mRNA_P-littoralis_Contig17.197.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: D8LE38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE38_ECTSI) HSP 1 Score: 335 bits (858), Expect = 1.210e-108 Identity = 160/184 (86.96%), Postives = 176/184 (95.65%), Query Frame = 2
Query: 638 LRPGRKGLGVRDEVAAAPSAFPDQYLRGEVPCSKHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
+RP RKGL VRDEVAA PSAFPD+YLRGEVPCSKHCSAASALVWVCPLEQLDY++YLPMFFDGIRCLEEPC TLARQGVSDLLSAARG P+RILPSLPNIMRA+R+AISCKNPGVIIFACSALRQLATGNKEVGEALV YYKMFL++FN+FMN T+STGD+IDYGQRN+QD+G+A+S TVETLE
Sbjct: 1 MRPARKGLSVRDEVAAVPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGYPQRILPSLPNIMRALRVAISCKNPGVIIFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDVGEAVSCTVETLE 184
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A6S9H4I7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H4I7_HETAK) HSP 1 Score: 206 bits (523), Expect = 2.990e-57 Identity = 127/349 (36.39%), Postives = 191/349 (54.73%), Query Frame = 2
Query: 155 IGQSSRGTAGVYELQLRRKLLQQQLGVVDDRCQRVAKVVAKKHLARLSRPEQPGQRPVPGRDVAHRRQKIITNPGGLPSICVAGVGGGEKIRKQQNIGLTGGRPAATDKAANQERDASQHKQNLLAAAPFKRGGCIDHTRKKQMLQDKQREIEQQAALEKKLR---PGRKGLGVRDEVAAAPSAFPDQYLRGEVPCS-KHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
+ S RG AG+ EL++++KLL+QQ+ V+D R ++ V+ KK ++ QR + G D + + K P G +R+ GG + D + A FK G D RK+ +L + +E+++ +++ R P + G R EV + FP +Y RGE+PCS +H +A AL WVCPL+ LDYDHYLP+FFDGIR E+P LARQGV +LL AARG PER+LP LP ++ +R A+ ++P V++ A + +L N VGEALVPYY+ L++ N+F+ + GD +DYGQR +D+ + + +E LE
Sbjct: 1 MASSGRGGAGIMELRMKKKLLEQQIAVLDSRAGKITNVLEKKRAQKMR-----DQRAL-GSDNSSNQSK--------PPPSQLSRAGSSSMRQ------LGGSSSLPDLG--------------IQARTFKSGSTADRVRKQHLLNQYKTNMERESRKKEEARRRVPPKAGAFRRKEVPK--TLFPVRYNRGELPCSVEHTAAGYALTWVCPLQTLDYDHYLPIFFDGIRATEQPYKFLARQGVRELLEAARGYPERVLPCLPEVVAGLRRALDTRDPPVLLAALGCVEELVGCNAGVGEALVPYYRQLLSVMNLFLAKRENLGDAMDYGQRRGEDLAARVGEVLEALE 313
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A7S2Y192_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y192_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.180e-52 Identity = 135/384 (35.16%), Postives = 206/384 (53.65%), Query Frame = 2
Query: 125 PATRAPEVACIGQSSRGTAGVYELQLRRKLLQQQLGVVDDRCQRVAKVVAKKHLARLSRPEQPGQRPVPGRDVAHRRQKIITNPGGLPSICVA-GVGG---GEKIRKQQNIGLTGGRPAAT------DKAANQERDASQHKQ---------------NLLAAAPFKRGGCIDHTRKKQMLQDKQREIEQQAALEKKLRPGR---KGLGVRDEVAAAPSAFPDQYLRGEVPCS-KHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
P++ AP + ++ RG G+ EL+L++KL++QQL V++ +V+ V+ KK +L +R V G + + + + + GVGG G R G GG + +Q RD QH + + +A K G D RKK +L+ + ++++ E++ RPG K R FP +Y RGE+PCS +H S+ AL+W+CPL+ LDY+HYLPMFF+GIRC E+P +A QGV +LL A++G PERILP+LP +++ +R+A+ K P +II A ++ L N +GEA+VPYY+ L++FN+F R+ GD +DYGQR DI I +T+E LE
Sbjct: 3 PSSSAPNIPTT-RTGRGN-GIMELRLQKKLMEQQLAVLNMNEAKVSNVLEKKRAKKLRE-----KRGVAGGGNSWGNADGLAGQRSVSATQLELGVGGNSFGGTGRXXXXXGPMGGMRDVSPIDGRHQMGGSQTRD--QHNEVHGHHPXXXXXQVDHHRIAPRTIKPGSDADRVRKKFLLRQAGQTLKRE---ERERRPGPRPPKAGAYRRANEQGEILFPIRYKRGELPCSIEHKSSGYALLWICPLQTLDYEHYLPMFFEGIRCTEDPYKYMASQGVMELLDASKGYPERILPTLPEVVKYLRMALMSKLPDIIITALRCIQSLVLCNVGIGEAMVPYYRQLLSVFNLFRGKRRNLGDGMDYGQRKGDDINSVIDETLEVLE 374
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A7S2FEA0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEA0_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.030e-46 Identity = 87/217 (40.09%), Postives = 133/217 (61.29%), Query Frame = 2
Query: 542 FKRGGCIDHTRKKQMLQDKQREIEQQAALEKKLRPGRKGLGVRDEVAAAPSAFPDQYLRGEVPCS-KHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
F + RK+ +L+ + ++ Q + L P + G + + FP +Y RGE+PC+ +H S+A+ L WVCPL LDY+HYLP+F DGIRC E P LARQG +LL A+G P+R++P +P +++ +RLA++ +P +I+ A + L++L N VGEALVPYY+ L++ N+F+ + GD IDY Q D+ AI +T+E LE
Sbjct: 22 FPESSRVSIIRKRNILRQAEMDLSSQREV---LPPPKPKAGAYRKKDVPTTLFPIRYKRGELPCAIEHRSSANGLSWVCPLHNLDYEHYLPIFVDGIRCTENPYCFLARQGCHELLEGAQGYPDRVIPCIPELIKPLRLALTTNHPDIILAALTFLKELVLCNYGVGEALVPYYRQLLSVLNLFLTKRTNIGDAIDYSQFKGNDMSTAIMETLEVLE 235
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: F0Y431_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y431_AURAN) HSP 1 Score: 171 bits (433), Expect = 1.150e-45 Identity = 80/177 (45.20%), Postives = 119/177 (67.23%), Query Frame = 2
Query: 662 GVRDEVAAAPSAFPDQYLRGEVPCS-KHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
GV + + FP +Y RGE+PCS +H + + L W+CPL QLDY+HYLP+F DGIRC E P +ARQG +L+ A+G P+ +LP LP++++ IRLA++ K+P ++ A AL+++ N VGEALVP+Y+ L++ N+F ++ GD I YGQR D+G A+ +T+E LE
Sbjct: 30 GVFRKTKVEATMFPIRYRRGELPCSIEHRGSGNNLSWICPLLQLDYEHYLPIFLDGIRCTESPYQFVARQGFDELIEEAKGFPDCVLPCLPDLIKPIRLALNTKDPDIVHAALRALQKIVLSNYGVGEALVPFYRQLLSVMNLFFTKRQNLGDAIFYGQRKGTDLGTAVLETLELLE 206
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A835YJW5_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW5_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.460e-44 Identity = 125/353 (35.41%), Postives = 178/353 (50.42%), Query Frame = 2
Query: 179 AGVYELQLRRKLLQQQLGVVDDRCQRVAKVVAKKHLARLSRPEQPGQRPVPGRDVAHRRQKIITNPGGLPSICVAGVGGGEKIRKQQNI--GLTGGRPAATDKAANQERDASQHKQNLLAAA------PFKRGGCIDHTRKKQMLQDKQREIE-----QQAALEKKLRPGRKGLGVRDEVAAAPSAFPDQYLRGEVPCSKHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNST---RSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
AG+ ELQLR+KLLQQQL +V ++C R+ V+ KK G+ G D R +++P P+ R+ +N GL AS H + AAA F G ID++RK+++++ + E E ++AA K A PS FP +Y G++PCS S LVWVCPL+QLDY +YLP+F DGIRC +PC LARQG+ DLLSAA G+PER++P L +I A+R A + ++ + C L L EVG ALVP+YK FL+L N +N + G I + ++ D+ I +T++ LE
Sbjct: 11 AGICELQLRKKLLQQQLELVSNKCNRMTAVLEKK-----------GEAQARGHD---RGADPLSHPKNTPA------------RRPRNTFYGL---------------EHASTHDAHHTAAARIGGAQTFPPGSVIDNSRKRELIRKARHEWEHDKAAREAAAAAKAPVQXXXXXXXXXXXATPSRFPGRYAMGDIPCSID-SGDGVLVWVCPLQQLDYHYYLPLFLDGIRCTADPCKMLARQGLLDLLSAATGTPERVVPLLKDIAMALRNACLTDSQELVAYTCKVLETLVGIGPEVGLALVPHYKAFLSLLNKHINDAPLKNAQGKEIGHNRK--LDLSVLIEETLQMLE 319
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A7S1TRG1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRG1_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.460e-40 Identity = 121/350 (34.57%), Postives = 187/350 (53.43%), Query Frame = 2
Query: 176 TAGVYELQLRRKLLQQQLGVVDDRCQRVAKVVAKKHLARLSRPEQPGQRPVPGR----DVAHRRQKIITNPGGLPSICVAGVGGGEKIRKQQNIGLTGGRPAATDKAANQERDASQHKQNLLAAAPFKRGGCIDHTRKKQMLQDKQREIEQQAALEKKLRPGRKG-LGVRDEVAAAPSAFPDQYLRGEVPCS-KHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISD----TVETLEPL 1195
+AG+Y+L+L+++LL+QQL V+D R R+ ++ K+ R S P+ G R P R D+ RR +++ +++Q G T A D + + +S +A AP GG +D RK+ ++ + ++ +A ++ R RK R ++ F +Y RGE+P + +H + L WVCPL+ LDY++YLP+FF+GIRC +P LARQGV +LL A+RG PER+LP L +I+ +R A+ + V+I L++L T N VGEA+VPYY+ FL F + + GD +DY QR K I+D T ETL+ L
Sbjct: 2 SAGLYDLKLKKRLLKQQLEVLDVREARINEIKMKRTQQRSS-PQ--GGRGSPARLKPLDLEARRSRLL--------------------QRRQEAGQTA---ALRDFNRMKPQASSSLAVYTMAPAPILPGGNMDRIRKRDAVRRTKLRLQGEAV--RRERANRKPPKPKRVDMKLTEPLFVGRYTRGELPATLEHRTNGYGLSWVCPLQSLDYEYYLPIFFEGIRCQRDPYRFLARQGVLELLDASRGYPERVLPYLESIVVPLRDAVVTHDEDVLIAVLMILQKLVTCNPGVGEAIVPYYRQFLAAFKRHYSHGENLGDGMDYKQR------KGITDICTMTAETLQLL 317
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A482SS01_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS01_9ARCH) HSP 1 Score: 157 bits (396), Expect = 2.810e-39 Identity = 79/200 (39.50%), Postives = 125/200 (62.50%), Query Frame = 2
Query: 593 DKQREIEQQAALEKKLRPGRKGLGVRDEVAAAPSAFPDQYLRGEVPCS-KHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
D+ R + + A E++++ + R E+ PS P++Y RGE+PC+ +H ++ L W CPLE LDY++YLP+FFDG++C + + +ARQG+ D+L A+RG PERI+P L + R +R A++ + +++ +L QL N EVG L+ Y + FL FM+ + TGD+IDYGQR N D+G+ I +E +E
Sbjct: 105 DEIRNMIKHKAEEERIKEEKNKPRTRPEIKIPPSMLPNRYKRGELPCTIEHGTSGLYLSWACPLENLDYEYYLPLFFDGLQCKDHITSFIARQGIEDMLYASRGHPERIIPVLHLLARPLRNALAKFDEEILLPVLKSLEQLILSNAEVGAELLKYGRQFLVPIAYFMDKNKHTGDKIDYGQRRNDDVGEQIRRVLELME 304
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A7S4ED43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED43_9STRA) HSP 1 Score: 157 bits (397), Expect = 5.300e-39 Identity = 104/346 (30.06%), Postives = 175/346 (50.58%), Query Frame = 2
Query: 158 GQSSRGTAGVYELQLRRKLLQQQLGVVDDRCQRVAKVVAKKHL-ARLSRPEQPGQRPVPGRDVAHRRQKIITNPGGLPSICVAGVGGGEKIRKQQNIGLTGGRPAATDKAANQERDASQHKQNLLAAAPFKRGGCIDHTRKKQMLQDKQREIEQQAALEKKLRPGRKGLGVRDEVAAAPSAFPDQYLRGEVPCS-KHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
G+ S GV +L++++ +L +Q+ ++DDRC K++ KK R S+ +P ++ + Q++I P LP +R+ T + D HK A T Q +Q++ R + + GV + + FP +Y RGE+PC+ +H + + L W CPL QLDY+HYLP+F DGIRC + +ARQG +++ A+G P+ +LP +P +++ IRLA++ +P +++ +AL+++ N VGEA+VP+Y+ L N+F ++ GD+I YGQR D+G A+ +T+E LE
Sbjct: 46 GRMSPQKVGV-DLKMQKAMLLKQMALLDDRCAATHKILGKKTRDRRASKLLAQAHAHLPRSSLSKQGQRVIEKPVALPKR--------PPVRR-------------TTPSITPNPDVLIHKLKRTAK-----------TVNAQKIQNRTRPHKGPCS------------GVFRKQKVEETVFPTRYERGELPCAIEHGACHNTLSWACPLLQLDYEHYLPIFLDGIRCTDARYKFVARQGFDEMIEEAKGFPDCVLPVVPALIKPIRLALATHDPDIVVAGLNALQKVVLSNYGVGEAMVPFYRQLLQPMNLFYTKRQNIGDQIFYGQRKGTDLGTAVLETLELLE 346
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Match: A0A0M9GB55_9TRYP (Putative mitochondrial PACRGB n=2 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9GB55_9TRYP) HSP 1 Score: 147 bits (371), Expect = 6.500e-36 Identity = 75/182 (41.21%), Postives = 112/182 (61.54%), Query Frame = 2
Query: 644 PGRKGLGVRDEVAAAPSAFPDQYLRGEVPCSKHCSAASALVWVCPLEQLDYDHYLPMFFDGIRCLEEPCTTLARQGVSDLLSAARGSPERILPSLPNIMRAIRLAISCKNPGVIIFACSALRQLATGNKEVGEALVPYYKMFLNLFNIFMNSTRSTGDRIDYGQRNNQDIGKAISDTVETLE 1189
PG G + + P+ F Y RG++P S +A L+W + +LDY HYLP+FFDG+R LEEP + +A QG DLL +ILP++P I+ ++ A++ ++P V+ +++L VGEALVPYY+ L +FN+F N T++ GDR+DYGQRN+QD+ I+DT+ LE
Sbjct: 120 PGVAGAYAKQRIP--PTEFRHHYERGDLPLSVQHAAKRTLMWKVDVSKLDYHHYLPIFFDGLRELEEPFSFVAHQGSLDLLE---NGGAKILPTVPQIIMPLKTALNTRHPDVLRKVFHVIQKLVVSGDHVGEALVPYYRQLLPVFNLFKNRTKNMGDRMDYGQRNSQDLSSLINDTLYLLE 296 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.197.1 >prot_P-littoralis_Contig17.197.1 ID=prot_P-littoralis_Contig17.197.1|Name=mRNA_P-littoralis_Contig17.197.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=439bp MPATRAPEVACIGQSSRGTAGVYELQLRRKLLQQQLGVVDDRCQRVAKVVback to top mRNA from alignment at P-littoralis_Contig17:818852..823537- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.197.1 ID=mRNA_P-littoralis_Contig17.197.1|Name=mRNA_P-littoralis_Contig17.197.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4686bp|location=Sequence derived from alignment at P-littoralis_Contig17:818852..823537- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:818852..823537- >mRNA_P-littoralis_Contig17.197.1 ID=mRNA_P-littoralis_Contig17.197.1|Name=mRNA_P-littoralis_Contig17.197.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1317bp|location=Sequence derived from alignment at P-littoralis_Contig17:818852..823537- (Pylaiella littoralis U1_48)back to top |