mRNA_P-littoralis_Contig17.128.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI) HSP 1 Score: 855 bits (2209), Expect = 1.010e-294 Identity = 541/807 (67.04%), Postives = 584/807 (72.37%), Query Frame = 3
Query: 39 MSARQLNRLAKAKGLDPLLGGGLNVESEESDGLEDSADEGDKFGRAAVISASAFGEDSXXXXXXXXXXXXXXXXXXXXXXXXXEHETSLGASSRGNKLGTSQKVTQHSSGGTEAPLPSISTSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELQTGAASPLALLLRCDPRCLKLDRELRRKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRTRRGMLASRGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRWQLEAHRGAEWFVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVTVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELLYDGAAGIALQGLATTNASPAGGLAGGXXXXLAGETAAPPAXXXXXXXXXXXXXXXXXASEAEVFRRAYCSGSPIHKYLNLALSDFDESFALLPQDANVLDPRLMGPNFMNERVRLRVPPGAGXXXXXXXXXXXGGQDVLDEVLAMAMQVIGRQDAAARMRREAGGGGQGEEEGVLRGET*TPRLLWRS 2459
MSARQLNRLAKAKGLDPLLGGGLN ESEESDG DS +EGD+ R V+SASAFGE S XXXXXXXXXXXXXXXXXXXX G+ K+ GG + P + + L+ GA+SPLALLLRCDPRCLKLD+ELRRKFG XXXXXXXXXXXXXXXXXXXXXXXXXX +SASL LKRLVVSAPK+DWPKPPSFVGGGLGMK+CEAGAPAYLPRWQL+AH+GAEWFVFERSSSLEQLQ KFEA+Q MHDPN+LASF +RAPYHA+ALLQLGMVFAHTGQMDRASEFVGRSLYVLESA EAFRPVDGACRLD TLE+NKTYFAAMFRHMQM+GMVGGARTALEVGRLLLSLDPLGDPMGCLLALDS+ALTSRQG FL+ELHRSKLP+G SPS AAE AS G GV D V VTVQDLPGLSMSVCLA LDTTGD AAREAMAST+LRFPIMLEPLLEKCGV+PRST+YPHDWKSVMQHPHFGRA+DRLP GHVL HLA IFA+RGGELWKHERAEELLYDGA GIALQGL +T A+ AG XXXX A A+E EV +RAY GSPI KYL+L+LSDFDESFALLPQDAN+LDPRLMGPNFMNERVRLRVPPG GGQ+VLDEVLAMAMQVIGRQDAAARMRR+ G GQGE EG L + +L W++
Sbjct: 1 MSARQLNRLAKAKGLDPLLGGGLNEESEESDGCADSEEEGDELSRGGVVSASAFGEYSSEXXXXXXXXXXXXXXXXXXXX----------GGEAGDSTPIPTKLPAPEEGGRKQTAPGVEDD------------------------------------------DDEYLDSIISELARKAAAAEAGEGSPTDNLKLGASSPLALLLRCDPRCLKLDQELRRKFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSASLMLKRLVVSAPKDDWPKPPSFVGGGLGMKRCEAGAPAYLPRWQLDAHQGAEWFVFERSSSLEQLQRKFEAIQGMHDPNFLASFASRAPYHADALLQLGMVFAHTGQMDRASEFVGRSLYVLESATMEAFRPVDGACRLDATLEVNKTYFAAMFRHMQMAGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSHALTSRQGGFLIELHRSKLPVGRSPSRAAEAFAS---GAGVDGD-VGVTVQDLPGLSMSVCLATLDTTGDSTAAREAMASTMLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRAKDRLPAGHVLLHLARIFAQRGGELWKHERAEELLYDGA-GIALQGLPSTPATREA--AGXXXXXXXXXXXA----------GTIGADFCPSAAEVEVVQRAYGEGSPIQKYLDLSLSDFDESFALLPQDANILDPRLMGPNFMNERVRLRVPPGV-VPGGGGERGWGGGQEVLDEVLAMAMQVIGRQDAAARMRRQGGRRGQGEAEGNLSPSSPLAQLFWQT 737
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE) HSP 1 Score: 768 bits (1982), Expect = 7.860e-264 Identity = 413/553 (74.68%), Postives = 446/553 (80.65%), Query Frame = 3
Query: 813 MLASRGGN--SLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRWQLEAHRGAEWFVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQ--MDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVTVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELLYDGAAGIALQGLATTNASPAGGLAGGXXXXLAGETAAPPAXXXXXXXXXXXXXXXXXASEAEVFRRAYCSGSPIHKYLNLALSDFDESFALLPQDANVLDPRLMGPNFMNERVRLRVPPGAGXXXXXXXXXXXGGQDVLDEVLAMAMQVIGRQDAAARMRREAGGGGQGEEEGVLRGET*TPRLLWRS 2459
M+ RGGN S+SASLTLKRLVVSAPKEDWPKPPSFVGGGLGMK+CEAGAPAYLP+WQL+AH+GAEWFVFERSSSLEQLQ KFEA+Q MHDPN+LASF +RAPYHA+ALLQLGMVFAHTGQ MDRASEFVGRSLYVLESA EAFRPVDGACRLD TLE+NKTYFAAMFRHMQM+GMVGGARTALEV RLLLSLDPLGDPMGCLLALDS+AL SRQGEFL+ELHRSKLP+G SPS AAE AS A G V VTVQDLPGLSMSVCLA LDTTGD AAREAMASTLLRFPIMLEPLLEKCGV+PRST+YPHDWKSVMQHPHFGRA+DRLP GHVL HLA IFA+RGGELWKHERAEELLYDGA GIALQGL +T A+ AG + P A+E EV +RAY GSPI KYL+LALSDFDESFALLPQDAN+LDPRLMGPNFMNERVRLRVPPG GGQ+VLDEVLAMAMQVIGRQDAAARMRR+ +G L + +L W++
Sbjct: 1 MMVGRGGNNNSVSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKRCEAGAPAYLPKWQLDAHQGAEWFVFERSSSLEQLQRKFEAIQGMHDPNFLASFASRAPYHADALLQLGMVFAHTGQASMDRASEFVGRSLYVLESATMEAFRPVDGACRLDATLEVNKTYFAAMFRHMQMAGMVGGARTALEVCRLLLSLDPLGDPMGCLLALDSHALASRQGEFLIELHRSKLPVGRSPSRAAEAFASGADVDG----GVCVTVQDLPGLSMSVCLATLDTTGDSTAAREAMASTLLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRAKDRLPAGHVLLHLARIFAQRGGELWKHERAEELLYDGA-GIALQGLPSTPATREAAGAGAEEAGIIYADFCP------------------SAAEVEVVQRAYGEGSPIQKYLDLALSDFDESFALLPQDANILDPRLMGPNFMNERVRLRVPPGV-VPGGGGERGWGGGQEVLDEVLAMAMQVIGRQDAAARMRRQGRXXXXXAADGNLSPSSPLAQLFWQT 529
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: A0A835ZGE8_9STRA (Transcriptional repressor TCF25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE8_9STRA) HSP 1 Score: 331 bits (848), Expect = 1.950e-94 Identity = 268/578 (46.37%), Postives = 317/578 (54.84%), Query Frame = 3
Query: 633 ASPLALLLRCDPRCLKLDRELRRKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRTRRGMLASRGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRWQLEAHRG-AEWFVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPS-----------------------GAAEILASVAYGKGVPNDRVDVTVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVS-PRSTSYPHDWKSVMQHPHFGRAQDRLPP-------GHVLFHLASIFARRGGELWKHERAEELLYDGAAGIALQGLATTNASPAGGLAGGXXXXLAGETAAPPAXXXXXXXXXXXXXXXXXASEAEVFRRAY-CSGSPIHKYLNLALSDFDESFAL--LPQDANVLDPRLMGPNFMNERVRLRVPPGAG 2261
AS L LL CDPR L +D E+RRKFG XXXXXXXXXXXXXXXXXXXXXXXX KEDW +PPS VGGGLGM++ A PA+LPR Q AH G A+WF + S + Q +FEA Q DPN +A + +AP+HA+ALLQLGMV+AHTGQMD ASEFV R LYVLE A E + G R+DVT N T F A+FRH Q M+G RTA+EV LLLSLDP+GDPMG LL +D +AL ++G F+L L S LPIG SP+ A S A G V + VTV DLPGL++S LA LD GD AAR A L RFP LEPLL G R+ ++P DWKSV + HFG A H L HL +I+A R GELW+ + +ELLYDGA G+ALQG AGGXXXX XXXXXX E EV RAY SP+ KYL L+ +DF ++ A LP D N+L+P L P + RLR GAG
Sbjct: 151 ASALDALLACDPRALSVDAEMRRKFGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXKEDWSRPPSLVGGGLGMER--AAPPAWLPRRQRAAHGGGAQWFAYRWSEEYARAQQRFEAAQATADPNNVALLLWQAPHHADALLQLGMVYAHTGQMDHASEFVRRCLYVLECAVLEPCKLASGRVRMDVTHPPNATLFGALFRHAQQCSMMGCRRTAMEVSHLLLSLDPIGDPMGALLCVDCHALACKEGRFVLSLAASGLPIGFSPALLEMDWAARGGSXXXXXXXALDPSDASPDTSTAGGSDVSDGAPLVTVADLPGLALSAALAHLDA-GDAAAARAAARRALRRFPAALEPLLAAAGAPHARTQAHPVDWKSVFRSAHFGGAXXXXXXXXXXXXVAHPLAHLCAIYAARAGELWRRDDTQELLYDGA-GLALQG------------AGGXXXXXXXXXXX-----XXXXXXDAGADDACCEEEREVLARAYRLKDSPLLKYLALSPADFSDAAAYQQLPHDVNILNPALAAPQMLPPGRRLR---GAG 703
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: A0A6G0PRE5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PRE5_9STRA) HSP 1 Score: 227 bits (578), Expect = 3.910e-59 Identity = 138/364 (37.91%), Postives = 200/364 (54.95%), Query Frame = 3
Query: 825 RGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRW-QLEAHRGAEW------FVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVTVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELL 1895
RG +A + K++++ +P ++WP+PP+FVGGG+ RW + +GA W F S + ++LQ +FE +QR HDPN +A F+ R PYH +ALL + VF H GQMD A++ + R +YVLE A + F G CR+D+ E N +F A+F M+ G G R+A E +LLLSLDP GDPM LLA+D YALTSRQ +FL++L SK P + + E+ + GK + D T+ LP L S+ LA G+ A++ +A+ LL+FP ML+P LEK +P S+S W+ ++ F A+ VL HL I+ R +WK A+ L
Sbjct: 205 RGDPRSAARVATKKVMMVSPLDEWPRPPTFVGGGI--------------RWTRSNKPKGAGWNSLCNYFEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDSIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNAGFFKALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFDSKTP-AVDRFASGEVASKKKAGKKASS--ADETIAALPNLQFSLALAHF-FLGNETEAKDLLAAALLKFPTMLKPFLEKIAANPSSSS----WQPILSSRVFANARSVEGEHSVLQHLLDIYVTRNHSIWKVNAAQSFL 546
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: G4YZT6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT6_PHYSP) HSP 1 Score: 232 bits (591), Expect = 1.390e-58 Identity = 160/465 (34.41%), Postives = 227/465 (48.82%), Query Frame = 3
Query: 825 RGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRW-QLEAHRGAEW------FVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVTVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELLYDGAAGIALQGLATTNASPAGGLAGGXXXXLAGETAAPPAXXXXXXXXXXXXXXXXXASEAEVFRRAYCSGSPIHKYLNLALSDFDESFALLPQDANVLDP 2198
RG +A + K++++ P ++WP+PP+FVGGG+ RW + +GA W F S + ++LQ +FE +QR HDPN +A F+ R PYH +ALL + VF H GQMD AS+ + R +YVLE A + F G CR+D+ E N +F A+F M+ G G R+A E +LLLSLDP GDPM LLA+D YALTSRQ FL++L SK P + ++E + GK D T+ LP L +S+ LA G+ A++ +A+ LL+FP ML+PLLEK V+P S+S W+ ++ F A+ VL HL I+ R +WK A+ L LQG ASPA ++ +V C +HKYL +D+ + LP D +L P
Sbjct: 646 RGDPRSAARVATKKVMMVTPLDEWPRPPTFVGGGI--------------RWTRSNKPKGAGWNSLCNYFEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHASDCIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNAGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCRFLIDLFGSKTP-AVDRLASSEAASKKKAGK--KTSSADETIAALPNLQISLALAHF-FLGNETEAKDLLAAALLKFPTMLKPLLEKIAVNPSSSS----WQPILSSRVFANARSVDGEHSVLQHLLDIYVTRNHSIWKVNDAQSFL--------LQGAQHALASPA-----------------------------------LVSANPQVLELPSC----LHKYLRALSADYSDEITTLPADHPMLQP 1041
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: W2QZ72_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=W2QZ72_PHYPN) HSP 1 Score: 220 bits (561), Expect = 3.090e-57 Identity = 137/366 (37.43%), Postives = 199/366 (54.37%), Query Frame = 3
Query: 825 RGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRW-QLEAHRGAEW------FVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVT--VQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELL 1895
RG +A + +K++++ +P ++WP+PP+FVGGG+ RW + +GA W + S + ++LQ +FE +QR HDPN +A F+ R PYH +ALL + VF H GQMD A++ + R +YVLE A + F G CR+D+ E N +F A+F M+ G G R+A E +LLLSLDP GDPM LLA+D YALTSRQ +FL++L SK P A + AS K + + + LP L S+ LA G+ A+E +A+ LL+FP +L+PLLEK +P S+S W+ ++ F A+ VL HL I+ R +WK A+ L
Sbjct: 167 RGDPRTAARVAVKKVMMVSPLDEWPRPPTFVGGGI--------------RWTRSNKPKGAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-------AVDRFASDEAKKTSWKSSIGASDSIAALPNLQFSLALAHF-FVGNESEAKEKLATALLKFPTILKPLLEKIAANPSSSS----WQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWKVNDAQSFL 506
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: A0A2P4YEU9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YEU9_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.700e-56 Identity = 138/370 (37.30%), Postives = 201/370 (54.32%), Query Frame = 3
Query: 825 RGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRW-QLEAHRGAEW------FVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDV------TVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELL 1895
RG +A +T +++++ +P ++WP+PP+FVGGG+ RW + +GA W F S + ++LQ +FE +QR HDPN +A F+ R PYH +ALL + VF H GQMD A++ + R +YVLE A + F G CR+D+ E N ++ A+F M+ G G R+A E +LLLSLDP GDPM LLA+D YALTSRQ +FL++L SK P+ ++ PN + TV DLP L S+ LA G+ A++ +A+ LL+FP ML+ LLEK +P S+S WK ++ F A++ +VL HL I+ R +WK A+ L
Sbjct: 515 RGDPRSAARVTTRKVMMVSPLDEWPRPPTFVGGGI--------------RWTRSNKPKGAGWNSLCNYFEITWSMAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDNATDCIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNAGFYKALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLVASKTPVA----------DRFSHSDTRPNKAIKTSAGTSDTVADLPNLQFSLALAHF-FLGNESEAKDLLAAALLKFPTMLKSLLEKIAANPSSSS----WKPILSSRVFANARNLDGEHNVLQHLLDIYVTRNHSIWKVNDAQSFL 855
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: A0A0N7L4G6_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4G6_PLAHL) HSP 1 Score: 217 bits (553), Expect = 3.340e-56 Identity = 152/470 (32.34%), Postives = 226/470 (48.09%), Query Frame = 3
Query: 825 RGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRWQLEAHRGAEWFVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVTVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELLYDGAAGIALQGLATTNASPAGGLAGGXXXXLAGETAAPPAXXXXXXXXXXXXXXXXXASEAEVFRRAYCSGSPIHKYLNLALSDFDESFALLPQDANVLDPRLMGPNFMNERV 2234
RG +A L K++++ +P ++WP+PP+FVGGG+ + P + W H ++ S + +LQ +FE +QR HDPN +A F+ R PYH +ALL + F H GQMD+A++ + R +YV E A T+ F G CR+D+ + N +F A+F HM+ G G R+A E +LLLSLDP GDPM LLA+D YALTSRQ +F+++L SKLP+ + + K P D D +V LP L S+ LA G+ A+ +A+ LL++P +L+PLLEK V S+ W+ ++ F + VL HL I+ R +WK + L LQ ASPA ++ A+V + C +HKY +D+ + LP D +L P P NE++
Sbjct: 159 RGDPRSAARLIAKKVMMVSPLDEWPRPPTFVGGGIRWTRSNK--PKGIG-WNSLCH----YYEVTWSIAYRKLQDEFELLQRTHDPNLIAHFLQRHPYHIDALLTMSEFFQHHGQMDQATDCIKRCIYVFELAWTDQFDVCKGNCRMDIQTKNNDGFFRALFMHMKQIGRRGCMRSAFETAKLLLSLDPHGDPMNVLLAIDYYALTSRQYQFVIDLSDSKLPV-VDRIACETTMLRKKSNKAAPLDTSD-SVLALPNLEFSLALAQF-FLGNESEAKTKLATALLKYPAVLKPLLEKIAVDVSSSQ----WQPILSSCAFANVCNVGEEQSVLQHLLDIYVTRNHSIWKANNVQSFL--------LQSAQYALASPA-----------------------------------FVSAIAQVLKLPAC----LHKYARAVKADYSDEVTTLPADHPMLQP----PQVENEQL 563
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: H3GG52_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG52_PHYRM) HSP 1 Score: 224 bits (570), Expect = 5.400e-56 Identity = 135/357 (37.82%), Postives = 195/357 (54.62%), Query Frame = 3
Query: 825 RGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRWQLEAHRGAEWFVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVTVQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELL 1895
RG +A +T K++++ +P ++WP+PP+FVGGG+ + A W H +F S + ++LQ +FE +QR HDPN +A F+ R PYH +ALL + VF H GQMD AS+ + R +YVLE A + F G CR+D+ E N +F A+F M+ G G R+A E +LLLSLDP GDPM +LA+D YALTSRQ +FL++L SK P +S + K T+ LP L S+ LA G+ A++ +A+ LL+FP +L+PLLEK +P S+S W+ ++ F A+ VL HL I+ R +WK A+ L
Sbjct: 453 RGDPRSAARVTTKKVMMVSPLDEWPRPPTFVGGGIRWTRSNKPKGA---GWNSLCH----YFEITWSMAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHASDSIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNGGFFKALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVILAIDYYALTSRQCQFLIDLSNSKTP------AVDRFASSDSSTKKKTTSSASDTIAVLPNLQFSLALAHF-FLGNETEAKDLLAAALLKFPTILKPLLEKIAANPSSSS----WQPILSSRVFANARSVDGEHSVLQHLLDIYVTRNHSIWKVNDAQMFL 791
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Match: V9EAW3_PHYPR (EDR2_C domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EAW3_PHYPR) HSP 1 Score: 220 bits (560), Expect = 1.690e-55 Identity = 137/366 (37.43%), Postives = 199/366 (54.37%), Query Frame = 3
Query: 825 RGGNSLSASLTLKRLVVSAPKEDWPKPPSFVGGGLGMKKCEAGAPAYLPRW-QLEAHRGAEW------FVFERSSSLEQLQGKFEAVQRMHDPNYLASFVARAPYHAEALLQLGMVFAHTGQMDRASEFVGRSLYVLESAATEAFRPVDGACRLDVTLEINKTYFAAMFRHMQMSGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSYALTSRQGEFLLELHRSKLPIGLSPSGAAEILASVAYGKGVPNDRVDVT--VQDLPGLSMSVCLAILDTTGDVMAAREAMASTLLRFPIMLEPLLEKCGVSPRSTSYPHDWKSVMQHPHFGRAQDRLPPGHVLFHLASIFARRGGELWKHERAEELL 1895
RG +A + +K++++ +P ++WP+PP+FVGGG+ RW + +GA W + S + ++LQ +FE +QR HDPN +A F+ R PYH +ALL + VF H GQMD A++ + R +YVLE A + F G CR+D+ E N +F A+F M+ G G R+A E +LLLSLDP GDPM LLA+D YALTSRQ +FL++L SK P A + AS K + + + LP L S+ LA G+ A+E +A+ LL+FP +L+PLLEK +P S+S W+ ++ F A+ VL HL I+ R +WK A+ L
Sbjct: 420 RGDPRTAARVAVKKVMMVSPLDEWPRPPTFVGGGI--------------RWTRSNKPKGAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-------AVDRFASDEAKKTSWKSSIGASDSIAALPNLQFSLALAHF-FLGNESEAKEKLATALLKFPTILKPLLEKIAANPSSSS----WQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWKVNDAQSFL 759 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.128.1 >prot_P-littoralis_Contig17.128.1 ID=prot_P-littoralis_Contig17.128.1|Name=mRNA_P-littoralis_Contig17.128.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=799bp MSARQLNRLAKAKGLDPLLGGGLNVESEESDGLEDSADEGDKFGRAAVISback to top mRNA from alignment at P-littoralis_Contig17:561625..571284- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.128.1 ID=mRNA_P-littoralis_Contig17.128.1|Name=mRNA_P-littoralis_Contig17.128.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9660bp|location=Sequence derived from alignment at P-littoralis_Contig17:561625..571284- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:561625..571284- >mRNA_P-littoralis_Contig17.128.1 ID=mRNA_P-littoralis_Contig17.128.1|Name=mRNA_P-littoralis_Contig17.128.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2397bp|location=Sequence derived from alignment at P-littoralis_Contig17:561625..571284- (Pylaiella littoralis U1_48)back to top |