mRNA_P-littoralis_Contig17.32.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 270 bits (689), Expect = 3.810e-86 Identity = 162/179 (90.50%), Postives = 163/179 (91.06%), Query Frame = 1
Query: 1 KPDQEGEKGKTAVIKKERNPDDDDVSVDDDDVPSXXEQAGDDGDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXX------ESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTL 519
KPDQEGEKGKTAVIKKERNPDDDD SV VPS EQAGDDG+YPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKR XXXXXXXXXXXX ESETE GGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTL
Sbjct: 211 KPDQEGEKGKTAVIKKERNPDDDDASVXXXXVPSEDEQAGDDGEYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRKSXXXXXXXXXXXXXXXSTGESETEPGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTL 389
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: D7FSK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK1_ECTSI) HSP 1 Score: 107 bits (267), Expect = 6.410e-25 Identity = 62/115 (53.91%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 124 DGDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXXESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFR 468
DG YP RPD WMHP LL YC IGRPS SEDPDL T RKTSGP RG K+ ES +E+ G +D +L+S AIR FAGAGE +SRAQV+K+ V + A E R
Sbjct: 132 DGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSD---ESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQAR 243
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5KXV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXV2_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.830e-22 Identity = 60/120 (50.00%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 127 GDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXXESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQ 486
G YP RP+ WMHP LL C +GRPS SEDPDL TARKTSGP RG K+ S +E+ G ++ +L+S+AIR FAG GE QSRAQV+K+ A V + A E Q R Q
Sbjct: 117 GGYPDRPNKWMHPYLLTCCLVGRPSSSEDPDLRTARKTSGPKGRGGKQKAKKGSPSTSDG---SGSETSGAYTEVDLSSSAIRMFAGGGEIQSRAQVKKEHAAVAAANAQEQAEQARRVQ 233
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5JWP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP9_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.120e-22 Identity = 62/132 (46.97%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 124 DGDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXXESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTL 519
DG YP R + WMHP LL YC IGRPS SEDPDL TARKTSGP R K+ S +E+ G ++ L+S+AIRTFAGA E QSRAQV+ + V + A E R+ + A ++ AV+ L
Sbjct: 91 DGGYPDRSNKWMHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRAGKQKAQKESPSTSDG---SGSETSGAYTEVGLSSSAIRTFAGADEIQSRAQVKNEHTAVAAANAQEQARRVQQAHTGKLVTAVEAL 219
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5KPB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB5_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 7.910e-21 Identity = 62/132 (46.97%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 124 DGDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXXESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTL 519
DG P RP+ WMHP LL YC IGRPS SEDPDL TARKTSG RG K+ S +E+ G ++ +L+S+AIR FAG GE QSRAQ++K+ A V + A E R+ + A ++ AV L
Sbjct: 77 DGGCPDRPNKWMHPYLLTYCLIGRPSSSEDPDLRTARKTSGLKGRGGKQNAKKGSPSTIDG---SGSETSGAYTEVDLSSSAIRMFAGTGEIQSRAQMKKEHAVVAAANAQEQARRVQQAHTGKLVTAVGAL 205
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5JU95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU95_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 2.660e-20 Identity = 56/104 (53.85%), Postives = 66/104 (63.46%), Query Frame = 1
Query: 157 MHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXXESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFR 468
MHP LL YC IGRPS SEDPDL TARKTSGP RG K+ S +E+ G +D +L+S+AIR FAGAGE QSRAQV+K+ A V + A E R
Sbjct: 1 MHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKAKKGSPSTSDG---SGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQAR 101
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5K3M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M7_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.670e-19 Identity = 59/121 (48.76%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 157 MHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXXESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTL 519
MHP LL YC IGRPS SEDPDL TARKTSGP RG K+ S +E+ G +D +L+S+AIR FAGAGE QSRAQV+K+ A V + A E + + A ++ AV+ L
Sbjct: 1 MHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKVKNGSPSTSDG---SGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQAPRVQQAHTGKLVTAVEAL 118
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5JGS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS6_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 5.660e-17 Identity = 56/127 (44.09%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 124 DGDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXXESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQ-GDQIT 501
DG+YP R + WMHP LL YC IGR S SEDP+L TARKT G S + + G ++ +L+S+AIR FAGAG+ QSRAQV+K+ A V + A E R+ + A G Q+T
Sbjct: 193 DGEYPDRGNKWMHPYLLTYCLIGRASSSEDPELRTARKTDG-----------------------SGSRTSGAHTEVDLSSSAIRMFAGAGKIQSRAQVKKEYAAVAAANAQEQVRRVQQAHTGKQVT 296
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5KF57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF57_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 3.420e-16 Identity = 58/117 (49.57%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 67 DDVSVDDDDVPSXXEQAGDDGDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXX-----ESETESGGVGSDGNLTSTAIRTFAGAGEPQ 402
DD + DD PS E + ++G +P RP+ WMH LL +C IGRP SEDPDL TARKTSGP RG+ XXXXXX ES +E+ G ++ +L+S AIR F GAGE Q
Sbjct: 151 DDTPGNGDDAPSE-EISREEGGFPQRPNKWMHQYLLTFCLIGRPCSSEDPDLRTARKTSGPKGRGASXXXXXXXKQKAKKASSGTSDESGSEASGAYTEVDLSSNAIRIFTGAGEIQ 266
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Match: A0A6H5KBX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBX2_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.020e-15 Identity = 57/114 (50.00%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 88 DDVPSXXEQAGDDGDYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRXXXXXXXXXXXXXX-----ESETESGGVGSDGNLTSTAIRTFAGAGEPQSRAQ 414
DD PS E ++G +P RP WMH LL +C IGRP SEDPDL TARKTSG RG+ XXXXX ES +E+ G ++ +L+S AIR F GAGE QS+AQ
Sbjct: 174 DDAPSE-EITREEGGFPQRPKKWMHQYLLTFCLIGRPCSSEDPDLRTARKTSGAKGRGAXXXXXXXGKQKAKKGSPGTSDESGSEASGAYTEVDLSSNAIRMFTGAGEIQSQAQ 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.32.1 >prot_P-littoralis_Contig17.32.1 ID=prot_P-littoralis_Contig17.32.1|Name=mRNA_P-littoralis_Contig17.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=173bp KPDQEGEKGKTAVIKKERNPDDDDVSVDDDDVPSEDEQAGDDGDYPPRPDback to top mRNA from alignment at P-littoralis_Contig17:124916..125435- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.32.1 ID=mRNA_P-littoralis_Contig17.32.1|Name=mRNA_P-littoralis_Contig17.32.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=520bp|location=Sequence derived from alignment at P-littoralis_Contig17:124916..125435- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:124916..125435- >mRNA_P-littoralis_Contig17.32.1 ID=mRNA_P-littoralis_Contig17.32.1|Name=mRNA_P-littoralis_Contig17.32.1|organism=Pylaiella littoralis U1_48|type=CDS|length=519bp|location=Sequence derived from alignment at P-littoralis_Contig17:124916..125435- (Pylaiella littoralis U1_48)back to top |