mRNA_P-littoralis_Contig173.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 302 bits (773), Expect = 5.240e-97 Identity = 149/204 (73.04%), Postives = 169/204 (82.84%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLPTPQGGDSDVEL 612
RPNNGS+++QR ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKA DPKTGKL PPGRG V+TWCK AWA ITP+ VKT CFKICGLTLALDGSEDHAWC HNFG+GY LL+QQR +W A HP VTLPPLQ P VP + A N +AA +E+E LLP +G DSD+E+
Sbjct: 356 RPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKT-CFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTA--NHIEAAAKELEAGLLP--RGDDSDIEI 554
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.780e-96 Identity = 149/204 (73.04%), Postives = 168/204 (82.35%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLPTPQGGDSDVEL 612
RPNNGSI++QR ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKA DPKTGKL PPGRG V+TWCK AWA ITP+ KT CFKICGLTLALDGSEDHAWC HNFG+GY LL+QQR +W A HP VTLPPLQ P VP + A N +AA +E+E LLP +G DSD+E+
Sbjct: 363 RPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKT-CFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTA--NHIEAAAKELEAGLLP--RGDDSDIEI 561
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 285 bits (729), Expect = 1.400e-94 Identity = 147/207 (71.01%), Postives = 164/207 (79.23%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLP-TPQGGDSDVELLE 618
RPNNGSII+QR ILVLDDFKCH+ E FIA L++ ANTIVI IPGG TPLLQPLDRMLNKQMKRLLRG YTA++A AV D ++GKLKPP RG VSTWCK+AW ITP+ VKT CFKICGLTLALDGSEDHAWC HNFGE Y LL++Q A W A HP VTLPPL+ P VP G +NP AAQ+EVEGKLLP DS+VE+ E
Sbjct: 27 RPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKT-CFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPYVADESDSEVEVSE 230
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 295 bits (754), Expect = 9.500e-94 Identity = 148/204 (72.55%), Postives = 165/204 (80.88%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLPTPQGGDSDVEL 612
RPNNGSI++QR ILVLDDFKCH+D+ FIA L K+ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTA+TAKA DPKTG L PPGRG V+TWCK AWA ITP+ VKT CFKICGLTLALDGSEDHAWC HNFG+GY LL+QQR +W A HP VTLP LQ P VP + A N +AA +E+E LLP G DSD+E+
Sbjct: 393 RPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKT-CFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAESTA--NHIEAAAKELEAGLLPC--GDDSDIEI 591
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 281 bits (719), Expect = 1.080e-91 Identity = 144/207 (69.57%), Postives = 164/207 (79.23%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLP-TPQGGDSDVELLE 618
RPNNGSI++QRP ILVLDD KCH+ E FIA L++ ANT+VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++ AV D ++GKLKPP RG VSTWCKEAW ITP+ VK+ CFKICGLTLALDGSEDHAWC H+FGE LL++Q A W A HP VTLPPL+ P VP G +NP AAQ+EVEGKLLP DS+VE+LE
Sbjct: 124 RPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKS-CFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPYVADESDSEVEVLE 327
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 285 bits (729), Expect = 1.180e-91 Identity = 147/207 (71.01%), Postives = 164/207 (79.23%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLP-TPQGGDSDVELLE 618
RPNNGSI++QRP ILVLDDFKCH+DE FIA L++ ANTIVI IPG LTPLLQPLDRMLNKQMKRLLR YTA++A AV D ++GKLKPP RG VSTWCKEAW TP+ VKT CF ICGLTLALDGSEDHAWC HNFGE Y LL++QRA W A H VTLPPL+ P VP G +NP AAQ+EVEGKLLP DS+VE+LE
Sbjct: 243 RPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKT-CFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPYVADESDSEVEVLE 446
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 290 bits (742), Expect = 1.250e-91 Identity = 147/207 (71.01%), Postives = 164/207 (79.23%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLP-TPQGGDSDVELLE 618
RPNNGSI++QRP ILVLDDF+CH+DE FIA L + NTIVI IPGGLTPL PLDRMLNKQMKRLLRG YTA++A AV D ++GKLKPP RG VSTWCKEAW ITP+ VKT CFKICGLTLALDGSEDHAWC HNFGE Y LL++Q A W A HP VTLPPL+ P VP G +NP AAQ+EVEGKLLP DS+VE+LE
Sbjct: 417 RPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKT-CFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPYVADESDSEVEVLE 620
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 280 bits (716), Expect = 2.250e-91 Identity = 141/194 (72.68%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLPT 582
RPNNGSI++QRP ILVLDDFKCH+DE FIA L++ ANTIVI IPGGLTPLLQPLD LNKQMKRLLRG +TA+++ AV D ++GKLKPP RG VSTWCKE W ITP+ VKT CFKICGLTLALDGSEDHAWC+HNFGE Y LL++Q A W A HP VTLPPL+ P VP G +NP AAQ+EVEGKLLPT
Sbjct: 88 RPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKT-CFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPT 276
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 272 bits (696), Expect = 3.880e-89 Identity = 141/211 (66.82%), Postives = 160/211 (75.83%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLP-TPQGGDSDVELLEDDSD 630
RPNNGSI++QRP ILVLDDFKC +DE FIA L++ ANTI I IPGGLTPLLQPLDR+LNKQMKR+LRG YTA++A AV D ++GKLKPP RG VSTWC EAW I P+ VKT CFKICGLTLALDG EDHAW HNFGE Y LL++Q A W A HP TLPPL+ P VP G NP AQ+EVE KL+P S+VE+LE DSD
Sbjct: 27 RPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKT-CFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGF--DFNPITGAQKEVEEKLMPYVADESASEVEVLEGDSD 234
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 270 bits (690), Expect = 1.860e-84 Identity = 137/204 (67.16%), Postives = 157/204 (76.96%), Query Frame = 1
Query: 1 RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAVTDPKTGKLKPPGRGQVSTWCKEAWAQITPDLVKTTCFKICGLTLALDGSEDHAWCSHNFGEGYPALLQQQRADWEAAHPGVTLPPLQPPVVPEGAAAGTNPFKAAQEEVEGKLLPTPQGGDSDVEL 612
RPNNGSI++QR ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQ LDRMLNKQMKRLL PKTGKL PPGRG V+TWCK AWA ITP+ VKT CFKICGLTLALDGSEDHAWC HNFG+GY LL+QQR +W A HP VTLPPLQ P VP + A N +AA +E+E +LLP +G DSD+E+
Sbjct: 368 RPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKT-CFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTA--NHIEAAAKELEAELLP--RGDDSDIEI 566 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig173.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig173.23.1 >prot_P-littoralis_Contig173.23.1 ID=prot_P-littoralis_Contig173.23.1|Name=mRNA_P-littoralis_Contig173.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=210bp RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLback to top mRNA from alignment at P-littoralis_Contig173:86476..87105+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig173.23.1 ID=mRNA_P-littoralis_Contig173.23.1|Name=mRNA_P-littoralis_Contig173.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=630bp|location=Sequence derived from alignment at P-littoralis_Contig173:86476..87105+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig173:86476..87105+ >mRNA_P-littoralis_Contig173.23.1 ID=mRNA_P-littoralis_Contig173.23.1|Name=mRNA_P-littoralis_Contig173.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=630bp|location=Sequence derived from alignment at P-littoralis_Contig173:86476..87105+ (Pylaiella littoralis U1_48)back to top |