mRNA_P-littoralis_Contig167.74.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: D7G7B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B6_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 2.730e-19 Identity = 90/111 (81.08%), Postives = 97/111 (87.39%), Query Frame = 3
Query: 24 MLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLALFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMXXXXXXXXGDY 356
MLLVLGGNA+PTKEDVT AL AVG++ DE+RLD L+ D+AGKDI LI AGKGKLA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +DMGGGMDM XXXX GDY
Sbjct: 1 MLLVLGGNASPTKEDVTTALAAVGIECDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMFXXXXEGGGDY 110
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 6.130e-19 Identity = 81/107 (75.70%), Postives = 94/107 (87.85%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLALFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDM 323
MRHLA YM+LVLGGNA+P+ EDVT AL +VG++ DE+RL L+ ++ GKD+NE++ AGK KLA GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDM
Sbjct: 1 MRHLAVYMMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDM 107
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A0B7JZV0_BIOOC (Uncharacterized protein n=1 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A0B7JZV0_BIOOC) HSP 1 Score: 85.1 bits (209), Expect = 1.630e-16 Identity = 40/63 (63.49%), Postives = 52/63 (82.54%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLA 191
M+HLA Y+LL LGGN +P+ +D+TA LE+VG +VD RLD+L+++L GKDINELIAAG KLA
Sbjct: 1 MKHLAAYLLLSLGGNTSPSAKDITAVLESVGAEVDSDRLDTLISELEGKDINELIAAGSEKLA 63
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A5Q4BY71_9PEZI (60S acidic ribosomal protein P2 n=5 Tax=Colletotrichum destructivum species complex TaxID=2707350 RepID=A0A5Q4BY71_9PEZI) HSP 1 Score: 84.0 bits (206), Expect = 4.220e-16 Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLA 191
M+HLA Y+LL LGGN AP+ +DV LE+VG++ DE RL++L+++L GKDINELIA G GKLA
Sbjct: 1 MKHLAAYLLLSLGGNTAPSAQDVKTVLESVGIEADEERLNTLISELKGKDINELIAEGSGKLA 63
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A2D4BM79_PYTIN (Ribosomal protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM79_PYTIN) HSP 1 Score: 83.2 bits (204), Expect = 4.360e-16 Identity = 39/66 (59.09%), Postives = 53/66 (80.30%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLALFG 200
MR++A Y+L +LGGNAAP+ DVTA L +VGV+VD RL+ ++++L GKD+NE+IAAG KLA FG
Sbjct: 3 MRYIAAYLLAILGGNAAPSAADVTAILSSVGVEVDAERLNQVISELEGKDVNEIIAAGSKKLAKFG 68
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A194WT18_9HELO (Ribosomal protein 60S n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194WT18_9HELO) HSP 1 Score: 84.0 bits (206), Expect = 4.580e-16 Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLA 191
M+HLA Y+LL LGGN++P+ +D+TA LE+VG++ DE RL +LL +L GKDINELIA G KLA
Sbjct: 1 MKHLAAYLLLTLGGNSSPSAKDITAVLESVGIEADEERLTTLLKELEGKDINELIAEGSSKLA 63
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A6V1TF33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TF33_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 4.580e-16 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLALFG 200
MRHLA Y++LVLGGNA+PT EDVT AL +VGV+VD RL++L+ +L GKD+ EL+ G KLA FG
Sbjct: 1 MRHLACYLMLVLGGNASPTAEDVTNALASVGVEVDSERLETLIKELEGKDVEELMKEGAEKLASFG 66
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A1E7EY82_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EY82_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 6.470e-16 Identity = 40/66 (60.61%), Postives = 53/66 (80.30%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLALFG 200
M+ LATY++L +GGNA P+K+++TA+L AVGV+VD + LD L TDL GKDI EL+ AGK +LA FG
Sbjct: 1 MKELATYLMLQIGGNATPSKDEITASLSAVGVEVDTASLDKLYTDLEGKDIAELMEAGKAQLAKFG 66
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A4U0XIG1_9PEZI (60S acidic ribosomal protein P2 n=1 Tax=Cryomyces minteri TaxID=331657 RepID=A0A4U0XIG1_9PEZI) HSP 1 Score: 83.2 bits (204), Expect = 8.640e-16 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLA 191
M+HLA Y+LL LGGN +P+ ED+ LEAVG++ DE+RLD L+ +L GKDINELIA G KLA
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAEDIKGVLEAVGIEADETRLDKLIEELKGKDINELIAEGSSKLA 63
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Match: A0A420XZQ7_9PEZI (60S acidic ribosomal protein P2 n=2 Tax=leotiomyceta TaxID=716546 RepID=A0A420XZQ7_9PEZI) HSP 1 Score: 82.8 bits (203), Expect = 1.120e-15 Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 3
Query: 3 MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDINELIAAGKGKLA 191
M+HLA Y+LL LGGNA+P+ +D+T+ LE+VG++ D RL+ LL++L GKDINELIA G KLA
Sbjct: 1 MKHLAAYLLLQLGGNASPSAKDITSVLESVGIEADNERLEKLLSELEGKDINELIAEGSSKLA 63 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig167.74.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig167.74.2 >prot_P-littoralis_Contig167.74.2 ID=prot_P-littoralis_Contig167.74.2|Name=mRNA_P-littoralis_Contig167.74.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=119bp MRHLATYMLLVLGGNAAPTKEDVTAALEAVGVDVDESRLDSLLTDLAGKDback to top mRNA from alignment at P-littoralis_Contig167:431185..436041- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig167.74.2 ID=mRNA_P-littoralis_Contig167.74.2|Name=mRNA_P-littoralis_Contig167.74.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4857bp|location=Sequence derived from alignment at P-littoralis_Contig167:431185..436041- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig167:431185..436041- >mRNA_P-littoralis_Contig167.74.2 ID=mRNA_P-littoralis_Contig167.74.2|Name=mRNA_P-littoralis_Contig167.74.2|organism=Pylaiella littoralis U1_48|type=CDS|length=357bp|location=Sequence derived from alignment at P-littoralis_Contig167:431185..436041- (Pylaiella littoralis U1_48)back to top |