mRNA_P-littoralis_Contig175.51.6 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig175.51.6
Unique Name	mRNA_P-littoralis_Contig175.51.6
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A6H5L901_9PHAE (LsmAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L901_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 1.450e-160
Identity = 341/474 (71.94%), Postives = 355/474 (74.89%), Query Frame = 3

Query:  513 AVG-DGYKLACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDSRGGTLLLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSI--SGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTGGMTSHQRRATGXXXXXXXXXXXXXXXXXXXXXXGQHSNHGHGXXXXXXXGGXXXXXXXXXXXXXXXXXRDSGPPGPRYATSRGRASPPQSGAXXXXXXXXXXXXXXXXXX-------NKSPAGTGVYVPPALRAAXXXXXXXXXTLSPTPAQMMERG-PGAGPXXXXRGAXXXXXXXXXXETMPRSDADAAXXXXXXXXXXXRSEEAKEAAKAQLMDVLDGKL 1901
            AVG D YK+ACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVL P GDDPRPG +RGMYRVIMRA  VQG+ DQSNGGQSKIDSRGGTL+LSGDDIVSIAVKRFPMQ SAQRPKGLGTDSDIGGRAG       LGVER+LQAVDTSWV SS+NMSI  SGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPL+TG+LSR Q+AHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTGGM SHQRR+        XXXXXXXXXXXX    GQH +HG                            RD GP  PRY  +R R SP QSG     XXXXXXXXXXXXXX       NK+PAG GVYVPPALRAA  XXXXXXX  SPTPAQ+MERG P AG      G              PRS A      XXXXXXXX   EAKEAAKAQLMDVLDGKL
Sbjct:   88 AVGSDSYKMACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLTP-GDDPRPGAKRGMYRVIMRAAKVQGATDQSNGGQSKIDSRGGTLMLSGDDIVSIAVKRFPMQRSAQRPKGLGTDSDIGGRAGGGG---QLGVERRLQAVDTSWVESSSNMSIPQSGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPLDTGSLSRAQMAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTGGMASHQRRSX-------XXXXXXXXXXXXRHIHGQHHSHG-------------------------GVGRDPGPSAPRYTPARMRVSP-QSGPGGPGXXXXXXXXXXXXXXXXXXXXXNKNPAGPGVYVPPALRAAGGXXXXXXX--SPTPAQVMERGSPAAGGAPPKAGT-------------PRSAA-----AXXXXXXXXXXXEAKEAAKAQLMDVLDGKL 504

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: D7FVW6_ECTSI (LsmAD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW6_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 2.780e-142
Identity = 261/357 (73.11%), Postives = 278/357 (77.87%), Query Frame = 3

Query:  276 SSRDSPRQGSSSTNGGLNGATPRGSS-GGTGAWGSGR-----PSFSVATKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVG---DGYKLACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDSRGGTLLLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSI--SGGGGAGKWDQFAANEK---------LFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTGGMTSHQRRAT 1286
            SSRDSPR G+SS++       PR     G GAWGSGR     P+FS + +QXXXXXXX                          SAV    DGYK+ACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVL P G++PRPG +RGMYRVIMRA  VQG+ DQSNGGQSKIDSRGGTL+LSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAG       LGVERKLQAVDTSWV SS+NMSI  SGGGGAGKWDQFAANEK         LFNVTSTFDENLYTTPL+TG+LSR Q+AHAERMAAEIEGKTS NIHMREERNMLTEQDKAMGEEERFSGVLGTGGM SHQRR+T
Sbjct:   15 SSRDSPR-GNSSSSANXXXXXPRXXXXSGMGAWGSGRLERSAPAFSASKQQXXXXXXXVPQQQH--------------------SAVAPGSDGYKMACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLTP-GEEPRPGAKRGMYRVIMRAAKVQGATDQSNGGQSKIDSRGGTLMLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGGGS---QLGVERKLQAVDTSWVESSSNMSIPQSGGGGAGKWDQFAANEKCGEVSAMCGLFNVTSTFDENLYTTPLDTGSLSRAQMAHAERMAAEIEGKTSGNIHMREERNMLTEQDKAMGEEERFSGVLGTGGMASHQRRST 346

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A7S1TU51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU51_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.040e-31
Identity = 97/241 (40.25%), Postives = 129/241 (53.53%), Query Frame = 3

Query:  543 RDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAG--DDPRPGGRRGMYRVIMRAVT-VQGSADQSNGGQSKIDSRGGTLLLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSISGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTG 1256
            RDR+++    ++G+      + G  YEGVFH   P+   DD         ++V +RA   V G+A             G T LL   ++V IA     ++  A       TD+DI G A       N   ER+LQAVD SWV    + +++G   AGKWDQF ANE+L+ V +TFDENLYTT L+ G  +  Q+  AER+A EIEGK SSN+HM EER      D  + EEERFSGV+  G
Sbjct:   50 RDRFIHTLTKLVGKSVTARMSDGTQYEGVFHSAAPSATADD---------HKVAIRAARLVAGTAKDGF-------VPGSTALLQWRNVVHIACLSVDLRRDAPSAGSFSTDTDISGGA-------NATGERRLQAVDASWVTGEVDGNMAGR--AGKWDQFEANERLYGVKNTFDENLYTTRLDKGKFTETQMREAERLAREIEGKKSSNVHMAEERGHKI--DDTVTEEERFSGVIRNG 263

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A7R9UGP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGP2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 5.180e-30
Identity = 86/241 (35.68%), Postives = 124/241 (51.45%), Query Frame = 3

Query:  534 LACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDSRGGTLLLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSISGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTG 1256
            L  RDR+++     +G+        G VYEGV+HV   +            +++ +RA  +      + G   +    G T L+   D++ +      ++  A       TDSDI G AG       +  +R L +VD SW+G++    +SG   AG WDQF  NE+L+ V +T+DENLYTT LN   L+ EQ+  A+R+A +IEGKTSSN H+ EER    E    + EEERFSGV   G
Sbjct:   46 LLARDRFLHTLVKFVGKPVIAKMADGTVYEGVWHVATASSPADE-------HQLAIRAARI------TAGEVPEGFVPGSTALVQWRDVLCVNCLSVDLRRDAPAAGAFSTDSDISGGAG------RVAGDRALHSVDPSWIGANVEGGLSGK--AGDWDQFEVNERLYGVQNTYDENLYTTALNKADLTPEQLTEADRIARQIEGKTSSNPHIAEERGH--ELRSNLTEEERFSGVTRNG 263

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A1Z5KM69_FISSO (LsmAD domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM69_FISSO)

HSP 1 Score: 120 bits (300), Expect = 2.790e-24
Identity = 82/266 (30.83%), Postives = 134/266 (50.38%), Query Frame = 3

Query:  537 ACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDSRGGTLLLSGDDIVSIAVKRFPMQH-------SAQRPKG-LGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSISGGGGA---------------------GKWDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVL 1247
            A R+R++++   M+G++ ++T   G VY G+FH   P      P  +R  ++ +++AV++  +  + + G       G TL++    +V + +K   M         ++  P G   TD++I G+        N G  + L A  ++W     +   SG G +                     G WDQF ANE+LFNV +++DENLYTT L+  T+ +E++ HAE++A EIEG  SSN H+ EER    + D    EE+ +SGVL
Sbjct:   58 ALRERFLHLLLNMVGQKVQMTLVDGAVYGGIFHTATPFPS--LPADQR--HKFVLKAVSILQAPKEQHAGVKA----GQTLVVDMSQVVHLHLKSIRMDALTNNNNVTSSNPNGSFQTDTEISGK--------NSGGNKGLVAAGSAWTTPIASPPSSGNGNSRADALLGNAPRPVQAGLQGSIGGWDQFKANEQLFNVKASYDENLYTTELDKSTMDQEKIEHAEKLAREIEGAASSNPHIAEERGHKIQGD--YDEEDLYSGVL 305

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A6S8VWH1_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8VWH1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.050e-23
Identity = 87/293 (29.69%), Postives = 135/293 (46.08%), Query Frame = 3

Query:  543 RDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDSRGGTLLLSGDDIVSIAVKRFPMQHSAQRPKGLG------------TDSDI--GGRAGXXXXXXNLGVERKLQAVDTSWV------------GSSTNMSISGGGGA-------------------GKWDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTGGMTSHQRRAT 1286
            R+R++++T  ++G+   +T T G   EGVFH   P     +   R   Y +    +T QG   ++  G +      G+L++  +++  + VK   ++ + +     G            TD+DI  GG A          V   L    +SWV            G  +N + S  GG                    G+WDQF ANE  F V ++FDE+LYTT L+  ++ R+Q   A RMA EIEG+ ++N+H+ EER    E D    EE+++SGVL TGG  + Q+  T
Sbjct:   58 RERFLHLTLNLLGQTVSLTLTDGSEIEGVFHTFTPFQMSGKNKDRSNKYVIKAARITKQGEDGKNEVGPA------GSLIVPAEEVSQLLVKSIRLEQANRSAAAAGNAPSNSNGDAFVTDTDISSGGAA----------VSDDLVMASSSWVTSEGGNGGGLDSGGLSNKADSSMGGRKGMFGTKTAGKDDSMRGNIGEWDQFKANEAQFGVKASFDESLYTTSLDKNSVDRKQKLEAARMAREIEGQATTNMHLAEERGQAIEGD--YDEEDKYSGVLVTGGEEAKQKERT 332

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A7S1CSV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CSV7_9STRA)

HSP 1 Score: 108 bits (271), Expect = 4.910e-23
Identity = 79/240 (32.92%), Postives = 114/240 (47.50%), Query Frame = 3

Query:  546 DRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSK-IDSRGGTLLLSGDDIVSIAVKRFPMQHSAQRPK--GLGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSISGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTG 1256
            DR++     ++G+   +   SG  Y G+F  L      P  GG       +  A++          G +    + G TL++   ++++I         S  R +  G  TD  I G         + G  R+L    T WV   T+ S+   G  G WDQF AN + F V +TFDE+ YTT ++ G +S  Q A AER+A EIEGK SSN+H+ EER      D  + EE+R+  VLGTG
Sbjct:    8 DRFVFALINLIGQHVNVVLASGAEYRGIF--LTAVRGAPDAGGS------VTVALSSPALVKPPRAGDAPPAVAPGTTLMIPAVEVLAINALEIEFGGSLDRARSGGFATDKAISGAG-------DGGARRELVEA-TDWVSGPTDASMEMTGSRGNWDQFEANRRQFGVKTTFDEHEYTTRIDHGRISGAQRARAERLAREIEGKKSSNVHVAEERGQRLPDD-GLDEEDRYGAVLGTG 230

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A7S3Y065_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y065_HETAK)

HSP 1 Score: 100 bits (250), Expect = 8.340e-22
Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 3

Query:  987 GGGGAGK----WDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTGGMTS 1268
            GGGG G+    WDQF ANE+LFNV STFDENLYTT L+ G L+  Q+A AER+A EIEGK ++N+H+ EER    E+D    EEER+ GV  +GG+ +
Sbjct:    3 GGGGPGRGPQPWDQFEANERLFNVRSTFDENLYTTALDRGALTAAQLAAAERLAREIEGKKATNLHLAEERGQAWERDYT--EEERYGGVQASGGLAA 98

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A6A5Y7F4_9PLEO (LsmAD domain-containing protein n=1 Tax=Aaosphaeria arxii CBS 175.79 TaxID=1450172 RepID=A0A6A5Y7F4_9PLEO)

HSP 1 Score: 112 bits (281), Expect = 8.880e-22
Identity = 87/244 (35.66%), Postives = 123/244 (50.41%), Query Frame = 3

Query:  546 DRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDS---RGGTLLLSGD--DIVSIAVKRFPMQHSAQRPK-----GLGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSISGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQV-AHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGV 1244
            DR M +  ++ G    IT  +G  Y GV      +G    P   R +++++ R   VQGS  Q NG     D    +G   ++S D  D+    V    +  S  R +     G  TD+DI G             ER LQ  + S   S+ + S+   G  G WDQFA NEKLF VTS +DEN+YTT +N    +  Q  A A ++A+EIEG +S+N H+REER + +  DK + EEE++SGV
Sbjct:   75 DRMMFLLASLTGLPGHITLKNGEKYTGVL-----SGTSLDPTEMRYVFKMVKR---VQGSDAQVNGTSEPSDDYVGQGENHVMSFDIGDVADFNVSNVILNKSQSRTQNGASTGFRTDTDISGHMSMK--------ERTLQKWEPS-TDSNADFSLESSGSTG-WDQFATNEKLFGVTSNYDENIYTTTINYNDPAYAQKHARASKLASEIEGSSSTNAHVREERGLTSADDKGLDEEEKYSGV 300

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BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Match: A0A8J2T1K2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1K2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.210e-20
Identity = 81/238 (34.03%), Postives = 112/238 (47.06%), Query Frame = 3

Query:  537 ACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDSRGGTLLLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGXXXXXXNLGVERKLQAVDTSWVGSSTNMSISGGGGAGK-WDQFAANEKLFNVTSTFDENLYTTPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVL 1247
            A RDR++ V   ++G+R E       V EGV H   P  D P        ++++++   V    D       +  +   T +L  D  V +   R P      R  G  TD DI           NL   RKL+AVD SW+ +    +       GK WDQF AN +LF   S FDEN YTT L+   L+ +Q A AE++A EIEG  + N+H+ EER    +      EE+RFSGV+
Sbjct:   11 AKRDRYLYVMALLVGQRGEADLGDKKV-EGVLHTSTPFADLP--------HKIVLKGARVVDDTDP------RATAPSSTQILDADK-VKLLTFRCPRVVGDPRSSGFRTDGDIA------RPDRNL-AGRKLEAVDNSWLSAPKIKNQPARQTPGKKWDQFEANARLFGTKSEFDENHYTTALDASALTPQQRADAEKIAREIEGARTDNVHLAEERGQ--DIGDTRDEEDRFSGVV 223

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot

BLAST of mRNA_P-littoralis_Contig175.51.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L901_9PHAE	1.450e-160	71.94	LsmAD domain-containing protein n=1 Tax=Ectocarpus...	[more]
D7FVW6_ECTSI	2.780e-142	73.11	LsmAD domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A7S1TU51_9STRA	1.040e-31	40.25	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7R9UGP2_9STRA	5.180e-30	35.68	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A1Z5KM69_FISSO	2.790e-24	30.83	LsmAD domain-containing protein n=2 Tax=Fistulifer...	[more]
A0A6S8VWH1_9STRA	4.050e-23	29.69	Hypothetical protein n=2 Tax=Chaetoceros debilis T...	[more]
A0A7S1CSV7_9STRA	4.910e-23	32.92	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A7S3Y065_HETAK	8.340e-22	56.12	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A6A5Y7F4_9PLEO	8.880e-22	35.66	LsmAD domain-containing protein n=1 Tax=Aaosphaeri...	[more]
A0A8J2T1K2_9STRA	3.210e-20	34.03	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig175	contig	P-littoralis_Contig175:256218..267104 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FVW6
Preferred name	ATXN2
PFAMs	LsmAD,PAM2,SM-ATX
Model size	2388
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00004,RC02888,RC02997
KEGG ko	ko:K15397
KEGG Reaction	R09419,R10825
KEGG Pathway	ko00062,ko01110,map00062,map01110
KEGG Module	M00415
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000226,GO:0000278,GO:0000280,GO:0000902,GO:0000910,GO:0001654,GO:0001709,GO:0001745,GO:0001751,GO:0001754,GO:0002090,GO:0002091,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005102,GO:0005154,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005794,GO:0005802,GO:0005829,GO:0005844,GO:0006139,GO:0006259,GO:0006403,GO:0006417,GO:0006725,GO:0006807,GO:0006810,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007088,GO:0007143,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007548,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0007622,GO:0007623,GO:0007626,GO:0008022,GO:0008064,GO:0008104,GO:0008150,GO:0008152,GO:0008284,GO:0008406,GO:0008585,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009653,GO:0009794,GO:0009887,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009994,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010564,GO:0010603,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010720,GO:0010824,GO:0010826,GO:0010941,GO:0010942,GO:0010948,GO:0010968,GO:0012505,GO:0015931,GO:0016020,GO:0016043,GO:0016048,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0019953,GO:0021533,GO:0021549,GO:0021575,GO:0021587,GO:0021680,GO:0021692,GO:0021694,GO:0021695,GO:0021696,GO:0021697,GO:0021702,GO:0021953,GO:0022008,GO:0022037,GO:0022402,GO:0022412,GO:0022414,GO:0022416,GO:0022607,GO:0022613,GO:0022618,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030716,GO:0030832,GO:0030833,GO:0030902,GO:0030953,GO:0031110,GO:0031111,GO:0031113,GO:0031115,GO:0031122,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031333,GO:0031440,GO:0031441,GO:0031644,GO:0031974,GO:0031981,GO:0031984,GO:0032092,GO:0032268,GO:0032270,GO:0032271,GO:0032272,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032879,GO:0032880,GO:0032886,GO:0032887,GO:0032888,GO:0032954,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033206,GO:0033365,GO:0033962,GO:0034063,GO:0034248,GO:0034250,GO:0034613,GO:0034622,GO:0034641,GO:0035770,GO:0036464,GO:0040001,GO:0040008,GO:0040014,GO:0040015,GO:0040019,GO:0040020,GO:0040038,GO:0042051,GO:0042127,GO:0042461,GO:0042462,GO:0042592,GO:0043007,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043393,GO:0043570,GO:0043900,GO:0043902,GO:0043933,GO:0044057,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044380,GO:0044422,GO:0044424,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045137,GO:0045165,GO:0045475,GO:0045595,GO:0045597,GO:0045727,GO:0045786,GO:0045787,GO:0045806,GO:0045836,GO:0045840,GO:0045926,GO:0045931,GO:0045934,GO:0045977,GO:0045995,GO:0046483,GO:0046530,GO:0046545,GO:0046605,GO:0046606,GO:0046660,GO:0046958,GO:0046959,GO:0048232,GO:0048259,GO:0048261,GO:0048285,GO:0048468,GO:0048471,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048592,GO:0048599,GO:0048608,GO:0048609,GO:0048638,GO:0048640,GO:0048646,GO:0048666,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048872,GO:0050657,GO:0050658,GO:0050684,GO:0050686,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050807,GO:0050877,GO:0050890,GO:0050896,GO:0050905,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051235,GO:0051236,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051293,GO:0051301,GO:0051302,GO:0051321,GO:0051445,GO:0051446,GO:0051493,GO:0051494,GO:0051495,GO:0051606,GO:0051640,GO:0051641,GO:0051642,GO:0051649,GO:0051651,GO:0051653,GO:0051656,GO:0051657,GO:0051661,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051823,GO:0051983,GO:0051984,GO:0060147,GO:0060149,GO:0060236,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060322,GO:0060341,GO:0060627,GO:0060631,GO:0060903,GO:0060964,GO:0060965,GO:0060966,GO:0060967,GO:0060968,GO:0060969,GO:0061458,GO:0061640,GO:0061842,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070507,GO:0070727,GO:0070851,GO:0070925,GO:0071539,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072698,GO:0080090,GO:0080154,GO:0090066,GO:0090068,GO:0090169,GO:0090224,GO:0090304,GO:0090328,GO:0090596,GO:0097159,GO:0097167,GO:0097435,GO:0098791,GO:0110028,GO:0110053,GO:0120036,GO:0120039,GO:0140013,GO:1900363,GO:1900364,GO:1901214,GO:1901216,GO:1901360,GO:1901363,GO:1902115,GO:1902412,GO:1902846,GO:1902850,GO:1902903,GO:1902904,GO:1903046,GO:1903047,GO:1903311,GO:1903312,GO:1903436,GO:1903438,GO:1903490,GO:1903827,GO:1903828,GO:1904779,GO:1904780,GO:1905508,GO:1905516,GO:1905833,GO:1905879,GO:1905881,GO:1905936,GO:1905938,GO:1905939,GO:1905941,GO:1990904,GO:2000026,GO:2000112,GO:2000194,GO:2000196,GO:2000241,GO:2000243,GO:2001252
Exons	7
Evalue	4.05e-145
EggNOG OGs	COG5180@1\|root,KOG2375@2759\|Eukaryota
Ec32 ortholog description	LsmAD domain
Ec32 ortholog	Ec-01_002400.1
EC	2.3.1.199
Description	regulation of cytoplasmic mRNA processing body assembly
Cds size	1920
COG category	A
BRITE	ko00000,ko00001,ko00002,ko01000

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig175.51.6	prot_P-littoralis_Contig175.51.6	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig175 256663..266928 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789843.3818865-UTR-P-littoralis_Contig175:256217..256460	1680789843.3818865-UTR-P-littoralis_Contig175:256217..256460	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig175 256218..256460 -
1680789843.4271314-UTR-P-littoralis_Contig175:256613..256662	1680789843.4271314-UTR-P-littoralis_Contig175:256613..256662	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig175 256614..256662 -
1680789843.495472-UTR-P-littoralis_Contig175:266928..267104	1680789843.495472-UTR-P-littoralis_Contig175:266928..267104	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig175 266929..267104 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789843.436655-CDS-P-littoralis_Contig175:256662..256855	1680789843.436655-CDS-P-littoralis_Contig175:256662..256855	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig175 256663..256855 -
1680789843.4453301-CDS-P-littoralis_Contig175:258551..259261	1680789843.4453301-CDS-P-littoralis_Contig175:258551..259261	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig175 258552..259261 -
1680789843.454359-CDS-P-littoralis_Contig175:259801..259961	1680789843.454359-CDS-P-littoralis_Contig175:259801..259961	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig175 259802..259961 -
1680789843.4636705-CDS-P-littoralis_Contig175:260614..260706	1680789843.4636705-CDS-P-littoralis_Contig175:260614..260706	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig175 260615..260706 -
1680789843.4775257-CDS-P-littoralis_Contig175:261605..261854	1680789843.4775257-CDS-P-littoralis_Contig175:261605..261854	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig175 261606..261854 -
1680789843.4863772-CDS-P-littoralis_Contig175:266412..266928	1680789843.4863772-CDS-P-littoralis_Contig175:266412..266928	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig175 266413..266928 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig175:256218..267104-
coding sequence from alignment at P-littoralis_Contig175:256218..267104-

protein sequence of mRNA_P-littoralis_Contig175.51.6

>prot_P-littoralis_Contig175.51.6 ID=prot_P-littoralis_Contig175.51.6|Name=mRNA_P-littoralis_Contig175.51.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=640bp
MTSVPRPMRSSSSNKNSMGGGSRGGGGGGGFSTSSRDSPRQGSSSTNGGL
NGATPRGSSGGTGAWGSGRPSFSVATKQQQQQHGHNSSSSSSGNQQQQQQ
QQQQQQQQRSSSAVGDGYKLACRDRWMNVTKTMMGERAEITTTSGCVYEG
VFHVLNPAGDDPRPGGRRGMYRVIMRAVTVQGSADQSNGGQSKIDSRGGT
LLLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGGGGGGGNLGVE
RKLQAVDTSWVGSSTNMSISGGGGAGKWDQFAANEKLFNVTSTFDENLYT
TPLNTGTLSREQVAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEE
ERFSGVLGTGGMTSHQRRATGNNSNNNSNNNNHSGGGGGGGHHGQHSNHG
HGHGQHSNHGGGGGGGGSSGGGGSSSGGRDSGPPGPRYATSRGRASPPQS
GAGVGGGGPYGGGGGGGGSGNKSPAGTGVYVPPALRAAGGGGGGGAGTLS
PTPAQMMERGPGAGPGAGARGAAPAGGAAPKAETMPRSDADAAAAAVAAA
GAEARSEEAKEAAKAQLMDVLDGKLSAPMLCPLVKTYRVLGACRRMSRDA
LAFHSRSRPPTLANSILVGMLLLDRPRTLHKTTKRSRER*

mRNA from alignment at P-littoralis_Contig175:256218..267104-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig175.51.6 ID=mRNA_P-littoralis_Contig175.51.6|Name=mRNA_P-littoralis_Contig175.51.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=10887bp|location=Sequence derived from alignment at P-littoralis_Contig175:256218..267104- (Pylaiella littoralis U1_48)
CTTGATGTAAGTGTGCTGTTTGTTCCATGCAACTACGCACACCCTTTGCT
ACAACTCAAAAACTGTTCCCTCCCTATCTAACGCGCGTGGGCCGGCCAGC
CTGATTCTCCCGGGGGGGAGATTCTGATTCCGCGGCTCTCGTGCCCTACC
TCTCTCCCTGCAACCCGAGTCAAGCCATGACATCCGTGCCACGGCCGATG
AGGTCATCATCTTCCAACAAGAACAGCATGGGCGGAGGATCGAGAGGGGG
AGGAGGAGGAGGGGGCTTCTCCACATCCTCTCGAGACTCGCCTCGGCAGG
GCAGCAGCAGCACTAACGGCGGCCTGAACGGCGCAACGCCGCGGGGAAGC
AGTGGAGGTACCGGGGCGTGGGGATCGGGGAGGCCTTCGTTTTCAGTTGC
CACGAAACAGCAGCAGCAGCAGCACGGGCACAACAGCAGCAGCAGCAGCA
GTGGTAATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CGTTCCTCTTCCGCAGTAGGTGACGGGTACAAATTGGCATGTCGCGACAG
ATGGATGAACGTGACCAAGACCATGATGGGGGAGCGCGCGGAGATTACCA
CCACCAGCGGCTGCGTGTACGAGGGGGTGTTTCACGTGCTCAACCCAGCG
GGGGACGACCCCAGACCAGGAGGCAGACGCGGCATGTACCGGGTGCGGTT
TAATCCTTTTATTTTTTTCGCTCTTTTCCCACGCGCTCTCCCAATATATT
ACCCAAGTAGGAGTAGTTTTTTGTACGTGCCCGCCTATGGACTGGTGCAA
GTCCATTCAGAACCTGGTATATATACATGAGCAGCGAGTACTTTGGATGT
CGGTGTGTTTGAACAGGAAGACCTGGCAAAAGTTTTCAAATCAGGATGTA
TTGATTTCAACCAATTGATTAAAGGAACACAGATGTGTCCTGCGATATGT
ATACGAGTATTGTACAGCAGTAGCAATAGTAGACGGGAACTTCCGTAGGC
ACCGCTGCTACTGCTGTTTGTATCATTTGTCCTTTATTTTCCATTCAACG
CTGCTGGTATGTTTTCTGTTCTTTGTGTTACCGCCATTGTTGTGTGTATC
AGAATACCTCTCGAAATGCATGTTGGATTTTCCTCGAAAAAGCGCATGTT
CCTATTTCCCACGTACTTATGAGTACATATGATGAGATACCGCCCCCTTC
ATTATTGCTAATAACACTTGGAACAGAATACACGCTCGAAGGATCCCATT
CCGGGAACGGGCCGGCCTAGTTGGCGTTACGGTTCATACTTTGCATCTTT
TCATGGTTTGTGAAATGGGACGATAAAATTGTCGTGACGGTCCACCTGTG
TCAAAAGGTTTTCAACTTTCCCATGAGGGAACAGAAAAAGCATCCCCGGG
TCGAAGAAGTGATCAATTCCGAAAAAATCAGGAGATCTTGGGAGTGTGCG
TGTGTGTATTGTCATCCCTTTAATTGGACGCCACTCTACACCTTTCGGGT
AGGTAGGCGCCCCAACCGGGGTCACACAGTAAGAAGTCGTCACAGGATGT
TTTCTTTGATTTATTTTGTTTTCTTTCTCCACTTCCCACTGCGGTACCTG
CCTACAGTTTTTCTCGCGAGAAAGGGTACAACCACCCCTTTCCCTCGTCG
ACACTTCGAATTTTGTTTACTCACGAATTTATCGTTTTCCACCCTCACGC
ATGACATGAGAAGAATTCCGGATCGTGTCACTGCACCGGGATTCGAACTC
AAGCGCAAGTGTCAGAAAATTTCGAAAATAATCAACTGAACCACCGGGGC
GACCGTTTTTTTTTTGAGTGAAGGTGTGAAATCGTCTTTGACCTCACGGG
GGATTTGTTCACGTCCCCCGGGGTAACAGCTACGGCGGTATGGACATGTT
TTTGGCATACATACGCCAGAAAGCGACACCGCCTTCCCGCGCCATAAAGC
GGTGCAAGATACACCTTGGCGTTTGAGTCCTTTTCGCGTCGCCGATTGGC
CAATCAAGCCCTGTACCGCTTACGGGCGTCAGACTGCTGTGGCGGTTTAC
CGCTCCCTGCTTTCTCAGTTGGATTTGTGACGTTTTTTGGCAAACGTTGT
ACCGACTTCTGGCGCGGGTCTGGCGGGGCCACAGCACCCCCAGCGGAGTA
CTTTTTTTTTTTTTCCAACTATCCGAGACCGTTCGCACCGAAAAAAATAA
CTTGGAAGAAATTTCGAGAAGGGACGAGAAGTTTTACTCCACAACCAACG
CAGCCTTCCTTGTGTGACATGACAACTTTTTATGTCCATGGAACAAACCA
CAAAAAAATACGATGGCGCGTCTCCACGCCATCCACGAGGCGTCTCATAC
CACACGGAACGTGGAAGGCGCTGTCTCGATATAAGTAAACCACCACCACC
TTTATTTATTTTACTATGCTTTACAGAGGTAGGCACATGGTGTGGGCACA
TCGTGACGCGACGTGATGAGAGGCATACCTGCTGTATCACATGGACCCTC
TTTTACTTGTACCTGTGGTACAAAGCAGCTGTCAGCGACGCCAAAACAAG
TCCCGCCTTGTTTTCATGCGTGAGGAAGAGGGCGACCCCCGCTCGAAGGT
ACAAGCATATCTTATTGCTGGCTGCGGAGTACCGTGTATGTATCATATCA
TACACTCCGTAATACGTGCATCGTATCATATCATCATACAATGATGTGTT
CACGCTCGGTGTCTCAGCGGCCTGTGTATGGGTGTGGGTGTGTATCATGC
GTGCTTGCCGGTCCACGACCGCGTGCTTTCTGTTGCTCCTTGGGAGGGTG
ACTGATACGCTCGCCTGTGTGTGGACGTGCGTGGGCGCCGGAAGTCGCAA
GACATCCACCGCCGTCGTACACGCACGTACTTGATGACGCGGTCTTATAT
ACGAACCGACAATCATCGTTGCAGCATGTGTTATGTGTTTTTGTCATCCC
GTTTGTTCTGGGAACGCCAGTCTCAGATACAACTTTCGTCGTATATATCT
ATGCGGGCGGGTACATCACCCACGGTAACGAACACAGGAGGAGGAACGTG
AGTCTGCACACAGGTAGTTTTTTTTGTTCACTGCTGTTCGACTTCCAGCT
GCTCCTTTTTTGCGGTGCTTGCCTCAAAATTTTTCTTTCTCGAGAAAGAG
GGTTCGGCCGTCCCTTGCTGCTGTACCCTCGTCGCCTCTCGAAAAGTTGA
ACTTGTTTTTTTTCACGATGTAAAAGTAGCTGCCTTTTGATTTCAGGCCA
CCCTGGATTTTGTAAAAGAAAAAGGGGAGGTTTTTCGCAAAAAGAGAGTA
TCGCACAATAAACACAACATGTGGGTGTGTGTATGTGGTGTGTTTGTGTG
TGTGTTTTGCCATCCCATCTATTCTGGACGCCAGTATACACCGAAAGGTA
TAATAATGTATGAAGACGCACCAGCCGGGGTCATGACAGACAGGAGGAAG
ATCAGCACAGGAAAAATACTTGCATACGAAGTATACATGTATTTTTTCCT
TCGCCTTCCTTCTTCTCTGCTTGCCTCACTTTGTCATCACTGCGATAATA
CTGTATAATATTATGTGCCTCGAAGTAGGTGGTTCGGTCGGGCACCCGCT
TTTTTTGCCCTCGTTGGCGTTTTTTTTCTAGTCGCATCTTGCATGCATGC
ATCCATGCATGTGCACGAGACAGTCGCTTTTTCACGCGTAAACGTTTGGG
GGTGGAAGAACTCCCTGGCCGTGATCCGAACTCACGAACCTCGGCAGCAG
AATTACAGAAGTACGACGGCACCCACTGAAACAGCTTTATTCGAGGGGGC
CAAAATATCACCATGATAGACAACCTTTTTTCAGTAAGTAAAAGGGGCCT
ACTCGAAAGTTGCTACACTAGCACTTGTGCTCTCCTCAGGCTAAGGCTAC
AGGCTTGAACGGAGAAGGGTGGGATGGAGCGTAGGTACGGTACGGCAGTC
AGGGAGGGGGGCACCGCCAAGAACTATTTTAACCTGGAAGTTTGATACGT
TGGGAAAAGCTTTCATCATATCATAACCTTATGACAAAAATGTCATATCA
CGTCGCCCCGGGATACCGGGAACGGCTCCCGCCCAGCGTTGCCATGAAGC
TCTGAGTGCTGCAATACCTGTGTTAACTGAATGCAGCAGTATTTCCGTCT
ATAGGTACATCAGAGTGTTTCACTTCGAATCGCTTGAGAGTTTATATATT
TTTTCAAAATCTCGGAGGTATTTGGTAAATGGTACGCTTGTCCCGTTCAC
GGTGTGAAGCGAGGTGCTCGATAAATTATAGAGTTCGACTCGAAAAAAGT
GAAATAACAAAGTAAAAAAAAAGAGAAAAAAAACATAACGCCGAGGGAGA
GAGACGGTCGAACCCCATCTTCTCGGGATGAAAATTTGAGGCATGCTTGC
ACCGCAGGAGAAAAAGGTGGAGGAGGATTTTTTTTTCTCAAGTTTTGTGA
TGTTGACGTTCCTCCTTGGGTATGACCGACCCGGTCGATGCGGCCCCGAC
CTGTACCGGAAAAGACGGAAGACTATGACAGCGTCCAGAATAGAGGGCAT
GACAACACGCGCACGTACACGAAGACTAGGGTCCAGGATAGATGGGATGG
GATGACAACGCACACACAAAGACTAGGCTCCAGGATAGATGGGATGGGAT
GACAACACACATTCACAAGAAGACTAGCGTCCAGAATAGATGGGATGACA
ACACACACGCGCGCGAAGTGCCATTTGACCTACAGACGGCAGCGCCATGA
TACCTGCTGTTGCTGCACCACGCATCCAATGTCACATCAGTGCACACCCA
GCCACGTCCCGCCGTCATCCGCTTTGCCGTGCTGCTTGAGCTACAGCTAC
AGCGGCAGGACTGTAGCCTGCCGGAGGCCCACGGCAATACATCGTGAGAA
TTTTTGCATGCCGTATGATCACGGTGCAACCCCCGTGATCCGATGGCATG
CGACAACTCTTGCAACGAATTCACGTGGATTGAGACAGGATACAGTACTG
CTGTAGTGTTGTGGATGTCCCCGGCAAGCTACTGCTGTATTTCTTTCTCA
ACCGCCAACACACGCAGATGACACAATACACACAATGTTCACACAACCAT
AACACCAGATATGCGAAAAATCGCTTTTACCCCCCTCACCTCTTCCTCCT
CTCCCTCCTCTTTCTCCTCCGCCTCCTCTTTGTCCTCGAATTCGACCCCC
CCCGCCGCCGCCGCCGCCGCCGCCGCTGCCGCCGCCGCTGCTCCTCACAG
GTGATCATGCGCGCCGTGACGGTACAAGGTAGCGCCGACCAATCCAACGG
CGGGCAGTCGAAGATCGACAGCCGGGGGGGCACGTTGCTCTTGTCAGGCG
ACGACATCGTTTCGATTGCCGTCAAGCGGTTCCCCATGCAGCACTCGGCG
CAGAGGCCCAAAGGGCTAGGAACGGACTCGGACATCGGAGGGCGGGCGGG
GGGCGGCGGCGGAGGCGGGAATCTGGGGGTGGAGAGAAAGCTCCAGGCGG
TAAGCGAGATCGCGGGATGTTTGTTTGCCCGCTTGCGGGATGTTTGCTTG
CCCGCCGCATGCGGGATTTATGTTCGCCCGCGGTATCGATTTTGAAAAAA
AAAATGGGAACGCGAGTCGATCGGCAGCTGCACTATCTGCCCCATCTGTG
ATACGATACATACGAAGTATTTAAGGATACGGCCCTTGTATTCCAGGAAG
CGCTGTTGTACGATATCATAATATGCCTTTTATCTCCAACCAGCTATCAA
AATGTTTGGCAGCAGCACGACCAGCACAAGAGGAAAAGTGCTCCAGGCGC
GGTAAAAGCTCCTACATAGGTAGGCGTATCTGGACGGATTAGACAAGAGG
TAAACATGCTTTTGTCGAAACACTGGGAGCGGTGAGATACACGGAGTATT
ATGGAAGCAGCACATGCAGCAGTCGCAGTCAGTCAAGTCAGTCAAGTCCG
TCAGTCAGTCAGCCAGTCAGCCAGTCAGCTAGTCAGTTGGTACCATCCCT
CTCACAACCCTGTTTATGTATGACGCAGCAGGGCCGGCGATTGAAATGTG
TTCTTTTTATTGCTTCGATTGTCACGCGAAGGTCGACAGGACAGCAGGTA
TCGCATCACATCATATATCATAGCCTGCTTGTATTTTTTTGTTGTTGGTC
GGGTGTGCGGCGCCTGGTGTAGGTGTACTGGTGGCATGCCGCAGTACGTC
TGACGGCAGGCACCAGCCTTTCGACCCCGGCGGGAGCGGCGAGTCTCTCC
CCTCCGCCCCTGCCTTTCGCAGACACGGCAGCATTCACGCCACGTCTACT
TTTTTTTGTCCGCCATGCGCCTCTCACCCTTCCGCTCCGTTCCCCCCCCC
CGTCGCCCCCTTAATCGCGCCCCTCTGCCGATGGTTTGACAAACAAAGGT
GGACACCTCGTGGGTCGGGAGTTCCACCAACATGTCGATTTCTGGAGGAG
GCGGTGCCGGAAAGTGGGACCAGTTCGCGGCGAACGAAAAGTGCGTACAG
TACGTACAGCAGTGCAAAGAAATATTTTCCAGATGAGACTCTTTTTTAGT
CGTCTTCTGTTGGACTCTGCTGGAGTTTTGTACAGCGGGGGAAAGGGAAA
GGGTGTTCTCAATCGGCTTTTCTCTTGCCGCCGTGTTCTGAACACGCTTC
TGATGCCCAGCCGCAGGCAGCAGCAGCAGCAGCAGCAAGAGTGCCAGTAG
CAGTAGCAGTACTTCGATCGTGTGGCGTTCTTCCTTGATGCTTTTGTTGC
GGAGCAGCATTGCAGCTGAACAAGTAGTCGCGATGCTGTGCTTTTAGGTT
GGTGGGATACGCACAAAGTAGTGCCGTCCTGCTACTGCTGCAGGTATGCC
GGCATCGCGTGCGAAGCAACGCGTTTCAACCCCAAAGGCTACAGCAGCAG
CAGCAGGGGGGGCATTGCAGAAAATCAACGCTTCGACCGAGCTGCCGGGT
ATAAACATGTATACACCCCCCCCGGTGTATATGCCCAATAAGGCGAAACT
CCGTCATGATTTGTTTTGCCGCGCCCCCCCCCGACCCGCCGCCGCTGCCG
CCGCCGCCCATCTTGTCGTAGCCTCCTCCTTGTTGACCCCCCCCCCCCCC
CCTACCCCAATTTCCACCCCACGTACCATCCCTTTGCTTGCAGGTTGTTC
AACGTAACAAGCACTTTCGACGAAAATCTGTACACGACGCCGCTCAACAC
GGGGACGTTGTCGAGGGAACAGGTGGCGCACGCCGAGCGCATGGCCGCCG
AGATCGAGGGGAAAACCAGCAGCAATATTCACATGCGCGAAGAGCGCAAC
ATGGTGAGAGATCGCGTTTAAAGCTGGAGAGGGAAGGGAGAGAGAGAGAG
AGAGACCAGCAGTTTATGAGCACATTTCTGAGAGAGGAATCGACGGGGGG
GTTTTCTATTTTTTTTGTTCAGTCGGAAGCGATGCGCGCGCCTTGTGCGC
TTTGGCGTTGTCTGCCGCGGGCGTTGTCGTCTTTCGTGGCCGGGGTGGGT
GGGATGGACGGGAAAAAACGCTGGGAAGAGATTGAAATCGTTGTGTAGCC
TCGCTCTGAATGAAAACTTAGGGTCGGATGTTTTCAACCTTATCCCGCCG
GGGCACCTTATCCTGCTGCCTCCCTGTACTCGTCATGCCTCGACATGTAG
ATTGTAGTCCGCTCGCTTGATTGGATGCCGTCCCCATATTTTTTGTCGAG
ATCGAGCGCGGAGCCGAGCGCGCCCCCCCCCCCTGCTGAATTTTGAAACC
AACACCGAAATGTGTCATCACTTCCCCGCCCCGCACGTTCCTTTTCCTTC
CTTTCCTTTCCTTCCCTCCTTTCTTCCTCGCCGTCCCGTGAAGCTAACGG
AGCAAGACAAAGCGATGGGAGAAGAGGAGCGTTTCAGCGGCGTCCTCGGA
ACTGGAGGCATGACCTCCCACCAAAGACGGGCCACCGGTAACAACAGTAA
CAATAACAGCAACAACAACAACCACAGCGGCGGTGGCGGCGGCGGTGGAC
ACCACGGGCAACACAGCAACCACGGCCACGGCCACGGCCAGCACAGCAAC
CACGGTGGTGGTGGTGGTGGTGGTGGTAGTAGTGGTGGCGGCGGCAGCAG
CAGCGGCGGCCGAGATTCCGGGCCTCCCGGCCCCCGGTATGCAACCTCTC
GGGGCCGTGCCTCCCCCCCGCAGTCGGGCGCGGGGGTCGGCGGTGGTGGG
CCCTACGGCGGCGGCGGCGGCGGAGGTGGTAGCGGGAACAAGAGCCCGGC
CGGTACTGGTGTATACGTACCCCCGGCCCTTCGGGCCGCAGGCGGAGGTG
GAGGTGGAGGAGCGGGAACTTTGTCTCCGACACCGGCGCAGATGATGGAG
CGAGGACCGGGGGCGGGGCCGGGGGCGGGGGCCCGCGGTGCGGCGCCGGC
AGGGGGGGCGGCTCCCAAAGCCGAGACGATGCCACGCTCGGACGCGGACG
CGGCCGCGGCCGCCGTGGCGGCGGCTGGGGCGGAGGCGAGGTCGGAGGAG
GCGAAGGAAGCCGCCAAGGCGCAGCTGATGGATGTGCTCGATGGGAAGCT
CAGGTGCGATCTCGGCGAGGGAATTGGGAGCATGAGTAGAGACGGTGGCG
GATAGTGTGTGCGGGGAGATGCATTTTGCATTGCACTGCGTTGGGCCCGT
TATAATGTGCAAATGGTGCTGGACCGCTTTGTCGCTTGGACTTTTGTGTT
CTTAGCAGTAGAGTTCGCGGCAGTAGAACAGCCGAACCAGGGGCGGTAAA
AGTTCTGAAATTGGTTACTCGTGTTGCTTCCAGACGGGTCTGCCGCGGAA
TAGATTGGGAGAGGAGGCGAGATCTGTTTGATCGCGATCTTATGCCCGCA
TTGTTATGGGGTCGTGGGTATGGACAGTGCACGACAATTTCTCATATTTC
GTTTTGTTTTCGTCTTGACTTTTGAATGTAAAAAACGGTCTGAAACGTAC
ATACCAGCGACATTTTGATCGTTAGGAAAATACGAAGACACCGCAATCGA
AAAGAAAAAAAAACAAAAGGTCCCGGTCAAATTTGAAGTCTCTTAAGATG
TAGCGCGTAAAACATTTGCTCCGTGAACGAAAATAGGCTGAAAATCCCAA
AAAACCGAGATGTGTCGTGTTCGCACAAAAAAAAAATCAGGTGAGTATCG
AGATGAGAGAAAGCGTTGGCCGCAACTTGTTTAACAACCAACAGGTTGGT
TATCCTGTGAAGAAGGCGAGCAAAAGAACGCTGCAGCTTTTTTGGTGTTC
CCTCAGCATGATATCGATTGATTTTTTTCTTTTTCTGGAATAATAAACAC
AAAACGAAAAAATCGTGTGCTATTGACAAGATCTCACGTGATTTGCCGCA
CTCTTTTTAAACATCGGCAGGTTGGTTATCGCGAAAAAAACAAAACAGCT
GCGAGAATTTCCAAGATTTTTCTTTCTTACTAAATACGAAGAAACCAGAA
GAAAAAAAAATTGACAGATTTCTCTGCCCAAAACAGTTTGGGGGACACAC
TTGGGACACCTTTTGTCCCCCAACGTTTGTTGTCTCGGGTTTTCGTGCCG
AGTTTACAGCGCATACAGCAGTAGACCGTTCTATTTCGTTAAGTAGTACC
AGGTATCAAGTATCCCCCCCAGAGTTTTTGGGGACCTTTCGACACGGTTT
GAAGAGTTCGAGTCGTGGTGCGGGACTGTGTGCGAGATCTAGCCATACAG
CAGTGCAGTACAGTAGTTGAAGAGCTGGATCTTGGTGCGGGACTGTGGAC
GAGCTCCGAGATCCGATCATACAGCAGTTGTTGAAGAATTGGAGCCGTGG
TGCGGGACTACTGTGAATATGGGATCCAATTACACAGCAGTAGTGGAGGA
GTTGGAAGTCGTGGCGCGGGGTTGTGCGCACGAGATCCAGTCATGCAGCA
GCAGTAGAAGCCGGGGTTGTTTTGTGGGGGGTCGTAACGGGGTTGGCGGT
GTGTTTTGTAGATTCCGAAACAACCACGCAACCACGCATCACACGCACCG
ACAAAATTCTACCTGCAAGATATGACATGGCGTGTGTTGTGTGACAAAGA
AAATGGTAGATTTGTAGATTTGTCTTGCACGGACCACACATCGGGATGGA
GTGCAGGTGAGCTGCGCCTGTCGTATCTTGAGCACGACTTGTGCGGATAT
TCGGCGCTGTGGCGGGGCTGTGGTGTTGATCACGGCCTGTGAACCCTAAC
CCTCCAGACCAACGCCCCCCCCCCCCCCCCCCCCCCCGCACGCACATAGC
GCACCTATGCTGTGCCCCCTTGTGAAGACGTACCGTGTCCTCGGTGCCTG
CCGGAGAATGTCGAGGGATGCGCTGGCTTTTCATTCGCGGAGCCGCCCAC
CCACACTCGCAAACAGCATCTTGGTTGGCATGTTACTCTTAGATCGTCCG
CGTACGTTACACAAGACAACAAAGCGCAGCAGAGAAAGGTGACGAACAGG
ACAGCAGGAGGTATATCGAGAGGGGAACGCAGGTCCGACCCGTGTTGCAT
CAGCGGTCTGATGACGGCGTCGGTGTGGGACTCGCATATATAGCCGCAAA
GTCGGGGATGCTGTTTGATACATGAAGATACTTTGCTTCCCCCCCCCCCC
CCGTGTTAAATTGTACAACAATACTGCTGTGCGTTGAAAGTCAGGGCTGC
TGTCACGGAGATGCGCCCTCAGTGTTCCAAGAGCTCTCGTTGCCGCCAAA
TATGTATTTCCTCTTTGCTCCTCTCATGTCTGGTGCCGTTTCTGTTGTCC
GTGCTTTTTTTTATACGTCTGCTCCCGCTTTTTTCTCGATCGTTTTTATC
GTTTCAGGTCGACGCCTCCCCCGAAGGGCGAAAATGGTCCGACTGCGGTC
GCTGCCGCTGCCGCTGCCGCTGCCGCTGCCGTCGCCA

Coding sequence (CDS) from alignment at P-littoralis_Contig175:256218..267104-

>mRNA_P-littoralis_Contig175.51.6 ID=mRNA_P-littoralis_Contig175.51.6|Name=mRNA_P-littoralis_Contig175.51.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1920bp|location=Sequence derived from alignment at P-littoralis_Contig175:256218..267104- (Pylaiella littoralis U1_48)
ATGACATCCGTGCCACGGCCGATGAGGTCATCATCTTCCAACAAGAACAG
CATGGGCGGAGGATCGAGAGGGGGAGGAGGAGGAGGGGGCTTCTCCACAT
CCTCTCGAGACTCGCCTCGGCAGGGCAGCAGCAGCACTAACGGCGGCCTG
AACGGCGCAACGCCGCGGGGAAGCAGTGGAGGTACCGGGGCGTGGGGATC
GGGGAGGCCTTCGTTTTCAGTTGCCACGAAACAGCAGCAGCAGCAGCACG
GGCACAACAGCAGCAGCAGCAGCAGTGGTAATCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCGTTCCTCTTCCGCAGTAGGTGACGG
GTACAAATTGGCATGTCGCGACAGATGGATGAACGTGACCAAGACCATGA
TGGGGGAGCGCGCGGAGATTACCACCACCAGCGGCTGCGTGTACGAGGGG
GTGTTTCACGTGCTCAACCCAGCGGGGGACGACCCCAGACCAGGAGGCAG
ACGCGGCATGTACCGGGTGATCATGCGCGCCGTGACGGTACAAGGTAGCG
CCGACCAATCCAACGGCGGGCAGTCGAAGATCGACAGCCGGGGGGGCACG
TTGCTCTTGTCAGGCGACGACATCGTTTCGATTGCCGTCAAGCGGTTCCC
CATGCAGCACTCGGCGCAGAGGCCCAAAGGGCTAGGAACGGACTCGGACA
TCGGAGGGCGGGCGGGGGGCGGCGGCGGAGGCGGGAATCTGGGGGTGGAG
AGAAAGCTCCAGGCGGTGGACACCTCGTGGGTCGGGAGTTCCACCAACAT
GTCGATTTCTGGAGGAGGCGGTGCCGGAAAGTGGGACCAGTTCGCGGCGA
ACGAAAAGTTGTTCAACGTAACAAGCACTTTCGACGAAAATCTGTACACG
ACGCCGCTCAACACGGGGACGTTGTCGAGGGAACAGGTGGCGCACGCCGA
GCGCATGGCCGCCGAGATCGAGGGGAAAACCAGCAGCAATATTCACATGC
GCGAAGAGCGCAACATGCTAACGGAGCAAGACAAAGCGATGGGAGAAGAG
GAGCGTTTCAGCGGCGTCCTCGGAACTGGAGGCATGACCTCCCACCAAAG
ACGGGCCACCGGTAACAACAGTAACAATAACAGCAACAACAACAACCACA
GCGGCGGTGGCGGCGGCGGTGGACACCACGGGCAACACAGCAACCACGGC
CACGGCCACGGCCAGCACAGCAACCACGGTGGTGGTGGTGGTGGTGGTGG
TAGTAGTGGTGGCGGCGGCAGCAGCAGCGGCGGCCGAGATTCCGGGCCTC
CCGGCCCCCGGTATGCAACCTCTCGGGGCCGTGCCTCCCCCCCGCAGTCG
GGCGCGGGGGTCGGCGGTGGTGGGCCCTACGGCGGCGGCGGCGGCGGAGG
TGGTAGCGGGAACAAGAGCCCGGCCGGTACTGGTGTATACGTACCCCCGG
CCCTTCGGGCCGCAGGCGGAGGTGGAGGTGGAGGAGCGGGAACTTTGTCT
CCGACACCGGCGCAGATGATGGAGCGAGGACCGGGGGCGGGGCCGGGGGC
GGGGGCCCGCGGTGCGGCGCCGGCAGGGGGGGCGGCTCCCAAAGCCGAGA
CGATGCCACGCTCGGACGCGGACGCGGCCGCGGCCGCCGTGGCGGCGGCT
GGGGCGGAGGCGAGGTCGGAGGAGGCGAAGGAAGCCGCCAAGGCGCAGCT
GATGGATGTGCTCGATGGGAAGCTCAGCGCACCTATGCTGTGCCCCCTTG
TGAAGACGTACCGTGTCCTCGGTGCCTGCCGGAGAATGTCGAGGGATGCG
CTGGCTTTTCATTCGCGGAGCCGCCCACCCACACTCGCAAACAGCATCTT
GGTTGGCATGTTACTCTTAGATCGTCCGCGTACGTTACACAAGACAACAA
AGCGCAGCAGAGAAAGGTGA