mRNA_P-littoralis_Contig197.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: D8LKY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY0_ECTSI) HSP 1 Score: 393 bits (1010), Expect = 1.680e-130 Identity = 245/346 (70.81%), Postives = 259/346 (74.86%), Query Frame = 1
Query: 532 MSRHGRSSNFGGMQRTAASLLTLAVLAGLCSMASCFVASSSPATTTLVSRRHCRADRSCSSXXXXXXSRGVRHRTATKSNTSSMLQGRARG-LIRRQRLSCWSPG-GEGEIASASCSXXXXXXXXGSSAPNADGAVEGGDGIGLAIAAMGAPPSLLSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
M R GR+S G +RTA LL LAVLAG+ S+AS FVAS++ R R SS R A T SML ARG L RRQR SC+ G GEG ++ + NA G E G G G IA G PSL SSQS APARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQ+QGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAER+ELLTVVLPQSLEKQS ASRELIQKVTNVVTNP+NDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARS+NMIVTELYLD
Sbjct: 1 MGRRGRASTLTGTKRTAC-LLVLAVLAGVLSIASSFVASNAAIAFG-------RQGRDSSSGT----------RAAPPQGTGSMLLEGARGKLTRRQRSSCFGTGDGEGTSSAVPAAGGKN---------NARG--ERGAGAGGGIAPAGRQPSL-SSQSAAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSAASRELIQKVTNVVTNPVNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 316
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A835ZAP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP1_9STRA) HSP 1 Score: 286 bits (733), Expect = 1.460e-90 Identity = 151/198 (76.26%), Postives = 166/198 (83.84%), Query Frame = 1
Query: 970 MGAPPSLLSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
+G P L S Q P +IPT VAVVG PQ VEKEYSI+ ILKELAEIQ QGPKN C+LGTRHCSFLHQQIIELLAYALVLSGNHVFTSGA GTNAATIRGALRAER +LLTVVLPQSL KQS S+EL+ +V NV+ P NDHLPLD ASRLCNSDLLSR +QLICFAFHDS TIIET +EAR+++MIVTEL+LD
Sbjct: 2 VGNTPELSSPQ---PTTVKIPTKVAVVGRPQIRVEKEYSIDTILKELAEIQRQGPKNYCILGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAGGTNAATIRGALRAERPDLLTVVLPQSLAKQSDESQELLTQVQNVIDAPQNDHLPLDVASRLCNSDLLSRADQLICFAFHDSHTIIETAREARALDMIVTELFLD 196
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7R9YDI6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDI6_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.080e-71 Identity = 127/180 (70.56%), Postives = 145/180 (80.56%), Query Frame = 1
Query: 1027 IPTDVAVVGAPQQVVE-KEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
IP V +VG PQ V K Y+I++ILKELA IQ QGPK+ C+LGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGALRA +LLTVVLPQS+ KQ S++L+ KV NVV ND L LD ASRLCNSDLLSR EQLI FAFH+S+T+IE TKEA+S +M+VT LYLD
Sbjct: 62 IPDVVPIVGEPQAVFTGKNYTIDSILKELAAIQQQGPKSYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTNAAAIRGALRAGAPDLLTVVLPQSISKQPAESQKLLAKVKNVVEMSQNDGLGLDMASRLCNSDLLSRAEQLIAFAFHNSRTVIEATKEAQSRDMVVTVLYLD 241
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A6V2EYW5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EYW5_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.670e-71 Identity = 122/173 (70.52%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1048 VGAPQQ-VVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
VG PQ+ V+EKE S+ +ILKELA IQ QGP+ CVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ+ S+EL++ VT++VT P ND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE +KEA+ ++M+VT LYLD
Sbjct: 104 VGDPQKLVIEKEMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLNKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 276
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7R9WLF4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLF4_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.850e-71 Identity = 124/183 (67.76%), Postives = 152/183 (83.06%), Query Frame = 1
Query: 1018 RTEIPTDVAVVGAPQ-QVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
R E+ + A VG PQ +V EKE S+ ILKELA IQ QGP+ C+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAERE+LLTVVLPQSLEKQ S+EL++KV +++ P ND + LD ASR+CNS LLS+T+QLI FAFH+S T+IE TKEA++++M+VT L+LD
Sbjct: 141 RLELQRETANVGKPQLRVKEKEQSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAEREDLLTVVLPQSLEKQPKESQELLEKVDDLIEMPQNDGMSLDVASRICNSYLLSQTDQLISFAFHESTTVIEATKEAKTLDMLVTTLFLD 323
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7S2XNC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNC9_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.120e-70 Identity = 122/175 (69.71%), Postives = 149/175 (85.14%), Query Frame = 1
Query: 1045 VVGAPQQ--VVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
+VG PQ+ V EKE+S+ AILKELA IQ QGP+ CVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER +LLTVV+PQSL KQ+ S+EL++ VT+++T P ND + LD ASR+CNS LLS+++QLI FAFH+S T+IE TKEA+ ++M+VT LYLD
Sbjct: 130 LVGDPQRKMVKEKEWSVSAILKELAAIQQQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAERPDLLTVVVPQSLGKQAKESQELLKDVTDLITMPQNDDMSLDVASRICNSYLLSQSDQLISFAFHESTTVIEATKEAKELDMLVTTLYLD 304
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7S2I159_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I159_9STRA) HSP 1 Score: 236 bits (603), Expect = 1.360e-69 Identity = 120/173 (69.36%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1048 VGAPQQVVEKE-YSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
VG PQ+++EK+ S+ +ILKELA IQ QGP+ CVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ+ S+EL++ VT++VT P ND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE +KEA+ ++M+VT LYLD
Sbjct: 147 VGDPQKLLEKKSMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLHKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 319
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7S2RK03_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RK03_9STRA) HSP 1 Score: 233 bits (594), Expect = 6.120e-69 Identity = 115/174 (66.09%), Postives = 145/174 (83.33%), Query Frame = 1
Query: 1045 VVGAPQQ-VVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
+VG PQ+ +++KE S+ AILKELA IQ QGP+ C+LGTRHCSFLHQQI+ELL+YALVLS NHV+TSGA GTNAA IRGALRAER +LLTV+LPQS+ KQ P S++L+ VT+++ P ND + LD ASR+CNS LLS T+QLI FAFH+S T+IE T+EA+ +NM+VT+LYLD
Sbjct: 96 LVGDPQKKILKKEKSVTAILKELAAIQQQGPQKYCILGTRHCSFLHQQIVELLSYALVLSENHVYTSGACGTNAAAIRGALRAERPDLLTVILPQSVGKQPPDSQDLLGGVTDLIAMPQNDEMNLDVASRICNSKLLSETDQLIAFAFHESTTVIEATREAKELNMLVTKLYLD 269
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A448ZCS9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCS9_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.180e-68 Identity = 119/173 (68.79%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 1048 VGAPQ-QVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
VG PQ +V K+ S+ ILKELA IQ QGP+ C+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAAT+RGALRAERE+LLTVVLPQSL KQ+ S+EL++KV +++T P ND L LD ASR+CNS LLS T+QL+ FAFH+S T+IE +KEA+ ++M+VT LYLD
Sbjct: 174 VGDPQLRVKVKDKSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAPGTNAATVRGALRAEREDLLTVVLPQSLSKQTSESQELLKKVDDLITMPQNDELSLDVASRICNSYLLSLTDQLVSFAFHESTTVIEASKEAKKLDMLVTTLYLD 346
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A1E7FA35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA35_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.660e-68 Identity = 111/164 (67.68%), Postives = 139/164 (84.76%), Query Frame = 1
Query: 1072 EKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
E++YS+ ILKELA IQ QGP+ +LGTRHCS+LHQQIIELLAYALVLSGNHVFTSGA GT+AA +RGALRAERE+LLTVVLPQS+ KQ+ S+EL+ KV +V+T P ND + LD ASR+CNS +LS T+QLI FAFH+S T++E +KEA++++M+VT LYLD
Sbjct: 1 ERDYSVTNILKELAAIQQQGPQKYSILGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAGGTHAAAVRGALRAEREDLLTVVLPQSMSKQTKESQELLDKVDDVITMPQNDDMSLDVASRICNSYILSLTDQLISFAFHESNTVVEASKEAKALDMLVTTLYLD 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig197.23.1 >prot_P-littoralis_Contig197.23.1 ID=prot_P-littoralis_Contig197.23.1|Name=mRNA_P-littoralis_Contig197.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp MSRHGRSSNFGGMQRTAASLLTLAVLAGLCSMASCFVASSSPATTTLVSRback to top mRNA from alignment at P-littoralis_Contig197:117957..126578+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig197.23.1 ID=mRNA_P-littoralis_Contig197.23.1|Name=mRNA_P-littoralis_Contig197.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8622bp|location=Sequence derived from alignment at P-littoralis_Contig197:117957..126578+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig197:117957..126578+ >mRNA_P-littoralis_Contig197.23.1 ID=mRNA_P-littoralis_Contig197.23.1|Name=mRNA_P-littoralis_Contig197.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig197:117957..126578+ (Pylaiella littoralis U1_48)back to top |