mRNA_P-littoralis_Contig17.146.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: D7FK47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK47_ECTSI) HSP 1 Score: 213 bits (541), Expect = 8.650e-68 Identity = 99/135 (73.33%), Postives = 113/135 (83.70%), Query Frame = 3
Query: 6 KGYQRTGFMFENTGSKQIFERFLGKMATFAEEQPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAAVEERFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASHE 410
+GY RTG+MFE TGSK IF+ FLG+M AEE+P VLE+GSWEG SA W+AEHLL+H SLLVCLDTWDGG E+ENT + M +VEERFHWNM +APNGERV+A KGDSLESLAGL+A GL SSFD VYVDASHE
Sbjct: 29 RGYNRTGYMFEATGSKNIFQTFLGEMMEAAEERPFFVLESGSWEGGSASWVAEHLLKHSESLLVCLDTWDGGQEMENTGFDMVSVEERFHWNMGKAPNGERVVAFKGDSLESLAGLVASGLTSSFDVVYVDASHE 163
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: D7FK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK29_ECTSI) HSP 1 Score: 172 bits (437), Expect = 3.120e-51 Identity = 83/131 (63.36%), Postives = 100/131 (76.34%), Query Frame = 3
Query: 18 RTGFMFENTGSKQIFERFLGKMATFAEEQPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAAVEERFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASHE 410
RTG + N K +F+RF G MA AEEQP VLETGSW+G SA WIAEH+L+HP S+LVCLDTW+G P EN+ Y MAA+E+RF NMA+ PNG+RV+A KG SLESLA +LA GL S FDAV++D SHE
Sbjct: 58 RTGLVL-NPSLKSVFQRFFGGMAGLAEEQPFHVLETGSWQGESASWIAEHILKHPESILVCLDTWNGSPPPENSGYEMAAIEDRFRSNMARVPNGDRVVAFKGTSLESLANILASGLDSRFDAVFLDGSHE 187
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: A0A6H5JQS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS8_9PHAE) HSP 1 Score: 153 bits (387), Expect = 1.360e-44 Identity = 73/110 (66.36%), Postives = 86/110 (78.18%), Query Frame = 3
Query: 81 MATFAEEQPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAAVEERFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASHE 410
MA AEEQP VLETGSW+G SA WIAEH+L+HP S+LVCLD W+G P EN+ Y MAA+E+RF NMA+ PNG+RV+A KG SLESLA +LA GL S FDAV +D SHE
Sbjct: 1 MAGLAEEQPFHVLETGSWQGESASWIAEHVLKHPESILVCLDKWNGSPPPENSGYDMAAIEDRFRSNMARIPNGDRVVAFKGSSLESLANILASGLDSRFDAVLLDGSHE 110
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: A0A7S4KFR5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4KFR5_9EUKA) HSP 1 Score: 83.6 bits (205), Expect = 2.400e-17 Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 3
Query: 105 PVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAAVEE------RFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLIS-------SFDAVYVDASH 407
PV +LE G++EG++ +W+AEHLLRH S L+C+D W L P+A E RF N+A+ PNG RV +G +L +L G++A +FD +YVDA H
Sbjct: 9 PVRILELGAFEGSTTMWLAEHLLRHKDSWLLCVDLWSTA-SLAAVGQPIAGTPELANTLGRFSANVARTPNGGRVRTFRGSTLAALGGMIAAAADGDQAAEGDAFDLIYVDAGH 121
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: A0A3L7QJ61_9BACT (Class I SAM-dependent methyltransferase n=2 Tax=Bacteria TaxID=2 RepID=A0A3L7QJ61_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 2.570e-16 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 3
Query: 102 QPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAAVEERFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASHE 410
+PV LE GS EG SA+WIA+HLL HPS+ L+C+D W P A E RF N+A+ +V +K DS GLL++G FD +Y+D SHE
Sbjct: 25 RPVRCLEIGSHEGRSAVWIAQHLLSHPSATLICIDPW-----------PDAEAEHRFDANIAETGRAPQVRKLKTDSWR---GLLSQG--PGFDLIYIDGSHE 111
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: A0A6L7F2M8_9ACTN (Class I SAM-dependent methyltransferase n=2 Tax=Nocardioides flavescens TaxID=2691959 RepID=A0A6L7F2M8_9ACTN) HSP 1 Score: 70.9 bits (172), Expect = 2.150e-12 Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 3
Query: 99 EQPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAA----VEERFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASHE 410
++P+ VLE GSWEG SAL+ + P++ L C+DT+ GG E + D P A VE+RF N A+ + RV+A D+ +LA L A G + FD V VD SHE
Sbjct: 38 DEPLDVLEIGSWEGRSALFFLHYF---PAARLTCVDTFTGGAEHVDGDSPWAGELPHVEQRFRTNTAEFADRVRVLAEPSDA--ALARLAAEG--AHFDLVLVDGSHE 138
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: UPI00155923CB (class I SAM-dependent methyltransferase n=1 Tax=Herbaspirillum rubrisubalbicans TaxID=80842 RepID=UPI00155923CB) HSP 1 Score: 69.3 bits (168), Expect = 9.480e-12 Identity = 40/107 (37.38%), Postives = 57/107 (53.27%), Query Frame = 3
Query: 102 QPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAAVEERFHWNM----AQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASHE 410
QP VLE GS+EG S +++ E +VC+DTW+G E + M VE+RF N+ A A + + +KG S ES L+ G +FD +YVD SH+
Sbjct: 33 QPQKVLEIGSYEGRSTVFMMELFSERNPLEIVCIDTWEGATEHQEDGIDMLEVEKRFDQNVQAAIANAVHPINLRKVKGRSFESCCKLICDGEEGTFDWIYVDGSHK 139
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: UPI001B826D53 (class I SAM-dependent methyltransferase n=1 Tax=Phenylobacterium sp. 20VBR1 TaxID=2803784 RepID=UPI001B826D53) HSP 1 Score: 68.2 bits (165), Expect = 2.860e-11 Identity = 44/127 (34.65%), Postives = 66/127 (51.97%), Query Frame = 3
Query: 69 FLGKMATFAE----EQPVAVLETGSWEGASALWIAEH--LLRHPSSLLVCLDTWDGGPELEN---TDYPMAAVEERFHWNM----AQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASHE 410
F G + T+ + +P +LE GS+EG S +W+ EH + + C+DTWDGG E + + M VE RF+ N+ + P+ + +K S +LA L+A G FD VYVD SH+
Sbjct: 20 FSGNVPTWRQIIDKNKPRRILEIGSFEGRSTVWMIEHCTVAAQGDVEITCIDTWDGGIEHQKGGQIETSMPDVERRFNANIEIAQGKTPHKAEITRMKMYSNLALAKLIAEGKTEYFDLVYVDGSHQ 146
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: A0A8G1ASA8_9MYCO (Class I SAM-dependent methyltransferase n=1 Tax=Mycobacterium holsaticum TaxID=152142 RepID=A0A8G1ASA8_9MYCO) HSP 1 Score: 66.6 bits (161), Expect = 2.300e-10 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 3
Query: 87 TFAEEQPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPE-LENTDYPMAAVEERFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASH 407
TF + PV VLE GSWEG S L++ + L +DTW GG E +N ++ +E+RF N+A P R+ KG SL+ L LL + FD +YVD SH
Sbjct: 95 TFDRKDPVHVLEIGSWEGRSTLFLLTYFTH---GHLTAVDTWAGGDEHQDNAARDLSDLEDRFDANLA--PCASRLTKRKGSSLQVLPQLLDEEQV--FDVIYVDGSH 195
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Match: A0A7I7NW67_9MYCO (Uncharacterized protein n=2 Tax=Mycobacterium seoulense TaxID=386911 RepID=A0A7I7NW67_9MYCO) HSP 1 Score: 65.5 bits (158), Expect = 4.080e-10 Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 3
Query: 90 FAEEQPVAVLETGSWEGASALWIAEHLLRHPSSLLVCLDTWDGGPELENTDYPMAAVEERFHWNMAQAPNGERVIAIKGDSLESLAGLLARGLISSFDAVYVDASH 407
FA P+ VLE GSWEG S L++A + P + L +DTW+G E + + +E RF N++ RV KG S L LLA G +D +YVD SH
Sbjct: 75 FARTDPLDVLEVGSWEGRSTLFLATYF---PHARLTAVDTWEGSHESISATTDVQGLEARFDHNLSAC--AARVTKRKGMSSTVLPQLLAEG--RRYDLIYVDGSH 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.146.1 >prot_P-littoralis_Contig17.146.1 ID=prot_P-littoralis_Contig17.146.1|Name=mRNA_P-littoralis_Contig17.146.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=127bp MFENTGSKQIFERFLGKMATFAEEQPVAVLETGSWEGASALWIAEHLLRHback to top mRNA from alignment at P-littoralis_Contig17:648528..649722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.146.1 ID=mRNA_P-littoralis_Contig17.146.1|Name=mRNA_P-littoralis_Contig17.146.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1195bp|location=Sequence derived from alignment at P-littoralis_Contig17:648528..649722+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:648528..649722+ >mRNA_P-littoralis_Contig17.146.1 ID=mRNA_P-littoralis_Contig17.146.1|Name=mRNA_P-littoralis_Contig17.146.1|organism=Pylaiella littoralis U1_48|type=CDS|length=381bp|location=Sequence derived from alignment at P-littoralis_Contig17:648528..649722+ (Pylaiella littoralis U1_48)back to top |