mRNA_P-littoralis_Contig192.50.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.130e-40 Identity = 113/235 (48.09%), Postives = 146/235 (62.13%), Query Frame = 2
Query: 821 RQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASIMSFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALISSLRRDTFVK---------EELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIA-PAAKVSVWTEATSSSLTVMMPTMRRSIKSRGVLSAALHR 1495
RQVGI+GCGG S G AL+ AA +K+++IMVIL +AGVVD G ALV AA G E P+KFLL++ R R+TM E +YVN+RD G TPLL I + PR+ R+L++AGADTTS V +G + TPL L + RD VK E+L K+EA RRLLL+V+AV AVSWLWP +I I AA+ + T A S+++T+ M RR + R V AAL R
Sbjct: 207 RQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQA---------RARKTMDEAAYVNTRDRG-GVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDK-VKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLR 430
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 155 bits (392), Expect = 7.420e-37 Identity = 104/230 (45.22%), Postives = 138/230 (60.00%), Query Frame = 2
Query: 821 RQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASIMSFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALISSLRRDTFVK----EELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIAPA-AKVSVWTEATSSSLT--VMMPTMRRSIKSRGVLSAAL 1489
RQVGI+GCGG S G+ ALR AA++ +DIM IL DAGVVD G ALV AA G E P+KFLL++ R R++ +Y+N+ + + G T LL I PR+ ++L++AGADTTS V GE F+ TPL L L K EE K+E RRLLL+ +AV AVSWLWP + P I A AK + T ATS++ T +M+ RR+ +G+L+A L
Sbjct: 207 RQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQA---------RGRKSTDRAAYMNTLNGV-GLTSLLDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALL 426
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.890e-34 Identity = 105/248 (42.34%), Postives = 141/248 (56.85%), Query Frame = 2
Query: 821 RQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVS-YVNSRDSLLGQTPLLASI-----MSFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALIS-SLR-----RDTFVKEELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIAPAAKVSVWTEATSSSLTV-----MMPTMRRSIKSRGVLSAALHR*AVAYD 1513
++ GI GCGG + G TAL++AA+ HMD+M+ L AGVVD G ALV A G VKFLLQ+ + T E S YV+ G+TPL+ +I S SP++ R+L+DAGADTTS V+FT+ G TPL+L + +LR R E LR++E RRLLL+V+AV A SWLW +P + A + TE SSS T ++P +RR + RG +SA+L R AV D
Sbjct: 204 QRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQ-----------QNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKLD 440
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 148 bits (374), Expect = 5.330e-34 Identity = 108/238 (45.38%), Postives = 135/238 (56.72%), Query Frame = 2
Query: 821 RQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLA---SIMSFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALISSLRRDTFV-------KEELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIAPAAKVSVWTEATSSSLTVMMPTMRRSIKSRGVLSAALHR*AV 1504
+++GIEGC SAG AL AA +H+DIM IL +AGVVD G AL AA G E VKFLL+ R HK E E +Y+N+RD + G TPL+ S +PRI R+L+DAGADTTS VQ G FN+TPLA R V KE L+++EA RLLL+VDAV AVSWLWP P I A + E +L +M+P ++R K R L A L R +V
Sbjct: 299 QELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHR-------HK-EGGCGVEGAYLNARD-VNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDP--EPPLPALKLMLPILKRRTKRRCGLVATLLRYSV 525
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 134 bits (338), Expect = 8.170e-32 Identity = 96/212 (45.28%), Postives = 124/212 (58.49%), Query Frame = 2
Query: 893 KHMDIMVILMDAGVVDA-GSALVYAAQCGDEGPVKFLL-QRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASI---MSFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALISSLRRDTFV------KEELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIAPAAKVSVWTEATSSSLTVMMPTMRRSIKSRGVLSAALHR 1495
+HMDIM IL AGV DA G L+ A G E V+FLL QRRK E VH +Y NS D G TPL SI S +PRI R+L+DAGADTTS V+ T G +N+TPLA+ +SL R+ V +E+L +++A RRLLL+VDAV AVSWLWP + P+I A + S E L++ +P ++R K+ V A L R
Sbjct: 3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVH----------AYANSSDGS-GMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLR 203
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 139 bits (350), Expect = 1.320e-31 Identity = 183/430 (42.56%), Postives = 233/430 (54.19%), Query Frame = 2
Query: 269 LHEAAYHGSTEDILSILSRGSVAIDHVGPGGYTPLMFAARKCQSSAVRVLLNKGANLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPGRCIPSGGXXXXXXXXXXXXXXXXXXXXXXXXXXSLIRDG--DVVXXXXXXXXXXXXXXXXXXRQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASI-------MSFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALISSLRRD-----TFV-KEELRKIEATRRLLLQVDAVRAVSWLWP------GNIPAIAPAAKVSVWTEATSSSLTVMMPTMRRSIKSRGVLSAALHR 1495
LH+AA+ GSTE +L+ GS I+ +TPL+FAA SS + +LL+KGAN+SI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN P G + R ++ ++VGIEGCGG S G+ AL MA + + M +L AGVVD G AL +A G E VK+LLQ H + G +YVN RD G TPLL+SI S PR+ R+L++AGADTT+ ++ T +G F+ TPL L + +D T++ K+ L ++E RRLLLQV+AV A SWLWP G P A A+V+ T A + L ++P +RR + GV+ AL R
Sbjct: 4 LHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQN--------HAKH---YGPGAYVNVRDRN-GTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNA--AEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCR 419
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 138 bits (348), Expect = 1.740e-31 Identity = 100/237 (42.19%), Postives = 128/237 (54.01%), Query Frame = 2
Query: 821 RQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVD-AGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASIMS-----FSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALIS--SLRRDT----FVKEELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIAPAAKVSVWTEATSSSLTVMMPTMRRSIKSRGVLSAALHR 1495
R+ GI CGGPS G ALR+AAVY +DIM +LMDAGVVD G AL+ A G E V FLL R++E + SYVN G T LL S +PRI R L+DAGADTTSAVQ N TPL ++ +LR E+L ++EATRR+LL+V AV AVSW+WP + P +A A + + + LT ++P +RR R +L L R
Sbjct: 177 REFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLL------------RQQEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFR 401
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 137 bits (346), Expect = 5.370e-31 Identity = 101/242 (41.74%), Postives = 136/242 (56.20%), Query Frame = 2
Query: 821 RQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAG-VVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASI-----MSFSPRIGRILIDAGADTTSAVQFT-VGIGEGFFNETPLALISSLRRDTFV------KEELRKIEATRRLLLQVDAVRAVSWLWP-GNIPAIAPAA---KVSVWTEATSSSLTVMMPTMRRSIKSRGVLSAALHR 1495
RQVGI GCGGPS G ALR AA +H++ M +L+DAG VVD G AL+ AA+ G VKFLL+RR+ +YVN G+TP++ ++ SP+I R+L+DAGA+TT AV T + +ETPLA + L R+ V KE+L++++ TR LL + +AV AVSWLW G P IA AA K + A ++ L M P +RR +RGVL L R
Sbjct: 203 RQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADAD-------------AYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFR 431
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.490e-29 Identity = 90/195 (46.15%), Postives = 114/195 (58.46%), Query Frame = 2
Query: 824 QVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASIMSFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALISSLRRDTF------VKEELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIAPAAK 1390
++GI CGGP+ G ALR+AA +HM IM L DAGVVD G+AL A G E PVKFLLQ QK + T G +YVN+R TPL +I SPR+ R+L+DAGAD TS GI + +PL+ S R F +E+L ++A RRLLL+V+A+ A SWLW NIP IAPAA+
Sbjct: 260 RLGIGLCGGPTRGNDALRLAAWVQHMSIMTALTDAGVVDTGTALFNVAAKGLEAPVKFLLQ------QKWN-----TPGG-AYVNTRSRNAKFTPLFIAIEGASPRVVRMLLDAGADVTSTCSLPGGI-----SRSPLSQCESNIRSKFCQALPATEEQLNGLQAIRRLLLRVEAIYASSWLWCSNIPCIAPAAR 437
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 131 bits (329), Expect = 8.920e-29 Identity = 202/422 (47.87%), Postives = 248/422 (58.77%), Query Frame = 2
Query: 269 LHEAAYHGSTEDILSILSRGSVAIDHVGPGGYTPLMFAARKCQSSAVRVLLNKGANLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPGRCIPSGGXXXXXXXXXXXXXXXXXXXXXXXXXXS-LIRDGDVVXXXXXXXXXXXXXXXXXXRQVGIEGCGGPSAGQTALRMAAVYKHMDIMVILMDAGVVDAGSALVYAAQCGDEGPVKFLLQRRKMQEQKVHKRERETMGEVSYVNSRDSLLGQTPLLASIM---SFSPRIGRILIDAGADTTSAVQFTVGIGEGFFNETPLALIS-SLRRDTF-----VKEELRKIEATRRLLLQVDAVRAVSWLWPGNIPAIAPA---AKVSVWTEATSSSLTVMMPTMRRSIKSRGVLSAALHR 1495
LH+AAYHGS + + ++LS GSV I+ P G+TPLM A K S + LL KGAN+S+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX S ++R+ +Q+G+ GCGG SAG +LR+AA +++DIM IL GVVD G ALV AA+ E VKFLLQ + G YVN+ G+TPL+ +I S SPRI R LID GADT S V T +TPL + SLR++ +E+LR ++A RLL Q++AV AVSWLW + I A A + +L M +R ++ RGV+ A++R
Sbjct: 36 LHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQHGHSEVVRE--------------------LIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQH-------------QAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig192.50.1 >prot_P-littoralis_Contig192.50.1 ID=prot_P-littoralis_Contig192.50.1|Name=mRNA_P-littoralis_Contig192.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=442bp MFTAGCNLPPVPSEEEEEEEDYPWSTIAAPSVLHEAAYHGSTEDILSILSback to top mRNA from alignment at P-littoralis_Contig192:246327..249234- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig192.50.1 ID=mRNA_P-littoralis_Contig192.50.1|Name=mRNA_P-littoralis_Contig192.50.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2908bp|location=Sequence derived from alignment at P-littoralis_Contig192:246327..249234- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig192:246327..249234- >mRNA_P-littoralis_Contig192.50.1 ID=mRNA_P-littoralis_Contig192.50.1|Name=mRNA_P-littoralis_Contig192.50.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1326bp|location=Sequence derived from alignment at P-littoralis_Contig192:246327..249234- (Pylaiella littoralis U1_48)back to top |