mRNA_P-littoralis_Contig179.61.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig179.61.1
Unique NamemRNA_P-littoralis_Contig179.61.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 4.830e-165
Identity = 248/397 (62.47%), Postives = 290/397 (73.05%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDDKPALKRSPGVRYLEHGKN--------QFKEQIEDVLDAAECLEPDVQPTVEIDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA 1167
            W+R+FR +GGFKRD+RG HERDWIMSEEDL   L+ WM+++KRL+ KDV                         LP+SM TTH WM+ LGC Y+RATKS+YTD HE   V   R +YID KR+ ALRQ  WVRV++D+LTP EL+RL+ +KG   D  F +EV  CV+ G ECIEFHVD LRDNGSV+ FD LRA LGPEGG  SVR++ AAA PCE+ H   KCKCNRKVRHIGQDES+Y AYAREGKEWV+QGV G+RKK E PG MVSAFQDER+GFGLPL  DVL  VNA+R    K  L RSPG+R+L++GKN        +FKEQ+ED LD  +  EPD+Q  VEIDHSSGHT+QR DGLHV NMNVKYGGKQKVLRDTV+TE CLGP EA
Sbjct:  405 WLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTAKDVN------------------------LPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAKD--FCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQMEDALDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEA 775          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE)

HSP 1 Score: 485 bits (1248), Expect = 2.020e-160
Identity = 247/433 (57.04%), Postives = 303/433 (69.98%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDD--KPALKRSPGVRYLEHGK--------NQFKEQIEDVLDAAECLEPDVQPTVEIDHSSG----------------------------------HTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA 1167
            W+R+FR  GGF+RDARG+HE DWIMSEEDL   L+AWM S+ R ++KDV  YIN  L  +D +DL RL +YQV LP+SM TTH WM+RLGC Y+RATKS+YTDTHE  +V + R  YI+++R+ ALRQ  WVRV++ +L   E++RL+ +K    + DFY+EV  C I G +CIEFHVD LRD+GSV++FD LRA LGPEGG  SVR+D AAAA CEY HP +KC+C +KV HIGQDES Y AYAREGKEWVI+GV G+RK+ E PG MVS FQDER+GFGLP+    LA VNAKR  +   K  L RSPG+R+LE+GK        +QF+EQ+EDV+D  E ++PD Q   E+DHSSG                                  H KQR DGLHVSNMNVKYGGKQKVLRD+V+TE CLGP EA
Sbjct:  322 WLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVRFDQAAAAQCEYFHPTNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKRTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGCWGYDQFEEQVEDVMDVLEHIDPDKQIVFEVDHSSGPDAKPWTPVXXXXXXXXXXXXXXXXXXXXXXXXXHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGPEEA 754          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE)

HSP 1 Score: 433 bits (1114), Expect = 1.680e-144
Identity = 226/423 (53.43%), Postives = 282/423 (66.67%), Query Frame = 1
Query:   79 EEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVL--------------------------------------------------GPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDD--KPALKRSPGVRYLEHGK--------NQFKEQIEDVLDAAECLEPDVQPTVEIDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA 1167
            +EDL   L+AWM S  R++++DV  YIN  L  +D +DL RL +YQV LP+SM TTH WM+RLGC Y+RATKS+YTDTHE  +V + R  YI+++R+ ALRQ  WVRV++ +L   E++RL+ +K    + DFY+EV  C I G +CIEFHVD LRD+GSV++FD LRA L                                                  GPEGG  SVR+D AAAA CE+ HP +KC+C +KV HIGQDES Y AYAREGKEWVI+GV G+RKK E PG MVS FQDER+GFGLP+    LA VNAKR  +   K  L RSPG+R+LE+GK        +QF+EQ+EDV+D  E ++PD+Q   E+DHSSGH KQR DGLHVSNMNVKYGGKQKVLRD+V+TE+CLGP EA
Sbjct:   13 QEDLKSELLAWMISPPRVTIEDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCKYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALDAARTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKPLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEA 435          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 5.670e-139
Identity = 228/415 (54.94%), Postives = 274/415 (66.02%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQG-------------------VSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDDKPALKRSPGVRYLEHGKN--------QFKEQIEDVLDAAECLEPDVQPTVEIDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGE 1164
            W+R+FR +GGFKRD+RG HERDWIMSEED    L+ WM+++KRL+VKDV++YIN+ LF   + DL RLLSYQV LP+SM TTH WM+ LGC Y+RATKS+YTD HE   V   R +YID KR+ AL Q  WVRV++D+LTP+EL+RL+ +KG    +DF +EV  CV+ G ECIEFHVD LRDNGSV+ FD LRA LGPEGG  SVR++ AAA PCE+ H   KCKCNRKVRHIGQDES+Y AYAREGKEWV+QG                   V G+RKK E PG MVSAFQDER+GFGLPL  DVL  VNA+R    K  L RSPG+R+L++GKN        +FKEQI          EPD+Q  V                               LRDTV+T+ CLGP E
Sbjct:  391 WLRDFRGHGGFKRDSRGVHERDWIMSEEDPKDELIKWMRTQKRLTVKDVQNYINQWLFANQIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQPLWVRVQRDTLTPKELQRLDGIKGPA--EDFCAEVYDCVVEGRECIEFHVDLLRDNGSVDRFDDLRAELGPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGXXXXXXXXXXXXXXXXXXXVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVV-------------------------------LRDTVMTKGCLGPEE 772          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 1.210e-136
Identity = 219/400 (54.75%), Postives = 276/400 (69.00%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVK-DLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDD--KPALKRSPGVRYLEHGK--------NQFKEQIEDVLDAAECLEPDVQPTVEIDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA 1167
            W+R+FR  GGF+RDARG+HE DWIMSEEDL   L+AWM S+ R ++K+V  YIN  L  +D + DL RL +YQV LP+SM T H WM+RLGC Y+R TKS+YTDTHE  +V + R  YI+++R+ ALRQ  WVRV++ +L   E++RL+ +K    + DFY+EV  C I G +CIEFHVD LRD+GSV++FD LRA LGPEGG  SV +D AAAA CE+ H  +KC+C RKV HIGQDES Y A   E   W     SG                  R+GFGLP+    LA VN+KR  +   K  L RSPG+R+LE+GK        +QF+EQ+EDV+D  E ++PD+Q   E+DHSSGH KQR DGLHVSNMNVKYGGKQKVLR +V+TE+CLGP EA
Sbjct:  275 WLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKEVCKYINGPLLQDDKEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKSRGPEGDFYAEVYDCKIDGQDCIEFHVDLLRDDGSVDNFDKLRAALGPEGGDYSVCFDQAAAAQCEHFHLPNKCRCGRKVHHIGQDESAYKA---ENGVW----FSG------------------RHGFGLPISDADLAAVNSKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRLSVMTEECLGPEEA 649          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 1.340e-129
Identity = 219/397 (55.16%), Postives = 260/397 (65.49%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDDKPALKRSPGVRYLEHGKN--------QFKEQIEDVLDAAECLEPDVQPTVEIDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA 1167
            W+R+FR +GGFKRD+RG HERDWIMSEEDL  +L+ WM+++KRL+VKDV++YIN+ LF  ++ DL RLLSYQV LP+SM TTH WM+ LGC Y+RATKS+YTD HE    KKD   Y          +    RV +    PR                                        DNGSV+ FDALRA LGPEGG  SVR++ AAA PCE+ H   KCK N++VRHIGQDES+Y AYAREGKEWV+QGV G+ KK E PG MVSAFQDER+GFGLPL  DVL  VNA+R    K  L RSPG+ +L++GKN        +FKEQI          EPD+Q  VEIDHSSGHT+QR DGLHV NMNVK GGKQ VLRDT++TE CLGP EA
Sbjct:  325 WLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDQLIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHE----KKDVVVY----------RGKGARVHR---VPRRSP-----------------------------------AGDNGSVDRFDALRAELGPEGGHYSVRFEEAAALPCEHFHTPAKCKGNKEVRHIGQDESVYKAYAREGKEWVVQGVPGLWKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLWFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKNGGKQTVLRDTIMTEGCLGPKEA 669          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 3.290e-125
Identity = 238/529 (44.99%), Postives = 286/529 (54.06%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKV------------------------------------------------------------------------------------KKD----RTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGD--------------------------------------------DDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDDKPALKRSPGVRYLEHGKN--------QFKEQIEDVLDAAECLEPDVQPTVEIDHSSGH-TKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGE 1164
            W+R+FR +GGFKRD+RG HERDWIMSEEDL   L+ WM+++KRL+VKDV++YIN+ LF  ++ DL RLLSYQV LP+SM TTH WM+ LGC Y+RATKS+YTD HE   V                                                                                    KKD    R +YID KR+ ALRQ  WVRV++D+LTP EL+RL+ +KG   +                                                +EV  CV+ G ECIEFHVD LRD GSV+ FDA RA LGPEGG  SVR++ AAA PCE+ H   KCKCNRKVRHIGQDES+Y AYAREGKEWV+QGV G+RKK E PG MVSAFQDER+GFGLPL  DVL  VNA+R    K  L RSPG+R+L++GKN        +FKEQI          EPD+Q  VEIDHSSG   +  G    V   + + G K    R T VTE   GPG+
Sbjct:  214 WLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFAYEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLRVRVQRYTLTPEELQRLDGIKGPAEDFCAEVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEEFGAERGASASSSTSISCGTTAPSIDSTISVLNLXXXXXXXXXXXXXXXAEVYDCVVEGRECIEFHVDLLRDIGSVDRFDARRAKLGPEGGHYSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGXKVRHIGQDESVYKAHAREG-KVGCPRGTQVTEKNEGPGD 741          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 1.490e-112
Identity = 203/440 (46.14%), Postives = 244/440 (55.45%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDDKPALKRSPGVRYLEHGKN--------QFKEQIEDVLDAAECLEPDVQPTVE-------------------------------------------IDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA 1167
            W+R+FR +GGFK D+RG HERDWIMSEEDL   L+ WM+ +KRL+VKDV++YIN+ LF  ++ DL RLLSYQV LP+SM TTH WM+ LGC Y+RATKS+YTD HE   V   R +YID KR+ ALRQ  WVRV++D+LTP EL+RL+ +KG                                   +DF A                                           +DES+Y AYA EGK+WV+QGV G+RKK E PG MVS FQDER+GFGLPL  DVL  VNA+R    K  L RSPG+R+L++GKN        +FKEQI          EPD+Q  VE                                           IDHSSGHT+QR DGLHV NMNVKYGGKQKVLRDTV+TE CLGP EA
Sbjct:  136 WLRDFRGHGGFKLDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKG---------------------------------PAKDFCA-------------------------------------------EDESVYKAYAHEGKKWVVQGVRGIRKKTEGPGEMVSGFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEA 499          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 5.650e-111
Identity = 219/495 (44.24%), Postives = 266/495 (53.74%), Query Frame = 1
Query:    4 VREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSV----------------------------------KDVRDYINKELFTEDVK---------------------DLERL-------------------------------------LSYQV--------TLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDDKPALKRSPGVRYLEHGKN--------QFKEQIEDVLDAAECLEPDVQPTVEIDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGE 1164
            +R+FR +GG +RD+RG HERDWI SEEDL   L+ WM++++RL+V                                  KDV  Y  K +   DVK                     +L+RL                                       Y+V         LP+SM TTH WM+  GC Y+RATKS+YTD HE   V   R +YID KR+ ALRQ  WVRV++D+LTP EL+RL+ +KG    ++F +EV  CV+ G E IEFHVD +RDN SV+ FDALRA LGPEGG  S                                     AYAREGKEWV+QGV G+RKK E PG MV AFQDER+GFGLPL  DVL  VNA+R    K  L + P +R+L++ KN        +FKEQIEDVLD     EPD+Q  VEIDHSSGHT++R DGLHV NMNVKYGGKQKVLRDTV+TE CLGP E
Sbjct:  121 LRDFRGHGGSERDSRGVHERDWITSEEDLKDELIKWMRTQERLTVNLPVSMATTHSWMIVPGCKYERATKSFYTDGHEKKDVVVYRGKYI---DVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPAEEFGAEXPGEPSRVHGHNPLLDDRAGVQVRAGYEVFLHGRPXVNLPVSMATTHSWMIVPGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA--EEFGAEVYDCVVEGRESIEFHVDLVRDNDSVDRFDALRAELGPEGGHFS-------------------------------------AYAREGKEWVVQGVRGLRKKTEGPGEMVPAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTQRPDLRFLQYWKNRDGYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRDTVITEWCLGPEE 573          
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Match: A0A6H5JUX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX8_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.530e-106
Identity = 191/397 (48.11%), Postives = 225/397 (56.68%), Query Frame = 1
Query:    1 WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVRDYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSYYTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDVKGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPEGGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKEWVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDDKPALKRSPGVRYLEHGKN--------QFKEQIEDVLDAAECLEPDVQPTVEIDHSSGHTKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA 1167
            W+R+ R +GGFKRD+RG HE DWIMSEEDL   L+ WM+++KRL+V                            LP+SM TTH WM+ LGC Y+RATKS+YTD HE   V   R +YID KR+ ALRQ  WVRV++D+L P EL+RL+ +KG                                                                             KVRHIGQDES+Y AYAREGKEWV+QGV G+RKK E PG MVSAFQDER+GFGLPL  DVL  VNA+R    K  L RSPG+R+L++GKN        +FKEQI          EPD+Q  VEIDHSSGHT+QR DGLHV NMNVKYGGKQKVLRDTV+TE CLGP EA
Sbjct:  332 WLRDLRGHGGFKRDSRGVHEWDWIMSEEDLKDELIKWMRTQKRLTV---------------------------NLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLLPEELQRLDGIKG-----------------------------------------------------------------------------KVRHIGQDESLYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEA 624          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5K2T4_9PHAE4.830e-16562.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L611_9PHAE2.020e-16057.04Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXL0_9PHAE1.680e-14453.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7P7_9PHAE5.670e-13954.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMQ7_9PHAE1.210e-13654.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JVN6_9PHAE1.340e-12955.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J4M4_9PHAE3.290e-12544.99Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JRV8_9PHAE1.490e-11246.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5X3_9PHAE5.650e-11144.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX8_9PHAE1.530e-10648.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig179contigP-littoralis_Contig179:274268..275434 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K0T4Q0
Model size1167
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.1e-18
EggNOG OGs2D06V@1|root,2SD1E@2759|Eukaryota
Cds size1167
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789859.0834482-CDS-P-littoralis_Contig179:274267..2754341680789859.0834482-CDS-P-littoralis_Contig179:274267..275434Pylaiella littoralis U1_48CDSP-littoralis_Contig179 274268..275434 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig179.61.1prot_P-littoralis_Contig179.61.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig179 274268..275434 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig179.61.1

>prot_P-littoralis_Contig179.61.1 ID=prot_P-littoralis_Contig179.61.1|Name=mRNA_P-littoralis_Contig179.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=389bp
WVREFRVNGGFKRDARGSHERDWIMSEEDLAMRLVAWMKSKKRLSVKDVR
DYINKELFTEDVKDLERLLSYQVTLPISMKTTHWWMVRLGCVYKRATKSY
YTDTHEDPKVKKDRTRYIDEKRRTALRQACWVRVRKDSLTPRELERLNDV
KGGDGDDDFYSEVNSCVIGGHECIEFHVDFLRDNGSVEDFDALRAVLGPE
GGSLSVRYDAAAAAPCEYNHPADKCKCNRKVRHIGQDESIYNAYAREGKE
WVIQGVSGMRKKPERPGLMVSAFQDERNGFGLPLPGDVLAQVNAKRALDD
KPALKRSPGVRYLEHGKNQFKEQIEDVLDAAECLEPDVQPTVEIDHSSGH
TKQRGDGLHVSNMNVKYGGKQKVLRDTVVTEDCLGPGEA
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mRNA from alignment at P-littoralis_Contig179:274268..275434-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig179.61.1 ID=mRNA_P-littoralis_Contig179.61.1|Name=mRNA_P-littoralis_Contig179.61.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1167bp|location=Sequence derived from alignment at P-littoralis_Contig179:274268..275434- (Pylaiella littoralis U1_48)
TGGGTCAGGGAGTTCCGCGTCAACGGCGGCTTCAAGCGAGATGCACGCGG TTCGCACGAGAGGGACTGGATCATGTCCGAGGAGGATCTGGCCATGCGTC TTGTCGCCTGGATGAAGTCGAAGAAGCGTCTCTCCGTGAAGGACGTCCGC GATTACATCAACAAGGAGCTGTTCACGGAGGACGTCAAAGATTTGGAGAG ACTCCTGTCGTACCAGGTGACTCTTCCCATCTCGATGAAAACGACCCACT GGTGGATGGTGAGGTTGGGGTGCGTGTACAAGCGGGCCACCAAGTCGTAC TACACCGACACCCACGAGGACCCGAAAGTCAAGAAGGACCGCACCCGCTA CATCGACGAGAAGCGAAGGACCGCGTTGCGACAAGCGTGTTGGGTGCGAG TTCGGAAAGACTCTCTGACGCCGAGGGAGTTGGAGCGGCTCAACGACGTC AAAGGAGGAGATGGGGACGATGATTTCTACTCAGAGGTTAATTCTTGCGT CATCGGCGGGCACGAGTGCATCGAGTTCCACGTCGATTTCCTGCGGGACA ACGGTTCGGTCGAAGACTTCGACGCTCTTCGCGCGGTACTTGGCCCGGAG GGTGGAAGCCTCAGCGTCCGCTACGACGCCGCTGCTGCGGCCCCCTGCGA GTACAATCATCCCGCGGACAAGTGCAAGTGCAACAGGAAAGTGCGTCACA TCGGACAGGACGAGAGCATCTACAACGCATACGCACGGGAAGGCAAGGAA TGGGTGATCCAGGGGGTGAGCGGCATGCGGAAAAAACCCGAGCGTCCGGG CCTGATGGTGTCTGCGTTCCAAGATGAGAGAAATGGCTTTGGTCTGCCGT TGCCGGGAGACGTGCTCGCCCAGGTGAACGCGAAGCGCGCGTTGGACGAC AAACCAGCCCTGAAGCGCAGCCCTGGAGTGCGCTATCTCGAGCACGGCAA AAACCAGTTCAAGGAACAGATCGAGGACGTACTGGACGCTGCTGAATGCC TCGAACCCGACGTGCAGCCGACCGTTGAGATCGACCACTCTTCGGGGCAC ACGAAGCAGCGCGGGGACGGATTGCACGTGTCGAACATGAACGTCAAGTA CGGGGGAAAGCAAAAGGTTCTCCGAGATACGGTCGTGACGGAGGACTGCT TGGGACCCGGGGAGGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig179:274268..275434-

>mRNA_P-littoralis_Contig179.61.1 ID=mRNA_P-littoralis_Contig179.61.1|Name=mRNA_P-littoralis_Contig179.61.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1167bp|location=Sequence derived from alignment at P-littoralis_Contig179:274268..275434- (Pylaiella littoralis U1_48)
TGGGTCAGGGAGTTCCGCGTCAACGGCGGCTTCAAGCGAGATGCACGCGG
TTCGCACGAGAGGGACTGGATCATGTCCGAGGAGGATCTGGCCATGCGTC
TTGTCGCCTGGATGAAGTCGAAGAAGCGTCTCTCCGTGAAGGACGTCCGC
GATTACATCAACAAGGAGCTGTTCACGGAGGACGTCAAAGATTTGGAGAG
ACTCCTGTCGTACCAGGTGACTCTTCCCATCTCGATGAAAACGACCCACT
GGTGGATGGTGAGGTTGGGGTGCGTGTACAAGCGGGCCACCAAGTCGTAC
TACACCGACACCCACGAGGACCCGAAAGTCAAGAAGGACCGCACCCGCTA
CATCGACGAGAAGCGAAGGACCGCGTTGCGACAAGCGTGTTGGGTGCGAG
TTCGGAAAGACTCTCTGACGCCGAGGGAGTTGGAGCGGCTCAACGACGTC
AAAGGAGGAGATGGGGACGATGATTTCTACTCAGAGGTTAATTCTTGCGT
CATCGGCGGGCACGAGTGCATCGAGTTCCACGTCGATTTCCTGCGGGACA
ACGGTTCGGTCGAAGACTTCGACGCTCTTCGCGCGGTACTTGGCCCGGAG
GGTGGAAGCCTCAGCGTCCGCTACGACGCCGCTGCTGCGGCCCCCTGCGA
GTACAATCATCCCGCGGACAAGTGCAAGTGCAACAGGAAAGTGCGTCACA
TCGGACAGGACGAGAGCATCTACAACGCATACGCACGGGAAGGCAAGGAA
TGGGTGATCCAGGGGGTGAGCGGCATGCGGAAAAAACCCGAGCGTCCGGG
CCTGATGGTGTCTGCGTTCCAAGATGAGAGAAATGGCTTTGGTCTGCCGT
TGCCGGGAGACGTGCTCGCCCAGGTGAACGCGAAGCGCGCGTTGGACGAC
AAACCAGCCCTGAAGCGCAGCCCTGGAGTGCGCTATCTCGAGCACGGCAA
AAACCAGTTCAAGGAACAGATCGAGGACGTACTGGACGCTGCTGAATGCC
TCGAACCCGACGTGCAGCCGACCGTTGAGATCGACCACTCTTCGGGGCAC
ACGAAGCAGCGCGGGGACGGATTGCACGTGTCGAACATGAACGTCAAGTA
CGGGGGAAAGCAAAAGGTTCTCCGAGATACGGTCGTGACGGAGGACTGCT
TGGGACCCGGGGAGGCG
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