mRNA_P-littoralis_Contig17.228.20 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE) HSP 1 Score: 276 bits (705), Expect = 2.050e-73 Identity = 172/378 (45.50%), Postives = 236/378 (62.43%), Query Frame = 1
Query: 442 RAEEHARLQP--------MFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDT-IATSCAKTKNTHNAAGVGWGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSRVS-APSHDGVVQQLAAELEALKAAMKSV---EDKHHAEL 1536
R+ EHA L P +FRVQ++S A D L REN E L++I ++++ PAAG + E++D ++ ++L LV MAK LG+VA H ED D+QRKE+ L P KAYY A+RSGLCNAY AASV+ S VST K G MGK GTA L+S AVP++ +A AG AL+ GD +QTRR+VKIT +A D +EC LA+ LAL+LTDGL DDT + A TH AG+ G D + E+D E+ +EE A E S+ G G+RLGK+HL KLL A+ + CL G++ +K+ L+L IL GAD R +ETS+ + + VRS + AP+HDG + +A ++ AL+AA++ + +DK AEL
Sbjct: 418 RSPEHASLSPEKAEEVDRLFRVQLSSSAGFDSLIRENPEALEDIHRVIKAPAAGSLDFVDEISDMERRRKLGTLVNMAKALGEVALSHTEDMDVQRKELALTPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTCKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYERSDHG----------GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTPKKVIVRSPPALAPTHDGRLPSMA-DIAALQAAVEVLTLAKDKQRAEL 784
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 271 bits (693), Expect = 7.080e-73 Identity = 181/422 (42.89%), Postives = 243/422 (57.58%), Query Frame = 1
Query: 337 TDGPDNNESLSAWRSRL----QAELVEKKPAEQE--------------RTEQSRAE------EHARLQPMFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIATS-CAKTKNTHNAAGVGW---GXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSRVSAPSHDGVVQQLAAELEALKAAMKSVED 1518
T GP ESL +WR+RL QA + E AE +T+++ E A + M + Q++SF+ L L + + L++++QL+E GT L++ L EL++LV MA+ LGD+ SRH+ +EDIQR+E+ L P PKAYY AIR+GLCNAY AASVV S LV TSK G MG AG + +S AVP+V +A A AALKAGD +QTRRV KI D+APD+ +C LA++LAL+L+DG D T+ T+ A+ + +H AG+G G GA D +EE M+WFVEE A E +N A VQAGR+LGK+HL LL AVG+DCL+GTN EKV LV +IL A+ R TS+ + R R + HD Q A+ A +V D
Sbjct: 340 TGGPTRGESLDSWRARLRQQEQAAVREDTKAENPAARTSSSTQGDKPGKTDRATTEPISGSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVT-----RERTN---HDASSAQPASRQSHAAATRPAVPD 753
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 269 bits (687), Expect = 2.910e-71 Identity = 168/377 (44.56%), Postives = 232/377 (61.54%), Query Frame = 1
Query: 442 RAEEHARLQP--------MFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDT-IATSCAKTKNTHNAAGVGWGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSRVS-APSHDGVVQQLA--AELEALKAAMKSVEDKHHAEL 1536
R+ E+A L P +FRVQ++S A LD L +EN E L++I+++++ PAAG EL+D ++ ++L L+ MAK LG+VA H ED+D+QRKE+ L P KAYY A+RSGLCNAY AASV+ S VSTSK G MGK GTA L+S AVP++ +A AG AL+ GD +QTRR+ KIT +A D +EC LA+ LAL+LTDGL DDT + TH AG+ G L D + E+D E +EE A E S+ G G+RLGK+HL KLL A+ + CL G++ +K+ L+L IL AD R +ETS + + + V+S + AP+H+G + +A A L+A A+ S +D AEL
Sbjct: 458 RSPENASLSPGKAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSDHG----------GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISPKEVIVQSPPALAPTHNGTLPSMADIAALQAAVEALTSAKDMQRAEL 824
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 267 bits (683), Expect = 1.350e-70 Identity = 177/420 (42.14%), Postives = 241/420 (57.38%), Query Frame = 1
Query: 343 GPDNNESLSAWRSRL--QAELVEK-------------------KPAEQERTEQ---SRAEEHARLQPMFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIATS-CAKTKNTHNAAGVGW---GXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSRVSAPSHDGVVQQLAAELEALKAAMKSVED 1518
GP +ESL +WR+RL Q + E+ KP + +R S + A + M + Q++SF+ L L ++L++++QL+E GT L++ L E+++LV MA+ LG + SRH+ +EDIQR+E+ L P PKAYY AIR+GLCNAY AASVV S LV TSK G MG AG + +S AVP+V +A A AALKAGD +QTRRV KI D+APD+ +C LA++LAL+L+DG D T+ T+ A+ + TH AG+G G GA D +EE M+WFVEE A E +N A VQAGR+LG +HL LL AVG+DCL+GTN EKV LV +IL A+ R TS+ + R R++ HD Q A+ A +V D
Sbjct: 554 GPAKDESLDSWRARLRQQEQAAEREDTKAENPAARTSSSTQGDKPGKPDRATTGPISGSSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGT-----RERLN---HDASSAQPASRQSHAAATRPAVPD 965
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 256 bits (654), Expect = 7.510e-70 Identity = 167/381 (43.83%), Postives = 224/381 (58.79%), Query Frame = 1
Query: 433 EQSRAEEHARLQP--------MFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIATSCAKTKNTHN--AAGVGWGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSR-VSAPSHDGVVQQLA--AELEALKAAMKSVEDKHHAEL 1536
E+ R+ EHA L P M R Q +S A L L REN E L++I++++E + EL+D + L LVTM+ LG+VA +H ED ++RKE+ L P K YY+A+RSGLC AY AASV+ S VSTSK G MGK G A KL+SGAVP++G + AG AL+AGD +QTRR+VKIT +APD VEC LA+ LAL+LTDGL ++ AT + N A G G G G + SEED ++ +EE + E ++ G G+RLGK+HL KLL A+ CL G+N T +K+ L+L IL AD +PA T + + VRS A +HD + A A ++A AA+KS +DK AEL
Sbjct: 143 ERVRSPEHASLSPGKAEEVDPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDM----SEEDVFKYLLEEVTAYERNDHG----------GKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAEL 509
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 261 bits (666), Expect = 3.630e-69 Identity = 167/388 (43.04%), Postives = 223/388 (57.47%), Query Frame = 1
Query: 343 GPDNNESLSAWRSRL----QAELVEKKPAEQERTEQSRAEE--------------------HARLQPMFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIAT-SCAKTKNTHNAAGVG-------WGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASE 1410
GP +ESL +WR+RL QA + E AE S + + A + + + Q++SF+ L L + +L+++ QL+E GT L L EL++LV MA+ LGD+ SRH+ +EDIQR+E+ L P PKAYY AIR+GLCNAY AASVV S LV TSK G MG AG + +S AVP+V +A A AALKAGD +QTRRV KI D+APD+ +C LA++LAL+L+DG D T+ T A+ + TH AG+G W GA D +EE M+WFVEE A E + A VQAGR+LG +HL LL AVG+DCL+GTN EKV LV +IL A+ + TS+ ++
Sbjct: 369 GPAKDESLDSWRARLRQQEQAAVREDTKAENPAVRTSSSTQGDKPGKPDGATTEPISGSSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDI----GASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQ 752
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 253 bits (647), Expect = 2.130e-67 Identity = 168/374 (44.92%), Postives = 216/374 (57.75%), Query Frame = 1
Query: 430 TEQSRAEEHARLQPMFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIATSCAKTKNTHN--AAGVGWGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSR-VSAPSHDGVVQQLA--AELEALKAAMKSVEDKHHAEL 1536
T +AEE RL FR Q+ S A LD L REN L+ I+ +E+ AG EL D + L LVTM+ LG+VA RH ED ++QRKE+ L P KAYY AIR+GLC AY AAS + S V TSK G MGK G A KL+S AVP++G + AG AL+AGD +QTRR+VKIT +APD VEC LA+ LAL+LTDGL ++ AT + N A G G G G + SEED ++ +EE A+ R G+RLGK+HL KLL A+ CL G+N T +K+ L+L IL AD +PA T + + VRS A +HD + A A ++A AA+KS +DK AEL
Sbjct: 348 TSPEKAEEVDRL---FRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDM----SEEDVFKYLLEE----------VTADERNDHGGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAEL 704
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 244 bits (622), Expect = 4.280e-64 Identity = 164/371 (44.20%), Postives = 225/371 (60.65%), Query Frame = 1
Query: 433 EQSRAEEHARLQP--------MFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIATSC-AKTKNTHNAAGVGWGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSR-VSAPSHDGVVQQLAAELEALKAAMKSVE 1515
E++R+ E A L P +F Q++S A LD L RE + L++I++++E AG V +L+D D ++L LVTM+ LG+VA RH ED +IQRKE+ L AYY+A+RSGLC AY AASV+ S VSTSK G MGKAG A KL+S AVP+VG + AG AL+AGD +QTRR+VKIT +A DAV+C LA+ LAL+LTDGL +D AT+ A AG+ G +SEED E+ +EE AS + ++ G G RLGK+HL KLL A+ + L G+N T +K+ LVL IL AD A T + + + VRS V P+HDG + AE A++AA+++++
Sbjct: 388 ERARSPERASLSPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGGADMTPGD------MSEEDVFEYLLEEVASYKRNDHG----------GVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPS-RAEFTAMQAALEALK 741
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FHA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA2_ECTSI) HSP 1 Score: 236 bits (602), Expect = 3.230e-62 Identity = 174/444 (39.19%), Postives = 243/444 (54.73%), Query Frame = 1
Query: 334 LTDGPDNNESLSAWRSRL-----------QAELVEK--------KPAEQERT-EQSRAEEHARLQP--------MFRVQVASFAELDELTRENLETLQEIKQLLEKPAAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIATSCAKTKNTHNA---AGVGWGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNR----------LVLVILAGADFRPAETSNASEGIFVRSR-VSAPSHDGVVQQLA------AELEALKAAMKSVEDK 1521
LT GP E L +WR RL + + +EK + E E+ R+ EHA L P +F+ Q++S A LD L REN L++I++++E AG V EL+D ++L LVTM+ LG+V +H ED D++R+E+TL P KAYY A+R+G+CNAY AASV+ S VSTSK G MGKAG A K++S A+P+VG AG A+K+GD +QTRR+VKIT +A DA+EC LA+ LAL+L GL +D A + A + A AG+ G +L +SE D E+ ++E ASC ++ G G+RLGK+HL KLL AV + CL G + T +K L+L IL AD R A TS+ + + V+S V +HD +A A +E LK+ K + DK
Sbjct: 247 LTGGPAYGEGLDSWRERLAPKHKTKLQIFRGDRMEKDAPVPPGSRNGRHEAVGERVRSPEHASLSPEKAEEADRVFKAQLSSSAGLDSLIRENPGALEDIQRVIEASVAGSVSVDNELSDMQSRRKLGTLVTMSTALGEVVLKHTEDMDVKREELTLPPFSKAYYTAVRTGICNAYLAASVIDSDWVSTSKTGGMGKAGAALKVMSRAIPVVGGPTGLAGKAMKSGDHYLQTRRLVKITAMAHDAIECCSLARRLALQLAGGLRND--ANAGANEVDHIRADITAGMNGGSGSGQGPNSLPAIMSEGDVFEYVLKEVASCGHNDHG----------GKRLGKKHLRKLLKAVQRGCLDGLSCTEQKARTRMSSRQQMAVLLLEILPEADIRHAATSSLLKEVIVKSLPVVGAAHDSGSPSMADFAALQAAVEELKSDNKQLRDK 678
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI) HSP 1 Score: 224 bits (571), Expect = 2.040e-56 Identity = 180/510 (35.29%), Postives = 246/510 (48.24%), Query Frame = 1
Query: 334 LTDGPDNNESLSAWRSRLQAELVEKKPAEQERTEQSRAEEHARLQPM-------------------------FRVQVASFAELDELTRENLETLQEIKQLLEKP------AAGIVPSGTELTDADKLQELDKLVTMAKTLGDVASRHIEDEDIQRKEMTLGPVPKAYYAAIRSGLCNAYFAASVVGSGLVSTSKVGVMGKAGTAFKLISGAVPMVGWIASFAGAALKAGDCLIQTRRVVKITDLAPDAVECSKLAKSLALRLTDGLTDDTIATSCAKTKNTHNAAGVGWGXXXXXXXGALADGVSEEDFMEWFVEEFASCESSNCGAAAEIREVQAGRRLGKQHLHKLLTAVGQDCLQGTNNTWEKVNRLVLVILAGADFRPAETSNASEGIFVRSRVSAPSHDGVVQQLAAELEALKAAMKSVEDKHHA------ELGXXXXXXXXXXXXXXXXXGKVATFEKRLPKSHGGLGGLVDAGGGYILAQEQK-TESQEEFNERMEYPARAAD 1749
+T GP++ + L +WR+R+Q + + + + E A+ R Q F QVASFA L LT+ + E L EIKQL+ P A G+ P+ E D +KL++L++L MA TL ++AS H+ED+ +Q +E L KAY+ A+R G+CNA+ A+SVVGS LV+TSK G +G AG A KL+S AVPMVG + A AALK GD IQTRRVVKI D+A DAVEC LA+ LA G GW AL DG + D MEWF +E A+ E + A E QAGRRLGK+HL LL AVG L+G + EKV LV +L + T A + + + PS V + +L SVE + E+ +V++ ++++ KS G+V GGG L Q T+ E F E ++ A AAD
Sbjct: 647 ITGGPEHGD-LDSWRARIQPQQQREAEHDDPKEEADVAQHSLRSQDAETVETDIVHPGPSCPAEEERDPGHSFGEQVASFAGLAALTKGDCEALDEIKQLIRAPPIRAPPADGVSPA-PEPIDEEKLRDLNRLAEMATTLSEIASSHMEDQWMQEREQGLSQARKAYFNAVRDGVCNAFLASSVVGSNLVATSKTGGIGTAGKALKLLSAAVPMVGGLGGIASAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXGGG-GWSQGEY----ALPDGARDRDVMEWFADEVANLEPQDHHATRTTPEEQAGRRLGKKHLQTLLLAVGNGRLEGAKSIEEKVELLVRTVLPEDEGNAVSTPQAPDVVVEQ----VPSSTDSVLRQTDSAASLLIGRDSVESDVSSVAALMGEIQSLRVSLDDSNAKQSKLENEVSSLKEKV-KSAPDSDGVVSIGGGQALMQRVVVTKKPETFLEESQHEAVAAD 1144 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.228.20 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.228.20 >prot_P-littoralis_Contig17.228.20 ID=prot_P-littoralis_Contig17.228.20|Name=mRNA_P-littoralis_Contig17.228.20|organism=Pylaiella littoralis U1_48|type=polypeptide|length=637bp MASTDRDALVALYNATDGANWNQKANWNTDADLSLWQGIAVNVQGRVVQLback to top mRNA from alignment at P-littoralis_Contig17:973236..981936- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.228.20 ID=mRNA_P-littoralis_Contig17.228.20|Name=mRNA_P-littoralis_Contig17.228.20|organism=Pylaiella littoralis U1_48|type=mRNA|length=8701bp|location=Sequence derived from alignment at P-littoralis_Contig17:973236..981936- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:973236..981936- >mRNA_P-littoralis_Contig17.228.20 ID=mRNA_P-littoralis_Contig17.228.20|Name=mRNA_P-littoralis_Contig17.228.20|organism=Pylaiella littoralis U1_48|type=CDS|length=1911bp|location=Sequence derived from alignment at P-littoralis_Contig17:973236..981936- (Pylaiella littoralis U1_48)back to top |