mRNA_P-littoralis_Contig168.41.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 230 bits (586), Expect = 1.050e-69 Identity = 116/142 (81.69%), Postives = 124/142 (87.32%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKV 427
F+ KFN+WYQRFR+R GFSIRRRTSVGQKLP G EGMAWATVMKLR+AL++RAGEIY RHP P ESPIKGEDLTSEQL SV VFEELGNMD +PVQHE+PVETTLEKTGAKDARISTGGKEKERFTL AVM DG KV
Sbjct: 27 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKV 168
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 226 bits (577), Expect = 6.760e-69 Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKV 427
F+ K N+WYQRFR+R GFSIRRRTSVGQKLP G+EGMAWATVMKLR+AL++RAGEIY RHP P ESPIKGEDLT EQL SV VF+ELGNMD +PVQHEMPVETTLEKTGAKDARISTGGKEKERFTL AVM DG KV
Sbjct: 27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKV 168
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 231 bits (589), Expect = 2.520e-68 Identity = 116/142 (81.69%), Postives = 125/142 (88.03%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKV 427
F+ KFN+WYQRFR+R GFSIRRRTSVGQKLP G+EGMAWATVMKLR+AL++RAGEIY RHP P ESPIKGEDLTSEQL SV VFEELGNMD +PVQHEMPVETTLEKTGAKDARISTGG+EKERFTL AVM DG KV
Sbjct: 209 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKV 350
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE) HSP 1 Score: 221 bits (563), Expect = 1.910e-67 Identity = 114/142 (80.28%), Postives = 122/142 (85.92%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKV 427
F+ KFN+WYQRFR+R GFSIRRRTSV QKL G+EGMA ATVMKLR+AL++RAGEIY RHP P ESPIKGEDLTSEQL SV VFEELGNMD +PVQHEMPVETTLEKTGAKDARISTGGKEKERFTL AVM DG KV
Sbjct: 194 FKVKFNSWYQRFRKRNGFSIRRRTSVRQKLQKGYEGMASATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKV 335
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 223 bits (568), Expect = 8.860e-66 Identity = 113/143 (79.02%), Postives = 122/143 (85.31%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKVP 430
FR KF NWY RFR R G SIRRRTSVGQKLPTG+EG+A+AT+MKLR ALL+RAGEIY R+P GESPIKG+DL+ QLESVA VFEELGNMD +PVQ EMPVETTLEK GAKDARISTGGKEKERFTLC AVM DGGKVP
Sbjct: 200 FRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVP 342
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5JB72_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB72_9PHAE) HSP 1 Score: 221 bits (562), Expect = 1.340e-65 Identity = 110/143 (76.92%), Postives = 122/143 (85.31%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKVP 430
F+ KF NW+ RFR RRG SIRR T+VGQKLPTG+EG+A+AT+MKLR ALL+RAGEIY RHP P ESPIKG+DL+ QLESVA VFEELGNMD +PVQ EMPVETTLEK GAKDARISTGGKEK+RFTLC AVM DGGKVP
Sbjct: 122 FKTKFKNWHHRFRERRGVSIRRHTNVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRHPPAPDESPIKGKDLSPAQLESVAAEVFEELGNMDQTPVQQEMPVETTLEKRGAKDARISTGGKEKDRFTLCLAVMADGGKVP 264
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 221 bits (563), Expect = 6.560e-65 Identity = 113/145 (77.93%), Postives = 121/145 (83.45%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKV-PC 433
F+ KFN+WYQRFR+R GFSIRRR SVGQKLP G+EGMAWATV KLR+AL++RAGEIY RHP P ESPIKGEDLTSEQ SV VFEELGNMD +PVQHEMPVETTLE TG KDARISTGGKEKERFTL AVM DG V PC
Sbjct: 181 FKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPC 325
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE) HSP 1 Score: 214 bits (544), Expect = 2.610e-64 Identity = 109/142 (76.76%), Postives = 119/142 (83.80%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKV 427
F+ KFN+WYQRFR+R GF IRRRTSVGQKLP G+EGMAWATVMKLR+AL++RAGEIY RHP ESPIKGEDLTSEQL SV VFEE+G M +PVQHE+PV TLEKTGAKDARISTGGKEKERFTL AVM DG KV
Sbjct: 178 FKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAHDESPIKGEDLTSEQLASVEAEVFEEVGIMGQTPVQHEVPVAITLEKTGAKDARISTGGKEKERFTLVLAVMADGKKV 319
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 224 bits (572), Expect = 7.530e-64 Identity = 110/141 (78.01%), Postives = 123/141 (87.23%), Query Frame = 2
Query: 8 AKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLCFAVMTDGGKVP 430
+KF +WYQRF +R FSIRRRTSVGQKLP GHEGMAWAT+MKLRKALL+RAGEIY +R+P PGESPI+GEDL+S QLE V + +FEELGNMD +PVQHEMPVETTLE TGAKDARI+TGGKEKERFTLC AV DG KVP
Sbjct: 183 SKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVP 323
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 215 bits (547), Expect = 4.560e-62 Identity = 111/143 (77.62%), Postives = 120/143 (83.92%), Query Frame = 2
Query: 2 FRAKFNNWYQRFRRRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAVFEELGNMDLSPVQHEMPVETTLEKTGAKDARISTGG-KEKERFTLCFAVMTDGGKV 427
F+ KFN+WYQRFR+R GFSIRRRTSVGQKLP G+EGMAWATVMKL +AL++RAGEIY RHP P ESPIKGEDL SEQL SV VFEE+GNMD PVQHEMPVETTL+KTGAKDARISTGG EKERFTL AV DG KV
Sbjct: 221 FKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKV 363 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig168.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig168.41.1 >prot_P-littoralis_Contig168.41.1 ID=prot_P-littoralis_Contig168.41.1|Name=mRNA_P-littoralis_Contig168.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=189bp MAWATVMKLRKALLQRAGEIYEERHPSPPGESPIKGEDLTSEQLESVAEAback to top mRNA from alignment at P-littoralis_Contig168:175666..176895- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig168.41.1 ID=mRNA_P-littoralis_Contig168.41.1|Name=mRNA_P-littoralis_Contig168.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1230bp|location=Sequence derived from alignment at P-littoralis_Contig168:175666..176895- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig168:175666..176895- >mRNA_P-littoralis_Contig168.41.1 ID=mRNA_P-littoralis_Contig168.41.1|Name=mRNA_P-littoralis_Contig168.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=567bp|location=Sequence derived from alignment at P-littoralis_Contig168:175666..176895- (Pylaiella littoralis U1_48)back to top |