mRNA_P-littoralis_Contig19.90.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: D7FLT6_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT6_ECTSI) HSP 1 Score: 145 bits (365), Expect = 5.200e-34 Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 2
Query: 1331 RRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQTPLLNNPDVVERQLNELSASNGKPFATAGAPELP 1606
RRGP GQS FKGVCITPAGTWRAVIYV+R+QKYLGVFDSEFDAARAYDAAA +H PG LNNPD +ER+L ELSA++GKPFATAGA P
Sbjct: 304 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVHCPGSQ--LNNPDQIERELYELSAADGKPFATAGAEPPP 393
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: A0A6H5KY97_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY97_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.800e-33 Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 2
Query: 1331 RRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQTPLLNNPDVVERQLNELSASNGKPFATAGAPELPE 1609
RRGP GQS FKGVCITPAGTWRAVIYV+R+QKYLGVFDSEFDAARAYDAAA ++ PG LNNPD +ER+L+ELSA++GKPFATAGA PE
Sbjct: 421 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVYCPGSQ--LNNPDQIERELHELSAADGKPFATAGAEPPPE 511
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE) HSP 1 Score: 130 bits (328), Expect = 2.410e-28 Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 2
Query: 1331 RRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQTPLLNNPDVVERQLNELSASNGKPFATAGA 1594
RRGP GQS FKGVCIT AG WRAVIY+ R+QKYLGVFDSEFDAARAYDAAA+ HF + LN PD +ERQLN++S+ +G+PFATAGA
Sbjct: 399 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHF-AEGAKLNFPDGIERQLNDISSVSGRPFATAGA 485
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI) HSP 1 Score: 115 bits (287), Expect = 1.400e-23 Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 2
Query: 1331 RRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQTPLLNNPDVVERQLNELSASN 1567
RRGP GQS FKGVCIT AG WRAVIY+ R+QKYLGVFDSEFDAARAYDAAA+ HF + LN PD +ERQLN++S+++
Sbjct: 341 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHF-AEGAKLNFPDGIERQLNDISSAD 418
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.770e-15 Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 2
Query: 1331 RRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHF 1495
RRGP GQS FKGVCIT AG WRAVIY+ R+QKYLGV+DSE AARAY+ +A+ HF
Sbjct: 231 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHF 285
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK) HSP 1 Score: 85.5 bits (210), Expect = 9.670e-15 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 2
Query: 1331 RRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQTPLLNNPD 1528
RRGP GQS FKGVC+T AG WR+VIYV R+Q YLGVF++E +AA+AYD +A+ +F G +LN PD
Sbjct: 143 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYF-GDGAVLNFPD 207
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK) HSP 1 Score: 85.5 bits (210), Expect = 1.210e-14 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 2
Query: 1331 RRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQTPLLNNPD 1528
RRGP GQS FKGVC+T AG WR+VIYV R+Q YLGVF++E +AA+AYD +A+ +F G +LN PD
Sbjct: 156 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYF-GDGAVLNFPD 220
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.320e-14 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 2
Query: 1301 KGGKRRKVIRRRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQ 1504
KGG R RRRG G+S ++GVC+T G WRAVIY ER+Q YLGVF+SE DAA+A+D AA HF Q
Sbjct: 12 KGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQ 79
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 3.310e-11 Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 2
Query: 1328 RRRGPAGQSHFKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQT 1507
RRRG G+S ++GVC+T G WRAVIY ER+Q YLGV++SE +AA+A+D AA HFP ++
Sbjct: 133 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKS 192
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.550e-11 Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 2
Query: 1358 FKGVCITPAGTWRAVIYVERRQKYLGVFDSEFDAARAYDAAAILHFPGQ 1504
++GVC+T G WRAVIY ER+Q YLGVF+SE DAA+A+D AA HF Q
Sbjct: 1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQ 49 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.90.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig19.90.1 >prot_P-littoralis_Contig19.90.1 ID=prot_P-littoralis_Contig19.90.1|Name=mRNA_P-littoralis_Contig19.90.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=513bp MPTTAESDRMQDGPCSNLFRDEAKPRLLTPRPSPASAEAAPAGARSDALAback to top mRNA from alignment at P-littoralis_Contig19:432792..434938- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig19.90.1 ID=mRNA_P-littoralis_Contig19.90.1|Name=mRNA_P-littoralis_Contig19.90.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2147bp|location=Sequence derived from alignment at P-littoralis_Contig19:432792..434938- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig19:432792..434938- >mRNA_P-littoralis_Contig19.90.1 ID=mRNA_P-littoralis_Contig19.90.1|Name=mRNA_P-littoralis_Contig19.90.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1539bp|location=Sequence derived from alignment at P-littoralis_Contig19:432792..434938- (Pylaiella littoralis U1_48)back to top |