mRNA_P-littoralis_Contig197.23.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig197.23.1
Unique NamemRNA_P-littoralis_Contig197.23.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: D8LKY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY0_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.680e-130
Identity = 245/346 (70.81%), Postives = 259/346 (74.86%), Query Frame = 1
Query:  532 MSRHGRSSNFGGMQRTAASLLTLAVLAGLCSMASCFVASSSPATTTLVSRRHCRADRSCSSXXXXXXSRGVRHRTATKSNTSSMLQGRARG-LIRRQRLSCWSPG-GEGEIASASCSXXXXXXXXGSSAPNADGAVEGGDGIGLAIAAMGAPPSLLSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            M R GR+S   G +RTA  LL LAVLAG+ S+AS FVAS++            R  R  SS            R A    T SML   ARG L RRQR SC+  G GEG  ++   +             NA G  E G G G  IA  G  PSL SSQS APARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQ+QGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAER+ELLTVVLPQSLEKQS ASRELIQKVTNVVTNP+NDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARS+NMIVTELYLD
Sbjct:    1 MGRRGRASTLTGTKRTAC-LLVLAVLAGVLSIASSFVASNAAIAFG-------RQGRDSSSGT----------RAAPPQGTGSMLLEGARGKLTRRQRSSCFGTGDGEGTSSAVPAAGGKN---------NARG--ERGAGAGGGIAPAGRQPSL-SSQSAAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSAASRELIQKVTNVVTNPVNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 316          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A835ZAP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP1_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.460e-90
Identity = 151/198 (76.26%), Postives = 166/198 (83.84%), Query Frame = 1
Query:  970 MGAPPSLLSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            +G  P L S Q   P   +IPT VAVVG PQ  VEKEYSI+ ILKELAEIQ QGPKN C+LGTRHCSFLHQQIIELLAYALVLSGNHVFTSGA GTNAATIRGALRAER +LLTVVLPQSL KQS  S+EL+ +V NV+  P NDHLPLD ASRLCNSDLLSR +QLICFAFHDS TIIET +EAR+++MIVTEL+LD
Sbjct:    2 VGNTPELSSPQ---PTTVKIPTKVAVVGRPQIRVEKEYSIDTILKELAEIQRQGPKNYCILGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAGGTNAATIRGALRAERPDLLTVVLPQSLAKQSDESQELLTQVQNVIDAPQNDHLPLDVASRLCNSDLLSRADQLICFAFHDSHTIIETAREARALDMIVTELFLD 196          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7R9YDI6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDI6_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.080e-71
Identity = 127/180 (70.56%), Postives = 145/180 (80.56%), Query Frame = 1
Query: 1027 IPTDVAVVGAPQQVVE-KEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            IP  V +VG PQ V   K Y+I++ILKELA IQ QGPK+ C+LGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGALRA   +LLTVVLPQS+ KQ   S++L+ KV NVV    ND L LD ASRLCNSDLLSR EQLI FAFH+S+T+IE TKEA+S +M+VT LYLD
Sbjct:   62 IPDVVPIVGEPQAVFTGKNYTIDSILKELAAIQQQGPKSYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTNAAAIRGALRAGAPDLLTVVLPQSISKQPAESQKLLAKVKNVVEMSQNDGLGLDMASRLCNSDLLSRAEQLIAFAFHNSRTVIEATKEAQSRDMVVTVLYLD 241          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A6V2EYW5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EYW5_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.670e-71
Identity = 122/173 (70.52%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1048 VGAPQQ-VVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            VG PQ+ V+EKE S+ +ILKELA IQ QGP+  CVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ+  S+EL++ VT++VT P ND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE +KEA+ ++M+VT LYLD
Sbjct:  104 VGDPQKLVIEKEMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLNKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 276          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7R9WLF4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLF4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.850e-71
Identity = 124/183 (67.76%), Postives = 152/183 (83.06%), Query Frame = 1
Query: 1018 RTEIPTDVAVVGAPQ-QVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            R E+  + A VG PQ +V EKE S+  ILKELA IQ QGP+  C+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAERE+LLTVVLPQSLEKQ   S+EL++KV +++  P ND + LD ASR+CNS LLS+T+QLI FAFH+S T+IE TKEA++++M+VT L+LD
Sbjct:  141 RLELQRETANVGKPQLRVKEKEQSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAEREDLLTVVLPQSLEKQPKESQELLEKVDDLIEMPQNDGMSLDVASRICNSYLLSQTDQLISFAFHESTTVIEATKEAKTLDMLVTTLFLD 323          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7S2XNC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNC9_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.120e-70
Identity = 122/175 (69.71%), Postives = 149/175 (85.14%), Query Frame = 1
Query: 1045 VVGAPQQ--VVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            +VG PQ+  V EKE+S+ AILKELA IQ QGP+  CVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER +LLTVV+PQSL KQ+  S+EL++ VT+++T P ND + LD ASR+CNS LLS+++QLI FAFH+S T+IE TKEA+ ++M+VT LYLD
Sbjct:  130 LVGDPQRKMVKEKEWSVSAILKELAAIQQQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAERPDLLTVVVPQSLGKQAKESQELLKDVTDLITMPQNDDMSLDVASRICNSYLLSQSDQLISFAFHESTTVIEATKEAKELDMLVTTLYLD 304          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7S2I159_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I159_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.360e-69
Identity = 120/173 (69.36%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1048 VGAPQQVVEKE-YSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            VG PQ+++EK+  S+ +ILKELA IQ QGP+  CVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ+  S+EL++ VT++VT P ND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE +KEA+ ++M+VT LYLD
Sbjct:  147 VGDPQKLLEKKSMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLHKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 319          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A7S2RK03_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RK03_9STRA)

HSP 1 Score: 233 bits (594), Expect = 6.120e-69
Identity = 115/174 (66.09%), Postives = 145/174 (83.33%), Query Frame = 1
Query: 1045 VVGAPQQ-VVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            +VG PQ+ +++KE S+ AILKELA IQ QGP+  C+LGTRHCSFLHQQI+ELL+YALVLS NHV+TSGA GTNAA IRGALRAER +LLTV+LPQS+ KQ P S++L+  VT+++  P ND + LD ASR+CNS LLS T+QLI FAFH+S T+IE T+EA+ +NM+VT+LYLD
Sbjct:   96 LVGDPQKKILKKEKSVTAILKELAAIQQQGPQKYCILGTRHCSFLHQQIVELLSYALVLSENHVYTSGACGTNAAAIRGALRAERPDLLTVILPQSVGKQPPDSQDLLGGVTDLIAMPQNDEMNLDVASRICNSKLLSETDQLIAFAFHESTTVIEATREAKELNMLVTKLYLD 269          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A448ZCS9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCS9_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.180e-68
Identity = 119/173 (68.79%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 1048 VGAPQ-QVVEKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            VG PQ +V  K+ S+  ILKELA IQ QGP+  C+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAAT+RGALRAERE+LLTVVLPQSL KQ+  S+EL++KV +++T P ND L LD ASR+CNS LLS T+QL+ FAFH+S T+IE +KEA+ ++M+VT LYLD
Sbjct:  174 VGDPQLRVKVKDKSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAPGTNAATVRGALRAEREDLLTVVLPQSLSKQTSESQELLKKVDDLITMPQNDELSLDVASRICNSYLLSLTDQLVSFAFHESTTVIEASKEAKKLDMLVTTLYLD 346          
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Match: A0A1E7FA35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA35_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.660e-68
Identity = 111/164 (67.68%), Postives = 139/164 (84.76%), Query Frame = 1
Query: 1072 EKEYSIEAILKELAEIQDQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD 1563
            E++YS+  ILKELA IQ QGP+   +LGTRHCS+LHQQIIELLAYALVLSGNHVFTSGA GT+AA +RGALRAERE+LLTVVLPQS+ KQ+  S+EL+ KV +V+T P ND + LD ASR+CNS +LS T+QLI FAFH+S T++E +KEA++++M+VT LYLD
Sbjct:    1 ERDYSVTNILKELAAIQQQGPQKYSILGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAGGTHAAAVRGALRAEREDLLTVVLPQSMSKQTKESQELLDKVDDVITMPQNDDMSLDVASRICNSYILSLTDQLISFAFHESNTVVEASKEAKALDMLVTTLYLD 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKY0_ECTSI1.680e-13070.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAP1_9STRA1.460e-9076.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9YDI6_9STRA1.080e-7170.56Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V2EYW5_9STRA1.670e-7170.52Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9WLF4_9STRA1.850e-7167.76Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A7S2XNC9_9STRA1.120e-7069.71Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2I159_9STRA1.360e-6969.36Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2RK03_9STRA6.120e-6966.09Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A448ZCS9_9STRA1.180e-6868.79Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FA35_9STRA1.660e-6867.68Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:117957..126578 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKY0
Model size1755
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons5
Evalue2.4e-135
EggNOG OGs28KAM@1|root,2QSRD@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_005970.1
Cds size1035
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.23.1prot_P-littoralis_Contig197.23.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig197 118488..126389 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789944.275942-UTR-P-littoralis_Contig197:117956..1184871680789944.275942-UTR-P-littoralis_Contig197:117956..118487Pylaiella littoralis U1_48UTRP-littoralis_Contig197 117957..118487 +
1680789944.359083-UTR-P-littoralis_Contig197:126389..1265781680789944.359083-UTR-P-littoralis_Contig197:126389..126578Pylaiella littoralis U1_48UTRP-littoralis_Contig197 126390..126578 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789944.2878726-CDS-P-littoralis_Contig197:118487..1190211680789944.2878726-CDS-P-littoralis_Contig197:118487..119021Pylaiella littoralis U1_48CDSP-littoralis_Contig197 118488..119021 +
1680789944.3080919-CDS-P-littoralis_Contig197:123462..1235821680789944.3080919-CDS-P-littoralis_Contig197:123462..123582Pylaiella littoralis U1_48CDSP-littoralis_Contig197 123463..123582 +
1680789944.3229902-CDS-P-littoralis_Contig197:124226..1243151680789944.3229902-CDS-P-littoralis_Contig197:124226..124315Pylaiella littoralis U1_48CDSP-littoralis_Contig197 124227..124315 +
1680789944.3351152-CDS-P-littoralis_Contig197:124917..1250141680789944.3351152-CDS-P-littoralis_Contig197:124917..125014Pylaiella littoralis U1_48CDSP-littoralis_Contig197 124918..125014 +
1680789944.3488305-CDS-P-littoralis_Contig197:126194..1263891680789944.3488305-CDS-P-littoralis_Contig197:126194..126389Pylaiella littoralis U1_48CDSP-littoralis_Contig197 126195..126389 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig197.23.1

>prot_P-littoralis_Contig197.23.1 ID=prot_P-littoralis_Contig197.23.1|Name=mRNA_P-littoralis_Contig197.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
MSRHGRSSNFGGMQRTAASLLTLAVLAGLCSMASCFVASSSPATTTLVSR
RHCRADRSCSSSSSSSSSRGVRHRTATKSNTSSMLQGRARGLIRRQRLSC
WSPGGEGEIASASCSSSSSSSSGGSSAPNADGAVEGGDGIGLAIAAMGAP
PSLLSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQDQG
PKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGA
LRAEREELLTVVLPQSLEKQSPASRELIQKVTNVVTNPINDHLPLDAASR
LCNSDLLSRTEQLICFAFHDSKTIIETTKEARSINMIVTELYLD*
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mRNA from alignment at P-littoralis_Contig197:117957..126578+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig197.23.1 ID=mRNA_P-littoralis_Contig197.23.1|Name=mRNA_P-littoralis_Contig197.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8622bp|location=Sequence derived from alignment at P-littoralis_Contig197:117957..126578+ (Pylaiella littoralis U1_48)
AGTACTGCTGTAGTCTGCACTCGAGCTGCTTGCGTTGAAGAGGACGTGTC AAAGTTAAGTTCAGCCTTATCCACCACTTGCAGGTGAGTGACCTCGAGTA CCTCACCAGCAGCGAGCAAATGAGAGTATTTGCAGGTTAGAAGGCAGGCC TCACTTTCTCGTAGATGTCTCGCCATTTTACTTCCCTCTGATGCGCGCGT CATGCAGGCGGTCCTCATTTATCACCGCACTGTGGATGATCCAAGCGTCA AATAACGCCCAGCAAAGGTTGGCAGGAATACGTCAAATTGGCTCCCGTGC CTTATGCAAAATACAGAGGCCTTGTATCTATTCTCGAGTTGGCCGCTCTG GGGTGTAAATTACATGATCATGGATTTTCATGTTTCTGCTTCGATTGTGT GATTCTACCCAGCAGGGCAATCTTCAGTGCCAGCAAAGGGACAGCGGAAG ACGCAGCTTGCACCAGCGCTTCCCAAGTTCGTTGTGTCCCGCACCCCTAC GAGTCCTTCTCCTCGCCGTAGCCAATCAAATATGAGTAGGCACGGGAGAT CGTCGAATTTCGGAGGAATGCAGCGTACGGCAGCATCCCTCCTGACTTTG GCTGTGCTAGCGGGGTTGTGCTCGATGGCATCTTGTTTCGTCGCGTCGAG TTCTCCGGCAACTACTACTTTAGTCAGCCGTCGACACTGCCGCGCGGATC GTAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGGGGTAAGACAC CGAACCGCCACGAAAAGTAACACTAGCAGCATGCTACAGGGGAGGGCGCG TGGGCTCATAAGGCGACAGAGACTTTCTTGCTGGAGTCCGGGCGGGGAGG GGGAGATAGCCTCTGCCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCGGC GGCAGCAGCGCGCCGAATGCGGACGGGGCTGTGGAGGGGGGCGACGGGAT TGGGCTCGCGATTGCGGCAATGGGGGCGCCGCCGTCGTTGTTGTCGTCGC AGTCGACCGCACCAGCGAGGACGGAGATTCCGACAGACGTTGCTGTCGTA GGGGCACCCCAGCAGGTAGGGTGTAAGTGAACCTCTGTACTGTAATGCCG TGCCATTGTTTGTCTTTGGGCTGCTCCTGGGGCTGGGCTATAGCATGTAT GATACCAGTTTTTCAAATATGGTAGTTTTCGACCCGTCTTTTGCACATAG CTGCTGTCTCTATAGAAGGGCTTCGGACGCGGGGGCTTGGCGGCCCCCTC TTCTTTCGTTGAGGGTCGAAGAGGAATGGTAGTTATTCAACGGCACACCA AGTGGCAGCACGGGAAGAAATGGCAGTGAACGACGCGTAGACCCGGGCGT TATGCCCCTTTGCTTGGGGCTCCACGGACAGTGGCGGTAAAAAAATCCTC TGGGAAAAACTTTATTTTTTATCTCAAAATATCATTTTTCATTATTTAAT CAAACAGTAGACGTTATTTTGGCAAGGCCTCTTGTCCGTGCGTGCGCAAT CGCCTAGTTCCGATCAGGTGACGTTATAGTGGCTTCGTGTGCGTCGGCGC GTTCATATCTGCTGCTGGGGCTTAGATATGGAAGGTCGCAGCAGTCGCTC AAAACTCCGCTGGATCCCTGAAAAACTCCGCAATCCGGATCGACACCAAA CGTTTGACGCAGCTGTACTCGCCACCATTGGCACCAATCTTCTTGACTGC GGTTCGTCCTAGGTAGCTGTGGTGGCAAGTTTTTTGTTGAGGCCGGGGTA TGTGGCGGCGAGTACAGCAGTGGAACATATTTTTCTGGAAGCTGTCCAGT TTGCGGACTTTTGGAGCCACTGCTGCGACCTTCGATATCTAAGCCCCAGC AGCAGATATGAACGCGCTGACGCACACGTAGCTGCTACATGACCTGATCG AAACTAGGCCATCGTGCACGCACGGACAACAGCCCGTATTTTAGGTATGC ATATCAAAAGAAGCCCCTGCCGCCGCTGTGTGCGACGACCAACAGTGTTT CTCTTTCCCGGCGCCTTTCTACTGGTCTGAGGTTCTCAAGTGTGTGACTA CTGCCAGGGCCCCTTCCCTGTTTTTCAAAATCCGTACTCATTAATCTAAT CTGCTGTTCCATACAGCAGTAGCTGGTTGCTGTTTCACCTCCTCTGTGAA CGCCTACCCACGGTGAGACAGGAATGAAGCAAAATCTGAGAGATACAGGA GATTGATGCAGAAGATGTTGATCTGCACAAGTCTGCCCGTTTGAATTACC ACCCGCCCACATACTTCGAGCCTTCAAAAAATGGCACAGCGTCATTCACT TTTCAGACGCAAACTTACTAGCGTTGAACCCGGGTAACACATGAATCACA AAAAAAAGTGGCCATCTCTGCAGGTTCTGATTATTTTCTCAAAGTCGAGC GGTAGATGACAAGTATTGAGCTTTTGGATCTTTGATTTGCTAGTGCGTCG GTACTGCAGCTTGCACCTGCTGCTGCGACTCGGTCTACTTACACACACAC AAAAAATAGTTCGTTCTGATGTACTCCGTACTTCGTATCATCTGGCTCTA TTGTCCCCCTTTCCCATGTACAACAAATTGGTGTTTTGTTATTGTCCTAA AGCCGCAGTGCCGTGTATCAAGGTATGGACCCGACGCGACAAAGCTCACT AGATAGTTGAGCGACGTCTCGTGTGTGGCGGTACAGCGGCATACGAAGTA TTATTAAGAACGAAGTACTATTCCGTACATGCAAGAGAGCTTGCCTTTCA AGTTTCCATAGCTTGCTCCGCCTCTACACTACCAGTACTTGTTGCCAACG ATCGACGGTACGGCAAATTTCCTCAGTACTGACCGGGTAACTACCGCAAA TCAGCTTTCCTCAGTACTGACCGGTAAGTACCTCAAATAACGGGGACGGA TAAGTAGCATCCCCGGATCCCCCACCACTCACGGTAGGCAATCGACTTTT CGGTTATGTGTCTATGTGCTGCTATGTACTGCTGTGCGTGCTCGTGTGGC GGTGAGTGGGAGTCTGTTCTTGTGTTGTGTGGCTTGGCGGCGGGGGGTTC GTGTGAGGAGGGGGTCCCGTAGATGCCAACCCCCCCCAGGGCCCCAAGGC CCCCCCCCGGAAACCCGTGGAAGTACCGCTGGAAACCTCAGTACGTTCCG CTCGACTTAGTACCGGTAAGTACCGGTATTGCCGTACCATCGATCCTTCC TTATTACTGCTTGCTGTATCGCCCTACAGTTTCAAACAACAGCAGAGCAT TGCCTTGCCTAGTACATCGCGCAGCAGGCATGCTGTAAATCGCACAGCAG ACATCGCGCAACGGGGAGTTTGTAGTGCATAATATACAGCAGTAGCTCTG ATCGAGGGCACATGATAGCCGTAATGTTGAGTTAAGGAGGAGAGCGTTGT ATTGTAGAGCAAGTTGAGGTTGCAAGAAAGGCTCCTGCACACTGAAAAGT ATGATGGCGTTAAAAAAAATCTCAAGACACAACCACTGAACACCACACGG CTTGACGTGCGTGTATACTGGAGCTGCAGAGGGTGGGGGGAGCAGCAGAG TTGGGGCCTGTAGATCTAGAGAGAGCCGTCATCACGAACGCACACACATG AGCCTCTAAACTTTCGGACAGACCCTCCACGCGTAGAAAAATCTAAGAAG TTTCACAGACATACATTTTCCCAGCTTCGAGTTTCAAGATTCGGGCGCGC CTCGCGCGGCTGTATCTCAGATCGCGCTCCGAGCCTTGACCCCGGGGCAG TGGCAGGGGCGTAGAAACGGAAAAAAAATCGGCGTCCACACGGAAAGAAA ATAGAGTAAGATTTGTGCAAGTGGCGAGCCTGAGGGGCGATGAAAACCGT CTTAATTTCAAGGGGATCGATTTGTCCCGCTGCGCTCACAGCGGCCTAGA AGTAAAGAGTTATCGTGTGTGTTCAGGGTGGCCTGGCAAGGGCGTTAAGC AAATTCTCGGGAAAAAAAAACTACTTTTTGTCTATGATAGAAGACGTACT TCCATTCTTGAATATTGTCAAAACAGCTACTGCTGTAAGTTATTTGGCGA GACATCTCGTTAGGTCTGTCATCCAAGCAGTCCCGACTTGATTGTTGGCA TCAGTAGAGAACACCACTCAACAGTGAACGTGCGTGTCGGCACAATCAGA TCTGCTGCTAGTGCAGAGATATCGAAGGCCACAACAGTTGGTAAAAAAGC CCGCAAATTGCGGCCGAAACCAGGGGCTTTTCACTACTGTGCTTGCCGCC ACGCAGCTCGACCTCCTGAATGGCGGGCCATTCGAGGTAGCTAGTGATAT CAGCTACGACGTAGACCCGCTGTTCAGGAGGTTGGGGGCTGTGGGAGCGA GTACAGCGGCGGTAGATATCCGGACTGTCCAGTCTGCGGAGTTTTAGACC CACTGCTGTGGCCTTCGATATCTCCACGCCAGCAGCAGATCTGAAGGTGC ACGACAGACGCATGGCCGCTACATGATGTCCTCTATTGATTCCAACACTC GAGTCGAGTTTCCTTTAACGACAGGCGAAATGACAGGTCAAGCTACGTAA GCTGTTGTGACTCGATGAAAAGACTGTTGGAGTTTGTTTTCTTGATTTTT GATCAAGGTACAACAATGTGGAGGTAGACATGCGAACGTGACTGTGAAGA TATTGCATCTACCGGCGCTCTTCGCTAGAGCAGACGGATTTTCTCGTATC CAAACGCTTTCCTGCTGGTGTAGTCGATCTTCCTTGTGATTGCTGGGTGC TTTTTCGGATAACGTCGCAAGGGTACCAGATGAGGTTGTCATTGCACCCC TGATATTTACCTATATGGTTCAGTGCCTGAAAGTTACGCTGTACTGTACC TGGTACGCTAGAGTGCTGTTGATATCCCAAAGGGTTGAAGGCAATCTGTA GTTGAGGCAACGGTAATACATATTCCAGGGTTGTGGAGGACCCACAACAG CTGCCCAAACTCAGGCAAGCCTTGCGACCCTTCTGGAGCTCACAAAAGCT TTCCACACCAAAACGTTCTCCGCACTTAGAATGTCTTGCAATCCCGTTCA GCAGAGCTCTCGCCAGACCCCCACATCAAATGATTCCACGCACGTTGGTC CCCGGTCGCAGCAGCTCTTAGACCCGTGACGGAAGGGCTCCTTCGATTCT CGTTTCTCGACGAATGCGTGTTGCATTCACTCGTATCATCCATATTCCAC AACCTCTAGGTTGTCAGAGAGAGCTCCACATTACTCAGGCCTCGAACAAC GAACAACGGCGTGAGACTTGATTGACCCTCACGCACTTGTCTTCCACGGC TATCAGAGTGCAACGTTTTTTTATTTTTTCATTATCGCACGTGGCACGCC CGTCGTCAACCTTGTCAGGCGGCCGCGCCACGATTTTCCGGCGGTTCTTT CTCTCTAGTATTATCGAGACACGTTCTGTAGTACAGCAGAGGTGCAAGGT GCATTCAATGTCGCATTGACCTGCTGCTGCTGCTGCTGCTGCCGCTGTCT GTCCAGGTGGTGGAAAAGGAGTATTCTATAGAGGCGATCCTGAAGGAGCT CGCCGAGATTCAAGACCAGGGACCAAAGAACGTCTGCGTCCTGGGCACAC GGCACTGCAGCTTTTTGCACCAGCAGGTGACGACGACGGCGCACACCTGA CTTGGTCTACCGTACAGTTTGCATCATACTTCGTACTACATTATCTACTT CTTGGGCACTTCGAAGCAGTATTTTTGTATTTTTGCTGTTTGAGGGCCCT CCTGAGGCGTATTGCTGTTCATAGTTACGGAGTCCTTCGTATCTTTTTTC TACCGCTGTGTTCAGGGTTTCCGTCCGGTATCGGTTGGTGCCAACTGGCA AGGTGAGATTGTTGAGGCGGTCGTTGGATATTTCGTTGGTGTTTGTTCGT CACCACATGAGGGAGGCAAGAACGAGATCGATGAGTGTGGGAGACAGAGA GAGAGAAGGAGAGAGGCAGAGGCAGCTGGTGGCAGCTGCACGTTGATCCA TGCTGGAGTTACACACAAGATATAACACCACCAGGGCGCTCCCAGAAAGT CTTGGGATACGCCGGACTGAGTGGCTCTCAGATGTGGCACTATCCCGTCG GAAATTCCCGACGGGTCCCTTGGCGTCACCACCTACGGGCATTGCATGGC AGCATTCATGTATGAATCCACTCTTGTTTACTCGTCTCGCCGTGGTAATG GCGTCGCCGCGTGGGGTTCTGAATGGAGACGTCTCTTTTGTTCTTTTTTG TTGCGAACGCCCTCAAAAAGATAATCGAGCTGCTGGCGTACGCCTTGGTG CTGAGCGGGAACCACGTTTTCACTTCGGGGGCAATGGGGACTAACGCCGC CACAATAAGGTACAAGTATGTACAAGCACGAGTATGGAATTTGTGATGCT GTACTCGGGGTGTCGATTGCCGCCGCAGAATTGTGCTGACACTTTGTGAG TCTCGGTAGGAACTGTGCAAAATGTGATTTATCGTATCATACATGATCGG AACTGTTGGAAGTGTTCGATGTGCCAAATGTCGCCACGAACAGGTCCGGA CTTTTTTTGTTCTCAGGAGGTAAAGTGCAAAATATGATCTGTGCGTATAC TTCGAAGTATGATCGGAATTGTTGAATTGCTCAATGTGCCAAATGTCGGC ACGAAGAGGTCCGGACCTTGTGGTTCTCAGTAGGCGAAGTGTGATACTCG ACACCGGCGAAAGATCGCCATAAAAAAAGTTCAGGCTTCGTGATGCTCGG AAGGCGTTCGGGGATTGAAGTTCTGATTGCTGAATGGTTGAAAGGTCCAA GTCCCTGGCTAGGTGGAGGGTTTGAGATGTCCCTCCTACCGTTGATGAGC GAGTGGTGACAACGTTAACGCAATTTGTGTATTGCCGTTTACACTAGGCT AAGCTGTACGTCTTTTTCTGTCATTCTCGGGTTGCCTTGTGCCCGTGTGC GATGGTGGCAGGGGTGCTCTGCGAGCAGAACGGGAGGAGCTTTTGACGGT GGTGCTGCCACAGAGCTTGGAAAAGCAGAGCCCAGCGTCCAGAGAGCTCA TACAGAAGGTGTACGCCCCTTCGTCCATGTATTTTGTTGCTGTTGTTGTT GTTGTTGTTGTTGTTGTTGCTGTTGTTGCTGTTGGGTCACCATGCTGTTG CGTTAGCAAAGTACTCTGCCAACCCTCGCCGCTTGCATTTCCCTTAACCG TGATCTTTTGCTGCTCCTCCCCTGATCTCCACGCTTCCCGTAGACCATGT ACTCTGTGCACATGTTCATTTAGCATTGGTCGCATATCCTCAGTCGTATC GCCCGCCATCTGTCTCTCGGCTGTCATATCGATCTAACCACGCATGTACA AAAGTGGCGGCGAACGTCCCGTTGAGCGACCAGCCGTCCCGTCAACGCCT CTTTCCATTTTTTCGATGTTAAAACGCCCTCTCTCGTTGTCCTGCTGTTT CGCGCCACCCCTCCTTGAACGAACAGACTACGACCCCCCCCCGCCCCTCG TCGATTAATCCAAGAACGCATTGTTCGCTAGATGGACCTATCCATCTAGA CCACTCTGTCAGCCACCGTTTCGCCCAACCAACCAGTAGGTTCCCTTCTA TATTCGTCGCCTTTCGTTGCCACGTCCTTGCTTGACGCACAGGACAGGCG GGCCGCTGATCCTGCTCGTTTTTTGAGGGCAGCTCCTCGTTCTTTGATTG TCTATGTTGTTTTCTTTTCTCTGCACTCACACCAAAACAACATTTTCCGT CTCGAAGGGAAACAGAACGCCCGTCGATTGAAGTGTGGAGTCGTTCGGGT CCGTCGTCACGCTGCTCCCCTGTTTCATGGCTTCTTTCGTTGTTTTTCTT TTGATCAGGCATTTGTTTTAGTCTTCCTCCTCTTGCGTGACCCCGGCTGA TGCTGCCCACGAATGATGCACCGAAAGGTGGAAGGCTTGCGTGGAGAGTA GATGAAATAACAACACGCAACACAAAGTAACATACTCCTAAACACCGAAA GGCGTGGAGAGTAGATGTAATGACAACACGCAACACAAAAAACAACAAAA CACGCCAAAATACCGAAACAACTTTAGTCGTGCCCAGAAACAACACACAA CACGATGCGACAACACAACAACTTCGGCCTTTCAGGCTTGACCAAAAACA ACACACCACAACAGTATTGTTTGGTTTATCGCACCTCATCGCGTCTCCCC GTGTGTGACTTTCACTTGACTGCCGTCACTGCAACCAGGTAACGAACGTG GTGACGAACCCAATCAACGACCATCTGCCCCTAGACGCCGCGTCAAGGCT GTGCAACTCCGACCTTCTTTCGCGGACGGAGCAGCTCATCTGCTTCGCCT TCCACGACTCTAAAACCATCATCGAGACCACCAAGGAGGCCAGGTCCATC AACATGATCGTCACTGAGCTGTACCTAGACTAGACTGGGGATGACGCAAA TCTATCGTTACTCTCACTCTTATCTTCACGTGAGAACTCGCGTGATCTGA TGCGCGCGGTCTGACGCGATCGATCCCAGAGGATCTGCTTTTTTTTTCTC ACGTAATCTTGTGTGCCCTGATTCAATTTGGTGTGATGTGACATGATCTG GGAGCTGGTGTCGGGGGTTCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig197:117957..126578+

>mRNA_P-littoralis_Contig197.23.1 ID=mRNA_P-littoralis_Contig197.23.1|Name=mRNA_P-littoralis_Contig197.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig197:117957..126578+ (Pylaiella littoralis U1_48)
ATGAGTAGGCACGGGAGATCGTCGAATTTCGGAGGAATGCAGCGTACGGC
AGCATCCCTCCTGACTTTGGCTGTGCTAGCGGGGTTGTGCTCGATGGCAT
CTTGTTTCGTCGCGTCGAGTTCTCCGGCAACTACTACTTTAGTCAGCCGT
CGACACTGCCGCGCGGATCGTAGCTGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGGGGGGTAAGACACCGAACCGCCACGAAAAGTAACACTAGCAGCA
TGCTACAGGGGAGGGCGCGTGGGCTCATAAGGCGACAGAGACTTTCTTGC
TGGAGTCCGGGCGGGGAGGGGGAGATAGCCTCTGCCAGCTGCAGCAGCAG
CAGCAGCAGCAGCAGCGGCGGCAGCAGCGCGCCGAATGCGGACGGGGCTG
TGGAGGGGGGCGACGGGATTGGGCTCGCGATTGCGGCAATGGGGGCGCCG
CCGTCGTTGTTGTCGTCGCAGTCGACCGCACCAGCGAGGACGGAGATTCC
GACAGACGTTGCTGTCGTAGGGGCACCCCAGCAGGTGGTGGAAAAGGAGT
ATTCTATAGAGGCGATCCTGAAGGAGCTCGCCGAGATTCAAGACCAGGGA
CCAAAGAACGTCTGCGTCCTGGGCACACGGCACTGCAGCTTTTTGCACCA
GCAGATAATCGAGCTGCTGGCGTACGCCTTGGTGCTGAGCGGGAACCACG
TTTTCACTTCGGGGGCAATGGGGACTAACGCCGCCACAATAAGGGGTGCT
CTGCGAGCAGAACGGGAGGAGCTTTTGACGGTGGTGCTGCCACAGAGCTT
GGAAAAGCAGAGCCCAGCGTCCAGAGAGCTCATACAGAAGGTAACGAACG
TGGTGACGAACCCAATCAACGACCATCTGCCCCTAGACGCCGCGTCAAGG
CTGTGCAACTCCGACCTTCTTTCGCGGACGGAGCAGCTCATCTGCTTCGC
CTTCCACGACTCTAAAACCATCATCGAGACCACCAAGGAGGCCAGGTCCA
TCAACATGATCGTCACTGAGCTGTACCTAGACTAG
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