mRNA_P-littoralis_Contig171.11.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE) HSP 1 Score: 334 bits (856), Expect = 1.100e-105 Identity = 171/203 (84.24%), Postives = 182/203 (89.66%), Query Frame = 1
Query: 886 PSSAGAIERDPILKDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPFEEHPEIIDNIYKFVLQKFHNVRMGDFSRRLSENSTLRLSKGELALRQQLRATSAKG------AAPVGGGTDGTDQLASGVVAGSGTVTSEGLDVEMARKMTKSQL 1476
PSSAGAIERDPIL+DMVGEVDARNDPVNGAGLLFPTLAWYEFVFH ENGIYHFLR+PYFLG YLGDL AEILRVVTESSEVR+AWAKCCP+AV PPPFE PEI+D+IYKFVLQKFHNVRMGDF+RRLS+NSTLRLSKGELALRQ LRATSAKG APVGGG DGT +LA GV+AGSGTVT+EGL VE RKMTK QL
Sbjct: 178 PSSAGAIERDPILQDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHVENGIYHFLRDPYFLGTYLGDLSAEILRVVTESSEVRRAWAKCCPSAVAPPPFEAQPEILDDIYKFVLQKFHNVRMGDFARRLSQNSTLRLSKGELALRQNLRATSAKGEATAKGVAPVGGGIDGTSRLAGGVMAGSGTVTNEGLAVETVRKMTKPQL 380
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE) HSP 1 Score: 287 bits (734), Expect = 3.760e-87 Identity = 149/217 (68.66%), Postives = 164/217 (75.58%), Query Frame = 2
Query: 275 LNEYSEQDAAVEVRDDAVENVRAGPRDVALVKKSVTALLDQFPWLQSLWGMVMDLPPTKDMIMISWNYLVDLLAAGRARKPTTRTASTFTLARFETWPDRLRSWINHGSVQEVARTRQGNQGTHYLCCIINLVDE------------ELYRVFVEEREKSNTVALTYPATIHKISPARGRILYYVAGWLLSRVWSHSRRHNIPDQEWDFIVQHNHSP 889
LN +S Q+AAVEVRDDAVEN+RAGPRDVA VKK VTA LD FPWLQS+WGM +D+PPT++MIM SW YLVDLLAAGRARKPTTRTASTFTL+RFE WPDR+R+WINH SVQEVARTRQG+QGTHYL CIIN+VDE ELYRVF+EEREKSNTVALTY IHKIS ARG+ EWDFIVQHNHSP
Sbjct: 2 LNAHSGQEAAVEVRDDAVENLRAGPRDVAQVKKGVTAALDHFPWLQSIWGMGIDIPPTREMIMTSWKYLVDLLAAGRARKPTTRTASTFTLSRFEAWPDRIRTWINHESVQEVARTRQGDQGTHYLRCIINVVDECYGEGVKPISGQELYRVFMEEREKSNTVALTYLTEIHKISTARGK-------------------------EWDFIVQHNHSP 193
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE) HSP 1 Score: 135 bits (339), Expect = 3.150e-30 Identity = 69/148 (46.62%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 889 SSAGAIERDPILKDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPFEEHPEIIDNIYKFVLQKFHNVRMGDFSRRLSENSTLRLSKGELALRQQLRA 1332
SS AI + +L+D V VD +ND NG GLL+PT+ W EFV+ E GI+HFL+NP FL A LG LPAEI +VV+E+ V++ W CCP PP + P + ++ F + K +VRMGD+++ ++EN+ L+ +K L LRQQL A
Sbjct: 221 SSREAIFTNVMLRDFVAGVDQKNDLKNGPGLLYPTMDWVEFVYAVERGIFHFLKNPIFLAACLGGLPAEIFKVVSEAEVVKEMWGNCCPPG--PPAID--PSVSQEMFLFEVGKILDVRMGDYAKSVTENTFLKFTKAALGLRQQLNA 364
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: D7FVM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM7_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.760e-29 Identity = 60/122 (49.18%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 889 SSAGAIERDPILKDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPFEEHPEIIDNIYKFVLQKFHNVRMGD 1254
S+ A+E+D L+ +VGEV R+D +NGAGLLF T ++EF + E G +H L P+ LGAYLGDLP E LRVV E++ VR AWA+CCP + FE ++ ++ F++QK+HN RMGD
Sbjct: 240 SAGAAVEKDKELEHLVGEVKRRHDEINGAGLLFATKVFFEFTYALEIGYFHILSKPFLLGAYLGDLPGETLRVVREATAVRDAWAECCPPSSGSVNFEWDSKVAHEVFLFIVQKWHNCRMGD 361
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5JA88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA88_9PHAE) HSP 1 Score: 125 bits (313), Expect = 8.620e-29 Identity = 63/97 (64.95%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 889 SSAGAIERDPILKDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPF 1179
SSA AIE D L ++V VD R D NGAGLLF +L +Y FV ENG YH L PY+LG YLGDLPA LRVV+ES EV+ AWAKCCPAAV+PPPF
Sbjct: 150 SSAAAIETDAHLSNLVAGVDKRIDLKNGAGLLFVSLDFYNFVLMLENGYYHVLHQPYYLGPYLGDLPAGPLRVVSESEEVKDAWAKCCPAAVEPPPF 246
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5JX42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX42_9PHAE) HSP 1 Score: 121 bits (304), Expect = 3.080e-27 Identity = 63/148 (42.57%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 889 SSAGAIERDPILKDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPFEEHPEIIDNIYKFVLQKFHNVRMGDFSRRLSENSTLRLSKGELALRQQLRA 1332
SS A+ + +L+D V VD +ND NG G L+PT+ W EFV+ E GI+HFL+ FL A LG LPA+I +VV E+ V+ W CCP PP + P + ++ F + K +VR+GD+++ ++EN++L+ +K L LRQQL A
Sbjct: 82 SSREAMFTNVMLRDFVAGVDHKNDLKNGPGRLYPTMDWVEFVYAVERGIFHFLKKLIFLAAGLGGLPAQIFKVVREAEVVKDMWGNCCPPG--PPAID--PSVSQEMFLFEVGKILDVRVGDYAKSVTENTSLKFTKAALGLRQQLNA 225
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5K7M3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M3_9PHAE) HSP 1 Score: 122 bits (305), Expect = 7.360e-27 Identity = 73/188 (38.83%), Postives = 105/188 (55.85%), Query Frame = 2
Query: 362 LVKKSVTALLDQFPWLQSLWGMVMDLP---PTKDMIMISWNYLVDLLAAGRARKPTTRTASTFTLARFETWPDRLRSWINHGSVQEVARTRQG-NQGTHYLCCIINLVDEELYR----VFVEEREKSNTVALTYPATIHKISPARGRILYYVAGWLLSRVWSHSRRHNIPDQEWDFIVQHNHSPPVRA 901
+VK T L + +P L LW + D+ PT +I+ W LVDLLA+ K +T+ A+ FT+ARF+ W LR W++ +Q V Q +G H LC +IN VDE R + + +N + TYP T +S R R+LYY+AGW+LS++ +H RRHNI + EW +IV + P RA
Sbjct: 12 VVKAVDTVLGEWYPHLLPLWATLTDVNNFGPTIKVILDEWKALVDLLASTCKGKRSTKEATKFTVARFQRWEGTLRGWMSDDVIQRVMFGLQSVERGKHELCGVINQVDEVNLRRLGGLAENKLRDANVITPTYPRTQVALSIPRRRLLYYIAGWVLSKIVTHVRRHNIQEIEWMWIVDRHKYPSKRA 199
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5KKY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY9_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.300e-24 Identity = 69/162 (42.59%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 931 MVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPFEEHPEIIDNIYKFVLQKFHNVRMGDFSRRLSENSTLRLSKGELALRQQLRATSAKGAAPVGGGTDGTDQLASGVVAGSG 1416
+ +VD++ND NG+GLL+PT+ W EF + E GI+HFL+ P FL A LGDLPAEI++VV+E+ V++ W CCP PP + P + + FV+ K NV + + EN++L SK ALRQQL A P GG G+ + A GV G G
Sbjct: 65 LAAKVDSKNDMKNGSGLLYPTVEWVEFKYAVERGIFHFLKKPIFLAACLGDLPAEIVKVVSEAEVVKEMWGNCCPPG--PPAID--PSVSQEKFIFVVGKILNV-----GKSVRENTSLMFSKAAPALRQQLNAR----VGPNGGAGAGSGE-AKGVPQGDG 212
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: D7G5R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R0_ECTSI) HSP 1 Score: 108 bits (269), Expect = 1.690e-22 Identity = 50/108 (46.30%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 889 SSAGAIERDPILKDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPFEEHPEIIDNIY 1212
S A+E+D L+ +VGEV RND +NGAGLLF T A++EF + +E G +H L P+ LGAYL LP ++LRVV+E++E+R AWA+CCP + FE ++ ++
Sbjct: 182 SEGAAVEKDKELEHLVGEVKRRNDEINGAGLLFATKAFFEFTYASEIGYFHILSKPFLLGAYLVGLPGDMLRVVSEATEIRDAWAECCPPSSGSVNFEWDSKVAHEVF 289
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Match: A0A6H5K3B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B5_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 5.840e-20 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 1012 VFHAENGIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPPPFEEHPEIIDNIYKFVLQKFHNVRMGDFSRRLSENSTLRLSKGELALRQQLRA 1332
V+ E GI+HFL NP FL A LG+LPAEI +VV+ES V++ W CCP PP + P + ++ F + K +VRMGD+++ + EN++L+ +K L LRQQL A
Sbjct: 44 VYVVERGIFHFLENPIFLAACLGELPAEIFKVVSESEVVKEMWGNCCPPG--PPAID--PSVSQEMFLFEVGKILDVRMGDYAKSVPENTSLKFTKAALGLRQQLNA 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig171.11.2 >prot_P-littoralis_Contig171.11.2 ID=prot_P-littoralis_Contig171.11.2|Name=mRNA_P-littoralis_Contig171.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=302bp MDPNTLRDVVSGSKEGSGPSPVKPRDVFMGVDSPAEDSDDRAHGGDSPTPback to top mRNA from alignment at P-littoralis_Contig171:72623..75271+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig171.11.2 ID=mRNA_P-littoralis_Contig171.11.2|Name=mRNA_P-littoralis_Contig171.11.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2649bp|location=Sequence derived from alignment at P-littoralis_Contig171:72623..75271+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig171:72623..75271+ >mRNA_P-littoralis_Contig171.11.2 ID=mRNA_P-littoralis_Contig171.11.2|Name=mRNA_P-littoralis_Contig171.11.2|organism=Pylaiella littoralis U1_48|type=CDS|length=906bp|location=Sequence derived from alignment at P-littoralis_Contig171:72623..75271+ (Pylaiella littoralis U1_48)back to top |