTACATGTTGCTGGTGC AGACGGCCGAATGAGGTGAGGGGGAAACTTCGAGCACATCACACATCCTC GTGGCATTTGCGTTCCAAATGTGTGAACGGCTACACAGGCCCTAAACAGG CTCCGTGTATACAGGCTCTGTGTGCTGTGAACTAAGAAACGAACACTTGA ACTTGTGAGACCGGATTGGAGGCCCAACAAACAATCCTGTCGCTAATGAA TGCAGCAGCTTTTTGACGGCAATGGCCGTTTTCGCGTTAATGTTTACTCT CGGGTGGGGCATTTGCAACTTATAGCTGGTCTGCTTTTCAAAAGAATGGA CATGCATGCAACCCTTTTAGGGAACAAATGCGGTTGATTAACACCCGCCC CTACAAACCAAGGTGAAAGGCACACAGGCAGGCGCACATGTTCCCACGTC CCCCGAAAGCCGCGCTGGCGCCGAGCTCAGCGGGCAGTACCCACTACCGA CTGCCAGCTGGCTACATGAGTTCATGCCGGCCATTGGCGAGTATTTATGT GTGTGTTCTGGGGATGTGAGTGCGTGTGGGTGGCCATACAGCAGTGCATG TTAGCGATCAGCACGTGTATGTATTGTGGGTGTGTGGGCAGAAGTGTCGG TTGTCTGCTGCTTGCAGCTATTCCTGGCTGCGTGCGTGCGTTTGTCGGCC CCTTCGGACGAGTTGTACGTCCTGCCTCACTGCCGTGTACACAGCTTTTG GCCGTTTCATCAAACCGCCTTCAGTTTTCTCGCGAAATCCTGTTTCCGAT TTGTCCGATTCCCAAGAATCAACCTTCCGAGGGGTTGATTTGTCAAGGAA AAAGCTAGGCAACTCCGTTGGATCCAAAAGCTATGATAACACCATGTGGA CGATTTTGGTACCCTGTGACGAATCGGAGGCAATCCCATTTCCAATTAGC TCTCCAATCCGGGTGCCATACTTTTCGTTGAAACAGGCCCTCATTACAGA CTCCGATGAGTTCGGGAACGCCAAGTTCACGGACCCGTGGGACATGGGCA ACGCGATCACGAACGTGCCCGAGCGCGTGGACTCCTTGAGACGTGCCGGG AGTTTCCCCGAGCGGAGCATAATCAAGCTCTGTCTTGGCATCAAGGAGGG TCTGCGAATGCTATAACAGTAGATTCACGGATAATTTTGGGTCTTCGCCG ACGCGCGGTCACGAAGGTGGCCGAGCGCGTGGGCAAAATACACGAAATGT GTGCCAAGATATTCCCCGCGCGCTGCACCGCTTTGTATATGCGGAGCATA CCATAAACGAGCTCCCTATTGGCGGGCATAGCTTGTTTATTCGCATTTGC TTTTGTCAACCCCGTTGATGCCAAAACAGAGCTTGTTTACGCTCAGTCCC TCGCGGTGCAGCGCGACGACAACACTCTGGAACATCTCGTTCATTCTGGA CACGTGCTTGGTCACCTTCGTGGCGATGGCGAGGTCCCACGTATCCGTGA ACTACTCGAACTACTCGTAGCACTCCCCGAACTCCACGGAGCAGTCTGTG ATGACCGGCTGTGAAGCCGTTCGCAAAATGGCCAAACACGAATAATGACT TCAGCGAAAGAAAATGAGACACGAGGTTGTGTGTGATGCTCTTGAACTTT TTGTTGGTCGCATCGCGCTCCATTCAAGTGCTAAATACGAGAAAGAGCTA CCCTGCACGTCAGTGTACTCGCGCTCTACACATAAACGAACATGCGCCAC CATCTTCATCTCGATGCACCTGCGGCAGGTTTGTTTTTTGTGCAGACTGG CTGCTGCTCAAGCACTACGGCTGCTTGCTACGGAGTATATCTCATCGTTT TCATTTTTGATCCCTCTCCGTTGTTCGGTACTCAGTTCTCAATCACCACC GCGTTCGTCCACTGCATTCCATTCCGTTATTCGAAAGCACGCAGGCAGGT CTGTACGGCGCTCGTCAACAACGGTAGTTACAGAAGCAATGATGAGAGCT GTCTGCGGCCTCCTGCTGCTAGCGGTGCCGAGCTGCACAGGCTTCAACTC GGTTCCAACCCATTGGCGCCATCGTCAGCAGCACTATCACCGCCACCATG CCTCGGATCGCCGGAGCAGCAGTAGTGTCGTCAGCAGCCGTGGCGGGAAG AGTAGCTCCGAGAGGGCTGGCACAGCGGACGGTGCATGCACCCCAACAGG TGACACAGCAGCAGTCAAACGAAGTACGCTATCGTTCATATTATACGGAT CGGGTTGTGGTACCGCCGGTTCCCGCATCAAATCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCGTCTCGCTCTTCCTCC CACGTCCGTATCGCGCGCTGAGTTTGGGACTGAAGTCGCTCCTATCGAAG GTCGCTGCTATCGACTGGAAAACATGTATCCGCCTATTTATCGCAGGGAG ACTACTGTTTTTGTACTACTACGGCTGTGCGACATCGCACTCGTAAAATG TTGGCAATTGCTGGAGCAAAACACTCAATACCGCAGCAGCTTCCACTCAC GCGCTGCAATTTGAGGGAACAACACCCGCACACGAAAGACTAAACGTGTG TACGACTTGAGTATTATTGGTCATTACACGGCTGCGTGCTGCTGTGATGG TTTTTTCATTTCACCATCCTCATATGTATCGGCACGCCGCTCGCATTAGA CGGCCGATCTGTCCCGTCATCGATGTGCCTCATCTTTCGTGTGCGCATCT GGTGTCAGGAGCAACGGTGGTTCTGACCAGAGAGGCCGGGAAGAACGGGA AGCTCGCTAAGCTCTTGGCGGATGCGGGCATTTCCAGCATTGAGGTGAGA TTGGGAGGGCTGGGCGGGCGGGCATGGAGGGTAGACCCGTGGGGGGGGCG CACCGCGTTGCATGCACGAATGTTCGTCGCCTATTCTTCAAATTGCCCTC CGAACGTGATGTTTCTTTAAACATGATAAAAATGCATGTGACCGACCACC CCATGAAATGGAACGCGCTCCTTTTCACCAACTATATCTACCCCGGACCC TTCCGCCGCTGCGGCCTTTGCCCTGGTGCCGACACCACCACCAGCAACAC AGCAGTACAACAGCATTACGAGCATGTTTCCCAAAAAAATCAGTACCAGG TACAGATTATTTTCGGCATTTGCCTTTGAAGTGTTCGTTGATATGATACA GCAGTACAGCAGTAACGTCATACCATACGCAAGAATGAACAGCCAGTGTG TTCTTCCCCCGCACCCCGAAATTGCAACAACTATACAGGTCCCCTGCATC GCACACCAGGACGGACCAGATTTGCCTCTGTTGCCGGCCGCCCTGGCCGA CCCGGGCCTCACGTACGTCGTGGTCACCTCACCGGAGGCGGCCAAGGTGT TCTTGTCAGGCTGGTCGAAGGCCGGAAATCCTTCCGTCTCTGTTGCCTGC GTCGGCAAGGCCACAGGCGACGCGCTCCGCGCGAAGGGCGTCACGCCCGC GTTCACGCCGTCCAAGGCAACCGGCGAGACCCTGGCGGCGGAAATACCTC TAGTCCCTCCTTCTGCCGGCGATATTAGCGGTGACGCTGCTGCAGTAGGA GCGGCGGCGGCGGCGGCGGTGGAAGGAGTGGATGGCGCCGAAGTGGTTGG AGGGTCGACGTCGCTAGAAGAAAAAAAACTCTTGCGCGTGCTCTACCCGG CCTCCGCGAAGGCGCAGAAGACGGTGGAGACGGGGCTTCAGGCCAGGGGC TTCGAAGTGCGCCGGCTGAACACGTATGACACGGTGCCGGCGACCTGGGA CGAGACCGCCGGGGCGGCGGCAGCGGGAGCGGCGGTGGCGGCGTTCGGGA GCCCGAGCGCCGTCAAGACGTGGGCGGCGCGGGTGGGGGTTGCCACCAAC GGAGTAAAAGGGACTGGTGGAGAAGACGCACAAAGACCCGACGCCACAGA CGCAGACGCCACCGGGACACGTGGTGGTGCCGGGCGGGCGCTGGCCGCTT GCATAGGGGAGACGAGCGCAAGGGCGTGTCGAGAGGCCGGGTGGCCGGAG TCGACGATTTTTTACCCCGAGAAGCCCGGGATGGAGGGATGGGCGAAGGC TGTCGGTGATGCATTGGCAGCGGCGGAAAACGCCTCCTCCTCCTCCTCGG CTACTGTTGCAACTGCTCTGGCTTGACGGTGACACACATCCGTACGCCCG CACCGATAGCCTTTCGTTCTTTTCATTTGGAAACGTTCGTTGACTCAAGA GAACTGCAATAGCCATGGAGTTCTTATACTGCCACCGGCAGTCGGGAGGA GTTGGCATTTCCACACCACGCGCTTGGCGGTTTAGCGTCGTGGCTTGCGG GAGGAGATGGGTGCGCGGGTCAGAGAGTATCATGACTACCGTAGCTAGTA TCATAGCACGATTTGTGGGAATGCGCAGATTGTTTTGCAGGGATCTTCAA TTAATACTTGGTATACATTTTTTCGTTTGCTCGTGGTGCTGCCCTTTTGA TGAGACTTCAAACCGCTTTGCCCACCGCTGCTGCTCTCGCAGAACTCATT CACATCATGGGGCAGGTGGCCCGTAGTCTCGGCAGATTGACGCCGCGGGA CGCTCGACTGACAGGTGGCGACAAGAAAAAGGTGACGATGAACGGAGTGA CCACTCTGTACATGTTCTTCAGCATCGGCTCTCCCTCGTGTGCTACCGTC CGGACGAGCACTTTTTTTTGTACCCTGTTTATTCTGTACACCGCCGCATC TTCTTTCTCCCGTCCCAAACCTTCAGCCACTACGACAGAGAGCAAAGCGG GTGGTGTGAAATAAAAACAGGCATATGAAAGTTTTCTTTGTCAAGGGGAG AACGTACACAAAGTAATTTGCAGTGAAGAGGAAGCATGGCCTCGAACGCC ATCCAGCCCACCAGTTACAGCAGCACCAGCGGCTCGCGAAGCCGCGGCGC CTTCACACAAGGGGACACAGGGGGAATCGGTTACAATATTTTACCGTGGA ATCAAACTTATCTTCACCTTTAGCTTTACAAATCGAATGGTCAGGGTAGC GCTTCCGTCGTGGAAAAAATAGCCTGCTTCCCTCTGACCGGAAGCTGTTC CTACGGAATACTTTTGGGTTACCAAACAAACCTTTGAGCACCACTGTTTC AATGCCGTCGCTCCCGCTCGCCCTGGATAACCACTGCTAAGAACGTTCGA GCGTTTTCCTCGATGCACCTCCACAAAACTCAAGAACACAACAAAACAGG CATGTTGAGGAAAGGCGCGAACAAGAGGACCACGCATAGGGCGACTGCCC TGCTCAACCGAAAGGCAAAACGTGGCTCGCCTGTATACGAGATCCCCGCA CCGATCAACCCCTCCCCCCCCCCACACAGGCACCCTTCATAATAATGCCT CTGCTATCCGCTCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig197:410407..416271-

>mRNA_P-littoralis_Contig197.97.3 ID=mRNA_P-littoralis_Contig197.97.3|Name=mRNA_P-littoralis_Contig197.97.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1335bp|location=Sequence derived from alignment at P-littoralis_Contig197:410407..416271- (Pylaiella littoralis U1_48)
ATGTTCCCACGTCCCCCGAAAGCCGCGCTGGCGCCGAGCTCAGCGGGCAG
TACCCACTACCGACTGCCAGCTGGCTACATGAGTTCATGCCGGCCATTGC
ACGCAGGCAGGTCTGTACGGCGCTCGTCAACAACGGTAGTTACAGAAGCA
ATGATGAGAGCTGTCTGCGGCCTCCTGCTGCTAGCGGTGCCGAGCTGCAC
AGGCTTCAACTCGGTTCCAACCCATTGGCGCCATCGTCAGCAGCACTATC
ACCGCCACCATGCCTCGGATCGCCGGAGCAGCAGTAGTGTCGTCAGCAGC
CGTGGCGGGAAGAGTAGCTCCGAGAGGGCTGGCACAGCGGACGGTGCATG
CACCCCAACAGGAGCAACGGTGGTTCTGACCAGAGAGGCCGGGAAGAACG
GGAAGCTCGCTAAGCTCTTGGCGGATGCGGGCATTTCCAGCATTGAGGTC
CCCTGCATCGCACACCAGGACGGACCAGATTTGCCTCTGTTGCCGGCCGC
CCTGGCCGACCCGGGCCTCACGTACGTCGTGGTCACCTCACCGGAGGCGG
CCAAGGTGTTCTTGTCAGGCTGGTCGAAGGCCGGAAATCCTTCCGTCTCT
GTTGCCTGCGTCGGCAAGGCCACAGGCGACGCGCTCCGCGCGAAGGGCGT
CACGCCCGCGTTCACGCCGTCCAAGGCAACCGGCGAGACCCTGGCGGCGG
AAATACCTCTAGTCCCTCCTTCTGCCGGCGATATTAGCGGTGACGCTGCT
GCAGTAGGAGCGGCGGCGGCGGCGGCGGTGGAAGGAGTGGATGGCGCCGA
AGTGGTTGGAGGGTCGACGTCGCTAGAAGAAAAAAAACTCTTGCGCGTGC
TCTACCCGGCCTCCGCGAAGGCGCAGAAGACGGTGGAGACGGGGCTTCAG
GCCAGGGGCTTCGAAGTGCGCCGGCTGAACACGTATGACACGGTGCCGGC
GACCTGGGACGAGACCGCCGGGGCGGCGGCAGCGGGAGCGGCGGTGGCGG
CGTTCGGGAGCCCGAGCGCCGTCAAGACGTGGGCGGCGCGGGTGGGGGTT
GCCACCAACGGAGTAAAAGGGACTGGTGGAGAAGACGCACAAAGACCCGA
CGCCACAGACGCAGACGCCACCGGGACACGTGGTGGTGCCGGGCGGGCGC
TGGCCGCTTGCATAGGGGAGACGAGCGCAAGGGCGTGTCGAGAGGCCGGG
TGGCCGGAGTCGACGATTTTTTACCCCGAGAAGCCCGGGATGGAGGGATG
GGCGAAGGCTGTCGGTGATGCATTGGCAGCGGCGGAAAACGCCTCCTCCT
CCTCCTCGGCTACTGTTGCAACTGCTCTGGCTTGA
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