mRNA_P-littoralis_Contig18.101.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig18.101.2
Unique NamemRNA_P-littoralis_Contig18.101.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: D8LRR1_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR1_ECTSI)

HSP 1 Score: 491 bits (1263), Expect = 7.140e-167
Identity = 239/252 (94.84%), Postives = 245/252 (97.22%), Query Frame = 3 
Query:   84 MLCHSAAGPARGAGHAAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            MLCHSAAGPARGAGHA AAMDGTRQHT+QPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVG+CTL+GASGEYSDFQHIME LED HQYDVNMDDGFERSP+EIYN+LRT+MYNRRNKFNPLWNYLLIAGCKKDGT FLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAK T EGTVVSDAY VDTEWSLASFSQPKAGQDTDGSW
Sbjct:    1 MLCHSAAGPARGAGHATAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 252
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BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A835Z5Q8_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q8_9STRA)

HSP 1 Score: 370 bits (949), Expect = 1.910e-119
Identity = 180/234 (76.92%), Postives = 204/234 (87.18%), Query Frame = 3 
Query:  141 MDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCK-KDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            MD  RQ T  PIVTGTSV+G+KYKDGVMLAADTLASYGSLARYK+VER++PVG+ TL+GASGEYSDFQ IME LED  Q D NMDDGF+R+P+E+++ LR +MYNRRNK NPLWNYLLIAG   + G  FLGSVDHIGT YED+ILATGFG HLALPILR++WR D+EEGEARALLEDCMRVLFYRDCRALNRIQIAK T EG +VSD YT++T WSLA+F+QPKAG DTDGSW
Sbjct:   38 MDAPRQRTQSPIVTGTSVIGLKYKDGVMLAADTLASYGSLARYKSVERIRPVGESTLLGASGEYSDFQAIMEMLEDQTQEDRNMDDGFKRAPAEVHSYLRAVMYNRRNKMNPLWNYLLIAGVNPRTGGFFLGSVDHIGTAYEDDILATGFGAHLALPILRRRWRADMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATREGVLVSDPYTIETSWSLAAFAQPKAGADTDGSW 271
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BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A7S2RSS8_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSS8_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.520e-99
Identity = 154/228 (67.54%), Postives = 186/228 (81.58%), Query Frame = 3 
Query:  156 QHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            QHTT+PIVTGTSV+GIKYKDGVMLAADTLASYG+LA +K+VER+  V    L+GA GEYSDFQ I + L+     D NMDDG + SPSEI++ LR +MY RRNK NPLWN++L+AG K +G +FLGSVD IGT +ED+ LATGFG +LA+PILRKKWRPDL+EGEARALLE+C+RVLFYRDCRALN+I++AK T EG+V+SD YT++T WS ASF   K G D DG W
Sbjct:   44 QHTTRPIVTGTSVIGIKYKDGVMLAADTLASYGTLAMFKDVERIHKVSDSCLIGAGGEYSDFQKIQQVLDRLTSEDRNMDDGHQTSPSEIFHYLRAVMYQRRNKMNPLWNHVLVAGFK-EGKSFLGSVDLIGTAFEDDFLATGFGSYLAIPILRKKWRPDLDEGEARALLEECLRVLFYRDCRALNKIRLAKATAEGSVISDPYTLETSWSAASFQTVKGGLDADGGW 270
[Close]
BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: F0Y8W5_AURAN (Proteasome subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W5_AURAN)

HSP 1 Score: 311 bits (796), Expect = 5.140e-97
Identity = 150/229 (65.50%), Postives = 184/229 (80.35%), Query Frame = 3 
Query:  153 RQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            RQHT++PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V+R+   G  TLVGASGE SD+  I+ +LE   + ++N +DGFE SP EIY+ LR +MY  RNKFNPLWN L++ G K DG  FLGSVD  GT YED+++ATGFG HLALPI+R KW  D++EGEARALLEDC+RVLFYRDCRAL+ + ++K T +GT+VSD Y ++T+WS ASF  PKAG+D DG W
Sbjct:   24 RQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVQRISKTGSYTLVGASGEMSDYHAILRKLEGLERDNLNANDGFEHSPVEIYSYLRAVMYQARNKFNPLWNSLVVGGYK-DGKAFLGSVDLRGTAYEDDVIATGFGAHLALPIMRAKWHADIDEGEARALLEDCLRVLFYRDCRALDMVVLSKATADGTLVSDPYKIETDWSSASFVVPKAGEDGDGGW 251
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BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A7S3ZJK1_9STRA (Proteasome subunit beta n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJK1_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.240e-95
Identity = 151/237 (63.71%), Postives = 186/237 (78.48%), Query Frame = 3 
Query:  129 AAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            A AA    RQHT++PIVTGTSVLGIKYKDGVMLAADTLASYGSLA +K+V R+   G  TLVGASGE SD+  ++++L+   Q + N DDGFE  P+EIY+ LR ++Y RRNKF+PLWN L++ G K DG  FLGSVD  GT YED+++ATG+G HLALPI+R KW PDL+EGEARALLEDC+RVLFYRDCRAL+ + ++K T  GT+VSD Y ++T+W+ ASF  PKAG D DG W
Sbjct:   37 ATAAEAPARQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVTRIARTGSYTLVGASGELSDYHALLDKLKGLAQANANCDDGFEHGPAEIYSYLRAVLYQRRNKFDPLWNSLVVGGFK-DGAPFLGSVDLRGTAYEDDVIATGYGSHLALPIMRAKWTPDLDEGEARALLEDCLRVLFYRDCRALDTVVLSKATATGTLVSDPYKLETDWTSASFVAPKAGGDGDGGW 272
[Close]
BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A6S8AP70_9STRA (Proteasome subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8AP70_9STRA)

HSP 1 Score: 298 bits (762), Expect = 6.560e-92
Identity = 144/227 (63.44%), Postives = 176/227 (77.53%), Query Frame = 3 
Query:  159 HTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            HT +PIVTGTSVLG+KYKDG+M+AADTLASYGSLA +K V R+ P G  TLVG SGE SDF HI+  LE+  + ++N DDGFE  P+EIY  LRT+MYNRR+K NPLWN L++ G  KDG +FLG VD  GT Y D+++ATG+G HLA+P++R KWRP LEEGEAR LLEDC+RVLFYRDCRAL+ I ++K T +GT+VS  Y + T+WS ASF  PKA  D DG W
Sbjct:   32 HTQRPIVTGTSVLGLKYKDGIMMAADTLASYGSLAMFKEVTRIAPAGTNTLVGGSGEMSDFHHILRLLEELGRENLNADDGFEHPPAEIYRYLRTVMYNRRSKLNPLWNQLVVGG-HKDGESFLGVVDLRGTAYTDDVVATGYGAHLAMPVMRNKWRPGLEEGEARNLLEDCLRVLFYRDCRALDTIILSKATDQGTLVSPPYKLTTDWSSASFVVPKADDDGDGGW 257
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BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A7S3HPE8_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPE8_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.730e-91
Identity = 144/225 (64.00%), Postives = 180/225 (80.00%), Query Frame = 3 
Query:  126 HAAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASF 800
            HAA +      HTTQPIVTGT+V+GIKY  GVMLAADTLASYGSLARYK+V RLK VG+ TL+GASGE SDFQ IME L+  +Q D+N DDG++RSPSE +N LR ++Y +R K NPLWN LL+AG  K+   FLG VD IGT YE+N +ATGFG +LA+P++R+KW  +++EGEAR+LLEDC+RV+FYRDCRALNRIQIAK + +GT+VS+ Y + TEW  A+F
Sbjct:   11 HAALSPHAPTTHTTQPIVTGTTVIGIKYNGGVMLAADTLASYGSLARYKDVRRLKQVGENTLIGASGEISDFQTIMEMLDSMNQSDINEDDGYKRSPSEYFNYLRAILYQKRGKGNPLWNQLLVAGFHKEAP-FLGYVDLIGTAYEENFIATGFGAYLAIPLIREKWYAEMDEGEARSLLEDCLRVMFYRDCRALNRIQIAKASADGTLVSEPYEISTEWETANF 234
[Close]
BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A812X8W8_9DINO (Proteasome subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X8W8_9DINO)

HSP 1 Score: 288 bits (738), Expect = 1.650e-88
Identity = 131/228 (57.46%), Postives = 179/228 (78.51%), Query Frame = 3 
Query:  156 QHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            +HTTQPIVTGTSV+ IKYKDGVM+AADTL SYG LAR+ ++ RLK VGK TL+G SGEYSDFQ+I+  L++  + D N++DG E +  E++N L  +MYNRRNK NPLWN +++AG + DG   LG+VDHIGT Y ++ + TGFGGH+A+P++R+ W+PD+ E +ARAL+E+CM++L+YRDCR +N+I +AK T EG +VS+ +T+ T+W   SF + KAG DT GSW
Sbjct:   22 KHTTQPIVTGTSVIAIKYKDGVMMAADTLGSYGGLARFTDLRRLKVVGKSTLIGCSGEYSDFQYILSLLDELVEEDANVEDGRELTAEEVHNYLTRVMYNRRNKGNPLWNSIVVAGVE-DGVATLGTVDHIGTAYTEDFIVTGFGGHMAIPLIRESWKPDMSESDARALVEECMKILYYRDCRTINKITLAKITAEGGMVSEPFTLATKWDFQSFIKAKAGADTGGSW 248
[Close]
BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A7S0SUY2_9STRA (Proteasome subunit beta n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUY2_9STRA)

HSP 1 Score: 276 bits (707), Expect = 6.060e-84
Identity = 133/225 (59.11%), Postives = 168/225 (74.67%), Query Frame = 3 
Query:  162 TTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGS 836
            TTQPIVTG+SVLGIKYKDGVMLAADTLASYGSLARYKN++R++ V   TL+GASGE SDFQ I E L    Q D+N DDG+ +SP EI+N LR ++Y RR K NPLWN LLIAG +K    FLG VD IGT Y++N +ATG+G +LA+P++R++W  DL E EA+ LLE+C+RVLFYRDC+A NRI I+K T++G  +S+ Y +   W  A+F        +DGS
Sbjct:   23 TTQPIVTGSSVLGIKYKDGVMLAADTLASYGSLARYKNIKRIEKVNNSTLIGASGEISDFQSISEMLSSIEQDDINQDDGYTKSPIEIFNYLRAVLYQRRGKGNPLWNQLLIAGYRKGQEPFLGYVDLIGTSYQENFIATGYGAYLAIPLIRERWHKDLSEDEAKKLLEECLRVLFYRDCKASNRIIISKATIDGVSISEPYEITHNWETATFDARHPTSGSDGS 247
[Close]
BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Match: A0A7S2S9Q9_9STRA (Proteasome subunit beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9Q9_9STRA)

HSP 1 Score: 276 bits (707), Expect = 7.660e-84
Identity = 146/252 (57.94%), Postives = 174/252 (69.05%), Query Frame = 3 
Query:  111 ARGAGHAAAAMDGTRQHTTQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVGASGEYSDFQHIME-----QLED----DHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNKFNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAYTVDTEWSLASFSQPKAGQDTDGSW 839
            A G  +  AA       TT+PIVTGTSVLGIKY  GVMLAADTL SYG +A+YK+  RL  V   TL+G  GEYSDF  + E      LED    D  YD +   G  R   E++N LR +MYNRRNK NPLWN LL+AG   +G  FLG VD IGT YEDNI+ATGFG +LA+P++R+K+RPD+EEGEARALLEDCMRVLFYRDCRALNRIQIAK T +  ++SD Y ++T W  A + +PK   D DG W
Sbjct:    8 AGGVSNVRAASLSATDRTTRPIVTGTSVLGIKYAGGVMLAADTLCSYGGMAKYKDARRLVDVNGKTLIGGGGEYSDFTAVCELLKRNALEDKCTSDSLYDEDNTHGCAR---EVWNYLRAVMYNRRNKMNPLWNELLVAGYSSEGQPFLGYVDKIGTTYEDNIVATGFGSYLAMPLMREKYRPDMEEGEARALLEDCMRVLFYRDCRALNRIQIAKATPDEVLISDPYELETNWDSAEYMKPKGQLDGDGGW 256
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.101.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRR1_ECTSI7.140e-16794.84Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A835Z5Q8_9STRA1.910e-11976.92Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RSS8_9STRA1.520e-9967.54Proteasome subunit beta n=1 Tax=Rhizochromulina ma... [more]
F0Y8W5_AURAN5.140e-9765.50Proteasome subunit beta n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZJK1_9STRA2.240e-9563.71Proteasome subunit beta n=3 Tax=Pelagomonas calceo... [more]
A0A6S8AP70_9STRA6.560e-9263.44Proteasome subunit beta n=1 Tax=Aureoumbra lagunen... [more]
A0A7S3HPE8_9STRA2.730e-9164.00Proteasome subunit beta n=1 Tax=Spumella elongata ... [more]
A0A812X8W8_9DINO1.650e-8857.46Proteasome subunit beta n=1 Tax=Symbiodinium sp. K... [more]
A0A7S0SUY2_9STRA6.060e-8459.11Proteasome subunit beta n=1 Tax=Chromulina nebulos... [more]
A0A7S2S9Q9_9STRA7.660e-8457.94Proteasome subunit beta n=1 Tax=Eucampia antarctic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:482002..487764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRR1
Preferred namePSMB4
PFAMsProteasome
Model size2377
Max annot lvl2759|Eukaryota
KEGG koko:K02736,ko:K05542,ko:K18740
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categorysignal peptide
GOsGO:0000226,GO:0000502,GO:0001530,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005840,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007098,GO:0007346,GO:0008150,GO:0008152,GO:0008233,GO:0008289,GO:0009056,GO:0009057,GO:0009628,GO:0009651,GO:0009896,GO:0009987,GO:0010035,GO:0010038,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016043,GO:0016579,GO:0016787,GO:0019538,GO:0019774,GO:0019941,GO:0022402,GO:0022607,GO:0022626,GO:0030071,GO:0030163,GO:0031023,GO:0031331,GO:0031347,GO:0031348,GO:0031597,GO:0031974,GO:0031981,GO:0031984,GO:0032101,GO:0032102,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034622,GO:0036211,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043248,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046686,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065003,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080134,GO:0090068,GO:0097367,GO:0098827,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2001252
Exons9
Evalue1.42e-175
EggNOG OGsKOG0185@1|root,KOG0185@2759|Eukaryota
Ec32 ortholog description20S proteasome beta subunit
Ec32 orthologEc-08_002100.1
EC1.3.1.88,3.4.25.1
Descriptionthreonine-type endopeptidase activity
Cds size825
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03016,ko03019,ko03051
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.101.2prot_P-littoralis_Contig18.101.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig18 484163..487747 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789864.4357111-UTR-P-littoralis_Contig18:482001..4820821680789864.4357111-UTR-P-littoralis_Contig18:482001..482082Pylaiella littoralis U1_48UTRP-littoralis_Contig18 482002..482082 -
1680789864.4463603-UTR-P-littoralis_Contig18:482444..4826151680789864.4463603-UTR-P-littoralis_Contig18:482444..482615Pylaiella littoralis U1_48UTRP-littoralis_Contig18 482445..482615 -
1680789864.455117-UTR-P-littoralis_Contig18:482879..4841621680789864.455117-UTR-P-littoralis_Contig18:482879..484162Pylaiella littoralis U1_48UTRP-littoralis_Contig18 482880..484162 -
1680789864.5469139-UTR-P-littoralis_Contig18:487747..4877641680789864.5469139-UTR-P-littoralis_Contig18:487747..487764Pylaiella littoralis U1_48UTRP-littoralis_Contig18 487748..487764 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789864.4684346-CDS-P-littoralis_Contig18:484162..4842341680789864.4684346-CDS-P-littoralis_Contig18:484162..484234Pylaiella littoralis U1_48CDSP-littoralis_Contig18 484163..484234 -
1680789864.4820669-CDS-P-littoralis_Contig18:484728..4848431680789864.4820669-CDS-P-littoralis_Contig18:484728..484843Pylaiella littoralis U1_48CDSP-littoralis_Contig18 484729..484843 -
1680789864.4925199-CDS-P-littoralis_Contig18:485261..4853661680789864.4925199-CDS-P-littoralis_Contig18:485261..485366Pylaiella littoralis U1_48CDSP-littoralis_Contig18 485262..485366 -
1680789864.5046291-CDS-P-littoralis_Contig18:485947..4860371680789864.5046291-CDS-P-littoralis_Contig18:485947..486037Pylaiella littoralis U1_48CDSP-littoralis_Contig18 485948..486037 -
1680789864.5150723-CDS-P-littoralis_Contig18:486302..4864701680789864.5150723-CDS-P-littoralis_Contig18:486302..486470Pylaiella littoralis U1_48CDSP-littoralis_Contig18 486303..486470 -
1680789864.525955-CDS-P-littoralis_Contig18:486923..4870041680789864.525955-CDS-P-littoralis_Contig18:486923..487004Pylaiella littoralis U1_48CDSP-littoralis_Contig18 486924..487004 -
1680789864.5366137-CDS-P-littoralis_Contig18:487553..4877471680789864.5366137-CDS-P-littoralis_Contig18:487553..487747Pylaiella littoralis U1_48CDSP-littoralis_Contig18 487554..487747 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig18.101.2

>prot_P-littoralis_Contig18.101.2 ID=prot_P-littoralis_Contig18.101.2|Name=mRNA_P-littoralis_Contig18.101.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=275bp
MLTRVLCSVGLFLLSPVVSSSSMLCHSAAGPARGAGHAAAAMDGTRQHTT
QPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGKCTLVG
ASGEYSDFQHIMEQLEDDHQYDVNMDDGFERSPSEIYNMLRTMMYNRRNK
FNPLWNYLLIAGCKKDGTTFLGSVDHIGTCYEDNILATGFGGHLALPILR
KKWRPDLEEGEARALLEDCMRVLFYRDCRALNRIQIAKTTVEGTVVSDAY
TVDTEWSLASFSQPKAGQDTDGSW*
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mRNA from alignment at P-littoralis_Contig18:482002..487764-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig18.101.2 ID=mRNA_P-littoralis_Contig18.101.2|Name=mRNA_P-littoralis_Contig18.101.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5763bp|location=Sequence derived from alignment at P-littoralis_Contig18:482002..487764- (Pylaiella littoralis U1_48)
AGCGTAGAAGCCATTGCATGCTCACACGAGTGCTGTGTTCTGTAGGTCTC
TTCCTGCTCTCACCTGTTGTTTCATCGTCGAGTATGCTCTGTCATTCCGC
TGCTGGTCCCGCTCGAGGAGCGGGGCATGCCGCAGCTGCGATGGACGGAA
CACGGCAGCACACCACCCAGCCGATTGTCACGGGGACTTCGGTTCTGGGT
ATCAAGTACAAGTGAGACTTTGCATGTCAGTTTGGATTTTAACGAAGGCG
GCAGTACTTGCATAATATTGGGTTTGACCCTTACGGATTGCGGGGTGTAC
GATACACGAAGTACGAGGTACGATAGAGGAGCTCGCCGAGAAATTTTCGG
GCAGGTTGTTTTTATTCTCGTGCTCGTTGCAGTCGTAAGAATCTTCGACA
ACGCTGATTATTTTCTTGTTTTGATTTTGGACATAGGAGGCGCACGAAAG
ACAGCAAAAGCTCACCCTCCTGTTGATTTGAAAGCGCTGTACGCATCTTG
TTTTCGTGCACACCGGCGAGTATCATCGCCGGGCCAGGACCTCCACAAAC
GCATCGCATTGAACGGTATGATAGTAGATACTAATAATCGAATGATCAAG
GGCGTCAGAGTGAATCCTCGTGCTTCATTTTGTGCAACCGTGCTGATATT
TTCTGTGCCAAGCATCGACGCATGGCAAGAGGAAACGATGGTAAAAGTCA
AACCCCAGGGAAGAACTTTGGTTTGATGCAATCATGGTGTTCGTTGTTGG
CGCCGGGCAGGGATGGAGTGATGCTGGCAGCGGACACCTTGGCGTCGTAT
GGAAGCTTGGCCCGCTACAAGAATGTCGAGCGCCTGAAGCCGTGAGTATT
AACGAAACACTGCCCTTTACATGTTTCCGCCTGGTCGCAGGTGTTGTCTC
CGCTGCCCTTGTCCTCCCAGCGCCGCGTGCAGTGCCTTAACCGTTCTCTC
GTCTTCATCGAACAGATGCGTAGCTATGTACTCCAAGTGGGCGCTTTCCC
CCAGTCCCGTACCATTCACGTCTGATGCGGTGCATTCGTTTTTCGAGAGA
CACCCATACTGCTTGGCGGAACCCATGGTCGTTGATGAACCCCCCAAGGT
TCGCTGTACGCCAGCGCGCGTAGTATCACGCTCGGAGTCCCATGCCAGTG
CGCAACACGTTGTGCCACATTCCAGATCTGCCGCACGTGCTGATGTGATA
GTGCTTTGGAATTACTTGATTTTGCTGAATCATCTGCCGCTTCTTTACGC
CCACAATGCTGTCCGTGTGCCATCCTGTGCTGTGGGTGATGCAGGGTGGG
GAAATGCACGCTGGTTGGGGCGTCGGGTGAGTACTCGGACTTCCAGCACA
TCATGGAGCAGCTCGAAGACGACCACCAGTACGACGTGAACATGGACGAC
GGCTTCGAGAGGAGCCCGTCTGAGATCTACAATATGCTAAGAACAATGAT
GTACAATCGCCGGTGAGATATATTTACATCTTATATTAGAGATGGGTGGC
CACATATTTTGATGCGGCCAAGACAAACGCTGCGCAACCTCAAATAGCGC
TTGCGGTGGGTTTGCTTTGTCAACACGAACTTTTTAAAGGTAGCATCTGA
CGCCCTCGATGTACGCTCTTGTGTTACGTGCGCCTGACTGTTGGTGTGTC
TTTTGTTTTTCTCATGCAATCTTGCTCGTCATCCAACACCCGTCATGTTT
CGCTTTGCTGTATATCGTGGCGAACAGAAACAAGTTCAACCCGTTGTGGA
ATTACCTGCTCATCGCTGGTTGCAAGAAGGACGGTACCACTTTCCTCGGT
TCCGTTGACCACATCGGGTGAGCATATTATGTTTTTTTTAGCAGGGCGAA
GGATTGAATAATGCACCAGGGGAATGTAGTCGGAGAGAGCTTTAAATCTC
TCTCCGCTGCTGTGCCGCACCCGTATGATACCTCACACACGTTTTGAACC
AGACGATCGGACAGATGAGATTGAGTGTATGATGTAATGGGCAGCCGAAA
CTCCAGGGATAAGCTCGCAGCAGCTGAAGTCGAGGCCGTTGTGCTGATGA
TACGAATGTTGGTACAAGATGAGAGAGGAGAAGCAGGGACCCTTTTGGGC
AAGTTTACCCGTTAGCCCCGCAGACGTCGAGCCCACCATCGCCTGCCGCA
GGGGACCATAGCTTCGGAAATGACATAATGAGCTCACATATCCCTGTGGC
TGCATGGAGATACAAAGTTTCCGCACCGTGACCCTTGGTCAGATTTTGGC
AATCGATCATCGGGAGACTTGTCGGTCTCAATACGCCACATTTTGTTTTT
TGTAGTTGAGAGTCCAAAGTTCGTTTCAGAGCTGGGAATTGCAGCGCTGA
TTAAACCCTGTCCGTGCTCGCCCCGCGTTTGCCGATCTCTAATATCAGGA
CGTGCTACGAGGACAACATCCTCGCCACGGGATTCGGCGGACACTTGGCG
CTACCTATCCTTCGCAAGAAGTGGAGGCCTGACCTAGAAGAGGGAGAGGC
TAGGTGATGCTTACACACAAGAAACAGTTTTTTCAAGCTTACATTGACGG
CGTGCGGTGTCTGTCGTCTGGAGTGGCGTACCTTCTTTCTCCGACAACGA
CTAGCTCCAGTGTAAAATTATTACGATAGCAGTTAGGTTGGGCAGGCACG
TGTATTGCTAATCATTTTGTCCGTGAAGGAAAATCGATCATATGTGCTTG
TTTCAAATCGTTGTACAACGTTGGATTTTATGGCTTCGGTGCCCCGTTGC
TTTTCTGAAAAAAAATGGCAAATATTTCGTTGGCTACGAGCTTTTTGAAG
CAGCGACAAGCGAAGCATCTCTGAGGGATCACCCGCCAGGCGTGACAGCA
TGATCGATACACCCATGAACTTGATTGGTTTTCCTCGTCCGTCCTTTTCA
TGAATATGTGGTTGCCCACAGGGCTTTGCTAGAGGATTGCATGCGCGTGC
TCTTCTACCGCGATTGCCGCGCGCTGAATCGTATCCAGATCGCGAAGACT
ACCGTGGAGGGCACGGTCGTCAGCGATGCTTACACGGTAAGAACCGTTAA
CGCGCTCGCATTTTTGTAGGAGGTATTTTAGGGCTTGTTCGTTTGCAGGT
AGAGAAACGTGAAGCACCCCAATATGGCTTGCGTGGCGTGGTCACCTGCT
GGAATGCACGCCAATAATTAACGGGTTCGTTGACGCGTTGTTCGTGGAAC
GTGTGTTTGTAGCGACGTGTTGGTAGCGGTATATTTTTTGAACCGAAGAT
CACAACGCCAGGCCGATTCTATTCGCACGTCGGAATGGGGGCTTGCTCGA
CTGTTGCAGCTGGAAAATGCTCAAATCTTGTCTGTTGGCCCAACAATAAG
GCACTCTTTTGGCGTGTGTAAGCAGCTCACCAACATTTGTCGACGCTGAT
CGTCGCAAACCGAACTTGCACGGTTCCCGCGTTGTAGCACTGACGTTTCC
TGAGTTAATCTCGTATCTCTCTTTACACCTTGGCTGGACGCCTCTGACAT
GTAATCAATGTGCCTGTCGGTGTCCTGCAGGTGGACACAGAGTGGAGCTT
GGCCTCGTTTAGTCAGCCAAAGGCGGGGCAGGACACTGATGGAAGCTGGT
GAAAACGCCTAGTACTTCGTATATTTCTAGTCGGAGTTTCAACATCGGAG
GGGGGGCGGGTTGGGGTTTGGCGAAATTGCGCAGGACTGCTGTGGTGTTG
ACGATCGGCATCTGCAGACTGGTGTCGAAATTTTTCCATCCTCCAACCCA
TCCATAAGGTCCTCGAGCACGGGAGGATGTCGAGTCGTATTACTGTTGTC
ATAGTTGGGAGGTTACATCGGGCGCGGCGATGGTAGTTTCGCGACTTTAT
GGCATCTTGCTAATACTTCGCATTTCGCAGTCAAACGCGCACATTATTTG
CCTCGACAGGAAGACATTGCTTTGGTGCGCAGGCGGAGGAATCAGGGCGC
GTGGCCAATATCGTATTGTGAAACATGATCCTCTACTGCTGTAGTGCAAG
TCAAAGCGTGCGGCCTGGTCGCTCCAGTTGTAAGTATCGTGGCGGGTTTT
CACACTCATGGACGTACTACTGTACAGCGGTTCTTCCAAAAGCGTCGTAA
ATGATCGCAACAGGCCGGTTTCACAAAATGTCGCACACGATCGAGGGAAC
AACACGTGGCCTCGTAGTGAGTACGTGAAAAGACCACAGCAGCCGCTATA
GGTCGATCTCGAATATTTCTTCGCGCAACGGAGCTTCGTTGTTTCATACA
TGGCATATGGGATGACAACCAACATGGCGCCTGGCTTCGGCGGTATACAA
CGACGGAATGACAATTTAACTTTTCAGGGTCAACTTTTCGCAGCTAACGA
GCATATTTGGCGCATGTACAGCCGCGAAACTTGAATAACCATCTCAAGCG
TCCCCGACTAGAACTTTCAACAGGCTGATGCGCTTTCGTGTACTGCTATG
GAGTCGCGAAGCTTCAGATGTACACCGGTCGCCCCGGTGGATTAGTGGTC
CCCTCGTTAACCACTAGATGCAGAGGAACGGGGGTTCAATTCCCGGTGAA
TGTGTTCCTTTGCTACTTTGAAAGCGGCTATGCTGTTCGTAAAAGCAGAT
TCGGCTTCGCCGACGAGGGTAGGGACCGCGGATCCCTGCTCGCGAGAAAA
AATCTCACGCATGTACCGCAAAAGGAAGGTGGGGGTAACTCCTCCTGTGT
GACCCCGTCGATGGGCCTAGCCTGTAGTTTGAACCGCAAGGTGCAGACTA
GTGTGCCAGAGAATATGGGATGACAACACAGATGTTCTTGGTTCACTTGG
CGGAGATGGTCTTCCCAGATGCGGAGCGATATATTCGATCATTCACTGCA
GCCGCCAAGTCGCCGCTGCTTGTGCTCGGAAGGCCTGTTCAAAGTCGCAG
AAAAAAGGACATGTCACCAGCGGCAGCCTCGTTTGTGTCGAGGGTTACGC
ATTATTAGTTGTGTAATAAGACAAAATAAAAAATGCAACAGAGAGAGGCG
TTCCCGTCTGCAAAACTGACGCCCGTCCGCAGACCGTTTCAGGTGCTAAC
AAGATGCGTTGGCGAGCAGCCAAGGATTCCGTTCCCGCTACACCACTAGC
GACCATCAACACATGTGCCTACAAATTACTTCCCTCAATAGCACGCACCC
GCGATGAGGAGTCGCTGCGCCGACGGCTGTGTTTCTGCCCATCTGAGCGC
GCGAAACAGCCCTTCCGCGGCCTCGTCCGCATTCCCTTCGACAGACAGAT
CGGAGTACGCCAAAGCAGACGCTTGCAGTCCAATCAGCTGCCCGGCGAAG
TCAACGACAACGCTTGTCCTGCGTGCATCCCGCCCACACAGAGCGACGGG
GGGAGCGGAGATCGACGACGAGAGCTCTCAAGCACAGATGACATATCGCG
AACGCAAGCGGTCACCGATGAGCAGTGCAAAAGAGGCCACACCGAGGTGT
GCAGCAAAGCCGCCGGGGCGCGTAGCAAACCAGGGACATCGCAACAAACC
AGTAGGTACCCTTGATTATCCATCACTGTGCGGGAACAAACACTGCAGAA
ACCATACCGCCGCCGCCATAAATACAATAGCGGTGATGCGAGTTATCACT
TTCATGAGGCGATTGCCATAAAAAGTACTCGCCAGCAGATTTCCAGCCGA
TACTCGGCAATACTGCAGTGGATAACCCACCTCGCCATGTCCACGAGATC
GGCAAGCTCCCCAACTCCATCGATGCGGCCGCTAGTGCTGCTCGATGTTG
CCCCCAACACCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig18:482002..487764-

>mRNA_P-littoralis_Contig18.101.2 ID=mRNA_P-littoralis_Contig18.101.2|Name=mRNA_P-littoralis_Contig18.101.2|organism=Pylaiella littoralis U1_48|type=CDS|length=825bp|location=Sequence derived from alignment at P-littoralis_Contig18:482002..487764- (Pylaiella littoralis U1_48)
ATGCTCACACGAGTGCTGTGTTCTGTAGGTCTCTTCCTGCTCTCACCTGT
TGTTTCATCGTCGAGTATGCTCTGTCATTCCGCTGCTGGTCCCGCTCGAG
GAGCGGGGCATGCCGCAGCTGCGATGGACGGAACACGGCAGCACACCACC
CAGCCGATTGTCACGGGGACTTCGGTTCTGGGTATCAAGTACAAGGATGG
AGTGATGCTGGCAGCGGACACCTTGGCGTCGTATGGAAGCTTGGCCCGCT
ACAAGAATGTCGAGCGCCTGAAGCCGGTGGGGAAATGCACGCTGGTTGGG
GCGTCGGGTGAGTACTCGGACTTCCAGCACATCATGGAGCAGCTCGAAGA
CGACCACCAGTACGACGTGAACATGGACGACGGCTTCGAGAGGAGCCCGT
CTGAGATCTACAATATGCTAAGAACAATGATGTACAATCGCCGAAACAAG
TTCAACCCGTTGTGGAATTACCTGCTCATCGCTGGTTGCAAGAAGGACGG
TACCACTTTCCTCGGTTCCGTTGACCACATCGGGACGTGCTACGAGGACA
ACATCCTCGCCACGGGATTCGGCGGACACTTGGCGCTACCTATCCTTCGC
AAGAAGTGGAGGCCTGACCTAGAAGAGGGAGAGGCTAGGGCTTTGCTAGA
GGATTGCATGCGCGTGCTCTTCTACCGCGATTGCCGCGCGCTGAATCGTA
TCCAGATCGCGAAGACTACCGTGGAGGGCACGGTCGTCAGCGATGCTTAC
ACGGTGGACACAGAGTGGAGCTTGGCCTCGTTTAGTCAGCCAAAGGCGGG
GCAGGACACTGATGGAAGCTGGTGA
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