mRNA_P-littoralis_Contig173.81.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: UPI00106C0330 (uncharacterized protein LOC114542457 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C0330) HSP 1 Score: 76.3 bits (186), Expect = 1.220e-13 Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 1
Query: 7 LFISAENQEDEDEANRLRHLGAMVVMVVCRIWRDEAELAPTIRGGEPVIDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYD 414
LF S DED+ + + + M CR+ R I+DL+D + +RF K D+ RLF A + P AY R R + A ++LLRR+ YP RW DL FGR +QLS IFN+++D Y+
Sbjct: 16 LFESDSESSDEDDLD-IALIEHMFTSTKCRLPRLN-------------IEDLSDWQCEKMFRFHKDDMLRLFAALRIP-AYYRAEQRTKASGMEALMILLRRLAYPNRWCDLVGIFGRSESQLSLIFNKILDDIYN 136
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF) HSP 1 Score: 70.9 bits (172), Expect = 1.190e-11 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 109 EAELAPTIRGGEPVIDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYDN 417
EA P ++ ++DL+D + +RF K DL RL A + P Y+ + + L++LRR+ YP RW DLQ FGR ++LS IFNEV+D Y++
Sbjct: 82 EASCTPRLK-----LEDLSDTQCQQMFRFEKQDLYRLRDALQVPANYICSQG-TKATGLEGLLIMLRRLAYPNRWCDLQSLFGRSESELSLIFNEVIDDIYES 178
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: D8LJH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH1_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 2.940e-10 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 250 LRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYD 414
+RL N + + E AFLLLL RMRYPGR DL++ FGREY+QLSR+F D+ ++
Sbjct: 46 VRLENGSTFSGEEAFLLLLMRMRYPGRLSDLEKYFGREYSQLSRLFRWATDFLFE 100
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: A0A6S7K945_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K945_PARCT) HSP 1 Score: 64.7 bits (156), Expect = 3.270e-10 Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 151 IDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAY 411
+D TD+E N+RF+K D+ L A + P +L +N S +LLRR+ YP R D+ FGR T+LS IFN VVD+ +
Sbjct: 50 LDKYTDEECVLNFRFQKVDVLHLVTALRLPNQFL-CKNGTIAGSLGGLCVLLRRLAYPNRLTDMIAMFGRSKTELSMIFNNVVDFVF 135
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: UPI001CF223A5 (uncharacterized protein LOC122949353 isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF223A5) HSP 1 Score: 66.2 bits (160), Expect = 5.040e-10 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 151 IDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYD 414
+ D+ D + A +RF K D+KRL A + P Y+ + E A ++LL+R+ YP RW DL FGR ++LS IFN+++D YD
Sbjct: 94 LQDIPDVQCEAMFRFAKGDMKRLRDALQLPANYICSQGTIATGME-ALMILLKRLAYPNRWCDLVPVFGRTVSELSLIFNKIMDDIYD 180
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: UPI000F5553D4 (uncharacterized protein LOC113664837 isoform X1 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F5553D4) HSP 1 Score: 65.1 bits (157), Expect = 1.190e-9 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 151 IDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYD 414
+ D+ D + A +RF K D++RL + P Y+ + E A ++LLRR+ YP RW DL FGR ++LS IFN+++D YD
Sbjct: 54 LQDIPDIQCEAMFRFPKGDMERLRDTLQLPANYICSQGTIATGME-ALMILLRRLAYPNRWSDLVPVFGRTVSELSLIFNKIMDDIYD 140
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: A0A6J7ZWW5_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J7ZWW5_MYTCO) HSP 1 Score: 62.4 bits (150), Expect = 1.470e-9 Identity = 35/112 (31.25%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 82 MVVCRIWRDEAELAPTIRGGEPVIDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYDN 417
+++ + ++E + P I+ ++ LT+++ + +RF K D++ L +A + P + NR ++LRR+ YP R +DL+ FGR T+LS I NEV+D+ +DN
Sbjct: 17 LLLLSLCKEEKDNFPGIK-----VEKLTNEQCRSFFRFDKDDIEILRRALRIPQKVV-CSNRTTARGIDGLCMVLRRLAYPSRLEDLEYLFGRSKTELSLIINEVLDYIHDN 122
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: A0A6P8HEE0_ACTTE (uncharacterized protein LOC116291725 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEE0_ACTTE) HSP 1 Score: 64.7 bits (156), Expect = 1.630e-9 Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 157 DLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYD 414
D+TD + +RF+K D++ L + P ++ R + A ++LLRR+ YP RW DL FGR ++LS IFN+V+D YD
Sbjct: 56 DITDADCETMFRFQKNDMEHLLDCLQIPEHFV-CSQRTKATGMEALMILLRRLAYPNRWCDLVPIFGRPESELSLIFNKVLDDIYD 140
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: A0A836CJM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJM3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.070e-9 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 1
Query: 115 ELAPTIRGGEPVIDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIF 387
E AP R ++ +D W +RFRK ++RL +A P + L NR++ + A L+ L R+ P R D++ FGRE TQLSRIF
Sbjct: 15 EYAPIRRLNRTLVS-FAEDACWMQFRFRKEHIQRLRRALGVPDVVV-LPNRSKDDGDEALLIFLHRLSRPSRLTDVKETFGREETQLSRIF 103
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Match: A0A6J8BI25_MYTCO (DDE Tnp4 domain-containing protein n=3 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BI25_MYTCO) HSP 1 Score: 62.4 bits (150), Expect = 5.540e-9 Identity = 39/127 (30.71%), Postives = 70/127 (55.12%), Query Frame = 1
Query: 46 ANRLRHLGAMV---VMVVCRIWRDEAELAPTIRGGEPVIDDLTDDEAWANYRFRKPDLKRLFQAFKFPGAYLRLRNRARYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYDN 417
A +L+ L A+ +++ + ++E + P I ++ LT+++ + +RF K D++ L +A + P + NR ++LRR+ YP R +DL+ FGR T+LS I NEV+D+ +DN
Sbjct: 2 AEKLKVLAALEDSDELLLLSLCKEEKGIFPGIE-----VEKLTNEQCRSFFRFDKDDIEILRRAMRIPEKVV-CSNRTTARGIDGLCMVLRRLAYPSRLEDLEYIFGRSKTELSLIINEVLDYLHDN 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig173.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig173.81.1 >prot_P-littoralis_Contig173.81.1 ID=prot_P-littoralis_Contig173.81.1|Name=mRNA_P-littoralis_Contig173.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp MALFISAENQEDEDEANRLRHLGAMVVMVVCRIWRDEAELAPTIRGGEPVback to top mRNA from alignment at P-littoralis_Contig173:437735..438747+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig173.81.1 ID=mRNA_P-littoralis_Contig173.81.1|Name=mRNA_P-littoralis_Contig173.81.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1013bp|location=Sequence derived from alignment at P-littoralis_Contig173:437735..438747+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig173:437735..438747+ >mRNA_P-littoralis_Contig173.81.1 ID=mRNA_P-littoralis_Contig173.81.1|Name=mRNA_P-littoralis_Contig173.81.1|organism=Pylaiella littoralis U1_48|type=CDS|length=417bp|location=Sequence derived from alignment at P-littoralis_Contig173:437735..438747+ (Pylaiella littoralis U1_48)back to top |