mRNA_P-littoralis_Contig179.51.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: D8LFA7_ECTSI (MtN3-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA7_ECTSI) HSP 1 Score: 263 bits (672), Expect = 3.270e-81 Identity = 133/192 (69.27%), Postives = 160/192 (83.33%), Query Frame = 1
Query: 1 EVRRSRRVGERSVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEK-DKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQ 573
EVRRS+ VGERSV PFVCMW S LW++YGLF+ DIVPTV TN++GL S YYCAV+AWAVEPASRK+STYNLFAATFL +C+V+ FCLG F P + +QDA+S D D+ AQR LG+AASAATA+QY APLAELVKVI+RRSTEG+SL LA+VSLVCS LW++YG+++VNAFIYVPN+LG+ FS Q
Sbjct: 26 EVRRSKHVGERSVFPFVCMWASSTLWLIYGLFIGDIVPTVVTNLLGLACSCYYCAVYAWAVEPASRKSSTYNLFAATFLGICVVVTFCLGTFSPRPESWVSMQDADSTDSGGDERAQRFLGIAASAATAIQYGAPLAELVKVIRRRSTEGMSLALAVVSLVCSTLWMSYGVMLVNAFIYVPNVLGVCFSVTQ 217
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A6H5KGY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY4_9PHAE) HSP 1 Score: 241 bits (616), Expect = 2.640e-73 Identity = 123/184 (66.85%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 55 MWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEK-DKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNK 603
MW S LW++YGLF+ DIVPTV TN++GL S YYCAVFAWAVEPASRK+STYNLFAA FL +C+V+ FCLG F P +QD NS D D+ AQR LG+AASAATA+QY APLAELVKVI+RRSTEG+SL LA+VSLVCS LW++YG+++VNAFIYVPN+LG+ FS QC LF +FP +
Sbjct: 1 MWASSTLWLIYGLFIGDIVPTVVTNLLGLACSCYYCAVFAWAVEPASRKSSTYNLFAAAFLGICVVVTFCLGTFSPRSAPWVSMQDTNSTDSGGDERAQRFLGIAASAATAIQYGAPLAELVKVIRRRSTEGMSLALAVVSLVCSTLWMSYGVMLVNAFIYVPNVLGVCFSVTQCLLFCLFPRR 184
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A329RLY7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RLY7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.420e-17 Identity = 63/199 (31.66%), Postives = 103/199 (51.76%), Query Frame = 1
Query: 34 SVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNKSKSDAVRQS 630
S LP + M W +YGL + D P VATN+VGL+FS++Y V+ A++++ ++ A T +LV +V+ P + + +E+ H ++G A +AV + +PL + +VI+ R+TE L L + + V LWLAYG+++ +AF+ VPN L +Q LF FP+ D V +
Sbjct: 43 SALPVLSMVANCVAWGLYGLLIGDYFPLVATNIVGLVFSLFYLVVYYR--HEANKRSLLLDILATTLVLVGLVLY-------------PFVAASEGVEEETIHG--IVGFVTVAISAVMFGSPLVLVKRVIQERNTELLPLTMIVAGAVNCVLWLAYGLLLEDAFVIVPNAANLLLGIIQLGLFCCFPSGKTYDTVEST 224
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: H3H1Q4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1Q4_PHYRM) HSP 1 Score: 92.4 bits (228), Expect = 4.770e-17 Identity = 66/196 (33.67%), Postives = 99/196 (50.51%), Query Frame = 1
Query: 34 SVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNKSKSDAV 621
SVLP + M W +YGL + D P VATN+VGL FS++Y V+ + EP K S AT LL+ ++ + P + ++ +E+ Q ++G A +AV + +PL + +VI+ R+TE L L + + V LWL YG++ +AF+ VPN L VQ LF +FP D V
Sbjct: 43 SVLPVLSMVANCVAWGLYGLLIGDYFPLVATNIVGLAFSLFYLVVY-YRHEP--NKGSLRLEILATMLLLAGLVLY------------PFVAESEGAEEET--VQDIVGFVTVAISAVMFGSPLVLVKRVIQERNTELLPLTMIVSGAVNCVLWLGYGLLRQDAFVIVPNAANLLLGVVQLGLFGVFPRGKPYDTV 221
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A662Y2F8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2F8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 7.170e-17 Identity = 64/199 (32.16%), Postives = 101/199 (50.75%), Query Frame = 1
Query: 34 SVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNKSKSDAVRQS 630
S LP + M W +YGL + D P VATN+VG+ S++Y V+ AS K T LL+ +++A+ P++ D E+ + L+G A +AV + +PL + KV++ R+TE L L + + +V +LWLAYG+++ N+F+ VPN L VQ LF IFP D + ++
Sbjct: 3 SALPVLSMVANCVAWGLYGLLIGDYFPLVATNIVGVSLSLFYLVVY---YRHASNKARLRLHILVTTLLLSLLVAY------------PVVADY--AGERPEEVHDLVGFVTVAISAVMFGSPLVLVHKVLQDRNTELLPLAMIVAGVVNCSLWLAYGLLIGNSFVVVPNAANLLLGVVQLALFGIFPRNKTYDTLAKA 184
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A3F2RBC9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RBC9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 8.130e-17 Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = 1
Query: 76 WVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFP 597
W +YGL + D P VATN+VG+LFS++Y V+ + EP KNS T LL+ +++ + P L + +E+D H L+G A ++V + +PL + +VI+ R+TE L L + + V LWLAYG++ +AF+ VPN L VQ LF IFP
Sbjct: 8 WGLYGLLIEDYFPLVATNIVGILFSLFYLVVY-YRHEP--NKNSLRLQVLTTALLLLLLVWY------------PFLAEYMGEEEEDVH--NLVGFVTVAISSVMFGSPLVLVRRVIQERNTELLPLAMIVAGAVNCVLWLAYGLLRGDAFVIVPNAANLLLGVVQLGLFCIFP 164
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A225VV52_9STRA (MtN3-like protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VV52_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 9.430e-17 Identity = 69/205 (33.66%), Postives = 104/205 (50.73%), Query Frame = 1
Query: 34 SVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNKSKSDAVRQSDLHKGA 648
S LP + M W +YGL + D P VATN+VGL+FS++Y V+ + EP ++ + + A T +LV +V L F+ +E D NS Q ++G +AV + +PL + +VI+ R+TE L L + + V LWL YG+++ +AF+ VPN L VQ LF I+P D V + K A
Sbjct: 36 SALPVLSMVGNCVAWGLYGLLIGDYFPLVATNIVGLIFSLFYLIVYYY-YEP-NKCSLRLEILATTLVLVGLV----LYPFVAASEE----VDENS-------IQSIVGFVTVGISAVMFGSPLVLVKRVIQERNTELLPLTMIVAGAVNCVLWLVYGLLLNDAFVIVPNAANLLLGVVQLGLFCIYPRGGTYDKVESNSKGKKA 223
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A662YGC8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGC8_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.980e-16 Identity = 62/199 (31.16%), Postives = 101/199 (50.75%), Query Frame = 1
Query: 34 SVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNKSKSDAVRQS 630
S LP + M W +YGL + D P VATN+VG+ S++Y V+ AS + T LL+ +++A+ P++ D ++ H L+G A +AV + +PL + KV++ R+TE L L + + +V +LWLAYG+++ ++F+ VPN L VQ LF IFP D + ++
Sbjct: 3 SALPVLSMVANCVAWGLYGLLIGDYFPLVATNIVGVSLSLFYLVVY---YRHASNQARLLLHILVTTLLLSLLVAY------------PVVADYAGEQPEEVH--DLVGFVTVAISAVMFGSPLVLVHKVLQDRNTELLPLAMIVAGVVNCSLWLAYGLLIGDSFVVVPNAANLLLGVVQLALFGIFPRNKTYDTLAKA 184
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A6A3IKQ7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IKQ7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.930e-16 Identity = 64/199 (32.16%), Postives = 98/199 (49.25%), Query Frame = 1
Query: 34 SVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNKSKSDAVRQS 630
S LP + M W +YGL + D P VATN+VGL FS++Y V+ + K S AT L++ ++A+ P + A + D+ Q ++G+ A +AV + +PL + +VI R+TE L L + + V LWLAYG++ ++F+ VPN L VQ LF +FP D V +
Sbjct: 42 SALPVLSMVANCVAWGLYGLLIEDYFPLVATNIVGLTFSLFYLVVY---YRHEANKGSLRLEILATTLVLAGLVAY------------PFVAAAEGVE--DETVQDIVGVVTVAISAVMFGSPLVLVKRVIDERNTELLPLTMIVAGAVNCVLWLAYGLLRADSFVIVPNAANLLLGVVQLGLFCVFPRGGVYDTVESA 223
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Match: A0A2P4WXM1_9STRA (Elicitor-like transglutaminase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXM1_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 7.990e-16 Identity = 65/203 (32.02%), Postives = 102/203 (50.25%), Query Frame = 1
Query: 34 SVLPFVCMWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNSTYNLFAATFLLVCMVIAFCLGEFIPLLDEDPLLQDANSGDEKDKHAQRLLGLAASAATAVQYAAPLAELVKVIKRRSTEGLSLMLALVSLVCSALWLAYGIIVVNAFIYVPNMLGLFFSAVQCFLFWIFPNKSKSDAVRQSDLHK 642
S LP + M W +YGL + D P VATN+VGL S++Y V+ + A++ + + A T +LV +V L F+ A+S +++ Q ++G +AV + +PL + +VI+ R+TE L L + + V LWLAYG+++ +AF+ VPN L VQ LF ++P D V S K
Sbjct: 423 SALPVLSMVGNCVAWGLYGLLIGDYFPLVATNIVGLTLSLFYLIVYYY--HEANKCSLRLEILATTLVLVGLV----LYPFV-----------ASSEGVEEESIQNIVGFVTVGISAVMFGSPLVLVKRVIQERNTELLPLTMIVTGAVNCILWLAYGLLLNDAFVIVPNAANLLLGVVQLGLFCVYPRGGTYDTVESSSKRK 608 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.51.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig179.51.2 >prot_P-littoralis_Contig179.51.2 ID=prot_P-littoralis_Contig179.51.2|Name=mRNA_P-littoralis_Contig179.51.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=200bp MWCCSALWVVYGLFVWDIVPTVATNVVGLLFSMYYCAVFAWAVEPASRKNback to top mRNA from alignment at P-littoralis_Contig179:240423..244922+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig179.51.2 ID=mRNA_P-littoralis_Contig179.51.2|Name=mRNA_P-littoralis_Contig179.51.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4500bp|location=Sequence derived from alignment at P-littoralis_Contig179:240423..244922+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig179:240423..244922+ >mRNA_P-littoralis_Contig179.51.2 ID=mRNA_P-littoralis_Contig179.51.2|Name=mRNA_P-littoralis_Contig179.51.2|organism=Pylaiella littoralis U1_48|type=CDS|length=600bp|location=Sequence derived from alignment at P-littoralis_Contig179:240423..244922+ (Pylaiella littoralis U1_48)back to top |