mRNA_P-littoralis_Contig175.42.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: A0A6H5L721_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L721_9PHAE) HSP 1 Score: 501 bits (1290), Expect = 6.770e-170 Identity = 266/383 (69.45%), Postives = 305/383 (79.63%), Query Frame = 1
Query: 88 MGNPKAAKNKRPPPLPPSKLAPWFPAGAALGVAVVLALLAKAFAPPVHFLSTYNRNQMKDVFLGKGAWAVLCSGEGAAYDAVFKRFGTASKAMKGMTKFGVVDCTGSLPSGKSILQKFELSEEVSPVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKELMARYRNLKFVSVDSTKLETGIEKKQGVK-VDGSHRLVHFTRYNVTGKAKVGTPRWGMQVYDGSLDADSMSIFIESAAVGSPKDKTPLTRIPTVMTRKEPKVKAPPPAPKPRADAADKAGAXXXXXGGTEAGGGAYDGLT----LEEAKRRQALLEAARRRAMDKEADNFLFESVDEDDQEG 1221
M NPKAAK S+LAPW+PA A+GVAV LA LAKA APP+HFLSTYNRNQMKDVFLGKG W VLCSGEGA YDAV+KRFGTASKAM G KFGVVDC GSLPSGKSILQKF+LSEEV PVLFVTGAG+TP QAS+RNMETH+S+LKWVQV +TPGASPV STRE+ESKC+KKE+CAL+MKAGPLED KDAFK+LM +RNLKFVS+DSTKLET +EKK G+K VDGSH+LVHFTRYNVTGK KVGTPRWG+QVY G+L+ SMS+FIE AA+ K+KT LTR+PTVMTRKEPK K P + ++ GA GG G Y+G+ LE +++QA E ARR+ MD+EADNFLFE+VDE DQEG
Sbjct: 1 MANPKAAKXXXXXXXXXSRLAPWYPAVVAMGVAVALAFLAKALAPPIHFLSTYNRNQMKDVFLGKGMWVVLCSGEGAGYDAVYKRFGTASKAMTGSAKFGVVDCAGSLPSGKSILQKFDLSEEVKPVLFVTGAGLTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESKCLKKERCALVMKAGPLEDDVKDAFKDLMGNHRNLKFVSIDSTKLETSLEKKLGIKPVDGSHQLVHFTRYNVTGKVKVGTPRWGVQVYSGALETASMSVFIEGAAIAGTKEKTALTRLPTVMTRKEPKAK--PXXXXXXXEGGEERGASAEGLGGA----GKYEGMDKEKLLEAFRKKQAEREVARRKEMDEEADNFLFEAVDEGDQEG 377
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: D8LFH7_ECTSI (NIMA-like PK similar to Serine/threonine-protein kinase Nek1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH7_ECTSI) HSP 1 Score: 252 bits (644), Expect = 2.650e-71 Identity = 136/240 (56.67%), Postives = 168/240 (70.00%), Query Frame = 1
Query: 289 WAVLCSGEGAAYDAVFKRFGTASKAMKGMTKFGVVDCTGSLPSGKSILQKFELSEEVS-PVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKELMARYRNLKFVSVDSTKLETGIEKKQGVK-VDGSHRLVHFTRYNVTGKAKVGTPRWGMQVYDGSLDADSMSIFIESAAVGSPKDKTPLTRIPTVMTRKEPKVKAP 1002
W VLC +G Y++ + RF TAS+ + KFGVVDC GSLPSGKSI+QKF L+ ++ P+LFV GA M PVQAS NM++ +S++KW + TP ASPV STR +E+KCMKKEQC LIM AG LE A KE+MAR+R ++FVS+D+TKLET IEK+ +K VDG+H VHFTRYNV AK GTPRWG+QVY G LD DSMS F+ G ++K L PTV TRK K K P
Sbjct: 363 WVVLCKKKGPDYNSAYGRFETASRTLTESVKFGVVDCFGSLPSGKSIIQKFGLTNRLNTPILFVAGAEMKPVQASPWNMDSEASLVKWASIAITPAASPVTSTRSLETKCMKKEQCVLIMLAGQLESADDYALKEVMARHRKVRFVSMDATKLETSIEKRFDIKPVDGAHHFVHFTRYNVPVNAKAGTPRWGVQVYRGKLDTDSMSAFL-----GGNEEKQGLRHAPTVSTRKATKKKRP 597
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: A0A835ZG14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG14_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.040e-30 Identity = 97/295 (32.88%), Postives = 145/295 (49.15%), Query Frame = 1
Query: 145 LAPWFPAGAALGVAVVLALLAKAFAPPVHFLSTYNRNQMKDVFLGKGAWAVLCSGEGAAYDAVFKRFGTASKAMKGMTKFGVVDCTGSLPSGKSILQKFELSEEVSPVLFVTGAGM-TPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGP----LEDQPKDAFKELMARYRNLKFVSVDSTKLETGIEKKQG---VKVDGSHRLVHFTRYNVTGKAKVGTP---------RWGMQVYDGSLDADSMSIFIESAAVGSPKDKTPLTRIPTVMTR 978
L PW A A + A A + + + P+H+LS N +QM+ VFLG W VLC AA A+F TA FGV+DC G+LPSGK++L+KF + V+P +F G T QA AR + + + KWV+ T P + V +++++ +C+ K++C L++KA + K+ + M R+R L+F + D+ K E +E K G G+H ++F NVT A GT RW + VY L + ++ A TPLTR T R
Sbjct: 8 LEPWLKAMAVISAAFAAAYILRGVSQPLHYLSARNVDQMRAVFLGNETWVVLCHAGAAAVPALFDA--TARAPPSPGVAFGVLDCGGTLPSGKTVLEKFGIDVGVAPTVFAALPGARTTRQAPARALASRAHFAKWVRDTVEPHSFAVATSKDLLERCLVKDECCLVLKAAGGGEGMGGAEKEGVRAAMYRHRGLRFAAADAAKHELSLEAKLGFGDALEAGNHVALYFR--NVTAAAAEGTKDGRPPKGATRWLLGVYKDDLGG--LGDWLAGMAEAPAAALTPLTRAATARKR 296
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: B8BY76_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY76_THAPS) HSP 1 Score: 102 bits (254), Expect = 1.840e-19 Identity = 87/286 (30.42%), Postives = 145/286 (50.70%), Query Frame = 1
Query: 181 VAVVLALLA----KAFAPPVHFLSTYNRNQMKDVFLGKGA----WAVLCSGE---GAAYDAVFKRFGTASKAMKGMTKFGVVDCTGSLP-SGKSILQKFELSEEVSPVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKELMARYRNLKFVSVDSTKLE-TGIEKKQGVKVDGSHRLVHFTRYNVTGKAKVG---TPRWG-MQVYDGSLDADSMSIFIESAAVGSP---KDKTPLTRIPTVMTR 978
V + LA++A K + + + +++VF G+GA +AVLC E G+ V F +S ++ ++DC LP SGKSI KF+L+++ P +FV+G P Q ++++T + + K ++ P A+ ++ T+E++ KC+ K+ CAL++K G E K A L+ +Y N++F SVDS+ L +E+ V G HR V F + V+G G T G ++ LDAD +S A VG K+ + +P++ TR
Sbjct: 23 VGIALAMMAYYFMKGMGNEIPRIDVTDSLALREVFFGEGASGKDYAVLCHPEAKDGSVGIPVSSVFQDSSDDGSAPAEYVLMDCDYVLPDSGKSIYDKFKLNKKKRPTVFVSGKVGPPKQVPEKHLKTGAMLTKLLKQMLEPHAAKIEKTKELKEKCLNKDVCALLLKGGKPEPYVKHAMANLLGKYPNVQFASVDSSVLFLVNLEEHLPEYVSGEHRFVVFKK--VSGGLSAGDNDTKAEGRLKTSILPLDADGVSFSSMDALVGDAVKGKNLKKIATLPSIKTR 306
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: A0A7S4IA24_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IA24_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.820e-13 Identity = 79/300 (26.33%), Postives = 142/300 (47.33%), Query Frame = 1
Query: 181 VAVVLALLA----KAFAPPVHFLSTYNRNQMKDVFLGKG---AWAVLC-------SGEGAAYDAVFKRFGTASKAMKGMTKFGVVDCTGSLP-SGKSILQKFELSEEVSPVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKELMARYRNLKFVSVDST-KLETGIEKKQGVKVDGSHRLVHFTRYN----VTGK----------AKVGTPRWGMQV----YDGSLDADSMSIFIESAAVGSPKDKTPLTRIPTVMTR 978
+ V LAL+ K A + + + +++VF G+G ++AVLC S + +VF+ A F ++DC LP SGK++ ++F + + P +F++G P Q ++++T + K ++ P A +++T+++++KC+ ++ C L++K G E KDA L+ +Y ++ F SVDST L + +E+ G HR V F + + + GK K T R + YD SL S++ I++A K + +PT+ TR
Sbjct: 25 IGVALALMGWQYMKGAANEIVRIDPTDELALREVFFGEGPGKSYAVLCHTPSADPSKKSLPISSVFQDAAD-EYASTNRADFVLMDCNYELPESGKTVAERFGIDLKKRPSIFLSGKVGPPKQVPLKHLKTGHMLTKLLKGMLEPHAQKIENTKDLKAKCLNRDMCGLLLKGGKPEPYVKDAVSNLLNKYPDVTFASVDSTLMLLSNLEEYLPEYKAGKHRFVLFKKVSGGLDIAGKDENETEGEADKKKDTGRLVTSIQPLQYD-SLSFGSINTLIQNAINTKGKSMRKIPALPTIKTR 322
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: A0A7R9W5H2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5H2_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.030e-12 Identity = 70/255 (27.45%), Postives = 126/255 (49.41%), Query Frame = 1
Query: 100 KAAKNKRPPPLPPSKLAPWFPAGAALGVAVVLALLA----KAFAPPVHFLSTYNRNQMKDVFLGKG----AWAVLC-------SGEGAAYDAVFKRFGTASKAMKGMTKFGVVDCTGSLP-SGKSILQKFELSEEVSPVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKELMARYRNLKFVSVDST-KLETGIEKKQGVKVDGSHRLVHFTR 813
K +K +PP L KL PA + V LAL+ K A + + + +++VF G+G ++AVLC S + +VF+ A F ++DC LP SGK++ ++F + + P +FV+G P Q ++++T + K ++ P A +++T+++++KC+ ++ C +++K G E KDA L+ +Y ++ F SVDST + + +E+ G HR V F +
Sbjct: 14 KTSKGAKPPAL--DKL--LMPA-----IGVALALMGWQFMKGVANEIVRIDVTDELALREVFFGEGPAGKSYAVLCHTPPSDPSKKALPVSSVFQDAAD-EYASTNRADFVLLDCNHVLPESGKTVAERFGIDLKKRPSIFVSGKVGPPKQVPLKHLKTGHMLTKLLKGMLEPHAQKIETTKDLKAKCLNRDMCGVLLKGGKPEPYVKDAVSNLLDKYPDMTFASVDSTLMIMSNLEEYLPEYRAGKHRFVLFKK 258
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: L1JA46_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JA46_GUITC) HSP 1 Score: 76.3 bits (186), Expect = 7.500e-11 Identity = 66/260 (25.38%), Postives = 121/260 (46.54%), Query Frame = 1
Query: 226 VHFLSTYNRNQMKDVFLGKGAWAVLCSGEGAAYDAVFKRFGTASKAM-KGMTKFGVVDCTGSLPSGKSILQKFELSEEV-SPVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKELMARYRNLKFVSVDSTKLETGIEKKQGVKVDGSHRLVHFTRYNVTGKAKVGTPRW--GMQVYDGSLDADSMSIFIESAAVGSPKDKTPLTRIPTVMTRKEPKV 993
+ + T + + +VFL + V C+G + + K F AS + + +DC G+LPSGK+++++F +++ P+ F+ P + R+ T V+++ T+ S + + ++ +C++++QCAL++ G Q + L ++R + FV VDS KL+ +E V +G RLV+ N GK K + G G +S+ FI+ KT L ++ +K PKV
Sbjct: 109 IQTIETDDAAMVHEVFLSGNPYFVQCAGP---LEPLHKTFVDASAGLVESSITPAAMDCNGTLPSGKTVVERFFKGKKLHDPLFFIVANKRLPRSFTIRSHVTSDFVVQFAVNTTAVVVSNISNQEDLREECLRRKQCALVLHDGNYSGQERAVVLSLAPKFRGIAFVQVDSRKLQFSLEDALPVS-NGKPRLVYM-EMNPDGKEKKTREKSFSGKSYKGGEWSEESLGGFIDDVI----SKKTKLAKL-----KKHPKV 354
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: A0A7S0TSR5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TSR5_HEMAN) HSP 1 Score: 69.3 bits (168), Expect = 6.820e-9 Identity = 45/176 (25.57%), Postives = 83/176 (47.16%), Query Frame = 1
Query: 247 NRNQMKDVFLGKGAWAVLCSGEGAAYDAVFKRFGTASKAMKGMTKFGVVDCTGSLPSGKSILQKFE---LSEEVSPVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKELMARYRNLKFVSVDSTKLETGIEKK 765
N +Q+K VF G W + C F++ S ++ G+ K+GV+DC+G LPS K+ Q+F+ ++ +PV ++ G P + + + W + S P + + C+ ++ C +M + QP D K++MA +R + FVS++ +T + K
Sbjct: 87 NPDQLKKVFFGGEPWLLHCMNVNTTMALSFEKAAKKS-SVDGLVKYGVIDCSGKLPSNKTFFQRFKTPSVNFTKTPVAYLFANGGGPDKVPDKIFADAKKLAAWAEKHSKPKVQELSWSSSFSKFCLHRDAC--VMLHAKAKYQPVDWMKDVMASHRGVPFVSINRKLHKTSFDDK 259
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Match: A9UZL1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZL1_MONBE) HSP 1 Score: 68.9 bits (167), Expect = 9.160e-9 Identity = 64/213 (30.05%), Postives = 97/213 (45.54%), Query Frame = 1
Query: 163 AGAALGVAVVLALLAKAFAP-PVHFLSTYNRNQMKDVFLGKGAWAVLCSGEGAAYDAVFKRFGTA----SKAMKGMTKFGV----VDCTGSLPSGKSILQKFELSE-EVSPVLFVTGAGMTPVQASARNMETHSSVLKWVQVTSTPGASPVKSTREMESKCMKKEQCALIMKAGPLEDQPKDAFKE-LMARYRNLKFVSVDSTKLET-GIEKK 765
A A LG VLAL P P+ + T + + VFL W V C GEG ++GT S A + K GV ++C+ +LPSGK++ ++F+L E P L G VQ NM++ ++ + S A+ V ST ++ C+ + QC L + GP + + A + L A YR ++D K G+E K
Sbjct: 6 AAATLGALAVLALAYMVLQPAPIVLVDTSDTALLDQVFLSGDPWLVAC-GEG--------QYGTPPELLSLAAPRLAKLGVSAATINCSATLPSGKTVTKRFKLQEWSGKPRLLFAANGRKVVQVMPSNMKSVERLVTFAHSKSKVAATAVTSTSSLQKACLSRRQCLLQLHQGPADRTVRAAAQAALEAGYRTTVHATLDLAKYRLKGLEVK 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig175.42.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig175.42.2 >prot_P-littoralis_Contig175.42.2 ID=prot_P-littoralis_Contig175.42.2|Name=mRNA_P-littoralis_Contig175.42.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=417bp MGNPKAAKNKRPPPLPPSKLAPWFPAGAALGVAVVLALLAKAFAPPVHFLback to top mRNA from alignment at P-littoralis_Contig175:193692..202913- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig175.42.2 ID=mRNA_P-littoralis_Contig175.42.2|Name=mRNA_P-littoralis_Contig175.42.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9222bp|location=Sequence derived from alignment at P-littoralis_Contig175:193692..202913- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig175:193692..202913- >mRNA_P-littoralis_Contig175.42.2 ID=mRNA_P-littoralis_Contig175.42.2|Name=mRNA_P-littoralis_Contig175.42.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1251bp|location=Sequence derived from alignment at P-littoralis_Contig175:193692..202913- (Pylaiella littoralis U1_48)back to top |