mRNA_P-littoralis_Contig168.76.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.800e-21 Identity = 57/115 (49.57%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 209 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLE 318
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5KKK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK4_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 5.040e-21 Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 19 RFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
+FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E + R A D ++ V T+E+L +V+ ++F L NMDQT +Q EMP +TT+E
Sbjct: 127 KFNSWYQRFRKRNGFSIRRRTSVGQKLPKGHEGMAWATVMKLRETLSKRAGE--IYARRHPPAPDESPIK---GVDLTSEQLASVEAEVFEELGNMDQTQVQHEMPVETTLE 233
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 6.710e-21 Identity = 57/115 (49.57%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ FN WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 150 FKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVKAEVFEELGNMDQTPVQHEMPVETTLE 259
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5JCV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV1_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 7.440e-21 Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ +FN+WY RF KRH SIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A + T ++ T+E+L +V+ ++F L NMDQTP+Q EMP +TT++
Sbjct: 249 FKVKFNSWYQRFRKRHGSSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLD 358
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.390e-20 Identity = 56/115 (48.70%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L A E + R A D ++ E D+ T E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGE--IYARRHPPAPDESPIKGE-DL--TFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLE 136
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5JAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU0_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.530e-20 Identity = 53/115 (46.09%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ +FN+WY RF KRH SIR++TSVGQK P+G+EG AWA + KLR +L + A E + R A + T ++ T+E+L +V+ ++F L NMDQTP+Q EMP +TT++
Sbjct: 195 FKVKFNSWYQRFRKRHGSSIRQRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLD 304
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 3.070e-20 Identity = 56/115 (48.70%), Postives = 79/115 (68.70%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q E+P +TT+E
Sbjct: 27 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLE 136
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5L6D5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D5_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 3.070e-20 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ +FN+WY F KR+ FSIRR+TSVGQK P+G+EG A A + KLR +L + A E + R A D ++ E D+ T+E+L +V+ K+F L NMDQTP+Q EMP + T+E
Sbjct: 27 FKVKFNSWYQWFRKRNGFSIRRRTSVGQKLPKGYEGVAGATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAKVFEELGNMDQTPVQHEMPVENTLE 136
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5KMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV6_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 3.120e-20 Identity = 54/115 (46.96%), Postives = 75/115 (65.22%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ FN+WY RF R+ FSIRR+TSV +K P+G+EG AWA + KLR +L E A E + R A D ++ E D+ T+E+L +V+ +F L NMDQ P+Q EMP +TT+E
Sbjct: 27 FKIEFNSWYQRFRMRNGFSIRRRTSVDKKLPKGYEGMAWATVMKLREALVERAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEADVFEELGNMDQLPVQDEMPVETTLE 136
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Match: A0A6H5KRF0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF0_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 4.080e-20 Identity = 55/115 (47.83%), Postives = 79/115 (68.70%), Query Frame = 1
Query: 10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVE 354
F+ +FN+WY RF KR+ FSIRR+TSV QK P+G+EG AWA + KLR +L + A E + R A + ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+E
Sbjct: 238 FKVKFNSWYQRFRKRNGFSIRRRTSVAQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPEESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLE 347 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig168.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig168.76.1 >prot_P-littoralis_Contig168.76.1 ID=prot_P-littoralis_Contig168.76.1|Name=mRNA_P-littoralis_Contig168.76.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=118bp MEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSback to top mRNA from alignment at P-littoralis_Contig168:424264..424617- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig168.76.1 ID=mRNA_P-littoralis_Contig168.76.1|Name=mRNA_P-littoralis_Contig168.76.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=354bp|location=Sequence derived from alignment at P-littoralis_Contig168:424264..424617- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig168:424264..424617- >mRNA_P-littoralis_Contig168.76.1 ID=mRNA_P-littoralis_Contig168.76.1|Name=mRNA_P-littoralis_Contig168.76.1|organism=Pylaiella littoralis U1_48|type=CDS|length=354bp|location=Sequence derived from alignment at P-littoralis_Contig168:424264..424617- (Pylaiella littoralis U1_48)back to top |