mRNA_P-littoralis_Contig17.42.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: A0A1R3HQ96_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HQ96_9ROSI) HSP 1 Score: 194 bits (493), Expect = 1.090e-56 Identity = 120/283 (42.40%), Postives = 171/283 (60.42%), Query Frame = 1
Query: 22 VGTVKRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGGHN--FHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRVEVTKEVFKKKVVEAIIPAIKACW 864
+ T +NLT ++ LLK SK+G L KG L + F P+TI R+WK + G + N+ +K GRK I L+ + ++ IP++ RT IR +A AL + +ST+ +K+ +RA S +KP LTD NK RLE L + + G + F + VHIDEKWF++ + ++YYL +E+ P R + K ITKVMFLAAVARPRFD S N F+GK+GIFPF + A+R S+NR AGT+ETK + VTK+V + ++E I+PAIK+ W
Sbjct: 10 ISTKHSRNLTNQQRQTIYEMLLKQSKDGVLSKGSLTSLATMFSVSPKTIGRIWKQAKLCMENGLI-VNVSSKLTGNVGRKKI-LIDPRK-VSEIPLRRRTNIRSIAKALNMSKSTVHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRTCKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKW 289
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: A0A6P6TEQ3_COFAR (uncharacterized protein LOC113700698 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TEQ3_COFAR) HSP 1 Score: 197 bits (502), Expect = 5.230e-56 Identity = 120/290 (41.38%), Postives = 177/290 (61.03%), Query Frame = 1
Query: 1 MSASGNVVGTVKRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSA-GGGHNFHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRV-EVTKEVFKKKVVEAIIPAIKACW 864
++AS N +K+KN TT+ KRA LLK +NGKL KG + RV E F +++SR+W + A PNL K ++ GRK I V+++ + IP + RT IR +A AL + +S+L +K+ LR S +KP L+ +K ARL+ L +S +F + D +HIDEKWFY+ + Q+YYL+ E P R + K + K+MFLAAVARPR+D + N+ F GK+GI+PF + A+RNS+NR AGTLETK + +TK+V + ++E ++PAI+ W
Sbjct: 81 IAASENTRQPMKKKNFTTALKRAIYEMLLKECENGKLSKGVISRVAECFDISTRSVSRIWHEGKCTATAYGHLPNLSPKLVKRVGRKKIQ-VNLED-IKDIPFRRRTNIRSLAKALDVSKSSLHRRIKEESLRPHSNPVKPYLSTDSKKARLQFCLSMISEGTLASKFSFDNMHDRIHIDEKWFYMSKTSQRYYLHPLEHEPYRTCKSKRFVPKLMFLAAVARPRYDITLNKQFNGKIGIWPFVFKEPAKRNSKNRTAGTLETKPILSITKDVIRSCLIEKLLPAIREKW 368
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: UPI000CD9BE6A (uncharacterized protein LOC111905831 n=2 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9BE6A) HSP 1 Score: 193 bits (490), Expect = 2.640e-55 Identity = 117/285 (41.05%), Postives = 175/285 (61.40%), Query Frame = 1
Query: 16 NVVGTVKRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGGHN-FHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRV-EVTKEVFKKKVVEAIIPAIKACW 864
N + ++ +K+ T + + LL+ + NG+L +G + V F +T+SR+W Q + G + + +K+ + GRK + L Q ++ IP++ RTTI+ +A +LGI +STL +K+ LR + +KP LTD NKT RLE L ++ S + FH + +HIDEKWFYI ++ ++YYL E+ P R + K ITKVMFLAAVAR RFD+ N F GK+GIFP T + A+R+S+NR AGTLETK + VTKE+ + ++E ++PAIKA W
Sbjct: 3 NTLTSLTKKHTTYAQCQDIFQALLQHNSNGELRRGSINDVAALFGVSKRTVSRIWNRAKLQVENGSI-IDFSSKKLKVVGRKRVQLDLNQ--VSQIPLRRRTTIQSIAKSLGIVKSTLHRRIKEGDLRPRTNAIKPDLTDANKTKRLEFCLSMITRSLPESNTTFHDMFNVIHIDEKWFYISRSSKRYYLVPGEDEPLRTCKSKKFITKVMFLAAVARLRFDALGNEIFFGKIGIFPLTTKEPAKRSSKNRVAGTLETKPILSVTKEITRSWLIEKVLPAIKAKW 284
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: A0A6A4ZBD2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBD2_9STRA) HSP 1 Score: 193 bits (490), Expect = 7.860e-55 Identity = 111/272 (40.81%), Postives = 167/272 (61.40%), Query Frame = 1
Query: 43 NLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVS-IQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLG-LRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGGHNFHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRVEVTKEVFKKKVVEAIIPAI 852
+LT + +RAA LL+ S NG+L G LK V F+ H +TISR+WK G ++D+K K SGRK L + A+ +P R T+R +AA G+P++++ ++++ L++ + Y+KP+LT+ N ARL+ +V G H F ++VH+DEKWFY+ + +K+Y+Y DEEV R V+ K ITKVMFLAAVARP++D +RN F GK+G++PF A+RNS+NRA G V +V+KK +++ +IPAI
Sbjct: 11 HLTPTERRAAYELLLQSSTNGRLKYGALKEVATYFKCHWKTISRVWKRGRLSLSDGSPHADVDSKLKGNSGRKKSRLADDFEGAIKAVPQHQRQTLRSLAAHCGLPKTSIVRHMQETKRLKSRASYVKPMLTEDNTKARLDFAKSFVRLLPSGNHAFVDMNEYVHVDEKWFYLTRVKRKFYVYDDEEVALRAVKSKQFITKVMFLAAVARPQYDHTRNAYFDGKVGVWPFVVVEPAKRNSKNRAKGAPVVVPQVVDGKVYKKAIIDKVIPAI 282
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: UPI0012635B1A (uncharacterized protein LOC116110731 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012635B1A) HSP 1 Score: 192 bits (489), Expect = 1.350e-54 Identity = 111/284 (39.08%), Postives = 169/284 (59.51%), Query Frame = 1
Query: 31 VKRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGGHN-----FHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRVE-VTKEVFKKKVVEAIIPAIKACW 864
V RKNLT ++A LLK S NG+L K V + F +T+ R+W+ K+ + + N+ +++ GRK +++ Q IP++ RT++R ++A + +TLF LK+ +R S +KPLL N AR+ L + G+N F E+ +H+DEKWFY+ + +KYYL DE+ P R + K+ ITKVMFLAAV RPRFD S N F+GK+GIFPF + ARR+S+NR+AGT+ETK + + KE+++ ++E ++PAI+ W
Sbjct: 39 VSRKNLTNEQRQAIFESLLKRSVNGQLKKNTTSEVAQLFSVSMRTVQRIWQ-RGKENEVLDSSTNVSSRKALNCGRKRLEIDVSQ--FRNIPLRRRTSLRSLSAVTNLSVTTLFRRLKEGSIRRHSNAIKPLLNVENMKARIRFCLSMIEH----GNNPSCLRFVTMENIIHVDEKWFYMTKQSEKYYLLPDEDEPLRTCKSKTFITKVMFLAAVTRPRFDESGNELFSGKIGIFPFINKEPARRSSKNRSAGTMETKTINSINKEIYRSYIIEKLLPAIRDKW 315
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS) HSP 1 Score: 191 bits (485), Expect = 3.210e-54 Identity = 117/282 (41.49%), Postives = 172/282 (60.99%), Query Frame = 1
Query: 34 KRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAG---EVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVS-SSAGGGHNFHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRV-EVTKEVFKKKVVEAIIPAIKACW 864
+++NLT +R + L S +GKL +G LK V + P+T+ ++ + N G +V PNL + + GRK + L + +A +P RT IR +A AL +PR+T+ +K +R + LKP L++ K ARL+ L + SS F + ++VHIDEKWF++ + ++YYL E P R + K ITKVMFLAAVARPRFD++RN+ F+GK+GIFPFT + A+R S+NR AGTLETK V VTKE+ +K ++E ++PAI+A W
Sbjct: 14 EKRNLTDQQRREILEILFSKSASGKLKRGCLKEVAAMYSVDPRTVRQIVQKANSCIAKGLTVDVSPNL----RGRVGRKRVQLDLNK--IAALPYSQRTNIRSIAEALEVPRTTIHRRVKDGVMRPHTNPLKPCLSEEGKRARLQFCLSMLEPSSLQSQPTFKNMYNYVHIDEKWFFMTKESERYYLLPHENEPLRTCKSKHFITKVMFLAAVARPRFDTTRNQEFSGKIGIFPFTYKEPAKRTSKNRVAGTLETKVVVSVTKEIIRKCLIEKVLPAIRAKW 289
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: UPI001CB8D7AC (uncharacterized protein LOC122583467 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D7AC) HSP 1 Score: 192 bits (488), Expect = 2.960e-53 Identity = 120/284 (42.25%), Postives = 170/284 (59.86%), Query Frame = 1
Query: 16 NVVGTVKRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGGHNFHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRV-EVTKEVFKKKVVEAIIPAIKACW 864
N+ + +KNLT + ++ L++ +GKL G LK V F TISR+W D Q G + ++ +K GRK I + Q ++ IP++ RT IR +A A+ + +ST+ +K+ LR + +KP LTD NK ARLE L V+ S FH + +HIDEKWFY+ + ++YYL +E P R + K ITKVMFLAAVARPRFD+S N F+GK+GIFPFT A+R+S+NR AGTL TK + VTKEV + + E ++PAI++ W
Sbjct: 183 NLTNSQGKKNLTNNQRQIIYKMLMQQIVDGKLQHGTLKHVATLFSVSKWTISRIWHDAKLQLQHGSL-VDVSSKMANVVGRKRIQIDYAQ--VSQIPLRRRTNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVTRSL----TFHDMFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLNEKVLPAIRSKW 459
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: A0A6A4ZEB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEB5_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.170e-53 Identity = 112/272 (41.18%), Postives = 162/272 (59.56%), Query Frame = 1
Query: 43 NLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRK-GIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDN-LKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGGHNFHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRVEVTKEVFKKKVVEAIIPAI 852
NL S +RA +L+ S G L +G + + + + TI R+WK + + G+ N+ +K + SGRK + I+AA+ +P R T+R VAA++ IP +TL + + + A S +LKP LTD N RLE + ++ S G F D VH+DEKWFY+ +N YY+Y DE + R VQ KSHITKVMFLAAVARPR+D +R F GKLG++PF A+R+S+NR GT+ETK V VT +V++ + + ++PAI
Sbjct: 28 NLRDSERRALFERMLEISSRGVLPRGAIVNLAREIGRDRATIMRVWKRGLETRKDGDGAANVASKIRGNSGRKVQRERSDIEAAIRAVPHARRRTLRSVAASVVIPLTTLHRHKMSEPRFSAKSNWLKPRLTDANIKLRLEFAMSFLRSGPGDRQVFSDMHDIVHVDEKWFYLTKNKSVYYIYDDEVLAIRSVQSKSHITKVMFLAAVARPRYDFARREMFDGKLGVWPFVVDEPAKRSSKNRPKGTIETKPVSVTADVYQAMMFDKVLPAI 299
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 187 bits (476), Expect = 5.600e-53 Identity = 116/281 (41.28%), Postives = 166/281 (59.07%), Query Frame = 1
Query: 28 TVKRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGG-HNFHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRV-EVTKEVFKKKVVEAIIPAIKACW 864
T +KN T + A LL+ S +G+L +G + V QF +T+SR+W Q + G + L + + GRK + + Q + IP++ R+ IR +A L + +ST+ +K+ LR + +KP LT NK ARLE L +S S FH + +HIDEKWFY+ + ++YYL E+ P R Q K ITKVMFLAAVARPRFD+S N F+GK+GI+PFT A+R+S+NR AGTLETK + VTKEV + ++E ++P I+A W
Sbjct: 7 THTKKNTTVEQRHAIYEALLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHG-LPVVLSSNMAKVVGRKRVQVDFNQ--VLDIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKW 284
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663) HSP 1 Score: 187 bits (474), Expect = 6.200e-53 Identity = 113/256 (44.14%), Postives = 157/256 (61.33%), Query Frame = 1
Query: 100 NGKLGKGDLKRVGEQFQQHPQTISRLWKDYNKQKDAGEVDPNLDNKRKQKSGRKGIDLVSIQAALAGIPIKNRTTIRGVAAALGIPRSTLFDNLKKLGLRAASRYLKPLLTDGNKTARLERVLRWVSSSAGGGHNFHHFEDFVHIDEKWFYICQNGQKYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQRGARRNSRNRAAGTLETKRV-EVTKEVFKKKVVEAIIPAIKACW 864
+GKL G LK V F +TISR+W D Q G + ++ +K GRK I + Q ++ IP++ R IR +A A+ + +ST+ +K+ LR + +KP LTD NK ARLE L V+ S FH + +HIDEKWFY+ + ++YYL +E P R + K ITKVMFLAAVARPRFD+S N F+GK+GIFPFT A+R+S+NR AGTL TK + VTKEV + ++E ++PAI++ W
Sbjct: 8 DGKLQHGTLKHVATLFSVSKRTISRIWHDAKLQLQHGSL-VDVSSKMANVVGRKRIQIDYAQ--VSQIPLRRRKNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVTRSL----TFHDIFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKW 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.42.1 >prot_P-littoralis_Contig17.42.1 ID=prot_P-littoralis_Contig17.42.1|Name=mRNA_P-littoralis_Contig17.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp MSASGNVVGTVKRKNLTTSGKRAAIAELLKGSKNGKLGKGDLKRVGEQFQback to top mRNA from alignment at P-littoralis_Contig17:190392..191261+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.42.1 ID=mRNA_P-littoralis_Contig17.42.1|Name=mRNA_P-littoralis_Contig17.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig17:190392..191261+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:190392..191261+ >mRNA_P-littoralis_Contig17.42.1 ID=mRNA_P-littoralis_Contig17.42.1|Name=mRNA_P-littoralis_Contig17.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig17:190392..191261+ (Pylaiella littoralis U1_48)back to top |