mRNA_P-littoralis_Contig180.100.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig180.100.1
Unique NamemRNA_P-littoralis_Contig180.100.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: D7G2Q3_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q3_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 5.840e-40
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 
Query:  221 MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKR 466
            MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVER EAEQAQLYLDGGQLDGN+IKVAFVLVTKKR
Sbjct:    1 MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERAEAEQAQLYLDGGQLDGNRIKVAFVLVTKKR 82
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A7S2XYG7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYG7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 7.780e-31
Identity = 64/88 (72.73%), Postives = 78/88 (88.64%), Query Frame = 2 
Query:  206 PSPPS-MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKR 466
            PSP S MLHV+NLTRNVK +HL+EIFG+YGKV  V+L VD+RVNLPKGYAFVEF +R +AEQAQLY+DGGQLDGN +KVAF+LV +++
Sbjct:   82 PSPESTMLHVANLTRNVKREHLEEIFGTYGKVKKVELVVDRRVNLPKGYAFVEFDKRVDAEQAQLYMDGGQLDGNVLKVAFILVKRRK 169
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A835YNB5_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.240e-29
Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 2 
Query:  221 MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAF 445
            +LHVSNLTRNVKA HL+EIFG YG V  V+LA+DK++ LPKGYAFVEF  RT+AEQAQLYLDGGQLDGN +KVAF
Sbjct:    1 VLHVSNLTRNVKAAHLQEIFGCYGTVAKVELAIDKKLGLPKGYAFVEFSNRTDAEQAQLYLDGGQLDGNYVKVAF 75
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A7S2SUR0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUR0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.370e-24
Identity = 51/84 (60.71%), Postives = 67/84 (79.76%), Query Frame = 2 
Query:  215 PSMLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKR 466
            P  LHV+NLTRN+K  HL EIFG+YGKV   ++ +D+R NL KG A++EF  R++A+QAQLYLDG Q+DGN+IKVA VLV ++R
Sbjct:   14 PMTLHVANLTRNIKEQHLLEIFGTYGKVNKAEVVLDRRTNLTKGLAYIEFSRRSDADQAQLYLDGAQIDGNRIKVALVLVDRRR 97
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A0D9WBU4_9ORYZ (RRM domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WBU4_9ORYZ)

HSP 1 Score: 112 bits (280), Expect = 6.540e-23
Identity = 53/93 (56.99%), Postives = 74/93 (79.57%), Query Frame = 2 
Query:  191 PKRRSPSPPS-MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKR 466
            P++ SP P S +LHV +L+RNV  DHLKEIF +YG+V +V+L++D+ VNLP+GY +VEF  R++AE+A LYLDGGQ+DGN +KV F L  ++R
Sbjct:   54 PRKASPGPDSTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRSDAEKALLYLDGGQIDGNVVKVRFALTPQQR 146
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A0E0N7V2_ORYRU (RRM domain-containing protein n=1 Tax=Oryza rufipogon TaxID=4529 RepID=A0A0E0N7V2_ORYRU)

HSP 1 Score: 109 bits (272), Expect = 1.030e-22
Identity = 48/92 (52.17%), Postives = 75/92 (81.52%), Query Frame = 2 
Query:  194 KRRSPSPPSM-LHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKR 466
            ++ SP+P S+ LH+ +L+RNV   HLKEIFG++G+V +V+L++D+ VNLP+GY ++EF +RT+AE+A LY+DGGQ+DGN +K+ F L  ++R
Sbjct:   60 RKASPAPESVVLHIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLRFTLAPRQR 151
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A1V9Z5I0_9STRA (Arginine/serine-rich protein 45 isoform X2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5I0_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.390e-22
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 2 
Query:  203 SPSPPSMLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKK 463
            SP   + LHV+NLTRNV +DHL EIFG +G V +V+L +DK   LPKG+A+++F +R EAE AQL++  GQ+DGNKI+V FVLV  K
Sbjct:   86 SPDDGASLHVANLTRNVNSDHLSEIFGKFGTVANVNLEIDKSTRLPKGFAYIQFAKRAEAETAQLHMHDGQIDGNKIQVNFVLVQPK 172
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A835PDI1_VANPL (RRM domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PDI1_VANPL)

HSP 1 Score: 105 bits (261), Expect = 3.920e-22
Identity = 50/100 (50.00%), Postives = 75/100 (75.00%), Query Frame = 2 
Query:  191 PKRRSP----SPPSM----LHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKR 466
            PKR SP    +PP +    LH+ +L+RNV   HLKEIF ++G+V +V+L++D+ VNLP+GY +VEF +RT+AE+A+LY+DGGQ+DGN + V F L  +++
Sbjct:   17 PKRASPPRKVTPPVIESVVLHIDHLSRNVNEAHLKEIFSNFGEVVNVELSMDRNVNLPRGYGYVEFKKRTDAEKARLYMDGGQIDGNIVSVKFTLAQRQK 116
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BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A5J4XY81_9CHLO (Arginine serine-rich splicing factor SR45 transcript I n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XY81_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 4.270e-22
Identity = 51/82 (62.20%), Postives = 68/82 (82.93%), Query Frame = 2 
Query:  218 SMLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKK 463
            S LHV +LTRNV+A+H++EIF ++G V  V+LA+DK VNLP+G+A+VEF  R+EAE AQ  +DGGQLDGN++ VAFVLV +K
Sbjct:  134 SRLHVGHLTRNVQAEHIQEIFSTFGTVKHVELAMDKAVNLPRGFAYVEFSRRSEAEDAQRLMDGGQLDGNQLSVAFVLVPRK 215
[Close]
BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Match: A0A0D9VAI8_9ORYZ (RRM domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VAI8_9ORYZ)

HSP 1 Score: 108 bits (271), Expect = 6.950e-22
Identity = 48/92 (52.17%), Postives = 74/92 (80.43%), Query Frame = 2 
Query:  194 KRRSPSPPSM-LHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKR 466
            ++ SP+P S+ LH+  L+RNV   HLKEIFG++G+V +V+L++D+ VNLP+GY ++EF +RT+AE+A LY+DGGQ+DGN +K+ F L  ++R
Sbjct:   92 RKTSPAPESVVLHIDRLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLRFTLAPRQR 183
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q3_ECTSI5.840e-4097.56RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2XYG7_9STRA7.780e-3172.73Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A835YNB5_9STRA1.240e-2977.33RRM domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S2SUR0_9STRA1.370e-2460.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0D9WBU4_9ORYZ6.540e-2356.99RRM domain-containing protein n=1 Tax=Leersia perr... [more]
A0A0E0N7V2_ORYRU1.030e-2252.17RRM domain-containing protein n=1 Tax=Oryza rufipo... [more]
A0A1V9Z5I0_9STRA2.390e-2257.47Arginine/serine-rich protein 45 isoform X2 n=1 Tax... [more]
A0A835PDI1_VANPL3.920e-2250.00RRM domain-containing protein n=1 Tax=Vanilla plan... [more]
A0A5J4XY81_9CHLO4.270e-2262.20Arginine serine-rich splicing factor SR45 transcri... [more]
A0A0D9VAI8_9ORYZ6.950e-2252.17RRM domain-containing protein n=1 Tax=Leersia perr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig180contigP-littoralis_Contig180:359342..368964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2Q3
PFAMsRRM_1
Model size2686
Max annot lvl2759|Eukaryota
KEGG koko:K14325
KEGG Pathwayko03013,ko03015,map03013,map03015
KEGG ModuleM00430
Hectar predicted targeting categoryother localisation
Exons12
Evalue4.37e-44
EggNOG OGsKOG0118@1|root,KOG0118@2759|Eukaryota
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-11_003090.1
DescriptionRNA binding
Cds size933
COG categoryH
BRITEko00000,ko00001,ko00002,ko03019
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789873.042677-UTR-P-littoralis_Contig180:359341..3594211680789873.042677-UTR-P-littoralis_Contig180:359341..359421Pylaiella littoralis U1_48UTRP-littoralis_Contig180 359342..359421 +
1680789873.0557632-UTR-P-littoralis_Contig180:361113..3611511680789873.0557632-UTR-P-littoralis_Contig180:361113..361151Pylaiella littoralis U1_48UTRP-littoralis_Contig180 361114..361151 +
1680789873.0684173-UTR-P-littoralis_Contig180:361690..3617591680789873.0684173-UTR-P-littoralis_Contig180:361690..361759Pylaiella littoralis U1_48UTRP-littoralis_Contig180 361691..361759 +
1680789873.079654-UTR-P-littoralis_Contig180:362018..3620511680789873.079654-UTR-P-littoralis_Contig180:362018..362051Pylaiella littoralis U1_48UTRP-littoralis_Contig180 362019..362051 +
1680789873.1823013-UTR-P-littoralis_Contig180:367431..3689641680789873.1823013-UTR-P-littoralis_Contig180:367431..368964Pylaiella littoralis U1_48UTRP-littoralis_Contig180 367432..368964 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789873.0902083-CDS-P-littoralis_Contig180:362051..3621021680789873.0902083-CDS-P-littoralis_Contig180:362051..362102Pylaiella littoralis U1_48CDSP-littoralis_Contig180 362052..362102 +
1680789873.1010273-CDS-P-littoralis_Contig180:363066..3631381680789873.1010273-CDS-P-littoralis_Contig180:363066..363138Pylaiella littoralis U1_48CDSP-littoralis_Contig180 363067..363138 +
1680789873.1127946-CDS-P-littoralis_Contig180:363938..3640101680789873.1127946-CDS-P-littoralis_Contig180:363938..364010Pylaiella littoralis U1_48CDSP-littoralis_Contig180 363939..364010 +
1680789873.1249304-CDS-P-littoralis_Contig180:364737..3648251680789873.1249304-CDS-P-littoralis_Contig180:364737..364825Pylaiella littoralis U1_48CDSP-littoralis_Contig180 364738..364825 +
1680789873.1353252-CDS-P-littoralis_Contig180:365337..3655331680789873.1353252-CDS-P-littoralis_Contig180:365337..365533Pylaiella littoralis U1_48CDSP-littoralis_Contig180 365338..365533 +
1680789873.1443942-CDS-P-littoralis_Contig180:365964..3660871680789873.1443942-CDS-P-littoralis_Contig180:365964..366087Pylaiella littoralis U1_48CDSP-littoralis_Contig180 365965..366087 +
1680789873.1531177-CDS-P-littoralis_Contig180:366497..3665721680789873.1531177-CDS-P-littoralis_Contig180:366497..366572Pylaiella littoralis U1_48CDSP-littoralis_Contig180 366498..366572 +
1680789873.1625862-CDS-P-littoralis_Contig180:366833..3670051680789873.1625862-CDS-P-littoralis_Contig180:366833..367005Pylaiella littoralis U1_48CDSP-littoralis_Contig180 366834..367005 +
1680789873.1732628-CDS-P-littoralis_Contig180:367347..3674311680789873.1732628-CDS-P-littoralis_Contig180:367347..367431Pylaiella littoralis U1_48CDSP-littoralis_Contig180 367348..367431 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig180.100.1prot_P-littoralis_Contig180.100.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig180 362052..367431 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig180.100.1

>prot_P-littoralis_Contig180.100.1 ID=prot_P-littoralis_Contig180.100.1|Name=mRNA_P-littoralis_Contig180.100.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=311bp
MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVE
RTEAEQAQLYLDGGQLDGNKIKVAFVLVTKKRRQSPSPRSRDAERRERER
ERAGRGRFAAQPRGVFGNGSGSFGGQGGGSHYGPAAGGGGGGSGGYGAMA
AGPGFRGRDRSPPRGDRRGGSFAGSSYAGRARSPPRRRSSPPRNRRVDSK
RSRSPARRRRSPSPRRRSFGNNRSNRSRSRSRSRSRSRTRRRGRSSSSSS
SGSGSGSGSGSGSGSNRSRSRSAGSSSSSSSSQSGGGGKKRSASRSPPAK
TSPGKATAEA*
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mRNA from alignment at P-littoralis_Contig180:359342..368964+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig180.100.1 ID=mRNA_P-littoralis_Contig180.100.1|Name=mRNA_P-littoralis_Contig180.100.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9623bp|location=Sequence derived from alignment at P-littoralis_Contig180:359342..368964+ (Pylaiella littoralis U1_48)
TTCATCGAGTTCTTCCAGCTCGAGCAGCAGCAGCAGCTCGAGCAGCAGCT
CTAACGCCAGCGGGCGCAGTCGAGGGAAACGTGAGTGTTGTTGGCGTTGC
CTCCGGTCAGCCAGAGTCTAAAACAATCAGTGCCAACCCGCCCCTCGTAC
TGATGCTCTGCGTCGTGTCCGGTGCGTGTTGGTGCATGGACGACTTTGAT
GTGTATTCTATGCGAAGATATACTTGTCATGAAATCCTCTCAGAGGCATC
TGCGGCTCCGCGCGCGCTATCACTCCTTCTACACAGCAGTATGCAAACAG
AACAACCACGTCGGAGAGAAGGGGAAAGATATCTGGCAAAGAGCTTGTCT
TGCTGATTCCCTCGGTGTACTGAATACAAGCGTAAATGTAACAGGTGACG
TATTTATCCGTAGACAAAGCAAAGACCTGCAGTCAGTACAGCAGTTGTTT
TTCTGCCCCTCGATGCATGCCGCCACAGGCCCGGCGCAGCGCTCGTAGTT
GCGAGTTCTCGGCGGTTATGACGGTGTATATCACCCCCCTGTAGATATTT
TTTTTTCAACTTAAGAACATCAATGTGTTCTCCTCCCTCCAGACGAGGGT
CCGCAGTAGATATTGCAGCGAACACAAAGAATAAGGTACATCTACATACC
AGTCAGTGTTTCTATAACTCATCAGATAATGTACCGTTGCAGCTCCCCTG
AAGGTATTAGGCTCAACAAGACATTTGAAACCTCGACTACGCCACAGCAG
CAGATGGAATTCCGTAAGGAAGAGGTTGTCTGCCATCAAAGGATGCCCAC
ACCCACGGTCGGCAAGCTCTTGGCGAGGTTGTTGGTTCCATGAATTCAAC
GGAGACCCATCGATCAAACATGCCGTAAAGAAAAGTTTTGAGTAGGCGGG
CACCGTAGTTCATTTGGCGTATCATATAATGTCATACGAGTACGCTGTGT
ACAGCAGCAGCTTTACAGCAGGACAAGTTGTGCCCACTTTTTGGGGCAAT
TGGGGATAAATTCCTTTGTAATCCAAGTCAACCTTTGGTTCACAGCAGGG
AGAGTCAGCGAGACGTGCTTGAGTGCGTGTTTTGTGTGTTTTTTCAGGAC
TGTCGACCTTGGCCATTCATCGGCGGATCGAAACCGGTTAATGCCTCCTA
GTCAATTCTTCAAAGTGTTTCGTACGAAGAATTATACACAAATTCCAACC
CCCTGGGTGCTCAAAGGGTGACGACCGAGCTTTCAACAGGGTGTGGTATA
CACCGATCCTACCCCGGATATTTATATACTACTTGTGCCGGTAACAGGGA
CCAAAACCCGACGGTAGGCTATGATACGCCCCCTGCCTTTGAGAAGAATA
GATACTGCTGCTGTAGCCGTGGACGTTGAACTCGTCGCAGGAAACCGTGT
GCGCTGAACTTGTCAAACGCTTCCGGGCATACACCTGCAGTGCGTGAGCG
GGGACCAAACGTGTTGTCTGTACAGGACATGGCACCGCACATTGTTGTAG
CCACCGACAGAAGAAGCCCCGCTGCCGGGGGCGGTGCCCATCCCTCGTTT
TTCCTCCTAGTGCACGACACGATACGGTGCACGAACGAATTTTTTCCTGG
TTTGTGACCACGGGCTAGATTTTGCCGATGAGCTCATATGTGAGAATCGA
CAACAACCAACAAGTGTGCGCCGGCTGGCATTGTGTACCTCTTTTACAGG
TGTCCCTCCCCTGTCTCTGCAATATTTAATCCCTTAACCCCCCCCTCCCC
CCCCCTGCACCTCAATCACCAGCCTCTGAGGCGGACAAGAACGGGACGCC
TAAAACCAAGGTACGATTGGCATATCATGTACCTGGGATACGATGAGCTT
GCGTACGTTCCCTAGGTCGATCGAAAAATAATTTTTTCGACAAGCTTCTT
CGACAGATAACCAAAACACTGCAAGCGTCGTGTATGTACAAGAGGATATC
AATGAGAGTGCAGAGTTGTTTTTTACTTCCTGCTCGACATGTTCCTTGCG
TTAACAAGCCCTTCGCGTTTCTGTTCTGTTGAAACAAAGGACCGAGGGCA
AGTTGACCCCAGTAAGTGAAGTTTGCACAGAAGCACATTATGGATATACT
TCGAAGTATGAAGCCAAACGATGTACCAACAGCAGTAGCCATCCACGCCA
ATTTGACGGCGTCATTTTTTCACGGTGCCGTTTTTTGTGCATCAATGTAA
GATGCCCCCCTTACACACCGCCATCGTTGACACGAAAGAAAAGTCCGTCT
ATCTTTCCCCCCCCCTCTCTCTCCCTCTCTCACGTTCGCTCTCTGTCTTT
CCTTCGTTGTGTGTGGCGGCACGGGTGCTCCTGCCTCTCCTTGGAGTAGC
CCAGCGATGGCGCGCCCAAGAGTCGTGGTCGCTCTGGATCCCGGTCTGCA
TCTCGCTCCAAGTCAAAGGTAACTTCCGTTCCGGATGGATTCTGCGTGTA
CAGGCCAGCAGGTGTAGCGTCGCTGCATACAGTTTTATCGGGGCATGAAC
GCATGCTCATTGGAATTTGCAACTGGCACAGGGAGAAAAAAGGTTTTCCG
TTGTTATTGGCGTTTTTATGCTCTGCCCAAATTCAGTCTGACTTGACATG
TCGCTCACTCCTCTGTTGTGTACTTTGCCTGTTTCTCGTGTGTGCGTGAC
GTTTACCCGGACGTTTTTTGGGAGAAGTCGCCCAAGCGTCGCAGCCCGTC
CCCTCCCAGCATGCTCCACGTGTCTAACCTCACCCGCAACGTCAAGGCGG
ACCATCTTAAGGTGAAAAAAACTACGAAGGTGGTACCCATTTTGCTCGTA
TCGCTGTACCGTCCGTCTTTAACCTCATGGCGTTATTTATTTTGGCTTGA
ACCAGTCCTTGTGATTCGTATCGGCGTGTGCTACTTGTATCACACTGCAG
TACTGCTGTAGGCATATTTTTTTTCCGCTCAAATGATGTTGGCTACAGAC
ATGCATTGATTTCATATTGCTGAATACTTTTACGGTTTGTTTAAGACTGC
TTAGGTTCGGAGTCTGCTGAGGTGTACCGTCTGGCTGTTCTTTGCATCTG
CGAGGCTCAAGATATCTGATGGGACCCCGTGGATCACGAGCGCGCTCACT
CCCCTCTTCGTTTTGTGGTTGCCGATAATAGTTTTGATGTTTGTACATCA
AGACCACCGTTCCTTTCTATTTCTAACTTGAAAAAAAAAAAGGCAACTGG
TGGTGGTTGACATTTGTGTGTGTCGGTGTGTCTCTGTGTGTGTGTGTGCG
TGTCTCAATGGCATTTGTGCATCTCAACCACCCCAACGTACCATTAGCGA
AGACAACGCGGGGTGTCGTGGTGTGTTTGGTCTTGAACGACCTCATCCCT
CGAAAGTGTGGTTGTATCTTAAGGCGGCATGTCGGCAGGGTAGTTGCCTC
TCGTTGGCAGCCGCCGCTTTCGGAGTCCATTGATGATCCCGTGCCCAACG
ACTCTGCTATTTTCTCCAAATGCTTCAAGTGGGAACGGACCCTGTGTCTT
CCCCTTGTTCTCTCGCTTTCGGGGTTTGGTGTTATATTCTTCCTTCGCCG
GCGTGTGAGGTGTGTTGTTGTGGCAGCCCATGACCGGGCCGGCTCGATCG
GGTCGTATCCTCGACGATACTGCTGCTGCTGCTGCTGCTGCTTGTTCCGT
GACTCGATTCGCTCCCCCCTTGCTTGTTCCCCCCCTGCCCTCTGCTTCGC
TGTTTCGTTTTTGTCGCGCACTCAGGAGATCTTCGGGTCCTACGGGAAGG
TGACCTCCGTGGACCTCGCCGTGGACAAGCGCGTCAACCTTCCCAAGGCA
AGGCAACCATTTGTAAATTGTACCTGGTATGTTTGTAGCTGTCGGATGGC
TACCGGCTCTGCACCTACAGCCGTACCGTAGGTTGAATAAGATACCACAC
CCCCTGGACCAATTTTCAGAGAGCACAGGGTTACTCCACACAGCGGAAAG
AGTGTGGGTGCCGGAAATGCGGCGTCGAACCATCTCGTCGAGAGCTTTCC
AAGAACGTACCGTTTGATGCTGGCAACCTCGTCGTTGTGGAGTAGTTGAG
GTTTGAAAATCGGTCCGGGTGTGTGTTGTCTTATGCGACGTACGGTACCT
GAGGCTGTCTGGGCAAGACACAGTGCGCTGATGAAAAACGTAATAACCTT
TGATACAACGTGGTGACAATGTTGTACAGCGAAGGCGCTGCCACGTCAGT
ACCGATTTGTTGTCCCGTGTAGGGGCCCGTTCGCGCACTCTCGAGCCAGT
CACCCTCTGACGTCGGACCCCATTCCATTGTCCCACCCGAGAACCACTCT
TTATTCCCCGCCCCAGAAGCCACGCCCCCTGTCATGATACGATGTGTAGG
TTGCTTTACCGAGCTGGGTGATATGATTGGGTGCACACGCCTCGTCCCGT
TTTCCGGCCGCTACTCTCTCTCGCCCCCCTCGGTCTCTCTCGAACATACT
TCATCTAGAGCAGCACGAACACGTGGCATGTTCCGGTTGTGTGTCATCAT
ATCTGAAGTCGTCCCTGGGATTCTCTCGTTCCGAGACGATTTTTTTTGTA
TGTTAATGTCTGCGTTCTTGGCCGGCCGGCGCTCACATGTGCTCCAGGGT
TATGCCTTCGTGGAGTTCGTGGAGAGGACGGAAGCGGAGCAGGCACAGCT
GTACCTGGACGGAGGGCAGGTGAGATTCGAAAATTTCAAGGATGGCTGTG
CGATGATGCCTCGGGAACGCCTTTTAGGGCGCCGGGGGGGAAGGGGGTGG
GGGGGGGGGGTCGGTGATCCGTCGCGTGCTCCATGTTAGAGTTTTTCCGA
GTATTCCTGATCGTATTCGGGACAAATCTGAAAGTTTGCTCATCACCTGT
TTTTGTCACATTTAATCGCAGTTTATTTCTCCGTGTGTTTTGGGATATAT
TTCTGCTGAAGGTTTGGCCAGCTTGGGCAGTCGTTTGTCGCGTATGTAGA
ATGGGTGTCGGAATCGGTTTAGTTTCATCACACGAGGAACATTTTTTGAG
ACTTGACATCAAAACAAAACCATGAGTGTTTGGAGCTATGCAGGGATCGG
CTTAGTATCTTCACGCGAGGAATATTTTGTTTGAAACTGATGGGTGTTTG
GAGCGATGTGGGTTGAGGGCTACCGGCCTGGCCGCACCTTCCAGTGCTCC
ATCACTGTCACCACGACCTAGAAACAAGAGGAGTCATGTTTCACTCAGGC
CGACCAAGTTTTACCATCATCGTCGTGCGTTTGTTTTGCTTTTATTTTGT
TTTGGTTTGAGGGAACTGAATTTTTTTGTTTCGACAACCAACCGTCGACC
ATCGTCACTACGTGTGTGGCATGTTTTGTTGTTTTTGTTGATTTGAGCGG
ATTGAATCCAATCGTTTCGCCATCGTTACTATGTGTATGTGCCCAGCTGG
ACGGGAACAAGATCAAGGTCGCCTTCGTCCTCGTGACCAAGAAGCGCAGG
CAGTCGCCCTCCCCAAGGTCCAGGGATGCCGAGCGTGAGTGCCGACGCAA
CGTTTCTGCAGCGTGTCGTGTGCTATCTGCTGCTCCTGCTGTACGTACGT
AGATATGTACTTCGATGTAGTACGTGCGTATCTATGTATGTATGTAGAGT
GTGTACGTGTGCATGTTCGTCTGCCCTGGCAGGTGGCGGTACCTTTTTGA
CTTACAGCACCTTTCTGGTTCTTACGCATGAGTAGGCGTTTTTTTTGTGC
CAGGAACCCTTGTTTCTCGCTCGGAACGAGTCATGTTACATGGAGTCGGA
CGGAAGCTTACACGTGTCAAGCTAGTTTTGCGTAGCCAACGGTCCGAACC
AGAAATTAAAACGGTGATACGGTTGGTCTCACCTGAGGCGCTAGTCAATG
GTCCGAAGACACGACGAGAAAATTTACAAATAAGCCCCCCCCGCCGTCCC
TATATCCAACACCTCAAATGCTTTTTCCACACGAATCATcCCCCCCCCCC
TCCCGATCTTCATAACGCCTGCACGTGCAACCAAAAAAACCATCAGGGCG
AGAACGTGAGCGCGAGCGCGCCGGGCGGGGACGTTTCGCTGCCCAGCCCC
GCGGAGTCTTCGGCAACGGCAGTGGAAGCTTTGGAGGCCAGGGAGGTGGC
AGTCACTACGGACCTGCGGCAGGAGGCGGCGGCGGCGGCAGTGGTGGTTA
CGGTGCCATGGCCGCGGGCCCCGGGTTCCGCGGGAGAGACCGGTACGTGC
GGGCGTGTGTATGCTTGAGGTGCTTTGGGGTGTTAATAGTGTGTGGGTTT
GGATATGCGGCTTTTCTGTGTCTCGGTAAGTTTGCGTGTGTGCCAGAACG
CTGGATGGCGGGCCCAGTGGTAATTCTCTGCTGCAGAGCAGGGTCGGTTG
CTTCAGTCGCAAAGGGTCGTCGTCGCTGGTGTGTTGTTGTTGCGCTTTTT
GCTTTGCTAGCATGTCCCTATCGCCGCCGCCGCCACCCCCACAACAGCGT
TCTGTCTCCCATTCGAGGCCAGAGCTCGTGACAGCTCATCGTGGATTCGA
TACTACAAGGATTTGAGATGCAATCATCGGTTACTATTGCCAATATGTTC
GTCATCATCCTCACCGTCATCTTCAATTCGTCACCAATAACCATCACTAC
CAACCTTCTCTTTTTTTTTTCAGGTCGCCGCCCAGGGGCGACAGGAGGGG
AGGGAGCTTCGCCGGCTCTTCCTACGCCGGACGCGCACGGAGCCCCCCTC
GGAGGCGGTCCTCCCCACCCCGCAATCGCCGCGTGGACAGCAAAAGGTAA
GAGTGCTGAGGGTTTCCCCACAATCTGGCTTTCTCCATTTTTTGTTCGAG
AGATAATTTTACTGTCACATGGAATAGAAGAGCGGCCATCTGAAAGGGAC
TCAGGAAATTTGTGTCCTTTTTTTTTCTGTACTATTTTTTTTCGTGTGGA
AGTCTCACGGCTACCAACGTGTGCACATGACGAGGATCAGAGTGGTGCTA
CGTGCAGTAGTTGCGGCCAGCAGATGGTTTGGAGCCCGTAGATATTACCA
CTTAAAAAAACAGGGGGGGGCTAACCGATATCTCTTCCACTCCCTCTTTG
CACCGCGAAGATAAAATCGATTGGTTCATTTTACCCAAGTCTCCGTCATC
AACACTCTATTCCATTTCTTGACTGTCGGTGTGCATGTACGTATCGTGTG
CAACAGGAGCCGCAGCCCGGCTCGCCGGCGCCGGTCTCCATCACCCAGGA
GGCGTTCTTTCGGAAACAACCGTTCAAACAGGTTTGTACGTGTGTGCGTG
CGTGCTGTGTGCGTGTGTGTGCGTTTGTGTGCGTTTGTGTGTTGGTGTGA
CACTTTCATCGCCTACTCTAAGGAAAACGAGGCGAAGCCCCCCTCCTACG
GCGGTCGCACTGAAGCGCCTACGAGGAACGAGAACATCTACGATCCTCGC
CCGCGGTAGTGCTTTTTTTTTTCTTCTCTAATCAACGCCCGCACCTGCAA
CTTTGTGTTCGTGGTTGGGTGTGCGTGTGTGTCTGTGTTCAGGTCGCGCA
GCCGGAGCCGGTCTCGCAGCCGCAGCAGGACGAGGCGCCGCGGACGCTCG
TCCTCTTCCTCTAGCTCCGGGAGCGGCAGTGGCAGTGGCAGCGGCAGCGG
TAGCGGTAGCAACCGCTCGCGTAGCCGGAGCGCTGGGTCAAGCTCAAGCT
CTTCATCAAGCCAGGTGAAAATTGTTTCACGTCGTCAAATCAATCCTCGG
GGGGTAGGGTTGTAGCTCAAGTACTTGAACATTGTTTTTTTATTACGGGC
GGCGGCAGTGTTTGCGGCGTCGTCCGGGATTTGATTTGATTTGAGTTGAT
GTGATTCGAGGGTTCTGTTCTTGCACTCTCGTCAAAGTTGTGGTCTGACT
GAAATAGACCGTGTTGTGGGCTTGCTCTCTTGGTGCCCCTCGTCCATTTC
GCTCATGTCTTGGTTTGATATTCAAGTAAATCATCTTGTGTTTTGTCTCT
CGTAGTTTCCGTCATTTTTACCTGACCTGCCGCGCTCTCTTCGTGTGTCC
ACACAGAGCGGCGGTGGCGGTAAGAAGCGATCGGCGTCTCGCTCCCCCCC
GGCCAAGACCTCTCCTGGGAAGGCCACTGCCGAAGCGTGAGCCATGCGTT
CGTCGTCGGCGGGTGCGTGGCACAAGAAGCACGAAGCCGAGCCAACTAAC
TCAACGAATAGCACGAGCGAAAGAACGGGGTGTTTGCACGCTGCGCCTCC
GCCTGATCTCTGCGGCAGACATGCATGCCGACGAGCAACCGCGGGCAACG
AACAGGGCTGGCTAGAATATGCACATCGAGCCGCTATCACCACAGGCGTA
AAAACTCTGTGCGACTGAGCGGTTTGCTCTGTTTCCAAGAGGTGGTCTTG
ACGGTGTGTACGTCACAGGAGCGAGTTGCAGGGTATGTGGGGCGAGGGTT
CGAAGAACATGCTGGCCATGCAGCTTGGGAGAGCTTGACGGAGTTGTTGT
GTGTTTCGGAAGGACGAGCGTCGTGACTTCATGTGAGGCGGTGGGGGGCA
TGTTTCGCCACTGCCCCGACCCGAAAGTTGCCGCGTTTTTTTACGCTTCG
CTGCTTTTAAAGTCTCCACACCTTTCGAGCCGGATGTTGTTTGGCAGTCA
GGCCGAGTGCTCTCGATCGTGCGTATTGCGCCGCCGTACGGTTAGACTAC
GGTTGTCTACGGTTGTCTCCGCGCCAGGCTGTCAGTCCTCTTACTTCTAG
GAAGTTGGAAAATGCCCGCGTGGGGCTTGACTCCGGACTCAGTTGCGCGA
GCTACTGATCGGTTCGAAGACAGGCGGGGAATTTGTGGGTGTAGGCACAA
CGGGAAAAAGATACTTCATACATAAGTAAACACCTGGTATTTGGGTTGTT
GCGCACACGTATCGTGTAACACGTCGCTGGCGACGACGTGGAGACATTCG
TACGGTCCAGTTCATCTCTCTCTCGAAATATTCTAGGTTGTAGAAAAATC
AAGAAGAGGGGGTTACTGACGGGCAATATCACACGATGGCGTGTTCAACA
CACAGCAGCGACAAACCGACCATGAGGCAGCTGGAGTCAAGGAAGGGCAG
TAGCTGTGGTTTCGTTTTTTTTGTCTTATGGAGACTATTATACAGCATTT
TGGTCGTCCAGCTCAAAAAAAATGCGCGGCCGTTTTTTTTTGTCTTCTTG
AATAGGATCACTTTCGATTTATATGGAGTTTTGTTATTCACAGTTTTTTG
TACCTCGAGCGCATTGACTGGTGGCCGTTTAGCCTCCTTCTCATGTCTGT
TTTTCGTTCAGTAGTTGTAGTGATGGGTCGGGGGTGGCGAACTCGATCGA
GCAGTTAGAGAAATAAGGAAGGCAAATAAAAACAAGCACGAGAAGGAAAA
AGGGTATTTATGATATGTAGGTTGGAATTTAGATCTGGGTAGGATACATG
CATACAAGTGCATGCGGCGAAAAGACACAAAGGAAGTGGGTACTGCTGTA
GAGAGTTATCAAGAAACGAAGCGAAAACGAAAACACCTTAGTGTATGTAT
GATGTATGATCCGACTTTCACAACAATGTATCCAATGTACTTCAAAGCAT
GTGTTTGGTGACGACCGTGCCTCTTCACGAACGCGACACCACATTCATAT
CCATTATTATTGTCGAATCCTCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig180:359342..368964+

>mRNA_P-littoralis_Contig180.100.1 ID=mRNA_P-littoralis_Contig180.100.1|Name=mRNA_P-littoralis_Contig180.100.1|organism=Pylaiella littoralis U1_48|type=CDS|length=933bp|location=Sequence derived from alignment at P-littoralis_Contig180:359342..368964+ (Pylaiella littoralis U1_48)
ATGCTCCACGTGTCTAACCTCACCCGCAACGTCAAGGCGGACCATCTTAA
GGAGATCTTCGGGTCCTACGGGAAGGTGACCTCCGTGGACCTCGCCGTGG
ACAAGCGCGTCAACCTTCCCAAGGGTTATGCCTTCGTGGAGTTCGTGGAG
AGGACGGAAGCGGAGCAGGCACAGCTGTACCTGGACGGAGGGCAGCTGGA
CGGGAACAAGATCAAGGTCGCCTTCGTCCTCGTGACCAAGAAGCGCAGGC
AGTCGCCCTCCCCAAGGTCCAGGGATGCCGAGCGGCGAGAACGTGAGCGC
GAGCGCGCCGGGCGGGGACGTTTCGCTGCCCAGCCCCGCGGAGTCTTCGG
CAACGGCAGTGGAAGCTTTGGAGGCCAGGGAGGTGGCAGTCACTACGGAC
CTGCGGCAGGAGGCGGCGGCGGCGGCAGTGGTGGTTACGGTGCCATGGCC
GCGGGCCCCGGGTTCCGCGGGAGAGACCGGTCGCCGCCCAGGGGCGACAG
GAGGGGAGGGAGCTTCGCCGGCTCTTCCTACGCCGGACGCGCACGGAGCC
CCCCTCGGAGGCGGTCCTCCCCACCCCGCAATCGCCGCGTGGACAGCAAA
AGGAGCCGCAGCCCGGCTCGCCGGCGCCGGTCTCCATCACCCAGGAGGCG
TTCTTTCGGAAACAACCGTTCAAACAGGTCGCGCAGCCGGAGCCGGTCTC
GCAGCCGCAGCAGGACGAGGCGCCGCGGACGCTCGTCCTCTTCCTCTAGC
TCCGGGAGCGGCAGTGGCAGTGGCAGCGGCAGCGGTAGCGGTAGCAACCG
CTCGCGTAGCCGGAGCGCTGGGTCAAGCTCAAGCTCTTCATCAAGCCAGA
GCGGCGGTGGCGGTAAGAAGCGATCGGCGTCTCGCTCCCCCCCGGCCAAG
ACCTCTCCTGGGAAGGCCACTGCCGAAGCGTGA
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