mRNA_P-littoralis_Contig191.92.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: A0A6H5JMD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD9_9PHAE) HSP 1 Score: 281 bits (719), Expect = 9.100e-88 Identity = 148/210 (70.48%), Postives = 170/210 (80.95%), Query Frame = 3
Query: 75 RMRVLPPMMFLSLAISGCLAFRSHLSGSFSTSTQVTPRLAGAVRHKRPLRMMPIEAAVVDGASLGEAVNHATYVLAAVAADASRGGAVVEQIPYVPAGDVADFDKILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDELNEAARAAKEGRTRP 704
RM VL L A S CLAF + + +++T + R G KR LRMM EAA DGAS+ EA++HAT++LA VAAD+SRGGAVVEQIPYVP GDVADFDKI++G+AAC+ AYAWAAYEFG RIVTQRACEVC+GSGLV+TSRSGK+L QP KCYACGGFLPWESW KFW+TNMDVGNGGVLQRPA +YDELNEAARAAKEG+T P
Sbjct: 2 RMGVLSSPFLLLFASSTCLAFHPDVPTTITSTTASSAR-RGTTSQKRQLRMMHFEAA--DGASVIEAIDHATWILA-VAADSSRGGAVVEQIPYVP-GDVADFDKIVIGSAACLAAYAWAAYEFGKRIVTQRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAARAAKEGQTTP 206
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: D7G800_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G800_ECTSI) HSP 1 Score: 259 bits (663), Expect = 3.500e-80 Identity = 130/160 (81.25%), Postives = 146/160 (91.25%), Query Frame = 3
Query: 225 MMPIEAAVVDGASLGEAVNHATYVLAAVAADASRGGAVVEQIPYVPAGDVADFDKILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDELNEAARAAKEGRTRP 704
MM EAA DGAS+ EA++HAT++LA VAAD+SRGGAVVEQIPYVP GDVADFDKI++G+AAC+ AYAWAAYEFG RIVTQRACEVC+GSGLV+TSRSGK+L QP KCYACGGFLPWESW KFW+TNMDVGNGGVLQRPA +YDELNEAARAAK+GRT P
Sbjct: 1 MMHFEAA--DGASVIEAMDHATWILA-VAADSSRGGAVVEQIPYVP-GDVADFDKIVIGSAACLAAYAWAAYEFGKRIVTQRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAARAAKDGRTTP 156
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: A0A835Z783_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z783_9STRA) HSP 1 Score: 164 bits (415), Expect = 5.830e-44 Identity = 81/143 (56.64%), Postives = 99/143 (69.23%), Query Frame = 3
Query: 258 ASLGEAVNHATYVLAAVAADASRGGAVVEQIPYVPAGDVADFDKILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDELNEAARAAK 686
A LG+A++ T + ++ G Q YVP V +F +I+ G+AA V Y WA YEFGSRIVTQRAC VC GSGLV SR+G+KL QP KCYACGGFLPWESW +FW N VGNGG+L+RPA++YDELN AR A+
Sbjct: 3 AELGDALSAVTLLAESLKEVPGLGIPAQPQNVYVPPDQVDNFPQIVAGSAAGVLVYLWALYEFGSRIVTQRACAVCNGSGLVTVSRTGRKLMQPRKCYACGGFLPWESWSRFWVANKYVGNGGILRRPAADYDELNAKAREAQ 145
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: I2CSA8_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSA8_NANGC) HSP 1 Score: 132 bits (333), Expect = 1.320e-32 Identity = 67/138 (48.55%), Postives = 89/138 (64.49%), Query Frame = 3
Query: 300 AAVAADASRGGAVVEQIPYVPAGDVADFDKILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDELNEAARAAKEGRTRPPAD 713
AA +A S GGA+ E +++ +G A V + WA +EF RI Q+ C VC+GSGLV + SGK LS P KCYACGGFLPW W++FW +N+D+GNGGVLQRPA++Y+ L+EAA+ + GR AD
Sbjct: 24 AASSAAGSTGGALNEVTS----------EQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAGREGGRAD 151
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: W7TBR1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBR1_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.500e-31 Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 3
Query: 300 AAVAADASRGGAVVEQIPYVPAGDVADFDKILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDELNEAARAAKEG 692
AA +A S GGA+ E +++ +G A V + WA +EF RI Q+ C VC+GSGLV + SGK LS P KCYACGGFLPW W++FW +N+D+GNGGVLQRPA++Y+ L+EAA+ + G
Sbjct: 122 AASSAAGSTGGALNEVTS----------EQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAG 242
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: A0A7S2V7K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7K2_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.930e-26 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3
Query: 387 KILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDELNEAARA 680
++ + ACV + WAAYEF SR Q C VC+G+GLV + +G LS P KCYACGGF+P+ SW++F+ N +GNGG+L+RPA NY+EL+ AA+A
Sbjct: 91 ELWIANGACVLVFLWAAYEFWSRFDVQGRCGVCQGTGLVMETSTGIPLSNPRKCYACGGFVPFVSWRQFFFANTQIGNGGILRRPAKNYEELSAAAKA 188
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: A0A4D9CUP8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUP8_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.620e-21 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 3
Query: 384 DKILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGG 626
+++ +G A V + WA +EF RI Q+ C VC+GSGLV + SGK LS P KCYACGGFLPW W++FW +N+D+GNGG
Sbjct: 140 EQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGG 220
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: A4S5T7_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S5T7_OSTLU) HSP 1 Score: 94.7 bits (234), Expect = 1.010e-18 Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 3
Query: 357 VPAGDVADFD--KILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRS-GKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRP---ASNYDELNEAARAAKEGRTRPPADGQ 719
+P DVA + ++ G A V +A AAYEFG R++ QR C +C GSGLV RS G +L VKC ACGGFLPW+SW++F + + GNGGV++ P S + + +A A++E R DG+
Sbjct: 52 LPDADVAPVEAWQLWFGFIAGVSPFAIAAYEFGKRVLIQRRCALCAGSGLVEVERSRGARL---VKCTACGGFLPWQSWERF--LSSEAGNGGVVRAPKGQTSAFYSVEKATAASREMAARRARDGE 173
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: A0A7R9TP18_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TP18_9VIRI) HSP 1 Score: 86.3 bits (212), Expect = 4.800e-16 Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 3
Query: 387 KILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDEL 662
++++G V +AWA+ EFG RI+ QR CE C GSGLV G L + V+C ACGGFLPWESW+KF+ G GG L P L
Sbjct: 40 QLVVGFVVGVFPFAWASVEFGKRILIQRRCEGCGGSGLVEIGSKG--LRRKVRCRACGGFLPWESWEKFFLGTGTPGTGGPLLVPRGQTGRL 129
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Match: A0A7R9TTR7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TTR7_MICPS) HSP 1 Score: 86.3 bits (212), Expect = 2.840e-15 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 3
Query: 387 KILLGTAACVGAYAWAAYEFGSRIVTQRACEVCEGSGLVNTSRSGKKLSQPVKCYACGGFLPWESWKKFWQTNMDVGNGGVLQRPASNYDELNEAARAAKEGR 695
+I G A + + AAYEFG RI+ QR CE+C+GSGL+ R +K C +CGGFLPWESW+ F+ + + GNGG L++P + A ++ R
Sbjct: 130 QIYYGAVAGLSPFVIAAYEFGKRILIQRRCELCQGSGLIKRGRYSRK------CTSCGGFLPWESWELFFTS--EAGNGGALRQPKGQTSAFYDVDAATEDSR 224 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.92.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig191.92.2 >prot_P-littoralis_Contig191.92.2 ID=prot_P-littoralis_Contig191.92.2|Name=mRNA_P-littoralis_Contig191.92.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp MSRMRVLPPMMFLSLAISGCLAFRSHLSGSFSTSTQVTPRLAGAVRHKRPback to top mRNA from alignment at P-littoralis_Contig191:329188..332686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig191.92.2 ID=mRNA_P-littoralis_Contig191.92.2|Name=mRNA_P-littoralis_Contig191.92.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3499bp|location=Sequence derived from alignment at P-littoralis_Contig191:329188..332686- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig191:329188..332686- >mRNA_P-littoralis_Contig191.92.2 ID=mRNA_P-littoralis_Contig191.92.2|Name=mRNA_P-littoralis_Contig191.92.2|organism=Pylaiella littoralis U1_48|type=CDS|length=654bp|location=Sequence derived from alignment at P-littoralis_Contig191:329188..332686- (Pylaiella littoralis U1_48)back to top |