mRNA_P-littoralis_Contig182.110.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.090e-27 Identity = 78/174 (44.83%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKALLKEKSRGDGSSGKKLKLTIPGPARTSAEETPT-TSARSNRVCLSPVS-TASVSTSSFDSETGFEANEP 516
KVL PGLVKG W A+ED L+ + P +WG +S + GRT KQCRER+C+HLDP I++ +T EED+II++TQA LG WS+ A LPGR N+++ + KAL ++ G SSG + T R + T T T+AR +R S S +AS S SSF+S A +P
Sbjct: 157 KVLRPGLVKGQWDAEEDAALMKLAT-APFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKG-AYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGRSGSTSSPAGRAPKKSTGTSTTARQSRELSSSSSLSASESCSSFESGLDTMAEQP 328
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.960e-26 Identity = 63/128 (49.22%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKALLK-EKSRGDGSSGKKLKLTIPG 381
KVL PGLVKG W DEDE L + E +WG+++ R+PGRT KQCRER+ NHLDP I + +T+EED +IL QA LG WS A LPGR +AV+ +WK+L + K +G K K+T G
Sbjct: 135 KVLAPGLVKGHWRPDEDELLKELVAE-GRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGE-YTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGQGRRGQADKGKMTSKG 260
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI) HSP 1 Score: 109 bits (273), Expect = 1.120e-25 Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKALLKE 327
KVL PGLVKG W A+ED L+ + P +WG +S + GRT KQCRER+C+HLDP I++ +T EED II++TQA+LG WS+ A LPGR N+++ + KAL ++
Sbjct: 150 KVLRPGLVKGQWDAEEDAALMKLAT-APFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKG-AYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRK 256
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A024UVV8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVV8_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.430e-25 Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKAL 318
KVL PGLVKG W+ADEDENL+ + + T +WG+IS + GRT KQCRER+ NHLDP I++ P++ +ED ++ A+LG W++ A LPGR ++V+ +WK L
Sbjct: 84 KVLKPGLVKGHWAADEDENLVRLVQNSTTVNWGEISKSIEGRTAKQCRERWKNHLDPSINKG-PYSSDEDMLLAAAYAELGNRWTQIANRLPGRTEDSVKMRWKVL 188
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM) HSP 1 Score: 105 bits (262), Expect = 2.250e-25 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKALLK 324
KVL PGLVKG W DED+ L + E +WG+++ R+PGRT KQCRER+ NHLDP I + ++ EED +IL QA LG WS A LPGR +AV+ +WK+L +
Sbjct: 53 KVLAPGLVKGHWRPDEDDLLKELVAE-GRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGE-YSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.720e-25 Identity = 55/106 (51.89%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKAL 318
KVL PGLVKG WSA ED L+++ + +WG+++A++PGRT KQCRER+ +HLDP + + + +T EED IL+ Q++LG WS+ A LPGR NAV+ +WKAL
Sbjct: 71 KVLKPGLVKGQWSALEDAKLVDLVGK-GFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGE-YTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKAL 174
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE) HSP 1 Score: 110 bits (276), Expect = 4.320e-25 Identity = 55/106 (51.89%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKAL 318
KVL PGLVKG W+ +ED+ L+++ E +WG +SARVPGRT KQCRER+C+HLDP+I + +T EED+II+ Q +G W+K A L GR NA + +WK L
Sbjct: 112 KVLTPGLVKGQWTPEEDKLLVSIVNE-GHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKG-GWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKIL 215
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA) HSP 1 Score: 110 bits (276), Expect = 6.950e-25 Identity = 54/110 (49.09%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKALLKEK 330
KVL PGL+KG W+ +ED L + E +WG++++ +PGRT KQCRER+CNHLDP I++ +TREED++I+ QA LG WS A L GR +AV+ +WK+L++ K
Sbjct: 141 KVLKPGLIKGHWTPEEDAKLRALVAE-GRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGN-YTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTK 248
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A6G0WIR3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIR3_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.210e-25 Identity = 55/112 (49.11%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKALLKEKSR 336
KVL PGLVKG WS +ED+ ++ V + ++WG+I+ ++PGRT KQCRER+ NHLDP I++ P++ EED++IL QA LG WS+ A LPGR ++V+ +WK+L + +R
Sbjct: 264 KVLKPGLVKGHWSFEEDK-ILEVLVKQSVNNWGQIAEQIPGRTPKQCRERWRNHLDPSINKG-PYSEEEDQLILSNQARLGNKWSQIAQMLPGRTEDSVKIRWKSLKQNPTR 373
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.350e-25 Identity = 56/116 (48.28%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERYCNHLDPKIDENKPFTREEDEIILKTQADLGETWSKTALDLPGRNGNAVRRQWKALLKEK--SRGD 342
KVL PGL+KG W+ +ED L + E +WG++++ +PGRT KQCRER+CNHLDP I++ +TREED++I+ QA LG WS A L GR +AV+ +WK+L++ + SRG+
Sbjct: 152 KVLKPGLIKGHWTPEEDAKLRTLVAE-GRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGN-YTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSRGN 265 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig182.110.1 >prot_P-littoralis_Contig182.110.1 ID=prot_P-littoralis_Contig182.110.1|Name=mRNA_P-littoralis_Contig182.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=190bp KVLIPGLVKGTWSADEDENLINVKEELPTSDWGKISARVPGRTDKQCRERback to top mRNA from alignment at P-littoralis_Contig182:437788..439039+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig182.110.1 ID=mRNA_P-littoralis_Contig182.110.1|Name=mRNA_P-littoralis_Contig182.110.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1252bp|location=Sequence derived from alignment at P-littoralis_Contig182:437788..439039+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig182:437788..439039+ >mRNA_P-littoralis_Contig182.110.1 ID=mRNA_P-littoralis_Contig182.110.1|Name=mRNA_P-littoralis_Contig182.110.1|organism=Pylaiella littoralis U1_48|type=CDS|length=570bp|location=Sequence derived from alignment at P-littoralis_Contig182:437788..439039+ (Pylaiella littoralis U1_48)back to top |