mRNA_P-littoralis_Contig17.37.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 112 bits (280), Expect = 9.390e-28 Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIGATSIDG 171
AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIGATS DG
Sbjct: 53 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIGATSTDG 109
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5KDP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP2_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 7.430e-14 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSE-LTMKRIGATSIDGGE 177
AVKRNAG+V TEAK AAA+GY++IAVPGFF+W ++N I LT + +G TS++GG+
Sbjct: 53 AVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNGGQ 112
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5KFI6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI6_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 4.110e-13 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSE-LTMKRIGATSIDGG 174
AVKRNAG+V TEAK AAA+GY++IAVPGFF+W ++N I LT + +G TS++GG
Sbjct: 101 AVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNGG 159
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5JZP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP4_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 4.740e-13 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSE-LTMKRIGATSIDGGE 177
AVKRNAG+V TEAK AAA+GY++IAVPGFF+W ++N I LT + +G TS++GG+
Sbjct: 53 AVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNGGK 112
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5JXZ8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ8_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 2.290e-12 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDN----DITFPSELTMKRIGATSIDGG 174
AVKRNAG+V T+AK AAA QGY++IAVPGFF+W ++N D LT + +G TS+ GG
Sbjct: 54 AVKRNAGIVSTQAKHAAAPQGYKDIAVPGFFKWLQENLDKEDFFLQLWLTFEVMGKTSMKGG 115
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5JUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY9_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 4.730e-12 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSE-LTMKRIGATSIDG 171
AVKRNAG+V TEAK AAA+GY++IAVPGFF+W ++N I LT + +G TS++G
Sbjct: 53 AVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5JJR6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR6_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 9.120e-12 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDN---DITFPSE-LTMKRIGATSIDGGE 177
AVKRNAG+V T+AK AA A+GY++IAVPGFF+W ++N D F LT + +G TS+ GG+
Sbjct: 55 AVKRNAGIVSTQAKHAAVAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFEVMGRTSMSGGQ 117
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5JF32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF32_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 4.960e-11 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDN----DITFPSELTMKRIGATSIDG 171
AVKRNAG+V T+AK A AAQGY++IAVPGFF+W ++N D LT + +G TS+ G
Sbjct: 54 AVKRNAGMVFTQAKHATAAQGYKDIAVPGFFKWLQENLDKEDFFLQPWLTFEVMGKTSMKG 114
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5JPS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS0_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 6.250e-11 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDN----DITFPSELTMKRIGATSIDGG 174
AVKRNAG+V T+AK AAAAQGY++IAVP FF+W ++N D LT + +G TS+ GG
Sbjct: 450 AVKRNAGIVSTQAKHAAAAQGYKDIAVPSFFKWLQENLDKEDSFLQPWLTFEVMGKTSMKGG 511
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Match: A0A6H5KBX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBX2_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.930e-9 Identity = 27/37 (72.97%), Postives = 34/37 (91.89%), Query Frame = 1
Query: 1 AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDN 111
AVKRNAG+V T+AK AAAAQGY++IAVPGFF+W ++N
Sbjct: 32 AVKRNAGIVSTQAKHAAAAQGYKDIAVPGFFKWLQEN 68 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.37.1 >prot_P-littoralis_Contig17.37.1 ID=prot_P-littoralis_Contig17.37.1|Name=mRNA_P-littoralis_Contig17.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=62bp AVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIback to top mRNA from alignment at P-littoralis_Contig17:128647..128832- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.37.1 ID=mRNA_P-littoralis_Contig17.37.1|Name=mRNA_P-littoralis_Contig17.37.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=186bp|location=Sequence derived from alignment at P-littoralis_Contig17:128647..128832- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:128647..128832- >mRNA_P-littoralis_Contig17.37.1 ID=mRNA_P-littoralis_Contig17.37.1|Name=mRNA_P-littoralis_Contig17.37.1|organism=Pylaiella littoralis U1_48|type=CDS|length=186bp|location=Sequence derived from alignment at P-littoralis_Contig17:128647..128832- (Pylaiella littoralis U1_48)back to top |