mRNA_P-littoralis_Contig174.77.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig174.77.1
Unique NamemRNA_P-littoralis_Contig174.77.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: D7FYS8_ECTSI (RNA binding motif and ELMO/CED-12 domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS8_ECTSI)

HSP 1 Score: 593 bits (1528), Expect = 4.240e-206
Identity = 338/542 (62.36%), Postives = 406/542 (74.91%), Query Frame = 1
Query:    1 NAFGIAYKPYEGYS-RGYHLPSAPAFVDEDEFEQDMSAEFRVVVGTSERRGQPLTTSDIHQIRSNKRAADGDDFHYGD----ISAEDEEGMSGGNGAEKPENAGVASPFPSDLQLNNQEALKKLKEEYERVGPAPQVCTHSAPL-WDYSSKNIGEGHSESSTVADT--GIPEHVGGDVRQYPVTEEEEEKEEEGEPKDGHVDFMNNPDKIGTSDVQREKEDEQQIGTEDENEDSRRARVAKEWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGLFRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQLEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYRKEPAVHHALHLAKVRARMDSESRVLMKAFRAYLSEEEARSAVGIVAKTGGGAAGHELSDFSGAAKRAD 1602
            NAFGIAY+P  G S + Y LPS PAFVDEDEFEQ+MSAEFRV VG S R+G+ L T       SN+  AD  DF  GD    I+   ++G+ GGNG+E+ E+   A  +P  L+L+N+EALK+L ++Y+  G AP V   +AP   D S+K IG G S   ++ D   GI E VG DVR YPVTEEE              + +  P+K+GT +V  E+E E Q    DE+E ++RA VAKEWE IDQLRTAE SVPMEKGVGG LQP++ID+ N +++T EVL YFRSQDL  +   I+P++ PESRFGLFRRA  L+FP+AE+LRDEVF++AQIKY P +V+HRRLIQTIYRRMT EKRACPDVGPHWDT+GFQG DPCTDLNRSMG+FALFQ VL+LLE+QL FAMVLYRLSLADVTGWPF+CVSIGFTKEA+RVLRRGGC++ECNRR  VL+VVHELHQAQFHAFLEL R EPA HHALHLAKVRAR++++S VL+KA+R YL EE+ARSAV IV KTG  AA  E   FSG  K A+
Sbjct:    4 NAFGIAYEPLRGSSQKSYDLPSGPAFVDEDEFEQEMSAEFRVTVGPS-RQGEILATM------SNRTQAD--DFAEGDGTADITMRTQQGVPGGNGSERQEDVNSAPFYPDGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSAKEIG-GRSIERSLTDNAAGILEFVGEDVRHYPVTEEEXXXXXXXXXXXXRKNLVEVPEKMGTLNVPGEREKEGQTSI-DEDESAQRALVAKEWEAIDQLRTAERSVPMEKGVGGKLQPISIDQANRLVTTAEVLGYFRSQDLCTHKAAIVPYQPPESRFGLFRRASKLRFPDAEQLRDEVFILAQIKYAPADVVHRRLIQTIYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQ-VLHLLESQLGFAMVLYRLSLADVTGWPFMCVSIGFTKEALRVLRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELCRTEPATHHALHLAKVRARVETDSHVLVKAYRTYLLEEKARSAVSIVDKTGESAAVQE--QFSGGGKLAE 531          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: A0A836CIH2_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH2_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.460e-56
Identity = 171/535 (31.96%), Postives = 245/535 (45.79%), Query Frame = 1
Query:    7 FGIAYKPYEGYSRGYHLPSAPAFVDEDEFEQDMSAEFRVVVGTSER----------------------------RGQPLTTSDIHQIRSNKRAADGDDFHYGDISAEDEEGMSGGNGAEKPENAGVASPFPSDLQLNNQEALKKLKEEYERVGPAPQVCTHSAPLWDYSSKNIGEGHSESSTVADTGIPEHVGGDVRQYPVTEEEEEKEEEGEPKDGHVDFMNNPDKIGTSDVQREKEDEQQIGTEDENEDSRRARVAKEWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNLMISTKEVLRYFR-SQDLTVYATVIIPFEAPESRFGLFRR--APTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRA--CPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQLEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQC--VLEVVHELHQAQFHAFLELYRKEPAVHHALHLAKVRARMDSESRVLMKAFRAYLSEE 1506
            FGIAYKPY    + Y +P  P F DE +FEQ++SAEF   + T                               R   + T+      + KRAAD    H  D    D    +  NG ++           S  +         L+E+         +  H AP+ + ++ ++ +  S                D  + P +     + E GE                 +++Q      +   T      + R ++A EW+ ID L+ AE+         GT    +    ++ +S  E L   R S  L  + + I+P E P    GL +R   P L  P+A+  RDE+FL+ Q+ Y P    HRR++QT+YR +T    A   P+ G HWD IGFQG+DPCTDLNRS G+ +L Q V+ LLE + E A  L R S   V GWP +CVSIGFTKEAV  LRRG  +   NR     +LE++  +HQAQFH F+    +EP+VHHA+HL  VRA M+     L+KAF  + ++E
Sbjct:  102 FGIAYKPYGAAQQAYVIPCGPLFSDERDFEQELSAEFAAALQTHSSGPVQDDFDCDDGTVAANRETEWVAPQAVRTAAVVTAAAMPPMAAKRAADSQAQHSSDSVQHD----TSTNGPQQQH-----EQLRSHCKTATNALTLALQED---------IVPHGAPVLNAAAPDVMDNDSA---------------DAEEQPESLRALLRGETGE---------------AAAELQ------ETAAT------AARKQLAAEWQAIDTLQGAESLASF--ATPGTEPQFSYTCPSVTLS--EALMALRESGTLESHRSAIVPVELPS---GLLKRLAVPRLSIPDADAQRDEIFLIGQVMYNPASFSHRRMLQTVYRGLTGSSAAVCAPETGSHWDAIGFQGLDPCTDLNRSQGILSLLQ-VMALLEARPEVAAQLMRDS--AVHGWPLMCVSIGFTKEAVAALRRGAIYGAANRHDSGDLLEILSHVHQAQFHDFMRRCHQEPSVHHAVHLCAVRAAMEKSPEKLLKAFEQHCAKE 566          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: A0A7S1TTY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTY8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 5.620e-31
Identity = 98/254 (38.58%), Postives = 132/254 (51.97%), Query Frame = 1
Query:  700 EWETIDQ-LRTAENSVPMEKGVGGTLQ-PVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGLFRRA-------PTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPD-VGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQLEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYRKEPAVHHALHL 1431
            EW  +++ L  A  +     G+ G L+ PVN  E   +++  EV    R   L      I P  APE R GL           P L F      RD  FLVA++KY P    H   ++ IY  +T    ACP  VG HW+ +GFQG DP TDLNRS+GM ++ Q + ++ E +   A  ++RL+    T WPFL VSI FTK A+  LR G  ++ECNRR  V+EV+H+ HQA FH +     +EP      HL
Sbjct:  254 EWAAVERDLEMAPAADGSSVGLAGGLRAPVN--ERTRLVTLFEVEEQLRYMRLEEAGHDIEPAVAPE-RSGLAALCACLSPGPPPLAFQGCNAKRDYPFLVAKVKYDPATETHSGALRAIYFHLTGV--ACPAIVGSHWEAVGFQGADPRTDLNRSLGMLSVLQALAFV-EKRTAVAQRIFRLT--KRTYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTREPGTDGITHL 499          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: UPI00071CE762 (ELMO domain-containing protein 3 n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071CE762)

HSP 1 Score: 125 bits (315), Expect = 2.400e-28
Identity = 92/310 (29.68%), Postives = 155/310 (50.00%), Query Frame = 1
Query:  688 RVAKEWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGL-----FRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQ-LEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYRKEPAVHHALH-----LAKVRARMDSESRVLMKAFRAYLSEEEARSAVGIVAKTGGGAAGHELSDFSG 1584
            R  +EWE ++++++         G+GG     +       IS  E L+YF++ DL+     +   +    R GL     F   P    P  +  R+    +AQ     +E +H R++QTIY+++T  K  CP  G HW+ +GFQG+DP TDL R  GM  L Q + ++++ Q L  A  +++LS  +   +PF  +S+  T+  ++ LR      ECNRRQ V+ V+++L+ A   AFL+LYR     H  +      L ++      + + L+K+  AY++   A   +   +   GG+  HE  +F+G
Sbjct:   45 RAQEEWEAVEEIQS---------GLGGASASASPP-----ISFNEALQYFQTADLSECRKKV---QVTVRRQGLAALVHFLFGPPRLQPQLQGERELALAMAQCGLDDNERVHMRILQTIYKKLTCSKLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQMLYFVMDAQTLPLAQEIFKLSQHETQNFPFCIMSVNITRIVIQALREECLSRECNRRQQVIAVLNDLYAA---AFLQLYRLWKWQHKTVADSGFLLKELEFSTKKKPKQLLKSLEAYMNRGPAVGGLQCPSSASGGSRPHEEINFTG 333          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: A0A8B9RR48_9AVES (ELMO domain containing 3 n=1 Tax=Accipiter nisus TaxID=211598 RepID=A0A8B9RR48_9AVES)

HSP 1 Score: 126 bits (317), Expect = 9.230e-28
Identity = 81/243 (33.33%), Postives = 131/243 (53.91%), Query Frame = 1
Query:  688 RVAKEWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGL-----FRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQ-LEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYR 1398
            R  +EWE+++++++         G+GGT            IS  E L+YF++ DL+     +    A   R GL     F   P    P  +E R+    +AQ     +E +H R++QTIY+++T+ +  CP  G HW+ +GFQG DP TDL R  GM  L Q + +++++Q L  A  +++LS  +   +PF  +S+  T+  ++ LR      ECNRRQ V+ V+++L+ A   AFL+LYR
Sbjct:  171 RAQEEWESVEEIQS---------GLGGTSASAAPP-----ISFNEALQYFQTADLSECRKKV---RATARRQGLAALVRFLFGPPRLQPQLQEERELALAIAQCGLDDNERVHMRILQTIYKKLTRSRLGCPRYGVHWEELGFQGADPGTDL-RGTGMLGLMQMLYFVMDSQTLPLAQEIFKLSQHETQNFPFCVMSVNITRIVIQALREERLSRECNRRQQVIAVLNDLYAA---AFLQLYR 392          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: A0A7L1HJT1_9CHAR (ELMD3 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L1HJT1_9CHAR)

HSP 1 Score: 122 bits (307), Expect = 1.880e-27
Identity = 96/324 (29.63%), Postives = 156/324 (48.15%), Query Frame = 1
Query:  688 RVAKEWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGL-----FRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQ-LEFAMVLYRLS--------------LADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYRKEPAVHHALH-----LAKVRARMDSESRVLMKAFRAYLSEEEARSAVGIVAKTGGGAAGHELSDFSG 1584
            R  +EWE ++++++         G+GGT            IS  E L+YF++ DL+     +    A   R GL     F   P    P  +  R+    +AQ     +E +H R++QTIY+++T+    CP  G HW+ +GFQG+DP TDL R  GM  L Q + ++++ Q L  A  +++LS              L  +  +PF  +S+  T+  ++ LR      ECNRRQ V+ V+++L+ A   AFL+LYR     H  +      L ++      + + L+K+  AY+S   A  ++   +   GG  G E  DF+G
Sbjct:    7 RAQEEWEAVEEIQS---------GLGGTSASAAPP-----ISFNEALQYFQTADLSECRKKV---RATVRRQGLAALIHFFFGPPRLQPQLQGERELALAMAQCGLDDNERVHMRILQTIYKKLTRSSLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQMLYFVMDAQMLPLAQEIFKLSQHETQARGVWAAVTLLLLQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIAVLNDLYAA---AFLQLYRLWKWQHKTIADSGFLLKELEFSTKKKPKQLLKSLEAYMSHSPAAGSLQHPSPASGGGRGREEMDFTG 309          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: UPI001C66E397 (ELMO domain-containing protein 3 isoform X1 n=2 Tax=Tyto alba TaxID=56313 RepID=UPI001C66E397)

HSP 1 Score: 123 bits (308), Expect = 2.840e-27
Identity = 101/331 (30.51%), Postives = 167/331 (50.45%), Query Frame = 1
Query:  643 QQIGTEDENEDSRRARVAKEWETIDQLRTAENSVPMEKGVGGT---LQPVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGL-----FRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQ-LEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYRKEPAVHHALH-----LAKVRARMDSESRVLMKAFRAYLSEEEARSA---VGIVAKTGGGAAGHELSDFSG 1584
            Q +G  + +E+ RRA+  +EWE ++++++         G+GGT     PV        IS  E L++F++ DL+     +    A   R GL     F   P    P  +  R+    +A      +E +H R++QTIY+++T  +  CP  G HW+ +GFQG+DP TDL R  GM  L Q + ++++ Q L  A  +++LS  +   +PF  +S+  T+  ++ LR      ECNRRQ V+ V+++LH A   AFL+LYR     H  +      L ++      + R L+K+  AY+S   A      +   + +GGG+   E  +F+G
Sbjct:   44 QPMGAAEISEELRRAQ--EEWEAVEEIQS---------GLGGTSASAAPV--------ISFNEALQHFQTADLSECRKKV---RAMARRQGLAALVHFFFGPPRLQPQLQGERELALAMAHCGLDNNERVHMRILQTIYKKLTHSRLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQLLYFVMDPQTLPLAQEIFKLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIAVLNDLHAA---AFLQLYRVWKRQHKTVTDSGFLLKELELSAKKKPRQLLKSLEAYVSRSPAAGGFQRLSSPSASGGGSRPGEEIEFTG 348          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: A0A663EBH9_AQUCH (ELMO domain containing 3 n=1 Tax=Aquila chrysaetos chrysaetos TaxID=223781 RepID=A0A663EBH9_AQUCH)

HSP 1 Score: 122 bits (306), Expect = 5.680e-27
Identity = 83/239 (34.73%), Postives = 130/239 (54.39%), Query Frame = 1
Query:  700 EWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNLMISTKEVLRYFRSQDLT-----VYATVIIPFEAPESRFGLFRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQ-LEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYR 1398
            EWE ++++++         G+GGT            IS  E L+YF++ DL+     V ATV     A   RF LF   P    P  +  R+    +AQ     +E +H R++QTIY+++T+ +  CP  G HW+ +GFQG DP TDL R  GM  L Q + +++++Q L  A  +++LS  +   +PF  +S+  T+  ++ LR      ECNRRQ V+ V+++L+ A   AFL+LYR
Sbjct:   64 EWEAVEEIQS---------GLGGTSASAAPP-----ISFNEALQYFQTADLSECRKKVRATVRRQGLAALVRF-LF--GPPRLQPQLQGERELALAIAQCGLDDNERVHMRILQTIYKKLTRSRLGCPRYGAHWEELGFQGADPGTDL-RGTGMLGLMQMLYFVMDSQTLPLAQEIFKLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIAVLNDLYAA---AFLQLYR 281          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: A0A7R5L0A8_9PASS (ELMO domain-containing protein 3 isoform X1 n=3 Tax=Pipridae TaxID=114313 RepID=A0A7R5L0A8_9PASS)

HSP 1 Score: 121 bits (303), Expect = 1.040e-26
Identity = 83/244 (34.02%), Postives = 132/244 (54.10%), Query Frame = 1
Query:  688 RVAKEWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGL------FRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQ-LEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYR 1398
            R  +EWE ++++++         G+GGT  PV        IS  E L++F+S  L+     +     P  R GL          P L+ P     R+ V  +AQ      E +H R++QTIYR++T+ +R CP  G HW+ +GFQG+DP TDL R  GM  L Q + ++L+++ L  A  +++LS  +   +PF  +S+  T+  ++ LR      ECNRRQ V+ V+++L+ A   AFL+L+R
Sbjct:   54 RAQEEWEALEEIQS---------GLGGT-SPVPPPP----ISFAEALQHFQSSGLSQSRRKV---RGPGCRGGLSVLLRCLGGPPRLR-PQLRGERELVLAMAQCALDDSEWVHMRILQTIYRQLTRSRRGCPRYGTHWEELGFQGVDPGTDL-RGTGMLGLMQILFFVLDSRTLSLAREIFQLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIGVLNDLYAA---AFLQLFR 275          
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Match: UPI00145B861C (ELMO domain-containing protein 3 n=2 Tax=Oxudercinae TaxID=497678 RepID=UPI00145B861C)

HSP 1 Score: 122 bits (306), Expect = 1.500e-26
Identity = 92/255 (36.08%), Postives = 131/255 (51.37%), Query Frame = 1
Query:  661 DENEDSRRARVAKEWETIDQLRTAENSVPMEKGVGGTLQPVNIDEDNL---MISTKEVLRYFRSQDLTVYATVIIPFEAPESRFGL-----FRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQ-LEFAMVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVVHELHQAQFHAFLELYR 1398
            DENE+  +AR  +EWE ++                 ++QPV I ED+    +IS  E L+YF++ DL     VI   +    R GL     F   P        E RD VF +AQ      + +H R +QTIY+R+   K  CP  G HW+TIGFQG DP TDL R  G   L   + ++++ + L  A  +Y+LSL     +PF  +SI  T+ A++VLR      ECNRRQ V+ V++E + A    +L LY+
Sbjct:  106 DENEELEKAR--QEWEAVE-----------------SIQPV-ISEDSTPTPLISFNEALQYFQTTDL---GDVIKNIQPTIRRTGLAAITHFLFGPPRLHRELLEERDLVFAIAQCPVDNSQPIHMRALQTIYKRLVGSKLDCPRYGVHWETIGFQGTDPATDL-RGTGFLGLMHSLYFVMDPEMLPLARDIYKLSLHPTQNFPFSVMSINMTRIALQVLREEALSKECNRRQQVVGVLNEFYVA---TYLHLYQ 333          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS8_ECTSI4.240e-20662.36RNA binding motif and ELMO/CED-12 domain n=1 Tax=E... [more]
A0A836CIH2_9STRA1.460e-5631.96ELMO/CED-12 family-domain-containing protein n=1 T... [more]
A0A7S1TTY8_9STRA5.620e-3138.58Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
UPI00071CE7622.400e-2829.68ELMO domain-containing protein 3 n=1 Tax=Calidris ... [more]
A0A8B9RR48_9AVES9.230e-2833.33ELMO domain containing 3 n=1 Tax=Accipiter nisus T... [more]
A0A7L1HJT1_9CHAR1.880e-2729.63ELMD3 protein (Fragment) n=2 Tax=Neognathae TaxID=... [more]
UPI001C66E3972.840e-2730.51ELMO domain-containing protein 3 isoform X1 n=2 Ta... [more]
A0A663EBH9_AQUCH5.680e-2734.73ELMO domain containing 3 n=1 Tax=Aquila chrysaetos... [more]
A0A7R5L0A8_9PASS1.040e-2634.02ELMO domain-containing protein 3 isoform X1 n=3 Ta... [more]
UPI00145B861C1.500e-2636.08ELMO domain-containing protein 3 n=2 Tax=Oxudercin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:283232..287355 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FYS8
Preferred nameELMOD3
PFAMsELMO_CED12
Model size1602
Max annot lvl2759|Eukaryota
KEGG koko:K04139
KEGG Pathwayko04022,ko04080,map04022,map04080
Hectar predicted targeting categoryother localisation
Exons9
Evalue6.96e-207
EggNOG OGsKOG2998@1|root,KOG2998@2759|Eukaryota
Ec32 ortholog descriptionRNA binding motif and ELMO/CED-12 domain
Ec32 orthologEc-19_002370.1
DescriptionELMO domain-containing protein
Cds size1602
COG categoryZ
BRITEko00000,ko00001,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.77.1prot_P-littoralis_Contig174.77.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig174 283232..287355 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789838.8899014-CDS-P-littoralis_Contig174:283231..2834751680789838.8899014-CDS-P-littoralis_Contig174:283231..283475Pylaiella littoralis U1_48CDSP-littoralis_Contig174 283232..283475 +
1680789838.9018157-CDS-P-littoralis_Contig174:283927..2840881680789838.9018157-CDS-P-littoralis_Contig174:283927..284088Pylaiella littoralis U1_48CDSP-littoralis_Contig174 283928..284088 +
1680789838.922335-CDS-P-littoralis_Contig174:284345..2846601680789838.922335-CDS-P-littoralis_Contig174:284345..284660Pylaiella littoralis U1_48CDSP-littoralis_Contig174 284346..284660 +
1680789838.934748-CDS-P-littoralis_Contig174:285206..2853321680789838.934748-CDS-P-littoralis_Contig174:285206..285332Pylaiella littoralis U1_48CDSP-littoralis_Contig174 285207..285332 +
1680789838.9498801-CDS-P-littoralis_Contig174:285524..2856591680789838.9498801-CDS-P-littoralis_Contig174:285524..285659Pylaiella littoralis U1_48CDSP-littoralis_Contig174 285525..285659 +
1680789838.9618883-CDS-P-littoralis_Contig174:285938..2861181680789838.9618883-CDS-P-littoralis_Contig174:285938..286118Pylaiella littoralis U1_48CDSP-littoralis_Contig174 285939..286118 +
1680789838.972371-CDS-P-littoralis_Contig174:286518..2866321680789838.972371-CDS-P-littoralis_Contig174:286518..286632Pylaiella littoralis U1_48CDSP-littoralis_Contig174 286519..286632 +
1680789838.981004-CDS-P-littoralis_Contig174:286745..2869071680789838.981004-CDS-P-littoralis_Contig174:286745..286907Pylaiella littoralis U1_48CDSP-littoralis_Contig174 286746..286907 +
1680789838.9938014-CDS-P-littoralis_Contig174:287190..2873551680789838.9938014-CDS-P-littoralis_Contig174:287190..287355Pylaiella littoralis U1_48CDSP-littoralis_Contig174 287191..287355 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig174.77.1

>prot_P-littoralis_Contig174.77.1 ID=prot_P-littoralis_Contig174.77.1|Name=mRNA_P-littoralis_Contig174.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=534bp
NAFGIAYKPYEGYSRGYHLPSAPAFVDEDEFEQDMSAEFRVVVGTSERRG
QPLTTSDIHQIRSNKRAADGDDFHYGDISAEDEEGMSGGNGAEKPENAGV
ASPFPSDLQLNNQEALKKLKEEYERVGPAPQVCTHSAPLWDYSSKNIGEG
HSESSTVADTGIPEHVGGDVRQYPVTEEEEEKEEEGEPKDGHVDFMNNPD
KIGTSDVQREKEDEQQIGTEDENEDSRRARVAKEWETIDQLRTAENSVPM
EKGVGGTLQPVNIDEDNLMISTKEVLRYFRSQDLTVYATVIIPFEAPESR
FGLFRRAPTLKFPNAEELRDEVFLVAQIKYTPDEVMHRRLIQTIYRRMTK
EKRACPDVGPHWDTIGFQGIDPCTDLNRSMGMFALFQQVLYLLETQLEFA
MVLYRLSLADVTGWPFLCVSIGFTKEAVRVLRRGGCFSECNRRQCVLEVV
HELHQAQFHAFLELYRKEPAVHHALHLAKVRARMDSESRVLMKAFRAYLS
EEEARSAVGIVAKTGGGAAGHELSDFSGAAKRAD
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mRNA from alignment at P-littoralis_Contig174:283232..287355+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig174.77.1 ID=mRNA_P-littoralis_Contig174.77.1|Name=mRNA_P-littoralis_Contig174.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4124bp|location=Sequence derived from alignment at P-littoralis_Contig174:283232..287355+ (Pylaiella littoralis U1_48)
AATGCCTTCGGTATCGCCTACAAGCCATACGAAGGGTATTCGCGGGGATA TCATTTGCCGTCCGCACCCGCGTTCGTTGATGAGGACGAGTTCGAGCAAG ATATGAGCGCAGAGTTCCGAGTTGTGGTCGGAACCTCCGAACGGCGTGGG CAACCCCTGACGACTTCTGACATACACCAAATAAGAAGCAACAAGCGAGC TGCCGATGGCGACGATTTTCATTATGGCGATATTTCGGCCGAGGGTGCCG AGATGGCACAGAAGGCGAGTTGTCAAGGAGAACTGAACCATCTCGTATTG AAAGTAGACGGGTGCTCCACACCTGAAGGGCAGACGTTCCAGATAGACTG GCAGATAAACTGGAACGCCTCAGTGCGCCGCCCGTAGTACCCACCATATA TTCGAGGTGAAACGGGAGTTATTCTCTCGTTGAGGCCTGCCAACGGCCCT TCACCGACATTTAGACGCAAAATCTCACGGTCTATCACTTTGGCAGGAAT GACTGCATAAGAGCACTAGACATTTTGTCCAACCACCATTCATTGACAAG CAGAAATGTATTTGAACTTCGTATGTCCTTCGCCTAAATACAATAAAAGA GGCGCATCCACTCGATACGTGCGCCTCGTTTGCGTCGGCTATCTTACTCT ACTCTTCAGAATACTAACAATAAGTCGAGTTCAACGCTCTCAAGAGATGA AGAGGGCATGTCGGGTGGCAACGGGGCAGAGAAACCAGAGAACGCCGGGG TGGCATCACCCTTTCCAAGTGACTTACAACTGAATAATCAAGAGGCGCTC AAGAAACTAAAGGAGGAGTACGAGAGGGTCGGGCCCGCTCCGCAGGTATG TACACACGTTTAATAATTGATGCAAGTTGTGAAAGCTCGATTGCACGAGG CCTCTCAAAGATTTTGCTGGCTGCGGTGACCGGGTAGTATGCGTAAATGT TGTAGCGAAAATAAAAATCAGTTCCGGTCAAGATTGGATACTCTCATGAT CGGAGGTTCAACGCAGCGTTATCCTGCTATCATAGCACTGGTTGCGTTGT GAGGACCACCCACGAATTCGACGGCTGCTTGCTTGCCCTTTTATCACAAC CTCAGCGTATCGAGAGTGCTCCATTATGGGACTACTCCTCCAAAAACATC GGAGAAGGGCATAGCGAGAGCAGCACAGTAGCTGATACGGGGATTCCTGA GCATGTTGGTGGAGACGTCCGACAGTATCCTGTAACGGAAGAGGAGGAAG AGAAGGAGGAGGAGGGCGAGCCAAAGGACGGACACGTAGACTTTATGAAC AATCCAGATAAAATTGGCACTTCAGATGTTCAGCGGGAGAAGGAGGATGA GCAGCAGATCGGTACTGAGGACGAGAACGAGGATTCCCGACGCGCTCGCG TTGCAAAAGAATGGGAGACCATCGATCAGGTTGGAGGGGTATATCCGGTG TACCAACGGTTCCTCCCACACCCGATATGCTGCAACACCACCATGTACTT CCTAAGGAACGACACTTTCTCGTCTCCGTCTTGTCAGCATGTTTTGACGA AGTTTTGATTACGCCACCACTGATCAAACTCAAGAAACAATTAAAAGAGC TGCTGCTATGAAGTGGTTTAAAGGCGTGGTCCTATCCCACCACGGAGGCG GCGTCTTCTTTCCTTCTAGATACCATGTGGCGAGGAATACCAAGCGTCTC CGAGCGAACTCGGATAGGCAAGGGTAAGGTTTTAAGAGCGAGGTCAAGCC ATCTTGGACTGTTTTTCCCCGATCCTAAAGATTCCGTCAGCGTTCGCAGC ACTGAGAAATTACCTGTGTCCAGATATAGATACCGCTGGGGCTATACTGC CCCGAGAGGCTCCATATCTGTAGTATTCGTATGTGCGTATATATGCTGAG AAGATTCAATATCCTGGCATCCACACTTCGGCTGTTTTGCGCTCGATGTG TGGGAACGACGTCGTTCGATCTCAGCTGCGAACGGCGGAAAATTCTGTGC CTATGGAAAAAGGAGTCGGGGGAACTTTGCAACCAGTCAACATCGACGAG GATAATCTCATGATCAGCACCAAAGAAGTACTACGCTACTTCCGTTCGCA GGTGAGACGAAGATCAAAACGTGGTACTGACCTACGGAGCTGTAGATTTT CGAAGTATACGTGCCGTGCGCGGTCGTGGTCCGTGCTGTCGTGACTGACA TGTATATTAAGTTCACGTGGAACAGAAGATGGTTCACTACGAAAAATGGC TGTGATGAATGATGACAACTGGCCAAACCGATAACCTTTCCAGGACCTGA CTGTGTACGCGACAGTCATCATCCCTTTTGAGGCACCCGAGAGCCGATTC GGTCTTTTTCGCAGGGCCCCGACGCTCAAGTTTCCAAATGCAGAGGAACT TCGGGATGAAGTATTCCTAGTTGCGCAGGTGACGATGCCGACTTGCCAAG TCCAGGCGTTTATTGCCATTTTGTGGGTGCACTCGAAATAGCAAGTACTT TCTCTAGAATAGCTCAGGCATAGGTGCAAGAAGCTCTGAGCTGTCGGGAA GGATTGTCTGGCATACGAACTAATTGGGTACCGGCATGTGTGCTTTCGTA CAAGCGAACAAAGGCCTGGCCAAACGCCTGGTCTTTCAACTTCTTCGATG GGCAAAATGTTGTTTAATCGGTTGAAAACACCCAATCCGCCCTGCTCCGG GAGACAGATAAAATACACGCCAGATGAGGTGATGCATCGTCGCCTCATCC AGACCATCTACCGACGGATGACGAAAGAGAAGCGAGCTTGTCCCGACGTG GGCCCCCACTGGGACACTATCGGCTTTCAGGGGATCGACCCCTGCACGGA CTTAAATCGTTCAATGGGCATGTTTGCATTATTCCAGGTTTGTGTTAGAC ACGGTAGTGGTGGTGATAGTGGTGGTGAACCCCGTTTACAACAACCCGCG GCATGGCGAACGTAAAGCAGGGACAGGAATACACGTATTGTACCACTGAG ACACAAGTGTAGATGACGGAGCAAAACTCGTGGTTGGGATTTGGGGAAAG GCGCGTACGTGAATCGCTGGGCAGTCTTTGAGTAAGCATATGTTTGCCCG TTCTCTATACTGCCACCGTTGCCCGCAACCCCTTCCTACCCCCCGGCTAT TTTCTGTGTTGAACGCAAATCCGATTCCGGGTTGGACACAAGGGTGACCT GGCCGATAACCTAAAACCGCATACCATGTACACAGCTTTCAACGCGTGCA AGTATAGATATCTAATAGCGTGTTCGATGTGTGACAGCAGGTCCTGTATT TGCTGGAAACGCAGCTCGAGTTTGCCATGGTGCTGTACCGACTCTCCCTA GCGGATGTTACAGGCTGGCCATTCTTGTGCGTGAGCATCGGGTTCACGAA GGTAGGACAGAATGATCTGGATGTTTTTGTATAAATGAGCAAGCCTCGAT ATGCATGGGTGCACATATTTACACCCTAATTATTCGTGCACACGTCAACG TTGTCAACAAACAGGAAGCCGTGAGAGTTTTGCGTCGCGGTGGCTGTTTC TCAGAGTGCAATCGACGGCAGTGTGTATTGGAGGTGGTCCATGAGCTTCA CCAGGCGCAGTTCCACGCGTTCCTGGAGCTGTACAGAAAAGAGCCGGCCG TTCACCATGCCCTACATCTCGCTAAGGTGGCTAAGCCCTCGCATGGTTAT AGCGGCGCCTGTCAAATGTCACGCCAAGACCAGACATTTGAATCATGCTC GTGAAGCATGGTGAACTTTCATCAGCAGCGATTGACTCAAATATTGTCGA TGTTGCTACGGTGATCGATGTGCACGCCTCCACGTCTTAAACGTTGTCGC TGGGGGGTTACGTTGTTGTGTGTATTGTGCTTTTCGGCATCGGTCCTACT GTCTGCCATCAAAATAATCGCTTTTCACGCAAATCTTAATTCTTTTATCG TCACTGCAGGTCCGTGCTCGAATGGACTCTGAATCCCGCGTTCTGATGAA GGCTTTTCGTGCGTATCTCTCAGAAGAGGAAGCTAGGTCGGCAGTAGGTA TCGTGGCGAAGACGGGGGGAGGGGCGGCGGGACACGAGCTTTCGGATTTC TCGGGTGCAGCGAAAAGGGCCGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig174:283232..287355+

>mRNA_P-littoralis_Contig174.77.1 ID=mRNA_P-littoralis_Contig174.77.1|Name=mRNA_P-littoralis_Contig174.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1602bp|location=Sequence derived from alignment at P-littoralis_Contig174:283232..287355+ (Pylaiella littoralis U1_48)
AATGCCTTCGGTATCGCCTACAAGCCATACGAAGGGTATTCGCGGGGATA
TCATTTGCCGTCCGCACCCGCGTTCGTTGATGAGGACGAGTTCGAGCAAG
ATATGAGCGCAGAGTTCCGAGTTGTGGTCGGAACCTCCGAACGGCGTGGG
CAACCCCTGACGACTTCTGACATACACCAAATAAGAAGCAACAAGCGAGC
TGCCGATGGCGACGATTTTCATTATGGCGATATTTCGGCCGAGGATGAAG
AGGGCATGTCGGGTGGCAACGGGGCAGAGAAACCAGAGAACGCCGGGGTG
GCATCACCCTTTCCAAGTGACTTACAACTGAATAATCAAGAGGCGCTCAA
GAAACTAAAGGAGGAGTACGAGAGGGTCGGGCCCGCTCCGCAGGTATGTA
CACACAGTGCTCCATTATGGGACTACTCCTCCAAAAACATCGGAGAAGGG
CATAGCGAGAGCAGCACAGTAGCTGATACGGGGATTCCTGAGCATGTTGG
TGGAGACGTCCGACAGTATCCTGTAACGGAAGAGGAGGAAGAGAAGGAGG
AGGAGGGCGAGCCAAAGGACGGACACGTAGACTTTATGAACAATCCAGAT
AAAATTGGCACTTCAGATGTTCAGCGGGAGAAGGAGGATGAGCAGCAGAT
CGGTACTGAGGACGAGAACGAGGATTCCCGACGCGCTCGCGTTGCAAAAG
AATGGGAGACCATCGATCAGCTGCGAACGGCGGAAAATTCTGTGCCTATG
GAAAAAGGAGTCGGGGGAACTTTGCAACCAGTCAACATCGACGAGGATAA
TCTCATGATCAGCACCAAAGAAGTACTACGCTACTTCCGTTCGCAGGACC
TGACTGTGTACGCGACAGTCATCATCCCTTTTGAGGCACCCGAGAGCCGA
TTCGGTCTTTTTCGCAGGGCCCCGACGCTCAAGTTTCCAAATGCAGAGGA
ACTTCGGGATGAAGTATTCCTAGTTGCGCAGATAAAATACACGCCAGATG
AGGTGATGCATCGTCGCCTCATCCAGACCATCTACCGACGGATGACGAAA
GAGAAGCGAGCTTGTCCCGACGTGGGCCCCCACTGGGACACTATCGGCTT
TCAGGGGATCGACCCCTGCACGGACTTAAATCGTTCAATGGGCATGTTTG
CATTATTCCAGCAGGTCCTGTATTTGCTGGAAACGCAGCTCGAGTTTGCC
ATGGTGCTGTACCGACTCTCCCTAGCGGATGTTACAGGCTGGCCATTCTT
GTGCGTGAGCATCGGGTTCACGAAGGAAGCCGTGAGAGTTTTGCGTCGCG
GTGGCTGTTTCTCAGAGTGCAATCGACGGCAGTGTGTATTGGAGGTGGTC
CATGAGCTTCACCAGGCGCAGTTCCACGCGTTCCTGGAGCTGTACAGAAA
AGAGCCGGCCGTTCACCATGCCCTACATCTCGCTAAGGTCCGTGCTCGAA
TGGACTCTGAATCCCGCGTTCTGATGAAGGCTTTTCGTGCGTATCTCTCA
GAAGAGGAAGCTAGGTCGGCAGTAGGTATCGTGGCGAAGACGGGGGGAGG
GGCGGCGGGACACGAGCTTTCGGATTTCTCGGGTGCAGCGAAAAGGGCCG
AC
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