mRNA_P-littoralis_Contig173.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig173.3.1 vs. uniprot
Match: A0A6H5JIS8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS8_9PHAE) HSP 1 Score: 332 bits (851), Expect = 5.540e-98 Identity = 181/389 (46.53%), Postives = 252/389 (64.78%), Query Frame = 2
Query: 221 HEVLSAVQGTAGQQRKSSVADSFDGFVRARSAGARGWKTATDVDVFEWLCWLDSHGKGTKLVHAPTCPGVGTTSTSRCKLGSTCAKRYGAASLATGYVSRLKCVLMEQLGKLDDWDCVEKRGNPVASPLVRSYMTFVQGEQRKVGVGVKQASPLLASQVRDLVVDMRRRLPTLTTAAARMAMTRDVAVFCLAFHTMKRGFDLSVAVAAKVLRLQGGEGFIFNFLFGKTLRSSSQAVVVKKNLDCRAICAVAAMLAYQQAATSLQWSLGEGAGFLFPTVRDDGTKGEVALTPAQMTTNLQAHLRAAGITDQRYTLHSFRVGGAASHNMDGTAMDVLMEYVGWKSTPVARRYAGQTASAVGQGANKRSRDTAFLEADALPLSDAFMSSHVA 1387
+E+ +A+ G AG+ RK VAD FD F+ + S G +GW A+ DV +W +LDS GKGTKLVH TC GVG++ C G+TC KRYGA SL G+ S+LK EQLG+ DDW+ GNP ASP V +Y+TF EQ++VGV KQA+PLL + +L+ MR R + A R+A+TRDVA+F LA H+M+RGFDLS + ++VLRL GFIFNFLFGKTLR+S++A+VV + + R +CAV A+ Y AA + W L +G+LFP+V DDG++G L QMT++LQAHLRAA + +++HSFRVGG+ S +M G+A++ +M+ GWK+ +A+ Y + ++KR R + + PLS AF + A
Sbjct: 677 YEMEAAMSGRAGEVRKHRVADEFDLFLLSYSGGGKGWVHASPDDVVDWFSYLDSQGKGTKLVHDATCAGVGSSDRRSCSPGATCKKRYGAESLRKGFYSKLKMAYKEQLGRGDDWNPTVGSGNPCASPTVDAYLTFTTEEQKRVGVTAKQAAPLLEDTLGELLPHMRLRALASDSMAERIAITRDVALFSLAHHSMRRGFDLSFTLGSQVLRLPESRGFIFNFLFGKTLRASTEAIVVLASTN-RDVCAVRAVAEYILAAQQVGWDLS--SGYLFPSVLDDGSRGNSKLVATQMTSSLQAHLRAASLP-AHFSMHSFRVGGSLSRSMGGSAIEEIMQIGGWKTESMAKYYV--------EPSSKRQRAANYTATNEEPLSPAFETDFAA 1053
BLAST of mRNA_P-littoralis_Contig173.3.1 vs. uniprot
Match: A0A6H5KRN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN9_9PHAE) HSP 1 Score: 234 bits (596), Expect = 1.210e-62 Identity = 132/279 (47.31%), Postives = 172/279 (61.65%), Query Frame = 2
Query: 338 ATDVDVFEWLCWLDSHGKGTKLVHAPTCPGVGTTSTSRCKLGSTCAKRYGAASLATGYVSRLKCVLMEQLGKLDDWDCVEKRGNPVASPLVRSYMTFVQGEQRKVGVGVKQASPLLASQVRDLVVDMRRRLPTLTTAAARMAMTRDVAVFCLAFHTMKRGFDLSVAVAAKVLRLQGGEGFIFNFLFGKTLRSSSQAVVVKKNLDCRAICAVAAMLAYQQAATSLQWSLGEGAGFLFPTVRDDGTKGEVAL----TPAQMTTNLQAHLRAAGITDQRYTL 1162
A+D DVF++LC+LD+ G GTK VH CPGVG T C STCAKRY AAS+ G VS+LK + EQLGK WD + GNP +SPLV SY+ F EQ++VGV V QA +L + DL+ DMR R T ++ A R+ +TRDVA+F LAF M+RG DLS + ++VL+L G+G IFNF FGKTLR S AVVV ++ C +ICAV+ + Y AA + W L +G LFP V DGT+ T T + L +T++R+TL
Sbjct: 715 ASDRDVFDYLCFLDTQGSGTKWVHDRACPGVGATHGRDCLPNSTCAKRYAAASMQKGIVSKLKMAMQEQLGKERSWDPATRSGNPCSSPLVDSYLVFTGEEQKRVGVAVNQAEAMLPHVLIDLLRDMRSRAQTASSLAERIELTRDVALFSLAFAPMRRGHDLSFTMGSQVLQLPAGQGLIFNFQFGKTLRDSVDAVVVSPDVACPSICAVSNVTGYISAAERIGWDLSQG--HLFPVVLLDGTRDICERRDYRTATLCTRSASEVLLRTRLTERRWTL 991
BLAST of mRNA_P-littoralis_Contig173.3.1 vs. uniprot
Match: A0A6S7LFC2_PARCT (LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LFC2_PARCT) HSP 1 Score: 136 bits (343), Expect = 8.840e-30 Identity = 116/396 (29.29%), Postives = 181/396 (45.71%), Query Frame = 2
Query: 62 WIPRVLCNACQGINLGTYVFCQFCKIPAYRGEPVPRSAGPPTVIFEDKLNERIHEVLSAVQGTAGQQRKSSVADSFDGFVRARSAGARGWKTATDVDVFEWLCWLDSHGKGTKLVHAPTCPGVGTTSTSRCKLGSTCAKRYGAASLATGYVSRLKCVLMEQLGKLDDWDCVEKRGNPVASPLVRSYMTFVQGEQRKVGVGVKQASPLLASQVRDLVVDMRRRL--PTLTTAAARMAMTRDVAVFCLAFHTMKRGFDLSVAVAAKVLRLQGGEGFIFNFLFGKTLRSSSQAVVVKKNLDCRAICAVAAMLAYQQAATSLQWSLGEGAGFLFPTVRDDGTKGEVALTPAQMTTNLQAHLRAAGITDQRYTLHSFRVGGAASHNMDGTAMDVLMEYVGW 1243
++P V C C N + FCQ C R PR V E+ L+ R+HE+ T ++K S+ + F+ A G+ T T DV +L + D GK +H +C +G C C R ++ + Y+ +L+ +L Q G+ +WD GNP A V+ Y+ V EQ + V KQA+P ++ L + ++R+L P L + + + RD A F AF + R DLS +++LR +GF+FN ++GKTLR Q V + AIC + + Y A L S+ +G+LF G + T A L+A+L+ D+ TLH FR G A + + G + +M++VGW
Sbjct: 589 FVPSVKCPDCSHANDIDFPFCQKCGYQR-RIRATPRVESGLQVDLEE-LDNRLHELFEYDHATKYSKQKDSLQRELESFLTALP-GSIILATVTPRDVCRFLFFKDQDGK--IQIHRNSCQFLGQRGQHACG----CPLRLSYKTVDS-YIGKLRSILHAQ-GRSGEWDKRLALGNPAADQSVKDYLRCVTREQLQARVTPKQATPFFVHKLTQLSLHLQRKLDSPGLPSLQ-KFIIARDQAYFKTAFFSGDRPGDLSQVKVSEILRFPNDDGFLFNHIWGKTLRDGDQNVFGIRRNSHTAICPIRGIEQYMDVAQQL--SIDLTSGYLFRPTTPKGGIHDSPFTSAAAEARLKAYLKEMN-ADEGETLHGFRSGCAITLALTGADLAEIMDHVGW 969
BLAST of mRNA_P-littoralis_Contig173.3.1 vs. uniprot
Match: UPI001CF1B401 (uncharacterized protein LOC122962045 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1B401) HSP 1 Score: 107 bits (267), Expect = 2.110e-21 Identity = 93/343 (27.11%), Postives = 156/343 (45.48%), Query Frame = 2
Query: 248 TAGQQRKSSVADSFDGFVRARSAGARGWKTATDVDVFEWLCWLDSHGKGTKLVHAPTCPGVGTTSTSRCKLGSTCAKRYGAASLATGYVSRLKCVLMEQLGKLDDWDCVEKRGNPVASPLVRSYMTFVQGEQRKVGVGVKQASPLLASQVRDLVVDMRRRLPTLTTAAARMAMTRDVAVFCLAFHTMKRGFDLSVAVAAKVLRLQGGEGFIFNFLFGKTLRSSSQAVV-VKKNLDCRAICAVAAMLAYQQAATSLQWSLGEGAGFLF-PTVRDDGTKGEVALTPAQMTTNLQAHLRAAGITDQRYTLHSFRVGGAASHNMDGTAMDVLMEYVGWKSTPVARRY 1270
T+ ++K S+ F+ F+ A G T T D +L + D +GK +H C +G C C R ++ + Y+ +L+ +L +G+ +WD GNP + V+ ++ V +Q + V KQA+P ++ L + ++ A + + RD A F LAF + R DL ++LR +GF+FN ++GKTLR V V++N IC + + Y + ++ L G+LF PT D G K + T + + L+++L+ D TLH FR G A + + G + +M++VGW A Y
Sbjct: 7 TSYAKQKDSLRKEFETFL-ASLPGQITIATVTPRDTCRFLVFKDKNGK--TQIHRNGCKYIGQAGRYTCG----CPIRLSYKTVDS-YIGKLRAIL-HSVGRDGEWDKRLGLGNPASDKSVKDFLRMVTADQLQARVTPKQATPFFIDKLIQLCSHLDKKWRQSDRAIDKFVIARDQAYFKLAFFSGDRPGDLGQVKVPEILRFPNDDGFLFNHIWGKTLRDGDDNVFGVRRNAQA-GICPIRGIERYIEVTRDIRVDLT--CGYLFRPTTPDFGIK-DAPFTSSAAESRLKSYLKEMNADDGE-TLHGFRSGCAITLALTGADLAEIMDHVGWTRRHTALYY 335
BLAST of mRNA_P-littoralis_Contig173.3.1 vs. uniprot
Match: UPI00109B7D32 (uncharacterized protein LOC114574514 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B7D32) HSP 1 Score: 89.4 bits (220), Expect = 6.050e-15 Identity = 67/242 (27.69%), Postives = 112/242 (46.28%), Query Frame = 2
Query: 203 KLNERIHEVLSAVQGTAGQQRKSSVADSFDGFVRARSAGARGWKTATDVDVFEWLCWLDSHGKGTKLVHAPTCPGVGTTSTSRCKLGSTCAKRYGAASLATGYVSRLKCVLMEQLGKLDDWDCVEKRGNPVASPLVRSYMTFVQGEQRKVGVGVKQASPLLASQVRDLVVDMRRRLPTLTTAAARMAMTRDVAVFCLAFHTMKRGFDLSVAVAAKVLRLQGGEGFIFNFLFGKTLRSSSQAV 928
++++R+ ++ + Q T ++K S+ F+ A G T T D+ +L + D GK VH +C +G C C R ++ + Y+ +L+ + LG+ +WD GNP + LV+ ++ V EQ + V KQA+P ++ L ++R L + R + RD A F F + RG DL ++LR +GF+FN ++GKTLR Q V
Sbjct: 268 EIDDRLRQLENYDQVTKYSKQKDSLRRELCSFL-AGLPGQVSLVTVTPRDLCRFLVYKDKDGK--TQVHRNSCGYLGQRGRFECG----CPMRLSYKTVDS-YIGKLRSIF-HSLGRDGEWDRRLGLGNPASDKLVKDFLRLVTAEQLQARVTPKQATPFFVDKLVKLAGYIQRELERVKDPVQRFILARDQAYFKTMFFSGDRGGDLGQVKVPEILRFPNDDGFLFNHVWGKTLRDGDQNV 500
BLAST of mRNA_P-littoralis_Contig173.3.1 vs. uniprot
Match: UPI00077A935F (uncharacterized protein LOC107343896 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A935F) HSP 1 Score: 64.7 bits (156), Expect = 2.420e-7 Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 2
Query: 845 KVLRLQGGEGFIFNFLFGKTLRSSSQAVV-VKKNLDCRAICAVAAMLAYQQAATSLQWSLGEGAGFLFPTVRDDGTKGEVALTPAQMTT---NLQAHLRAAGITDQRYTLHSFRVGGAASHNMDGTAMDVLMEYVGWKSTPVARRY 1270
++LR +GF+FN ++GKTLR V +K+N R IC V + Y + A L+ L G +LF R +G V P TT L+ +L+ G +D+ TLH FR G A + + G + +M++VGW A Y
Sbjct: 8 EILRFPNDDGFLFNHVWGKTLRDGDSNVFGIKRNPQSR-ICPVQGIEQYMEVAQQLRIDLTRG--YLF---RPTTPQGGVLDAPFNSTTAEARLKVYLKEMG-SDKGETLHGFRAGCAITLALSGAELSEIMDHVGWTQRHTALYY 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig173.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig173.3.1 >prot_P-littoralis_Contig173.3.1 ID=prot_P-littoralis_Contig173.3.1|Name=mRNA_P-littoralis_Contig173.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=461bp MAALPYGATRAADWIPRVLCNACQGINLGTYVFCQFCKIPAYRGEPVPRSback to top mRNA from alignment at P-littoralis_Contig173:6185..8065+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig173.3.1 ID=mRNA_P-littoralis_Contig173.3.1|Name=mRNA_P-littoralis_Contig173.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1881bp|location=Sequence derived from alignment at P-littoralis_Contig173:6185..8065+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig173:6185..8065+ >mRNA_P-littoralis_Contig173.3.1 ID=mRNA_P-littoralis_Contig173.3.1|Name=mRNA_P-littoralis_Contig173.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1383bp|location=Sequence derived from alignment at P-littoralis_Contig173:6185..8065+ (Pylaiella littoralis U1_48)back to top |