mRNA_P-littoralis_Contig178.71.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 1.270e-130 Identity = 232/458 (50.66%), Postives = 289/458 (63.10%), Query Frame = 3
Query: 471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAAIAASYKCAELPAARFQKVGVGTREL-------LERAETRRSRVRVA 1817
RS SSNA ++ +K + +QFP A+ KFV+PA RWMVV DGA L RWEQVEW FC +A+ +L T ++ +W QSA++LRDP +RV +FTA+LGELL WAY W+RG GGFFLKG G+GR L+ GMRLVE+ADFS L K+ET+R + A+L+ +TTL FM NFS D+GFF RW KWMERHQ+L LSMAR+G F+A ++G +E VG +FARAFLHV WS Y RT+RE YR QL K+L G T +RKDELTFG FS D D +R LEQ+A + VD AP+ TS A L F LY++ CHRFYFVPIHQQL+E+FFSKFD+C QKTD + D VR G ++S ESR I ATGE+I AGK+ + A A A S+ A PA + V E LE+ RR RV A
Sbjct: 36 RSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKGE--GVGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSH--ARKPAENLSRKRVLEPEAADDLLVTLEKEGNRRPRVTAA 489
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 375 bits (962), Expect = 2.600e-120 Identity = 210/418 (50.24%), Postives = 266/418 (63.64%), Query Frame = 3
Query: 471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGH-FMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAAIAASY 1715
RS SNA+++ +K + A QFP+A+ KF++PA RWMVV DGA L +RWEQVEW FC +A+ +L T ++ +W QSA +LRDP +RV +FTA+LGELL WAY W+ G GGFFLKG G+GR L+ MRLVE ADFS L +K+ET+R + ALL RTTL G F V Q F RW K M+RHQEL LSMAR+G FYA ++GG +E VG +FARAF HV W Y RT+RE YR QL K+L G T+ +RKDELT G FS DGD +R LEQ+A + +D AP+ TS A L LY + CHRFYFVPIHQQL+E+FFSK+D+C +KTD + D VR G ++S ESR I V A ++I GAGK+ + AT A A S+
Sbjct: 36 RSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGE--GVGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLSDPMRGESFRVELQRGQFFIAEFKKRWIKSMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEPRTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEIDESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATEAKAISH 451
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE) HSP 1 Score: 316 bits (810), Expect = 2.190e-98 Identity = 184/379 (48.55%), Postives = 230/379 (60.69%), Query Frame = 3
Query: 582 MVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAAIAASY 1715
MVV DGA L +RWEQVE FC +A +L T + +W QSA++LRDP+ V +FTA+L ELL WAY W+ G GGFFLKG G+ R L+ GMRLVE+ADFS L +K+ET+R + ALL R TL + FM+ FS D+ FF RW KWM+RHQEL LSMAR+G FYA ++GG +E VG +FARAFLHV W Y RT+RE YR QL K+L G T+ +RKDELTFG FS DGD +R LEQ+A +D AP+STS+ A LL F LY++ CHRFYFVPIHQQL+E+FFSK C ATG++I GAG + ++ AT A A S+
Sbjct: 1 MVVIDGAKLLCERWEQVERLFCDFA-RNLNKTTVRNYWVQSAYMLRDPFFHVHVMFTARLKELLFDWAYNWIHGKGGFFLKGE--GVDRRLFPGMRLVEVADFSRLLLQKLETIRKDPKTYFAALLDRVRATLSDPMVKFFMLAFSEDRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEPRTEREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGWGNKEIDESAPKSTSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSKNIVCAD---------------------------ATGDQISGAGNKVLTEATEAKAISH 349
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE) HSP 1 Score: 273 bits (697), Expect = 2.530e-82 Identity = 156/313 (49.84%), Postives = 193/313 (61.66%), Query Frame = 3
Query: 582 MVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQ 1517
MV D A L DRWEQV W FC +A+ +L T ++ +W QS +LLRDP +RV + TA+LGELL WAY W+RG GGFFLK G+GR L+ GMRLVE+ADFS L K+ET+R E T ++L F N S D+GFF L RW KWMERHQ+L LSMAR+G FYA ++ +E VG +FARAFLHV W Y RT+RE +R QL K T+ +RKDELTFG FS D D +R LEQ+A ++ VD AP+ TS A L + LY++ CHRFYFVPIHQQ
Sbjct: 1 MVDTDRAKLLCDRWEQVSWLFCKYAARYLNKTTFRNYWLQSVYLLRDPILRVHVMLTARLGELLFDWAYNWIRGKGGFFLKCE--GVGRRLFPGMRLVEVADFSRLLLLKLETIRKDPE-----------TYFAAEKL--FTTNCSEDKGFFALFKKRWIKWMERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEPRTEREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGWSDKEVDQGAPKGTSALACLFDYPLLYKLVCHRFYFVPIHQQ 298
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 257 bits (656), Expect = 6.530e-72 Identity = 175/441 (39.68%), Postives = 231/441 (52.38%), Query Frame = 3
Query: 462 MFVRSNSSNAAWEYKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQE----------------------LGHFMVNFSPDQ-GFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWKVLGGVP-MEYPVGQQFARAFLHVVWSEKYRQASRT--QREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHA--EAVVDVDAPEST---SKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSA 1691
M RS+SS +WE + N KF++PA RWMVV+D A L DRW++V W WA+ LL T + +W +S +L DP IRV F L +++L WAY W+RG+GG+ L+G GG+ L GMRL ++ADFSLL E++E LR + P LL A TL +E L HFM NF ++ G F +RW+KWM+ HQ L SMARL S F+ K G +E+ VGQ++ARA L +W E A E Y L +L A + KDELTFG FS + + R +E+++ A E VVD DA S F + F LYE A H F PIHQQLV+S S +DTC QK D+ VR GQFRS +SR + + AT +EI AG + I+ A
Sbjct: 282 MECRSDSSCISWE-RFQNLVFGCKGVKWGCKFIRPAETRWMVVWDAAALLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGR-GGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKSGLFREMIARWTKWMDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDDDAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVA 720
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE) HSP 1 Score: 218 bits (556), Expect = 1.430e-59 Identity = 194/586 (33.11%), Postives = 243/586 (41.47%), Query Frame = 3
Query: 471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASE-------------------------HLLLTA--------------------------------------YKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLA----------------------RTT----------------------------LKTQELGH------------------FMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWKVLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAA--IAASYKCAE-LPAARF--QKVGVGTRELLERAETRRSRVRVA 1817
RS SSNA ++ +K + A QFP+A+ KF++PA RWMVV DGA L +RWEQVEW FC +A+ H++ TA Y+ +W QSA +LRDP +RV +FTA+LGELL WAY W+ G GGFFLKG G+GR L GMRLVE+ADFS L +K+ET+ + LA RTT L QEL FM+NFS D FF RW KWM+RHQEL LSMAR+G FY SRT +G L KDELTFG FS DGD +R EQ+A + +D AP+ TS A L F LY++ CHRFYFVP QQL+E+FFSK C ATG+ I GAGK+ + AT A I+ + K AE L R + ++LE+ +RR RV A
Sbjct: 36 RSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEWLFCEYAAGNLNKTTYRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGE--GVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFXQQGYLAHPGNTFHXXXXXXXXXXXVPHNRTTTWHCYKYIYHGRRLFPGMRSVEVADFSRLLLQELETIRKDPQTYFAALLDRAKLFMLNFSEDSFFFAEVKKRWIKWMQRHQELPLSMARIGCPSFY----------------------------------SRT-------GTMGGGL--------KDELTFGEFSGVDGDLSVRSEPEQYANSGWGDKEIDESAPKGTSALARLFDFPLLYQLVCHRFYFVPNPQQLIEAFFSKDIVCAD---------------------------ATGDRIRGAGKKVLKEATEAKPISHARKLAENLSRKRVLEPEAAEDLLDVLEKEGSRRPRVTAA 543
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE) HSP 1 Score: 205 bits (522), Expect = 1.320e-56 Identity = 110/220 (50.00%), Postives = 143/220 (65.00%), Query Frame = 3
Query: 957 LKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYA-WKVLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLL-KFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRS 1610
++ A T E HFMVNFS D FF RW KWM+RHQEL LSMAR+G FYA ++G +E VG ++ARAFLHV W E+Y R++RE YRVQLG++ G +RKDELTFG FS+ + D +MR +E +AE + VD +A + T+ L KF LY+ C RFYFVPIHQQL+E+FFSK+DTC +KTD +V DSVR G +++
Sbjct: 148 IRPAETRWMVAEKKHFMVNFSEDSFFFAEFNMRWKKWMQRHQELPLSMARIGCPSFYARMGIMGKGAVEQAVGPEYARAFLHVGWPERYEGEPRSEREREYRVQLGEDFGGVIDARRKDELTFGLFSIVEEDAEMRCEVEGYAESGFGDKEVDEEAEKGTTALVRLFEKFPRLYKFVCVRFYFVPIHQQLIEAFFSKYDTCAKKTDVAVMDSVRVGSWQT 367
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE) HSP 1 Score: 180 bits (457), Expect = 4.380e-49 Identity = 97/187 (51.87%), Postives = 125/187 (66.84%), Query Frame = 3
Query: 471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQ 1028
RS SSN ++ +K + A QFP+A+ KF++PA RWMVV DGA L +RWEQVEW FC +A+ +L T ++ +W QSA +LRDP +RV +FTA+LGELL WAY W+ G GGFFLKG G+GR L GMRLVE+ADFS L +K+ET+ + ALL RTTL FM+NFS D+
Sbjct: 36 RSGSSNGKFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGE--GVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFAALLDRVRTTLSDPMAKVFMLNFSEDR 220
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE) HSP 1 Score: 177 bits (448), Expect = 3.680e-47 Identity = 103/212 (48.58%), Postives = 133/212 (62.74%), Query Frame = 3
Query: 618 RWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWKVLGGVPMEYPV-GQQFARAFLHVVWSEKYRQASRTQREE 1250
RW++VE +A+ +L T ++ +W QSA++LR+P +RV +FTA+LGELL WA W+RG GGFFLKG G+GR L+ GMRLVE+AD S L K+ET+R + A+L+ RTTL FM NFS D+ FF RW KWMERHQ+L LSMAR+ FYA G+ + V G +FARAFLHV W Y RT+R E
Sbjct: 46 RWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKGE--GVGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNFSEDKVFFAEFKKRWIKWMERHQQLPLSMARIACPSFYART---GIMADGAVEGPEFARAFLHVAWPGLYEGEPRTERGE 252
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5KE81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE81_9PHAE) HSP 1 Score: 151 bits (382), Expect = 2.680e-38 Identity = 79/153 (51.63%), Postives = 107/153 (69.93%), Query Frame = 3
Query: 471 RSNSSNAAW-EYKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLR 926
RSNSSN + ++ L A++FP A+ KF+KPA RWMVV DGA L +RW++V W F WA+ ++ T Y+ +W +SA L+DP + VQ +F A+LGEL+ WAY W+RG GGFFLK G+GR L+ GMRLVE+ADFS L +K+ET+R
Sbjct: 8 RSNSSNTNFLRWQKLVADEFPAAKPWTKKFIKPAETRWMVVMDGAKILFERWDEVAWLFGEWAACNIGKTTYRNYWLKSAVALQDPLMLVQVMFAARLGELVFDWAYNWIRGKGGFFLKCE--GVGRRLFPGMRLVEVADFSRLLLQKVETIR 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig178.71.1 >prot_P-littoralis_Contig178.71.1 ID=prot_P-littoralis_Contig178.71.1|Name=mRNA_P-littoralis_Contig178.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=418bp MVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIback to top mRNA from alignment at P-littoralis_Contig178:375549..378773+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig178.71.1 ID=mRNA_P-littoralis_Contig178.71.1|Name=mRNA_P-littoralis_Contig178.71.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3225bp|location=Sequence derived from alignment at P-littoralis_Contig178:375549..378773+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig178:375549..378773+ >mRNA_P-littoralis_Contig178.71.1 ID=mRNA_P-littoralis_Contig178.71.1|Name=mRNA_P-littoralis_Contig178.71.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig178:375549..378773+ (Pylaiella littoralis U1_48)back to top |