mRNA_P-littoralis_Contig171.59.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig171.59.1
Unique NamemRNA_P-littoralis_Contig171.59.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 3.540e-152
Identity = 201/320 (62.81%), Postives = 253/320 (79.06%), Query Frame = 1
Query:   13 PTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 972
            PTS  A+ FRE FR+P+ FF+ LV L +++ WF  G  DA+GR GIPV+LK+L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+
Sbjct:  108 PTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 3.400e-145
Identity = 207/303 (68.32%), Postives = 238/303 (78.55%), Query Frame = 1
Query:    1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 909
            +LA  T+ AAKVFRERFRVP+ FF  LV+LSR K+WFS G  DAA REGIP+ELK+L      G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:   84 DLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 417 bits (1072), Expect = 3.330e-141
Identity = 192/319 (60.19%), Postives = 240/319 (75.24%), Query Frame = 1
Query:   16 TSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 972
            T+  A+ FR  FRVP+ FF+ LVEL R++ WF  G +D  GR+ +PVELK+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:  125 TTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 3.910e-139
Identity = 189/264 (71.59%), Postives = 218/264 (82.58%), Query Frame = 1
Query:  181 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 972
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 297          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 1.200e-133
Identity = 190/323 (58.82%), Postives = 232/323 (71.83%), Query Frame = 1
Query:    1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAG 963
            +L    S ++K FR  FRVP +FFLRLV L + K WF+  G DAA R+  PVE K+L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+GA+GS DVTH+GW  CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR +  Y ++ + +   DGT  T KGCYL+VDNGYH+W  LM P+KYP   +D  FSK LESVRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNMLH+FDGM    EN  W  SAG
Sbjct:   44 DLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 1.040e-132
Identity = 193/326 (59.20%), Postives = 234/326 (71.78%), Query Frame = 1
Query:    1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 972
            +L  PTS AAK FRE FRVP+ FFLRLVEL ++K WF+    DA GR   PVE K+L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +
Sbjct:   73 DLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 2.740e-126
Identity = 191/352 (54.26%), Postives = 229/352 (65.06%), Query Frame = 1
Query:    1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGL 966
            +L   TS  AK  R  FRVP+  FLRLV L + K WFS    DA G    PVE K+L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKTIV +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDGM    EN +W  SAG+
Sbjct:   31 DLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 5.480e-121
Identity = 167/274 (60.95%), Postives = 207/274 (75.55%), Query Frame = 1
Query:  151 PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 972
            P   ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 2.070e-118
Identity = 175/291 (60.14%), Postives = 203/291 (69.76%), Query Frame = 1
Query:  100 KKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 972
            K W S  G     R G  ++L +L      G+GNCFDD+ QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT GFTGA NDKT++ YD+ V  IR    Y +R+YKLRKA+GTE TR+GC+ IVDNGYHE                            DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI HNMLH+FDG+ +F+EN DW GSAG HD
Sbjct:   82 KNWSSWQGRSGGFRRGRRMQLTVL------GKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHD 338          
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 2.870e-112
Identity = 181/319 (56.74%), Postives = 205/319 (64.26%), Query Frame = 1
Query:  262 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 972
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 564          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE3.540e-15262.81Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE3.400e-14568.32DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JPH7_9PHAE3.330e-14160.19Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE3.910e-13971.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE1.200e-13358.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.040e-13259.20Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE2.740e-12654.26DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE5.480e-12160.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE2.070e-11860.14DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KEB6_9PHAE2.870e-11256.74DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig171contigP-littoralis_Contig171:177933..180322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size972
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.43e-99
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size972
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789829.1262515-CDS-P-littoralis_Contig171:177932..1780971680789829.1262515-CDS-P-littoralis_Contig171:177932..178097Pylaiella littoralis U1_48CDSP-littoralis_Contig171 177933..178097 +
1680789829.1387358-CDS-P-littoralis_Contig171:178945..1794731680789829.1387358-CDS-P-littoralis_Contig171:178945..179473Pylaiella littoralis U1_48CDSP-littoralis_Contig171 178946..179473 +
1680789829.1499836-CDS-P-littoralis_Contig171:180043..1803221680789829.1499836-CDS-P-littoralis_Contig171:180043..180322Pylaiella littoralis U1_48CDSP-littoralis_Contig171 180044..180322 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig171.59.1prot_P-littoralis_Contig171.59.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig171 177933..180322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig171.59.1

>prot_P-littoralis_Contig171.59.1 ID=prot_P-littoralis_Contig171.59.1|Name=mRNA_P-littoralis_Contig171.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=324bp
ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGI
PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFE
EHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTG
KEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKV
YKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAF
SKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNM
LHSFDGMSVFKENVDWAGSAGLHD
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mRNA from alignment at P-littoralis_Contig171:177933..180322+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig171.59.1 ID=mRNA_P-littoralis_Contig171.59.1|Name=mRNA_P-littoralis_Contig171.59.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2390bp|location=Sequence derived from alignment at P-littoralis_Contig171:177933..180322+ (Pylaiella littoralis U1_48)
GAACTTGCCGTGCCCACGTCCGATGCGGCGAAGGTATTCCGAGAGCGCTT TCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAGGGAGA AGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATC CCAGTAGAGCTCAAGGTGCGCTTGAAAATGACACTTCGTACGAAGCATAA CATACTGGAAAATAATATAGATGGTATGTGTACAAGTACAAAATACAGCA GCTTTCCACTGCTGTACGTCACACAACTGCTGTCCACACACCGCCGTCCA CCTCATGACTGCAGCACAACTGCTGCACCTGATGAAAGTCTGCATGCCTT TCGGGGCCGGTATATTTGTGAAGCACTTGCAGCTGTAGGGTATGCGAGAC CAATCAAGTGCGCAACGATTTTTGTGGGTCGGCACGACGAGGACTAGCGA ATGAACTTATTCTGGATAACAAAGTGCCGCAGACGGATATCACCACAGCA GTGTGTGTTGCTGATGCTGCCGAAGATACCGCTGCAGGTTTTTGGGTACT CTTCTGTGCCCCACTCCTGGGTCGGTGGTTATTACGAGGTACTTATATTC CGAACCTTTCTTGATTGGTCGTTTCGGGTCGAGTGGGTGCGGAAACACGG GAATGCAACCATACATGACTGCTGTACTGCTGTAGACTGGCGTGCAGAAT AGATGGGATGGCAACACAACACAACAGTATTTATCACGCTTTCACGTAAA ATAAAACATGCCGTTGCTGCGCCACCACGTGACGCTATTCCGACACAACA GCTGTCACGATGTGTGTATGTGAAAGTCAAAACATCATCCGTAATACGAA ATCATGTATCTGCCTGATTCGTATACACGGACTACTTAAAATGGTAGTTG TCCAGCCGAGCGAATCGGGCAACAGCAACTACTTGACTGATGGACACTCC CGCCCCCCCCTTTTCTCCCCGCCGCCGCGCGCGCTCCCCCTCCCCCCTGA CATTATTCGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACT GCTTCGACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCA GCAACGTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGA GCATATCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCT ACCGCAAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCAC GTCGGTTGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAA GGAGGGGTTTCCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGCC GCGCCATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACG ATCGTCCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTA CAAGGATCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCC GGAAAGGATGCTATTTGATCGTCGACAACGGCTATCACGAGGTGAGTGTA TTGGGGGCGTGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTCCGTG ACGCTTCGGGTTGATGTGAAGCCCGAAAAATACACGCCGGTACACCGAAA GCAGACCAATGCCATATTTGTCGGTACTGGATGAGGATCTTTATGGCATG TCGGCCCCGTGCATCGGGCGTCGACCTTACGCAGCGGCACACCAAGGTGA AAAACGTTTTGCCGCTTCGCGTTCCTTCTATTTGTAGTTGTTTTCGTGCT GGTTCCGTTTGGACGGTTGCGTTCACTTTTTTACATTTCGAGCATACATC ACCCCATTTATAACACCAAAGGTTTTAACAAACAAATCTGCTCAGGGGTG GTCAGATGGCAAATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTG TTGCCCACATGTCGACACGGTTCCTCGTTCCCCCGAGGAGTTTGATCGTG AAAATATGTGCGTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGTAGCTCAC CAGTCGTCCCTTTCGACCCCCCCCCCTGCTACTGTTGTGCCGTCGTGTGC CAAATCAACAGTGGGTCACCCTGATGGCCCCATCGAAGTACCCGGGTGAC GTGGATGACGCGGCCTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGATGT GGAGTGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCC GCCTGGCCTACCACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGC TGCATTCTCCACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAA GGAGAACGTCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig171:177933..180322+

>mRNA_P-littoralis_Contig171.59.1 ID=mRNA_P-littoralis_Contig171.59.1|Name=mRNA_P-littoralis_Contig171.59.1|organism=Pylaiella littoralis U1_48|type=CDS|length=972bp|location=Sequence derived from alignment at P-littoralis_Contig171:177933..180322+ (Pylaiella littoralis U1_48)
GAACTTGCCGTGCCCACGTCCGATGCGGCGAAGGTATTCCGAGAGCGCTT
TCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAGGGAGA
AGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATC
CCAGTAGAGCTCAAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAA
CTGCTTCGACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGG
CAGCAACGTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAG
GAGCATATCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTG
CTACCGCAAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTC
ACGTCGGTTGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGC
AAGGAGGGGTTTCCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGG
CCGCGCCATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGA
CGATCGTCCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTG
TACAAGGATCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCAC
CCGGAAAGGATGCTATTTGATCGTCGACAACGGCTATCACGAGTGGGTCA
CCCTGATGGCCCCATCGAAGTACCCGGGTGACGTGGATGACGCGGCCTTC
TCCAAGATGCTTGAGAGTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCAT
TCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCA
GGGAAGACATCGATAACATCTTCTTCACGTGCTGCATTCTCCACAACATG
CTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAACGTCGACTGGGC
AGGCAGCGCTGGTCTGCACGAC
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