mRNA_P-littoralis_Contig186.146.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig186.146.1
Unique NamemRNA_P-littoralis_Contig186.146.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5JRU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU6_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 6.430e-83
Identity = 162/328 (49.39%), Postives = 191/328 (58.23%), Query Frame = 2
Query:   20 NGTSDDCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCD-------QERTGCGQATEAGG-----------------------C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEKHTQAKK 901
            N  S DC+CHDCK   FVD +RV    PFN  DL A DG+G+F LLPDHEV ALYFHDET  KEND+G CQWM   K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ       K V   P  EV+ Q    G G   +        ER+G     + G                        C +   +N  R+    +  G N DG        ++RMC QI    AIHELTS+ HR +VMVFDNSTGHAAYE GAL+A+HI  +PGG QV+LD F D  GNLVH TFR GD + F T +YA KTP Q+E E+   AKK
Sbjct:   67 NWISADCDCHDCKRTPFVDSSRV----PFNRRDLSASDGQGDFCLLPDHEVLALYFHDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQED-----KSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDG-----YWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILD-FLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKK 379          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.550e-81
Identity = 163/328 (49.70%), Postives = 192/328 (58.54%), Query Frame = 2
Query:   20 NGTSDDCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCD-------QERTGCGQATEAGG-----------------------C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEKHTQAKK 901
            N  S DC+CHDCK   FVD +RV    PFN  DL A DG+G+F LLPDHEV ALYFHDET  KEND+G CQWM   K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ       K V   P  EV+ Q    G G   +        ER+G     + G                        C +   +N  R+    +  G N DG        ++RMC QI    AIHELTS+ HR +VMVFDNSTGHAAYE GAL+A+HI  +PGG QV+LDDF D  GNLVH TFR GD + F T +YA KTP Q+E E+   AKK
Sbjct:  327 NWISADCDCHDCKRTPFVDSSRV----PFNRRDLSASDGQGDFCLLPDHEVLALYFHDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQED-----KSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDG-----YWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKK 640          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 5.940e-75
Identity = 153/311 (49.20%), Postives = 180/311 (57.88%), Query Frame = 2
Query:   20 NGTSDDCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCD-------QERTGCGQATEAGG-----------------------C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYA 850
            N  S DC+CHDCK   FVD +RV    PFN  DL A DG+G+F LLPDHEV ALYFHDET  KEND+G CQWM   K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ       K V   P  EV+ Q    G G   +        ER+G     + G                        C +   +N  R+    +  G N DG        ++RMC QI    AIHELTS+ HR +VMVFDNSTGHAAYE GAL+A+HI  +PGG QV+LDDF D  GNLVH TFR GD +   T +YA
Sbjct:  781 NWISADCDCHDCKRTPFVDSSRV----PFNRRDLSASDGQGDFCLLPDHEVLALYFHDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQED-----KSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDG-----YWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLLDTHVYA 1077          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5KH16_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH16_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 1.220e-74
Identity = 148/298 (49.66%), Postives = 180/298 (60.40%), Query Frame = 2
Query:   80 TRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQ----------------RGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCG-----QATEA-----GGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEK 883
            T  +  VPFNPHDL   DGRG+F L+PDHEV ALYFHDET  KEND+GS QW+S  K AAIKKKGEGRAAHIS +IGVD GV+ IG+EAWGMMQ                R A +  +  T R F     ++ G   GR   + + G        A E      G C +   +N   +    +  G   DG     R+L+     QI    AIHELTS+ HRQLVMVFDNSTGH+A+ AGAL+  H+ LRPGG Q  L +FED  GN VHTTFRVGD++RFTT ++A KT  ++EAEK
Sbjct:    6 TNTSLRVPFNPHDLLGRDGRGDFCLVPDHEVLALYFHDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRY-ERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDSSTAAVIMTVGQYQDGYWNCARMLE-----QIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEK 297          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.660e-71
Identity = 151/311 (48.55%), Postives = 181/311 (58.20%), Query Frame = 2
Query:   38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRG------------AGRRFKCVTSRPFREVLR---QKGG*G*GRPCDQERTGCG-----QATEA-----GGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEK 883
            C C DCK   F   +RV    PFNP DL   DGRG+F L+PDHEV ALYFHDET  KEND+GS QW+S  K AAIKKKGEGRAAHIS +IGVD GV+ IG+EAWGMMQ                R        P   V     ++ G   GR   +   G        A E      G C +   +N   +    +  G + DG     R+L+     QI    AIHELTS+ HRQLVMVFDNSTGH+A+ AGAL+  H+ LRPGG Q  L +FED  GN VHTTFRVGD++RFTT ++A KT  ++EAEK
Sbjct:  169 CECRDCKRKPFDSSSRV----PFNPRDLLGRDGRGDFCLVPDHEVLALYFHDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPTDGEAPMHWVFPGRYERSGIYFGRKEGEGNDGYAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLE-----QIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEK 470          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 2.880e-71
Identity = 154/313 (49.20%), Postives = 180/313 (57.51%), Query Frame = 2
Query:   35 DCNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRR---FKCVTSRPFRE-----------VLRQKGG*G*GRPCDQERTGC-GQATE------------AGGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAE 880
            DC C+DCK   FV    V+S VPFN  DL A DG G+F L+PDHEV +LYFHDET  KEND+G CQWMS  K AAIKKKGEGRA H+S +IGVD GV+ IG+EAWGMMQ            V   P  E           +   + G   GR   QE  G  G A +               C +   EN   +    +  G N DG        +ERMC QI    AIHELTS+ HR LVMVFDNSTGHAAYE  AL+A+HI   PGG Q +LDDF D  GNLV TTFR GD++ F   +YA KTP Q++AE
Sbjct:  743 DCACYDCKRTPFV----VSSRVPFNRRDLSASDGLGDFCLVPDHEVMSLYFHDETTAKENDDGGCQWMSIEKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQEDMDVLEDVVDLVEVEPATEDGEAPKHGASTLYNGRSGIYFGR---QEGDGVDGHAVKFVQDAVKLLKAMPDDCGVTKTENDPSTGAVIMTVGQNQDGFWN-----NERMCKQIPGLIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAE 1043          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5KS65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS65_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 2.120e-69
Identity = 144/297 (48.48%), Postives = 173/297 (58.25%), Query Frame = 2
Query:   38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQ----------------RGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCG-----QATEA-----GGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTT 838
            C C DCK   F   +RV    PFNP DL   DGRG+F L+PDHEV ALYFHDET  KEND+GS QW+S  K AAI KKGEGRAAHIS +IGVD GV+ IG+EAWGMMQ                R A +  +  T R F     ++ G   GR   + + G        A E      G C +   +N   +    +  G + DG     R+L+     QI    AIHELTS+ HRQLVMVFDNSTGH+A+ AG L+  H+ LRPGG Q  L +FED  GN VHTTFRVGD++RFTT
Sbjct:  151 CECRDCKRKPFDSSSRV----PFNPRDLLGRDGRGDFCLVPDHEVLALYFHDETTAKENDDGSNQWVSVLKGAAINKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRY-ERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLE-----QIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGTLVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTT 437          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 6.770e-56
Identity = 129/294 (43.88%), Postives = 162/294 (55.10%), Query Frame = 2
Query:   38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRG-----AGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCGQATEAGGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQ--VEAEKH 886
            C C+DC      D T+V    PF+  DL A DG+G++ LLPDHEV +L FHDET TKEND+G  QW+S  K AA+K KG+GRAAH+S +IGVD G  QI ++AWGMMQ        G R     S  +      +G  G      QE       T A  C +    N  R+    +  G   DG         +RMCAQ+ A  A  ELT+  HRQ V +FDNSTGH AY+  ALLA+ I L PGGE+  L  FED NG +VH TF+ GD +     I+  KTP Q  ++  KH
Sbjct:  383 CECYDCSREPVFDSTQV----PFDQRDLIATDGKGDYRLLPDHEVLSLLFHDETTTKENDDGDHQWISATKGAAMKVKGQGRAAHVSDVIGVDLGQLQISEQAWGMMQEDYDVLEGGERPTRGRSGKYLGRTEGEGATGHKVKEVQEAVDLLNKTAAD-CEVLKTANDPRTAVVIMTVGKQQDG-----YWTSDRMCAQLPAALATFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKH 666          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.930e-54
Identity = 123/282 (43.62%), Postives = 157/282 (55.67%), Query Frame = 2
Query:   38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCGQATEAGG-C*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQ 868
            C C++C     VD T++    PF+  DL A DG+G++ LLPDHEV +L FHDET  KEND+G  QW+S  K AA+K KGEGRAAHIS +IGVD G  QI +E WGMMQ          T R  +   R +G         + +       +A   C +    N  R+    +  G  HDG         +RMCAQ+ A  A+ EL++  HRQ V +FDNSTGH AY+  ALLA+ I L PGGE+  L  FED NG  VH TF+VGD +     I+  KT  Q
Sbjct:  338 CECYNCMRKPGVDSTQL----PFDQRDLIATDGKGDYRLLPDHEVLSLLFHDETTAKENDDGDHQWLSADKGAAMKVKGEGRAAHISDVIGVDLGQLQISEEVWGMMQEDK----DAGTERSGKYFGRTEGEGEDSHKVKEIQDAVKVLKKAAADCEVLKTANDPRTAAVIMTVGKQHDG-----YWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQ 606          
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Match: A0A6H5KE66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE66_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.200e-48
Identity = 114/258 (44.19%), Postives = 144/258 (55.81%), Query Frame = 2
Query:   38 CNCHDCKCAQFVDGTRVNSGVPFNPHDLDAPDGRGNFYLLPDHEVKALYFHDETRTKENDNGSCQWMSNAKCAAIKKKGEGRAAHISSMIGVDSGVSQIGQEAWGMMQRGAGRRFKCVTSRPFREVLRQKGG*G*GRPCDQERTGCGQA-TEAGGC*LPGDENQERS----LDSGDNHDGGCEPGRVLDERMCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPGGEQVVLDDFEDGNGNLV 796
            C C DCK    VD  +V     F+  DL + DG+G++ LLPDH+V +LYFHDET  KEND+G  QW+S  K A +K KGEGRAAHIS +IGVD G  QI +EAWGMMQ          T R  +   R++G    G    + +       T A  C +    N   +    +  G  HD          +RMCA++ A  A+ ELTS  HRQ V++FDNSTGH AY   ALLA+ I + PGGE+  L  FED NGN V
Sbjct:  197 CECDDCKRKPAVDSAQV----AFDKRDLTSTDGKGDYRLLPDHQVLSLYFHDETTAKENDDGDHQWVSTKKGAPMKVKGEGRAAHISDVIGVDLGQLQISKEAWGMMQEDK----DAETGRSGKYFGRKEGEGVHGHEVKEVQDAVEVLKTAAADCAVLETANDPWTAAVIMTVGQQHDR-----YWTSDRMCARLPAIIAMVELTSGPHRQDVLIFDNSTGHNAYGEDALLAHKINMAPGGEKGALRVFEDDNGNTV 441          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRU6_9PHAE6.430e-8349.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K659_9PHAE1.550e-8149.70Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K527_9PHAE5.940e-7549.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH16_9PHAE1.220e-7449.66Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L669_9PHAE1.660e-7148.55Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ42_9PHAE2.880e-7149.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KS65_9PHAE2.120e-6948.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K550_9PHAE6.770e-5643.88Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJM4_9PHAE1.930e-5443.62Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE66_9PHAE1.200e-4844.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig186contigP-littoralis_Contig186:414806..415709 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FZS5
Model size904
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.13e-18
EggNOG OGs2D16T@1|root,2SGXK@2759|Eukaryota
Cds size309
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789892.9209151-UTR-P-littoralis_Contig186:414805..4154001680789892.9209151-UTR-P-littoralis_Contig186:414805..415400Pylaiella littoralis U1_48UTRP-littoralis_Contig186 414806..415400 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789892.931008-CDS-P-littoralis_Contig186:415400..4157091680789892.931008-CDS-P-littoralis_Contig186:415400..415709Pylaiella littoralis U1_48CDSP-littoralis_Contig186 415401..415709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig186.146.1prot_P-littoralis_Contig186.146.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig186 415401..415709 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig186.146.1

>prot_P-littoralis_Contig186.146.1 ID=prot_P-littoralis_Contig186.146.1|Name=mRNA_P-littoralis_Contig186.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
MCAQILAPFAIHELTSDAHRQLVMVFDNSTGHAAYEAGALLANHIPLRPG
GEQVVLDDFEDGNGNLVHTTFRVGDEIRFTTVIYARKTPGQVEAEKHTQA
KKS
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mRNA from alignment at P-littoralis_Contig186:414806..415709+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig186.146.1 ID=mRNA_P-littoralis_Contig186.146.1|Name=mRNA_P-littoralis_Contig186.146.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=904bp|location=Sequence derived from alignment at P-littoralis_Contig186:414806..415709+ (Pylaiella littoralis U1_48)
CAGCAGTCGTTTGAAAAAGAACGGAACCAGCGACGACTGCAATTGCCACG ACTGCAAGTGTGCTCAGTTCGTCGACGGCACGCGGGTCAACTCGGGGGTG CCGTTCAACCCGCACGATCTGGACGCGCCCGATGGACGAGGGAATTTCTA CTTGCTACCGGATCACGAGGTTAAGGCCCTATACTTTCACGACGAAACCA GGACGAAGGAGAACGACAACGGCAGCTGCCAGTGGATGTCGAACGCGAAG TGCGCAGCCATCAAGAAGAAGGGGGAAGGGCGCGCCGCGCACATCTCCTC CATGATCGGTGTAGACAGCGGGGTTTCGCAGATAGGCCAGGAAGCCTGGG GTATGATGCAGAGGGGaGCCGGCCGACGCTTCAAGTGCGTCACCAGTAGG CCGTTCCGGGAAGTACTTCGGCAGAAAGGAGGGTGAGGGTAAGGACGGCC ATGCGATCAAGAACGTACAGGATGCGGTCAAGCTACTGAAGCGGGTGGCT GCTGACTGCCTGGTGACGAAAACCAAGAACGATCCTTGGACAGCGGCGAT AATCATGACGGTGGGTGTGAACCAGGACGGGTACTGGACGAGCGAATGTG TGCGCAAATCCTGGCGCCGTTCGCCATCCATGAGTTGACGAGTGACGCAC ACCGGCAACTGGTGATGGTCTTCGATAACTCCACCGGGCACGCCGCGTAC GAAGCCGGTGCTTTGCTGGCCAACCACATTCCCCTGAGGCCGGGGGGAGA GCAGGTCGTCCTTGACGATTTTGAGGATGGCAACGGGAACCTTGTTCACA CCACGTTCAGAGTTGGTGACGAGATCCGGTTTACAACGGTAATATACGCA CGGAAGACGCCAGGGCAGGTGGAGGCCGAAAAGCACACGCAAGCGAAGAA GTCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig186:414806..415709+

>mRNA_P-littoralis_Contig186.146.1 ID=mRNA_P-littoralis_Contig186.146.1|Name=mRNA_P-littoralis_Contig186.146.1|organism=Pylaiella littoralis U1_48|type=CDS|length=309bp|location=Sequence derived from alignment at P-littoralis_Contig186:414806..415709+ (Pylaiella littoralis U1_48)
ATGTGTGCGCAAATCCTGGCGCCGTTCGCCATCCATGAGTTGACGAGTGA
CGCACACCGGCAACTGGTGATGGTCTTCGATAACTCCACCGGGCACGCCG
CGTACGAAGCCGGTGCTTTGCTGGCCAACCACATTCCCCTGAGGCCGGGG
GGAGAGCAGGTCGTCCTTGACGATTTTGAGGATGGCAACGGGAACCTTGT
TCACACCACGTTCAGAGTTGGTGACGAGATCCGGTTTACAACGGTAATAT
ACGCACGGAAGACGCCAGGGCAGGTGGAGGCCGAAAAGCACACGCAAGCG
AAGAAGTCC
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