mRNA_P-littoralis_Contig18.136.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: D8LS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS35_ECTSI) HSP 1 Score: 770 bits (1989), Expect = 1.190e-263 Identity = 456/738 (61.79%), Postives = 525/738 (71.14%), Query Frame = 1
Query: 634 KTDTAAMQTVAKAAAESLKNEMQPQVDALWDAVKWMEDHIETIDADRRDGLENASRVAAQNTAKVEVAKMERERMKLALEDRPLRSEFEALNELHGDRLRTAETELRRLVAELSNRVQEELHAKIDHLYEDTSGWKKRLDKAMKGVDERVRLLEQGLDDEIRSELGEHDFSDESLSSEDGGTPDHNLTQSPSGLMSPRSARIXXXXXXXXXXXXXXXSVLMQRVRNKRESGFQRKIDSAVSTAKNAEVELSSGIAKLRTEFAELLLRMEEGELQKDQYVREVDGRVCEGGQEVEVRLTRIKDDLLEELASTQMQIEKLEMQQEKAVTPEILNEVLRGSDAIRDVAVKAFSLEECISALSASLKAAEKKLVQVDMASSQGISEAERRMSSRVQTVTNAQTAAHEELEKQVLKLKENKADEDCLRETRDDLTQRLRTLENITAAAKQEMIDQLKSEVDAILYRVLEVENMTEAVRADLSPEIAVLEDGVERVHIFLKKTLEDHQRILDTQDTKVAGFSGEVSEACSSVRADVRNMLVCLVPNNRRRELERDDNSEGEATLAEVATAVREMQQRREESSRRVERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEAFAEASCRAEAASEEQDRFVLSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDFVVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMS 2847
+ + A M+ VA+A+ ESLKN + PQV+ALWDAVKWMED +E IDA+RR LE+ASR AAQNTAKVEVAKMERER+KLALEDRP+RSEFEALN+LH RLRT ETELRRL+AELSNR+QE D S++G S TP PS MSPRSAR S+LMQRVR+KRESGFQ+KID A+S +KN E+E+S+ IA +R E A+LLLRMEEGELQKD++VREVD RVCEGGQEVE+ L+R+KD+LLEELAS QM+ EKL MQ EKAVTPEILNE LRGSD IRDVA KAFSLEE +S+L ASLK EKKLVQ + SSQGISEAERRMS+R+QTV NAQTA HE+LE +++KLK+N AD+D L+E RD+L RL TLEN+T A KQE+ID L SEV+ I YRVLEVEN+ EAVR DLSPEIA LE+GVE VH LK+ LEDHQRILDTQD K VATAVRE QQRREESSRRVERAN+ LT+LVKKLER LFVL SRDLFWE +G KL AHAEAFA+ASCR EA SEEQDRFVL+ +LQ Y++GNTQRVAKLICQKADFE+IQKL AS NIEK QDWDRRVQ+MRG FLE FV ARRYL++K+P+HGPFG RNRDRFF+K+EQGLKV S
Sbjct: 92 RAEKAVMKAVAEASTESLKNTIHPQVEALWDAVKWMEDRMEAIDAERRGELEDASRTAAQNTAKVEVAKMERERIKLALEDRPVRSEFEALNDLHEGRLRTTETELRRLIAELSNRLQES-------------------------------------DSSEDSQVGYRKMS----------TP-----TDPSLWMSPRSAR------RTPRSGRGRRSILMQRVRDKRESGFQKKIDQAMSISKNGEMEISAAIASIRAELAQLLLRMEEGELQKDRFVREVDDRVCEGGQEVEISLSRMKDELLEELASHQMETEKLSMQVEKAVTPEILNEALRGSDTIRDVATKAFSLEESVSSLLASLKNTEKKLVQANETSSQGISEAERRMSARIQTVANAQTAVHEQLENKMIKLKDNTADKDSLQEMRDELALRLTTLENVTTAGKQEVIDLLTSEVETISYRVLEVENLAEAVRTDLSPEIATLEEGVESVHGILKRALEDHQRILDTQDAK-------------------------------------------------VATAVREQQQRREESSRRVERANLSLTLLVKKLERSLFVLSSRDLFWEEVGTKLKAHAEAFADASCRVEATSEEQDRFVLTVELQQYIAGNTQRVAKLICQKADFEVIQKLTASTNIEKGAQDWDRRVQSMRGSFLEHFVANARRYLDRKYPSHGPFGARNRDRFFVKLEQGLKVNSS 722
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: A0A7S3USE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE9_HETAK) HSP 1 Score: 145 bits (366), Expect = 2.630e-35 Identity = 85/216 (39.35%), Postives = 123/216 (56.94%), Query Frame = 1
Query: 2290 EGEATLAEVATA-VREMQQRREESSRRVERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEAFAEASCRAEAASEEQDRFVLSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDFVVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKLD-PCCIACDRPF 2931
EG+ L E A +R + EES R ER+++GL L ++ E + + S+ LFWEA+ +L AH + F + C EA S F LS + Q Y++GN QRVAKL+ Q+ADFE I+++ S + E E DWD +V +R + +F G Y K+H + R RF K++Q +++A+SK+ V G TLFGK P C+ACDRPF
Sbjct: 11 EGQQALLEGGLAELRRRARAAEESCGRTERSSVGLAALCRQAEGQVRAIASKSLFWEALQARLQAHLKGFGDRCCELEANSSAAHAFSLSPEAQRYLAGNAQRVAKLVGQRADFETIRQVSTSRHPEDE--DWDTKVDQLRQKYRAEFTQGVEAYAAKQHRSGDTVVLDTRRRFLAKLDQAVRLALSKFNKVQPGLTLFGKRSAQVPACMACDRPF 224
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: A0A836CLL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL5_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.980e-30 Identity = 110/317 (34.70%), Postives = 151/317 (47.63%), Query Frame = 1
Query: 2368 VERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEAFAEASCRAEAASEEQDRFV-------------------LSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDFVVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKL-DPCCIACDRPFGPAAQ-------ATLGDARSAPLEP-LPTAHAVKDAMAGRPRT----PVTTQDG---MRAPDPFID---PATAAGFGGGRH-----------QKGASKFVYRGGFKIPK 3171
++R+ + + ++++E L S+ LFWE+ KL AH E A S + EAA+ L+ D ++GNTQRVAKLI KAD+E+I+ + + + EG DWD RV+T+RG FL F AR L K+ P GP R RF +V+ L+VA+SKYR G TLFG+V++ C+ACDRPF AA A G +A P LPT ++ RP T P G + D ++ P A FG G QK +VYRGGFK+PK
Sbjct: 713 LQRSGVANALALRRVETAFQSLASKGLFWESTDIKLAAHVEEVARVSLQVEAAAXXXXXXXXXXXXXXXXXXSAPPGAPHLAPDALRVLAGNTQRVAKLIAAKADYEVIRLVSRAEDPGAEGHDWDARVETLRGAFLAQFSADARNVLRKRAPHQGPAAEAARGRFLARVDGALRVALSKYRPTTPGATLFGRVRVVAQACVACDRPFATAADGLPCAVSAPPGGNHAAAKPPALPTETSIAVRNNFRPSTCTGSPTKRSGGGVEVNGDDGDVESEVPLHVAPFGFGXXXXXXXXXXSDVQK-PQAYVYRGGFKLPK 1028
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: A0A7S1XP55_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP55_9STRA) HSP 1 Score: 119 bits (298), Expect = 7.860e-24 Identity = 107/396 (27.02%), Postives = 186/396 (46.97%), Query Frame = 1
Query: 2074 AVLEDGVERVHIFLKKTLEDHQRILDTQDTKVAGFSGEVSEACSSVRADVRNMLVCLVPNNRRRELERDDNSEGEATLAEVATAVREMQQRREESSRRVERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEAFAEASCRAEAAS--EEQDRFVLSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDF--VVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKLDPCCIACDRPFGPAAQATLGDARSAPLEPLPTAHAVKDAMAGRPRTPVTTQDGMRAPDPFIDPATAAGFGGGRHQKGASKFVYRGGFKIPK-------GLTPMPSVESFIAELGGPT 3228
A ++ G++R L+ T DH ++ + ++ + + A+ + + L+ +R+ L D +++ E+ A++E ++ +E R+E + L+ KL++ + +L ++ E + +L A + +E S E +F L ++L+ ++ TQR AKLI KAD EI +++I P+ + +DW+ + R ++ V A++ K P R ++ KV LK+AM+KY +V GNT G++KL C+AC+RPF + T GD RS + LP AH D R+ + G P P +A FG +SKFV+RGGFKIP+ G+ +V + +G PT
Sbjct: 178 AEVKGGIKR----LEATTRDHALDIEDNRKEANRLDKKLMKVYNDALAEQKAAALQLLEVHRQERLSVD------SSIEEIVGALKEQREESKEEFLRMEETQERESALLHKLDKNVHLLLTKSNKLELINERLRAEEAELVKIGLFSETRSLDSEYQQFKLGQELETKLATATQRTAKLIAAKADIEITRQVI--PHADPATEDWEEMISDTRSRLVDTIYTTVFAKQTEASKFPRD-TVAMEIRQKYMDKVLMALKIAMTKYSNVQPGNTFLGRMKLQMSCMACNRPFKESN--TPGDQRSISRDRLP-AHGRGDDDLSSVRSSASAGLGSVHP-----PGSAMSFGSRGGSSQSSKFVFRGGFKIPRPKTSASLGMGSRGAVNTLNIPVGSPT 552
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: D7G4P4_ECTSI (Myosin-like antigen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P4_ECTSI) HSP 1 Score: 107 bits (267), Expect = 2.930e-20 Identity = 76/270 (28.15%), Postives = 129/270 (47.78%), Query Frame = 1
Query: 2368 VERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEAFAEASCRAEAASEEQDRFVLSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDFVVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKLDPCCIACDRPF----GPAAQATLGDARSAPLEPLPTAHAVKDAMAGRPRTPVTTQDGMRAPDPFIDPATAAGFGGGRHQKGASKFVYRGGFKI 3165
+ER+N+ + +++L+R L L +++ W+ + + H + E A+ + F L +Q ++S +Q VAK++ +AD+E+ ++ + N E DWDR+V+ +R F+ FV + +K P R+ F K+E +K+A+SKY+ + G T+ GKV L P C+ACDRPF GP GD RS V+D R R+ + + + + GG + K+V R GFK+
Sbjct: 154 LERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEPFSLGPAMQKHVSAVSQMVAKIVATRADYEVTRQAVNRKN-PGEDSDWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRPVEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHLLPSCMACDRPFIDNPGP------GDPRSV----------VQDHRGERERS---RERALERGGGSPSGGSRGQWNGGGRDRSPHKYVMRSGFKM 403
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: A0A6H5L1L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L3_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.130e-19 Identity = 108/417 (25.90%), Postives = 186/417 (44.60%), Query Frame = 1
Query: 2176 FSGEVSEACSSVRADVRNMLVCLVPNNRRRELERDDNSEGEATLAEVAT------------AVREMQQRREESSRRV---ERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEAFAEASCRAEAASEEQDRF----------------------------VLSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDFVVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKLDPCCIACDRPF-GPAAQA----TLGDARSAPLEPLPTAHAVKDAMAGRPRTPVTTQDG---MRAPDPFIDPATA------AGFGGGRHQKGASKFVYRGGFKIPK------GLTPMPSV-----ESFIAELGG 3222
FS +V ++ + +V +L + N+ E D + + T ++AT V+++ + E+ R+ ER+N+ + +++L+R L L +++ W+ + + H + E A+ + F LS +Q ++S +Q VAK++ +AD+E+ ++ + N E DWDR+V+ +R F+ FV + +K P R+ F K+E +K+A+SKY+ + G T+ GKV L P C+ACDRPF GPA + T+G++ + LE +P +A+AG R ++ P F+ A+ +G GGGR + K+V R GFK+ + GL P V ES LGG
Sbjct: 125 FSAQVRQSARELSGEVDKLLALVQKNHT----EFDSHVKSSRTFIKMATDQQASLGKTSKNLVKDIDNLKAENGDRMVSLERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEPFRPHHHLTPLSSNEFLATRRKASAVCVPLSLSPAMQKHLSAVSQMVAKIVATRADYEVTRQAVNRKN-PGEDSDWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRPVEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHLLPSCMACDRPFIGPAIRGRSCKTIGESENV-LESVPW-----NAVAGLQRGGAGVNGSPAALQQPHLFVCEASGCGRMCQSGNGGGR-DRSPHKYVMRSGFKMRQSASEGGGLVAHPRVAAGGDESLEDILGG 529
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: A0A8J2S9U3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9U3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 6.920e-13 Identity = 91/369 (24.66%), Postives = 155/369 (42.01%), Query Frame = 1
Query: 1912 DDLTQRLRTLENITAAAKQEMIDQLKSEVDAILYRVLEVENMTEAVRADLSPEIAVLEDGVERVHIFLKKTLEDHQRILDTQDTKVAGFSGEVSEAC-SSVRADVRNMLVCLVPNNRRRELERDDNSEGEATLAEVATAVREMQQRRE--ESSRRVERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEAFAEASCRAEAASEEQDRFVLSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDFVVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKLDPCCIACDRPFGPAAQATL------GDARSAPLEPLP 2991
DD Q L TL N +M D L ++ A+ RV +V++ T I + E+ +R I E+ Q++ K E E+C +V A + +C+ G+A V+ R + R+ ++ R+ R+ + V VK+++ +D+ + + L+ H A+ AE+A + L + Q +++ Q ++ + +AD E ++ LI + WD++++ R L F K HPT+ R RF +++ L+V +SK+ V TLFGK KL P C+ACDRPF A G ++S P+E P
Sbjct: 414 DDKLQNLATLVNSRVG---KMGDDLLAQGMALTDRVNQVQDTTHR-------SIRIAENAEKRSEICE----ENVQQV----SAKALRSVAEARESCLDAVNAATNEVRICV----------------GKADKLGVSIEERWSEHERDYDDAMARLHRSLVAQAVAVKQIKHMAGSAVLKDMAGDRLDAILDEHVSELAKHCVEAESAVISEREMSLPVNEQKWLAATIQHCSEALATRADLECLRGLIGHVEPPETSDLWDQQLEKNRARLLRSFCERLDEAAAKLHPTNDHMAEATRRRFNERLKLCLRVGLSKHDPVRPNMTLFGKTKLGPACVACDRPFDTPTDADAAITQMKGGSKSEPVERRP 748
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: A0A7S3JPN6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPN6_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.390e-11 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 2719 LEDFVVGARRYLNKKHPTHGPFGGRNRDRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKLDPCCIACDRPFGP 2937
+ F+VG R+ NK HPT RD F +++ GLKV +SK++ + TLFGK++L P C+ACDRPF P
Sbjct: 4 ISKFIVGVRQAANKLHPTTDTKVQSTRDLFLSRLDLGLKVGISKHQKIQPNYTLFGKLRLKPTCVACDRPFAP 76
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Match: W7TB27_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB27_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.740e-7 Identity = 55/205 (26.83%), Postives = 102/205 (49.76%), Query Frame = 1
Query: 2365 RVERANIGLTVLVKKLERGLFVLCSRDLFWEAMGNKLNAHAEA--------FAEASCRA---EAASEEQDR-FVLSKDLQHYMSGNTQRVAKLICQKADFEIIQKLIASPNIEKEGQDWDRRVQTMRGDFLEDFVVGARRYLNKKHPTHGPFGGRNR--DRFFLKVEQGLKVAMSKYRSVDVGNTLFGKVKLDP--CCIACDRPF 2931
R+E+ GL+ ++L + L +R W A+ +L + E+ FA +S + + + Q R +L K+ ++ ++ R+AK I KAD++II+ + S + + Q D ++ R +L F+ G +R + G G +F K+EQ +++A+SK+ + G +LFGK+ L+ C+AC+R F
Sbjct: 94 RLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDTLTDNQ-CDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQF 297 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig18.136.1 >prot_P-littoralis_Contig18.136.1 ID=prot_P-littoralis_Contig18.136.1|Name=mRNA_P-littoralis_Contig18.136.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1171bp MDGSESSPACTFQSARLLPEIRIDTSRLDVLLSGFQRRLTTLETSFARVAback to top mRNA from alignment at P-littoralis_Contig18:635110..650862- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig18.136.1 ID=mRNA_P-littoralis_Contig18.136.1|Name=mRNA_P-littoralis_Contig18.136.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=15753bp|location=Sequence derived from alignment at P-littoralis_Contig18:635110..650862- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig18:635110..650862- >mRNA_P-littoralis_Contig18.136.1 ID=mRNA_P-littoralis_Contig18.136.1|Name=mRNA_P-littoralis_Contig18.136.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3513bp|location=Sequence derived from alignment at P-littoralis_Contig18:635110..650862- (Pylaiella littoralis U1_48)back to top |