mRNA_P-littoralis_Contig17.142.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: A0A6H5L3P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P9_9PHAE) HSP 1 Score: 339 bits (870), Expect = 8.770e-111 Identity = 192/341 (56.30%), Postives = 231/341 (67.74%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLESPDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGSVVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGNEMMTRVIFVPRTTE---YFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEKTCCIASDVAR 1014
LD LIF DTTC+ VS L LGRVAPIQAAF GTPIT+G P IDYF+SAD +E PDRT M+ +DD Y+EQ VVL GGQG+WYPAP LP ELAPPP + + T A + S A +DT G S + +++L T RA RE+ R+ LRAELK+R G+ + SVVYMCAQS+FKLHP FD A KGVLEAS SNH+VFT GR+ +WT+ F RL ST+G+++MTRV FVPRT + SLLASA+V LHPFPFGGSKTSADALA+GVPTV+MAGK+ GRMAQSFYKTMG++ CC+A+DVAR
Sbjct: 61 LDVLIFADTTCEPVSHFLALGRVAPIQAAFWGTPITTGSPNIDYFLSADAMEHPDRTTMLPDDDPYSEQ-VVLFGGQGIWYPAPVLPSELAPPPRPQTTSYTASTTGVLQTPQVPILAPETASWSAAHDTITAKGGGSAGEMGSSWGGP------------ASERALETYHAAST-RASRERARSALRAELKNRFGIGQNSVVYMCAQSLFKLHPDFDLAVKGVLEASGSNHLVFTAGRRQQWTSIFHARLNSTLGDDLMTRVFFVPRTVSGAAFSSLLASADVMLHPFPFGGSKTSADALAVGVPTVSMAGKYVAGRMAQSFYKTMGMQHVCCVATDVAR 387
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: D7FK41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK41_ECTSI) HSP 1 Score: 324 bits (831), Expect = 8.390e-105 Identity = 188/339 (55.46%), Postives = 225/339 (66.37%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLESPDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDT--------AEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGSVVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGNEMMTRVIFVPRTTE---YFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEK 984
LD LIF DTTC+ VS L LGRVAPIQAAF GTPIT+G P IDYF+SADV+E PDRT M+ +DD Y+EQ VVL GGQG+WYP P LP ELAPPP + + T DT A E+E + G S ++L T RA RE+ R+VLRAELK+RIG+D+ SVVYMCAQS+FKLHP FD A KGVLEAS SNH+VFT GR+ +WT+ F+ RL ST+G+++MTRV FVPRT + SLLASA+V LHPFPFGGSKTSADALA+GVPTV+MAGK+ GRMAQSFYKTMG+++
Sbjct: 56 LDVLIFADTTCEPVSHFLALGRVAPIQAAFWGTPITTGSPNIDYFLSADVMEHPDRTTMLPDDDPYSEQ-VVLFGGQGIWYPTPVLPSELAPPPRPQTSSGAASTTAXXXXXXXXXXXXXXXXXXXXRDTITAKGGVSAAEMESSWGGPASD--------------------RALETYHAAPT-RASRERARSVLRAELKNRIGIDQNSVVYMCAQSLFKLHPDFDLAVKGVLEASGSNHLVFTAGRRQQWTSIFQARLTSTLGDDVMTRVFFVPRTVSGAAFSSLLASADVVLHPFPFGGSKTSADALAVGVPTVSMAGKYVAGRMAQSFYKTMGMQQ 372
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: A0A6S8RMR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8RMR4_9STRA) HSP 1 Score: 183 bits (465), Expect = 4.040e-47 Identity = 138/413 (33.41%), Postives = 183/413 (44.31%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLESPDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGS-VVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGNEMMTRVIFVPRT---TEYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGL-EKTCCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWERRDEARMTLKSFFARFGGLSPPTPEEV 1224
LD L+F D + +S+ L R AP+Q F G P+T+G +IDYF+SAD +E P RT+ D ++EQ VVLL GQG+WY P++P L P + AA AA+ +G+ +G + +C QS+FKLHP FDT + +LEA+ + +VFT GR+ WT RL T+G +R FVPR +Y+ LLA A+V LHPFPFGGS+TSAD LALGVP V RMA SFY +MGL +K + + YVS AARL DVE R + + RQ +WE R + F AR G P P +V
Sbjct: 584 LDVLVFADMLSEPMSYFLGFSRFAPVQVCFWGNPLTTGRSSIDYFVSADRMEHPYRTLA---GDEWSEQ-VVLLDGQGIWYRRPSIPEGLPYP------------------NREAAVAARQA------------------------------------------------------------------------LGLPQGDWPLLLCPQSVFKLHPHFDTVVRRILEATTNARVVFTAGRRQAWTKVLVSRLEKTLG-PYKSRCAFVPRQMPGADYYKLLAVADVLLHPFPFGGSRTSADGLALGVPVVVRPTTQLRCRMAYSFYASMGLTQKNWTLVASTTND-----------YVSFAARLANDVEHRRTVAAAVAARQHVIWEDRSVV-LGWARFLARVSGQRPVAPADV 889
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: A0A7S3ZLD0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLD0_9STRA) HSP 1 Score: 183 bits (465), Expect = 4.610e-47 Identity = 138/413 (33.41%), Postives = 183/413 (44.31%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLESPDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGS-VVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGNEMMTRVIFVPRT---TEYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGL-EKTCCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWERRDEARMTLKSFFARFGGLSPPTPEEV 1224
LD L+F D + +S+ L R AP+Q F G P+T+G +IDYF+SAD +E P RT+ D ++EQ VVLL GQG+WY P++P L P + AA AA+ +G+ +G + +C QS+FKLHP FDT + +LEA+ + +VFT GR+ WT RL T+G +R FVPR +Y+ LLA A+V LHPFPFGGS+TSAD LALGVP V RMA SFY +MGL +K + + YVS AARL DVE R + + RQ +WE R + F AR G P P +V
Sbjct: 584 LDVLVFADMLSEPMSYFLGFSRFAPVQVCFWGNPLTTGRSSIDYFVSADRMEHPYRTLA---GDEWSEQ-VVLLDGQGIWYRRPSIPEGLPYP------------------NREAAVAARQA------------------------------------------------------------------------LGLPQGDWPLLLCPQSVFKLHPHFDTVVRRILEATTNARVVFTAGRRQAWTKVLVSRLEKTLG-PYKSRCAFVPRQMPGADYYKLLAVADVLLHPFPFGGSRTSADGLALGVPVVVRPTTQLRCRMAYSFYASMGLTQKNWTLVASTTND-----------YVSFAARLANDVEHRRTVAAAVAARQHVIWEDRSVV-LGWARFLARVSGQRPVAPADV 889
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: A0A7S3K5W7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5W7_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.340e-45 Identity = 137/415 (33.01%), Postives = 196/415 (47.23%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSG-DPAIDYFMSADVLESPDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGS-VVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGNEMM-TRVIFVPRT---TEYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEKT-CCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWERRDEARMTLKSFFARFGGLSPPTPEEV 1224
LD LI+ D + +++ L R+APIQ F G P+TSG IDY++SAD++E+P+RT + + Y+EQ +VLL GQG+WY P E+ + N A PG + GR + R LR EL G+ G+ + +C QS+FKLHP FDT + +LEA+ ++FT+GR+ +WTA RLR+ +G+++ R++F+PR + + L+A A+V LHPFPFGGS+TS+D LA+GVP V GRMA SFY TM + C+ ++ + Q YV ARL D E R R+ I +R +WE + AR G PTPEEV
Sbjct: 528 LDVLIYADMLSEPMTYFLGFARLAPIQMLFWGNPVTSGRGMEIDYYISADIMEAPERTKLPPSLEPYSEQ-LVLLQGQGIWYRRP------------------------EYMNDNFTLLA-------------------PG---------------------------------EPGRFEQAAR---LRTEL---FGLPYGNYTLLLCPQSLFKLHPEFDTLIRKILEATSEAKVLFTQGRRERWTAVLEARLRNALGDQLYHERLLFLPRQPPGSAFMRLVALADVMLHPFPFGGSRTSSDGLAVGVPVVTRPTTNLRGRMAASFYLTMEMTNPEWCLVAENSEQ-----------YVQFVARLANDHEHRARVAAAIRERSPRIWEHHQYVYEWAR-LLARVAGRPAPTPEEV 847
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: A0A024UQX4_9STRA (Protein O-GlcNAc transferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQX4_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.950e-43 Identity = 127/390 (32.56%), Postives = 172/390 (44.10%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLES-PDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGSVVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGN--EMMTRVIFVPR---TTEYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEKTCCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWERRD 1152
LD L+F D + +++ GR+A +QAAF G P TSG P +DYF+SADV+ES PD + D++ +QVVLL G G+WY PA+P +L G R N + + VYMC QS++K P FD+ +L H+V E R WT F+ RLRS + N ++ +RV F+PR + + LL+ A+V LHPFPFGGSKTSADAL LG+P VAM F RMA SFYK MGL + +A+ V YV++A +LG D RN + I Q+Q +WE R+
Sbjct: 513 LDVLVFADLMSEPMTYFSAFGRLAHVQAAFWGNPTTSGIPTVDYFISADVMESSPDPAV-----DAHYSEQVVLLSGLGIWYDKPAVPAQL-----------------GHRRDYN----------------------------------------------------------------------------------LSEAWTVYMCPQSVYKFVPEFDSVLAEILATDPHGHLVLLEARYALWTQQFQTRLRSAMYNATDLWSRVHFLPRVGGSAPFLKLLSVADVVLHPFPFGGSKTSADALLLGLPLVAMKTPFLRCRMAYSFYKHMGLLEL--VATTVEE------------YVAIALKLGTDAAHRNEMARRIQQKQHLIWENRE 784
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: A0A485KTM2_9STRA (Aste57867_11675 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTM2_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.890e-42 Identity = 126/388 (32.47%), Postives = 170/388 (43.81%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLES-PDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGSVVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGNEMMTRVIFVPR---TTEYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEKTCCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWERRD 1152
LD L+F D + +++ R+A +QAAF G P TSG P+IDYF+SAD +ES PD I + + +QVVLL G G+WY P +P PH L +R+ G+ ++ +YMCAQS++KL P FD + VL + H+VF E R WT F+ RL + + E+ RV F PR + Y LL+ A+V LHPFPFGGSKTSADAL LG+P VAM F RMA SFYK M + + C+A+ A YV +A RLG D F + + I Q ++WE R+
Sbjct: 532 LDVLVFADIMSEPINYYAAFARLAHVQAAFWGNPTTSGIPSIDYFISADAMESSPDPMI-----EVHYSEQVVLLSGTGIWYDKPEVP----------PPHELN-------------------------------QRSAYGLNATW--------------------------------------------------------TIYMCAQSVYKLLPAFDAIVRDVLARDSAGHVVFLEARHASWTEQFQRRLFAALPPEVHHRVHFTPRAGGSLAYLKLLSVADVVLHPFPFGGSKTSADALLLGLPMVAMKTPFLRSRMAYSFYKHMQVLE--CVATTDAE------------YVDIAVRLGTDRSFHDEMARRIRASQESIWENRE 803
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: W4H2F0_9STRA (Glyco_transf_41 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H2F0_9STRA) HSP 1 Score: 161 bits (408), Expect = 8.530e-40 Identity = 124/386 (32.12%), Postives = 166/386 (43.01%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLES-PDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGSVVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGN-EMMTRVIFVPR---TTEYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEKTCCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWE 1143
LD L+F D + +++ GR+A +QAAF G P TSG P +DYF+SAD +ES PD + +S+ +QVVLL G G+WY P +P +L HR D E E T +YMC QS++KL P+FD +L H+V E R P+WT R RL+ T+ + EM RV F PR + + LL+ A+V LHPFPFGGSKTSADAL LG+P VAM RMA SFY + ++ C+AS Y+++A RLG D +R+ I +RQ LWE
Sbjct: 514 LDVLVFADLMSEPMTYFAAFGRLAHVQAAFWGNPTTSGIPNVDYFISADAMESSPDPAV-----ESHYSEQVVLLSGVGIWYDKPTVPAQLG------------------HR----------------RDHHLEDEWT-----------------------------------------------------------------IYMCPQSVYKLVPQFDRVLFEILRQDPQGHVVLLEARYPQWTRQLRTRLQQTINSTEMWNRVHFRPRVGGSDAFLKLLSVADVVLHPFPFGGSKTSADALLLGLPLVAMKTPLLRSRMAYSFY--LHMDMLDCVASTEDE------------YIAIALRLGTDAVYRSDTARRIRERQHLLWE 781
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: A0A6G0X0N4_9STRA (Glyco_transf_41 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0N4_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.100e-37 Identity = 123/385 (31.95%), Postives = 159/385 (41.30%), Query Frame = 1
Query: 1 LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVLES-PDRTIMMSEDDSYTEQQVVLLGGQGVWYPAPALPLELAPPPPSLSPHLLETATFGEHRHSNAAAAAQDLSAHAHNDTAEEVERTLPGITSSXXXXXXXXXXXXXXXXRSDQQSLATAEECDAGRAPREQRRNVLRAELKDRIGVDKGSVVYMCAQSIFKLHPRFDTAAKGVLEASISNHIVFTEGRKPKWTATFRERLRSTVGNEMMTRVIFVPRTT---EYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEKTCCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWE 1143
LD L+F D + +++ R+A +QAAF G P TSG P IDYF+SAD +ES PD + +S+ +QVVLL G G+WY +P AT G H SD +D VYMC QS++KL P FD +L + H+V + R+ WT F+ RL +T+ EM RV FVPR + LL+ A+V LHPFPFGGSKTSADAL LG+P VAM F RMA SF+ M L CI + Y+ A RLG D + + I I +Q LWE
Sbjct: 507 LDVLVFADIMSEPINYFTAFSRLAHVQAAFWGNPTTSGIPNIDYFISADNMESSPDPAV-----ESHYLEQVVLLSGLGIWYDEIEVP-----------------ATLGNH---------------------------------------------------SD-------------------------------YDLDPSWTVYMCPQSVYKLLPSFDAVLIEILRRDPAGHLVLLQARRLSWTQQFQARLAATMPREMHDRVHFVPRVAGNAPFLKLLSVADVVLHPFPFGGSKTSADALRLGIPLVAMKTPFLRSRMAYSFFVHMDLLD--CITTSEKE------------YIDKAVRLGTDRLYHDEIAQRIKAKQSMLWE 773
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Match: D7FUH1_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH1_ECTSI) HSP 1 Score: 150 bits (378), Expect = 1.280e-35 Identity = 103/226 (45.58%), Postives = 127/226 (56.19%), Query Frame = 1
Query: 622 QSIFKLHPRFDTAAKGVLEASISN-----------------HIVFTEGRKPKWTATFRERLRSTVGNEMMTRVIFVPRTT---EYFSLLASAEVALHPFPFGGSKTSADALALGVPTVAMAGKFAFGRMAQSFYKTMGLEKT----CCIASDVARQANSAIVHVAIVYVSLAARLGRDVEFRNRIVDLIDQRQWALWERRDEARMTLKSFFARFGGLSPPTPEEVS 1227
QS+FKL P FD + +L A +N ++V TEGR+ WT F RL S+V E++ +V +PR + E+ + LASA+V LHPFPFGGSKT+AD LALGVP VAM G GRMA S YKTMGLE+ CCIA R + YV LA RLGRD E+R +LI QR ALWERRD + F +R G PT EEV+
Sbjct: 613 QSLFKLKPDFDLVLRDILLAVNNNQNNGQMPNGEKENKNKAYLVLTEGRRKLWTEAFWRRLSSSVP-EVLPQVKILPRMSAGKEFRTFLASADVILHPFPFGGSKTAADGLALGVPVVAMEGDALPGRMAFSLYKTMGLERPGDGGCCIAKS--RDS----------YVELAVRLGRDAEYRRWAGNLIGQRSSALWERRD-VLLEWARFLSRAAGRISPTAEEVN 824 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.142.1 >prot_P-littoralis_Contig17.142.1 ID=prot_P-littoralis_Contig17.142.1|Name=mRNA_P-littoralis_Contig17.142.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=414bp LDALIFTDTTCDHVSFLLTLGRVAPIQAAFLGTPITSGDPAIDYFMSADVback to top mRNA from alignment at P-littoralis_Contig17:629746..633752- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.142.1 ID=mRNA_P-littoralis_Contig17.142.1|Name=mRNA_P-littoralis_Contig17.142.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4007bp|location=Sequence derived from alignment at P-littoralis_Contig17:629746..633752- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:629746..633752- >mRNA_P-littoralis_Contig17.142.1 ID=mRNA_P-littoralis_Contig17.142.1|Name=mRNA_P-littoralis_Contig17.142.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1242bp|location=Sequence derived from alignment at P-littoralis_Contig17:629746..633752- (Pylaiella littoralis U1_48)back to top |