mRNA_P-littoralis_Contig17.132.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: W4FKI4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FKI4_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.310e-18 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 3
Query: 462 WGSVLLVASGVFFVTSLYAIVFSKLMPP----MGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
WG V++ S +FF+T +Y IV +K++PP P++DAIR D HYCYLVPLTI + A+Y+SWVSLK+FR N
Sbjct: 15 WGYVIVSLSAIFFITFMYLIVVAKVLPPPTPGRSFPMMDAIRGDQHYCYLVPLTIPVAFIAMYVSWVSLKYFRQN 89
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A1V9YP10_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP10_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.790e-16 Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 3
Query: 396 PAPVDCPLGPEEEEAARXRTYFWGSVLLVASGVFFVTSLYAIVFSKLMP----PMGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
P+ +G E WG V++ S FF+T LY IV +KL+P P+ P+++ I++D +YCYL+PLTI A+Y++WVSLK+FRHN
Sbjct: 3 PSRTSSAVGGREGARIVSTGAIWGYVIVGLSFTFFMTFLYLIVVAKLLPAATDPLRFPMMETIQQDHYYCYLIPLTIPAGFIAMYVNWVSLKYFRHN 99
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A067BPD6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPD6_SAPPC) HSP 1 Score: 84.3 bits (207), Expect = 3.350e-16 Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 3
Query: 462 WGSVLLVASGVFFVTSLYAIVFSKLMPPMGHP----LLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
WG V++ S FF+T LY IV +KL+PP P +++ IR+D YCYL+PLTI A+Y++WVSLK+FRHN
Sbjct: 25 WGYVIVGLSFAFFMTFLYLIVVAKLLPPSDDPARFPMMETIRQDHFYCYLIPLTIPAGFIAMYINWVSLKYFRHN 99
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A6A4ZJ79_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ79_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.060e-15 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 3
Query: 462 WGSVLLVASGVFFVTSL-----------YAIVFSKLMPP----MGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
WG V++ S +FF+T + Y IV +K++PP P++DAIR D HYCYLVPLTI + A+Y+SWVSLK+FR N
Sbjct: 15 WGYVIVSLSAIFFITFMQVHLSSDVVIEYLIVVAKVLPPPTPGRSFPMMDAIRGDQHYCYLVPLTIPVAFIAMYVSWVSLKYFRQN 100
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A8J4PUN0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PUN0_9MYCE) HSP 1 Score: 84.7 bits (208), Expect = 8.540e-15 Identity = 35/75 (46.67%), Postives = 54/75 (72.00%), Query Frame = 3
Query: 450 RTYFWGSVLLVASGVFFVTSLYAIVFSKLMPPMGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
RT F+G ++L + +FF++S Y + FSKL+P G+ +LD I+ D +YC+LVP+ I + +Y +W+SLKFFRHN
Sbjct: 175 RTAFYGWIILFCTFIFFISSTYCLFFSKLLPDTGNKVLDFIKYDWYYCFLVPVLIPVTIITVYFNWLSLKFFRHN 249
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A1Y2GU76_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-domain-containing protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A1Y2GU76_9FUNG) HSP 1 Score: 80.5 bits (197), Expect = 1.380e-14 Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 3
Query: 453 TYFWGSVLLVASGVFFVTSLYAIVFSKLMPPMGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
TY WG +L ++ + F TS+YA+V S MP G+ LD I++DSHYC L+P+TI + A+ +W+ +K FRHN
Sbjct: 48 TYLWGYLLFFSTMIGFTTSMYALVASNYMPMTGNKTLDWIKQDSHYCMLLPVTIPVTVLAVLFNWLGMKLFRHN 121
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A1Y3MPZ7_PIRSE (Uncharacterized protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MPZ7_PIRSE) HSP 1 Score: 77.8 bits (190), Expect = 3.680e-14 Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 3
Query: 453 TYFWGSVLLVASGVFFVTSLYAIVFSKLMPPMGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
T+ G VLL + FV +Y++VFS+ M G+P+LD I+ D++YCYL+PL I ++++W S+KFFRHN
Sbjct: 4 THMAGWVLLFITYCVFVMGMYSVVFSRFMADTGNPVLDGIKNDNYYCYLIPLLIVIIYLFIFVNWFSMKFFRHN 77
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A2P6NM70_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NM70_9EUKA) HSP 1 Score: 75.9 bits (185), Expect = 2.950e-13 Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 3
Query: 465 GSVLLVASGVFFVTSLYAIVFSKLMPPMGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRH 671
G LL FF S++ I SK++P G+PLLD IRED HYCYL+PL++ + + +W+++KFFRH
Sbjct: 27 GICLLFLVFTFFGASVFTIYISKVLPETGNPLLDTIREDHHYCYLIPLSLMTTYLFFFNNWLAMKFFRH 95
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A484EGX8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGX8_BRELC) HSP 1 Score: 75.1 bits (183), Expect = 8.030e-13 Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 3
Query: 435 EAARXRTYFWGSVLLVASGVFFVTSLYAIVFSKLMPPMGHP------------------------LLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
+ A ++ WG V+++ + FF+T +YA++FSKL+ + H LL A +D +YCYLVPLTI + A Y +WVSLKFFRHN
Sbjct: 7 QRAGSTSHVWGYVIVLLAAFFFITCMYAMIFSKLLLLLPHSAPMINDNADNLVGFSSELGYESNSLLLAFEKDVYYCYLVPLTIPVTILACYANWVSLKFFRHN 110
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Match: A0A162TKT0_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162TKT0_PHYB8) HSP 1 Score: 70.5 bits (171), Expect = 4.140e-11 Identity = 35/105 (33.33%), Postives = 56/105 (53.33%), Query Frame = 3
Query: 360 GAVNSLRRQLHLPAPVDCPLGPEEEEAARXRTYFWGSVLLVASGVFFVTSLYAIVFSKLMPPMGHPLLDAIREDSHYCYLVPLTIYPSCAALYMSWVSLKFFRHN 674
G + + R +HLP E TY WG LL+++ + F ++Y+++ S MP +LD IR+D +YCY+VP+T + +W+ +KFFRHN
Sbjct: 31 GQIYARRMTVHLP------------ETLPDTTYLWGYFLLISTWLIFFITMYSLIGSHWMP-----VLDWIRDDDYYCYVVPVTAVVFIYFVVCNWMGMKFFRHN 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.132.1 >prot_P-littoralis_Contig17.132.1 ID=prot_P-littoralis_Contig17.132.1|Name=mRNA_P-littoralis_Contig17.132.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=175bp MVTTCVACFASRTDFANSLALLHPAVGVSRIDMIGYRNREGFLPPEASAAback to top mRNA from alignment at P-littoralis_Contig17:571414..575013+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.132.1 ID=mRNA_P-littoralis_Contig17.132.1|Name=mRNA_P-littoralis_Contig17.132.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3600bp|location=Sequence derived from alignment at P-littoralis_Contig17:571414..575013+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:571414..575013+ >mRNA_P-littoralis_Contig17.132.1 ID=mRNA_P-littoralis_Contig17.132.1|Name=mRNA_P-littoralis_Contig17.132.1|organism=Pylaiella littoralis U1_48|type=CDS|length=525bp|location=Sequence derived from alignment at P-littoralis_Contig17:571414..575013+ (Pylaiella littoralis U1_48)back to top |