mRNA_P-littoralis_Contig167.23.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 541 bits (1393), Expect = 1.270e-178 Identity = 294/560 (52.50%), Postives = 366/560 (65.36%), Query Frame = 3
Query: 366 MESSLGQRRKEMAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVSTLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTSTDSLGSKDVFAADEAPLLPYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWTPSE---QVLTPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGTGPAFGKPPNL-RVRRDLNHRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTG-DFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHGTRMTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLIDCRPSVFAKILDVLRMRKRALWAGNDGQEAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVKP 2030
ME+ L QRRKEM+QAW+D+D+GW EL Q + GIT PS + +G+++LNVGGSH+N RR +L KE A LG +FE VWD RLPRDSDGRIVLDESPACVKHLIH L+E SG + SL D A DE LPYVARALGLS P GM V GG+T L E+G LT LQGWCP + L+YRASRDGW+ + F+ CG+N+P + TL+RV + S+VGGFSSVPW+P + S GAF+FMLKD + G ++F+PVKWG + + V + GP FG+ + LQ SY++P+ S F L+G+ +TE EVF+V + A + P+KR K+ G A T + T + DA+ FG A+AGALMEER+AL QA+ +L+QA A ALA +YGP VA G D VVELSV GTRMTT RSTLQAC ESALAA F+ +KWP T+KDVD +G RLI+C P+VF K+LDVLRMRKRA WA +D EL V + A DRP+FD+FVNMYFPG ENFI D V P
Sbjct: 1 MEAVLSQRRKEMSQAWEDVDRGWHELNQCRIDAGITKPSGSQQGMLRLNVGGSHLNFRRCILAGRKEPSATWALGNLFESVWDDRLPRDSDGRIVLDESPACVKHLIHSLIESSGAAPGSLPRGDTLALDEMVYLPYVARALGLSAYIPRQGMEVVGGTTSLSHCEVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRV-----GASQSIVGGFSSVPWSPHAYGGDSIMSSLGAFIFMLKDSDMGGPNSFQPVKWGKRDNNGGCDVVVGASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGSTFPNLNGQTITEIEVFQV-YSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANSDAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASD------RELAHVRVDAADRPAFDSFVNMYFPGFENFITDMVVP 548
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 518 bits (1334), Expect = 4.440e-170 Identity = 286/581 (49.23%), Postives = 368/581 (63.34%), Query Frame = 3
Query: 300 MIRTQMNENSTFAATVGAYTKEMESSLGQRRKEMAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVSTLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTSTDSLGSKDVFAADEAPLLPYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWTP----SEQVLTPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGTGPAFGKPPNLRVRRDLNHRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHGTRMTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLIDCRPSVFAKILDVLRMRKRALWAGNDGQEAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVKP 2030
M R MNE+ TF+ATV AY+KEME++LGQRRK M+QAW+D+++GW EL Q + GIT P + EG+++LNVGGSH+ RR VL KE A LG +FE VWD RLPRDSDGRIVLD+SPACVK LIH L+E SG + SL + A DE LP+VARALGLS P GM V GG+T+L E+G LT LQGWCP ++L+YRASRD W+ + F+ CG+N+P + TL+RV + S+VGGFSSVPW+P + V++ S GAF+FMLKD + G ++F+PVKW + + + V + GP FG+ + + LQ SY++P+ AF L+G+ +TE EVF+V+ A+AGALMEER+AL QA+ +L+ A A +ALA +YGP VA G D VVELSV GTRMTT RSTL+AC ESALAA F+ +KWPAT+KDVD +G RLI+C P+VF K+LDVLRMRKRA WA +D + A V + A DRP+FD+FVNM+FPG ENFI D V P
Sbjct: 1 MSRCHMNEDDTFSATVTAYSKEMEAALGQRRKGMSQAWEDVERGWHELNQCRIDAGITKPFGSQEGMLRLNVGGSHLRFRRCVLDGKKEPSATWALGNLFESVWDDRLPRDSDGRIVLDKSPACVKDLIHSLIESSGAAPGSLPRGETLAPDEMAYLPHVARALGLSAYIPLQGMEVVGGTTILSHCEVGELTATLQGWCPGNPNTMQLLYRASRDDWSPYPFHASCGNNSPNTITLLRV-----GASASIVGGFSSVPWSPHAYGGDSVMS-SLGAFIFMLKDSDMGGPNSFQPVKWSKRDNNGGYDVVVGASRGPFFGRTDLVVNFTYVPVTLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQVNICN-------------------------------------------AIAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRESA------HVRVDAADRPAFDSFVNMFFPGFENFITDMVVP 526
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 511 bits (1315), Expect = 1.270e-166 Identity = 286/588 (48.64%), Postives = 378/588 (64.29%), Query Frame = 3
Query: 300 MIRTQMNENSTFAATVGAYTKEMESSLGQRRKEMAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGAN-KESRAVSTLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTSTDSLGSKDVFAADEAP-LLPYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWTPSEQ------VLTPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGTGPAFGKPPNLRVRRDLN-HRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHGTRMTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLIDCRPSVFAKILDVLRMRKRALWAGNDGQEAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVKPPA 2036
M+R Q NE TF+AT+ ++ ME++L QRR EM WD +D+GW L +RM E+GIT P + EG+V+LNVGG + RRSVL + K+ LG +FE WDKR+PRDSDG IVLDESP CVK L+H LL S +S ++G FA +E P LL Y A LGLSG +GM + GG+T+ EP+E LT ++Q WCP LEL+YRASRDGW F RC ++P + TL+RV + G DS++GGFSSVPW+P+ Q L SPGAF+F+LKD GSSTF P+KWG+K G A AV++ G GP FG+ +L+V + N + T+N++Y++P S F +L+GR + + E FRV P + P AK+ G+G T+T +D FG+ +A +LME M LQ A ++L A T CA ALA +YGP+VA+G+ + VVELSV GT MTT RSTL+ CP+SALAA FD KWPA +KD+D +G R+IDCRP+VF+K+LDVLR+ KRA WAG G+ + RV IK GDR +F+ FV+MYF GCE+FIM V P
Sbjct: 1 MLRCQSNEKKTFSATLAVSSRAMEAALSQRRLEMDHEWDSIDEGWQTLRERMTEVGITKPLESKEGIVKLNVGGLLLAFRRSVLDSEGKQQPPTWALGNLFEAEWDKRVPRDSDGHIVLDESPTCVKQLVHRLLTASSSSKATVGRAGDFARNEDPALLHYTAGVLGLSGCLAPVGMSIQGGTTIFEPHETSKLTAVVQDWCPGHPGGLELLYRASRDGWNGATFNARCKGDSPSTVTLLRVKGCETGGTDSIIGGFSSVPWSPAIQNYSYGYYLRGSPGAFVFILKDEG-KGSSTFPPMKWGVKNGLAAKAVNQ--GCGPCFGEC-DLKVNWNGNMSTVGTDNSTYDVPAGSHFLQLNGRHLLDIEAFRVC-SKPTHTLPLAKQEHRAGEG-------TNTPTAPVRTSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAG--GENLQGMKETRVTIKPGDRVAFEEFVDMYFKGCESFIMAHVCLPG 574
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 6.610e-131 Identity = 263/562 (46.80%), Postives = 336/562 (59.79%), Query Frame = 3
Query: 399 MAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLG-ANKESRAVSTLGRMFEG-VWDKRLPRDSDGRIVLDESPACVKHLI-HVLLERSGTSTDSLGSKDVFAADEAPLLPYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWT---PSEQVLTPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGT-GPAFGKPPNLRVRRDL-----NHRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRV-SFHTPAPSPPPAKRAKVTGKGFLDNARDTD-TAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHGTR----MTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLI-DCRPSVFAKILDVLRMRKRALWAGNDGQEAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVK 2027
M + WD LD GW LE +M E G++ S+ +V+LNVGG VN+ RSVL A + S + TLG +FEG VWDKRLPR DGRIVLDESP CV+ L+ +R G S F DE P + VA ALGL ++GM V GGST L +E LT + GWCP + LEL+YRASRDGW+ + RCGD++P + +L RV +QD + +DS+VGGFSSVPWT P + L +FLF+LKDG ++ S F+P WG++ + K + + G FG+ DL N L N Y +P F RL GR + + EVFRV P+ PP T G +D A + +A++ + D +FG ++AG+L +ER AL AQ +L QA+ A KALA +YGP+ AAG D +VELSV G+R MTT STLQACPESALAA FD KWP TEKD D G R++ DC PSVF+K+LDVLRM+KR WAG+DG+ V V IK DR F+ FVNMYFPGCE+FIMD VK
Sbjct: 1 MKKEWDKLDSGWEALESKMNETGMSMVSSIQPSIVRLNVGGLDVNIARSVLRKAGESSSSTWTLGDLFEGCVWDKRLPRCEDGRIVLDESPVCVEELLCDASSKRPGNSN--------FPDDEKPYIGGVASALGL-----DLGMTVPGGSTTLPHDEAERLTATILGWCPGRPEGLELLYRASRDGWSGDALHARCGDDSPSTISLFRVKTQDANTSDSIVGGFSSVPWTALPPENRGLD----SFLFILKDG-IEESHNFQPAIWGLRIRNPKPSGAYDMEKFGLIFGRGRIF----DLSVVWTNQTLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRVRQTMGTLPTTPP------TVTGLIDCAAYFEASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAGDDGKMGA---AVLVAIKDADRAPFEEFVNMYFPGCESFIMDSVK 531
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 401 bits (1030), Expect = 3.120e-125 Identity = 240/572 (41.96%), Postives = 316/572 (55.24%), Query Frame = 3
Query: 351 AYTKEMESSLGQRRKEMAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVSTLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLER----SGTSTDSLGSKDVFAADEAPLLPYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGD-NTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWTP-----SEQVLTPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGTGPAFGKPPNLRVR-RDLNHRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHGTRMTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLIDCRPSVFAKILDVLRMRKRALWA-GNDGQEAGESELV--RVEIKAGDRPSFDTFVNMYFPGCENFIMDCV 2024
A + E++L QRR+EM QAWDD DQGW EL+ M E G ++ + LG +FE WDKR+PRD+DGRIVLDESP CVKHLI LL R +GT+T G D+ D+ L + AR LGLSG +GM + GG+T +P+E LT ++Q WCP G DRCGD ++P + T +RV + D ++GGFSS+PW +PSPGAFLFMLKDG S ++ KWG+K G + +AV R G GP FG+ +L V ++T N +Y P S F L+G + + E FRV P P+ P + + +++ V T D D FG+ VA +LMEE LQ+A +L A CA A+A +YGP VA G +D VVEL+V GTRMTT RSTL+ CP+SALAA+F+ +WP EKD+D G R+IDC+PSVF+K+LDVLR+ KRA WA +G E V RV IKAGD +F+ FV+MYFP CE F+M+ V
Sbjct: 3 ASARATEAALSQRRREMDQAWDDTDQGWQELQAHMTE------------------------------GKGEQPSSTWALGDLFEAEWDKRVPRDADGRIVLDESPICVKHLIEALLLRPNAANGTAT---GEADMSRDDQPDLFHHTARVLGLSGQLAPVGMTIKGGTTTFDPHEASKLTAVVQRWCP---------------GNPGAACQDRCGDQSSPTTITFLRVKGRGAAATDCIIGGFSSIPWDDFMYDSDAGYYSPSPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYRGQGYGPCFGEGRDLHVVWNGTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRVG---PKPNTPTSSTKQEDHA--VEDKTGPGAPVKTAD---DVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKPRVTIKAGDCAAFEEFVDMYFPCCETFMMEHV 518
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 370 bits (949), Expect = 2.510e-113 Identity = 251/587 (42.76%), Postives = 324/587 (55.20%), Query Frame = 3
Query: 300 MIRTQMNENSTFAATVGAYTKEMESSLGQRRKEMAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVS-TLGRMFEG-VWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTSTDSLGSKDVFAADEAPLLPYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWTPSEQV--LTPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGTGPAFGKPPNLRVRRDLNHRLQTNNTS-YEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTGDFGE-DADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHGTR----MTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLI-DCRPSVFAKILDVLRMRKRALWAGNDGQEAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVK 2027
M R NE+ F + +E+E L R KE + WD LD GW LE +M E G++ S+ + +V+L+VGG VN+ SVL + + S TLG +F+G VWDKRLP DGRIVLDESP CV+ ++ G S+ GS ++ DE P + YVA ALGL G+ P GMV W RASRD W+ H F+ RCGD++P + +L V +Q + +DSVVG FS VPWT S + + PSPG+FLFMLKDG +GS +P KWG K G+ V + GP HR+ T + Y+IP + F GR V + EVFRV +T G +D A + + + E D +FG ++AG+L +ER AL AQ +L +A+ A +ALA +YGPN+AAG +D VVELSV G R MTT STLQACPESALAA FD KWP T+K+ D G R+I DC P VFAK+LDVLRM+KR WA +D + V V IKA DR F+ FVNMYFP CE+FIMD VK
Sbjct: 1 MFRHHPNEHECFLTATKTHAQELEELLEDRAKETKKEWDKLDSGWEALEFKMNETGMSTVSSFHPSIVRLDVGGLDVNIAWSVLREKVVASSSSWTLGDLFKGGVWDKRLPSPEDGRIVLDESPVCVEEILS-----DGASSKRSGSNNL-PDDEKPYIGYVASALGL-GLQP--GMV---------------------SW---------QADRASRDSWSDHAFHARCGDDSPSTISLFCVEAQGANNSDSVVGRFSVVPWTASPEFSPVLPSPGSFLFMLKDGN-EGSDAVQPSKWGPKVGYTGQVVDGRT-EGPVDWVM--------CLHRMFTVHCGIYDIPTEHPFLYHMGREVVDIEVFRVL------------PTSLTVTGLIDCAAYFKCSDMSAEEHENDVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWADDDKKVRA---AVLVAIKAADRAPFEKFVNMYFPACESFIMDSVK 523
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI) HSP 1 Score: 353 bits (907), Expect = 4.740e-105 Identity = 247/636 (38.84%), Postives = 333/636 (52.36%), Query Frame = 3
Query: 300 MIRTQMNENSTFAATVGAYTKEMESSLGQRRKEMAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVSTLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTST------------DSLGSKDVFAADEAPLLPYVARALGLSGI---CPEI-GMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWTPSEQVLTP----SPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAV----SRSSGTGPAFGKPPNLRVRRDLNHR-------LQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVS---------FHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAG--EDDAVVELSVHGTRMTTSRSTLQACPESALAAFFDANKWPAT-----EKDVDGEGWRL-------IDCRPSVFAKILDVLRMRKRALWAGNDGQ-----EAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVKP 2030
M+R + F T A K++ ++L M + W DL+ GW +Q + ++G+ P+ NEG+++LN+GG NV RS++ A E S LG +FE +WD+R+PRD DGRIVLDESPACVKH+IH LL R G +T + G AA E P L Y++ LGLS + CP GMVV GG+T P +L +++L+ WCP + L L+YRASRDG++T F +C + TLIRV S D DSVVGGFS + P E + S AFLF+L D G T + KW IK G A+ + GPAFG + + L T Y++ DS F LDG+ V E E+FRV A +PP + K FL R D A +FG ++A LMEE+MAL AQ +L++A A A+ALA +YGP VA+ E++AVVELSV G +TT RSTL+ACP+SA + + A P E + +G G R +DC PS F+KILDV+RMRKRA W +D Q EAG VR+ + DR F V+ FP CE+F+MD ++P
Sbjct: 1 MLRRHFKQRDAFRETASAQIKQLNAALDLAISAMDEPWRDLENGWERHQQYLVDVGVR-PTTGNEGVLRLNIGGVPANVHRSLI-AEAEGFKGSVLGALFEQMWDERVPRDMDGRIVLDESPACVKHIIHTLL-RGGCTTRTKETASLCHFRSAAGPSAAVAAHEEPYLLYISHVLGLSNVIPACPNTKGMVVAGGTTTANPLQLPQWSSLLRSWCPGDPAGLHLLYRASRDGFSTGPF-QQCVRGVCETITLIRVKSDD-GRPDSVVGGFSDIEIVPQEVGMETGNQRSSSAFLFLL-DSPGGGFPTAK--KWSIKEGEDSCAIHWPETADVCAGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDVAPVATTPPQSNIFPDKRKHFLHPDRSADEIEAAY-----ALQFGSSLAELLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAWVTDDQQGALIREAGGGHTVRIPVPESDRACFKNLVHTLFPECEDFVMDMIEP 623
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: D7FR77_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR77_ECTSI) HSP 1 Score: 301 bits (772), Expect = 1.150e-87 Identity = 212/567 (37.39%), Postives = 292/567 (51.50%), Query Frame = 3
Query: 399 MAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVSTLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTSTDSLGSKDVFAADEAPLLPYVARALGLSGIC--PEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRV--LSQDIDGNDSVVGGFSSVPWTPSEQVLTP---SPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHA---VSRSSGTGPAF--------GKPPNLRVRRDLN--HRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHG----TRMTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLIDCRPSVFAKILDVLRMRKRALWAGNDGQEAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVK 2027
M + W+++ +G +LEQ E G+ + ++ L LNVGGS+V++ R+ L L +F+ WD+RLPRD++G +VLDESP C KHL+ D+LG V DE LPYV+ ALG+ P + +G + + EL L + WCP +RL+L+YRASRDGW T F+ RCGD++P + TL R+ S N SV+G FSSVPWTP T SPG F+F+L DGS +FRP K + P +AK V G+ P+F GK + N +RL T++ ++ +P +F + DG V E EV+RV + R +D +FG ++A + EE AL +AQ L +A A ALA +YGP VA+ D VV+ SV G TR+TT RSTLQ CP L A D +KW KD G W + DC P+VF+K+LDVLRM+KRA W G + + V +KA DR +F+ V MYFPGCE I+D V+
Sbjct: 1 MKKEWEEVAEGRQKLEQLETESGMLRSTFEDDTLT-LNVGGSNVDISRADLQRLPALSEAWKLANLFDSDWDERLPRDANGLMVLDESPVCFKHLV-----------DALGG--VLPTDEQAYLPYVSNALGVPSPARVPRRRVDSEGSAMLGIGGELDRLARTVLDWCPGNPERLDLLYRASRDGWDTRHFHARCGDDSPMTVTLYRLNDASNRKGLNCSVLGCFSSVPWTPPSDGYTKLKSSPGGFVFIL----TDGSRSFRPTKLKVHPHYAKRGCGLVVLGEGSMPSFHVDLEVFHGKERHRSCTSGTNAKYRLWTDSGAFYVPEGCSFLKYDGIDVAEIEVYRV--------------------WSAEEERS-----------DDIHRFGGSIAASFEEEHKALHKAQSKLVEATEKGAASASALAAVYGPGVASNSRDPVVDFSVRGSRTTTRITTLRSTLQLCPY--LVARLDQSKW-TENKDKHGR-WLIKDCSPAVFSKVLDVLRMKKRAGWIGGEVK-------AHVVVKATDREAFEQAVGMYFPGCERVILDHVE 507
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: A0A6H5KTF6_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF6_9PHAE) HSP 1 Score: 288 bits (738), Expect = 5.020e-84 Identity = 196/495 (39.60%), Postives = 258/495 (52.12%), Query Frame = 3
Query: 306 RTQMNENSTFAATVGAYTKEMESSLGQRRKEMAQAWDDLDQGWIELEQRMKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVSTLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTSTDSLGSKDVFAADEAPLL----PYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDG-NDSVVGGFSSVPWTPSEQVLTPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGTGPAFGKPPNLRVRRDLNHRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAK---VTGKGFLDNARDTDTAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAGEDDAVVELSVHGTRMTTSRSTLQACPESALAAFFD 1766
R ++NE TF+ A EME++L Q R E+ AWD +D+ +LE RM E+ S T L +FE +WDKR+PRD++G IVLDESP CVKHL+ LL++SG + +L S F L P R+ LS +C PLT ILQGWCP RL L+YRASRDGW F++ CG ++P + TL RVLS D++VGGFS W+ S SP AF+ M+K G+ DGSS+F+P KW + G + + S GP FG + + D L ++ + DSAF L G+ V E EVFRV A SPPP RAK + G +D + T + +D G +A +LMEER AL++A +L Q + A E AL +YGP+VAAG++D VVELSV TR+TT RSTLQACP+SALAA FD
Sbjct: 4 RWRLNEKRTFSGAFDANVSEMEAALRQSRTELNAAWDGIDKHRGDLEARMVEVDGDGISPT------------------------------WNLCDLFESMWDKRIPRDANGLIVLDESPICVKHLLRALLKKSGAA--ALDSP--FGCSGQGWLRTRWPTSPRSWRLSEVC--------------------PLTDILQGWCPGNPSRLHLIYRASRDGWGGEAFHECCGKDSPVTITLFRVLSSAGTAVTDTIVGGFSRSSWSNSCPFSRFSPDAFICMVKYGSADGSSSFQPSKWIPRRGLPNYLGTSSH--GPCFGSDLCMSLHDDNARFLHVAIGAFNVSEDSAFFTLGGQTVKEIEVFRVCREATAGSPPPPPRAKPATTSENGLIDLTSGGPSDAATESYDDDVRMSGALIAESLMEERAALREAFAELAQPNTKAGESVNALTAVYGPDVAAGKEDTVVELSVRETRLTTLRSTLQACPDSALAARFD 442
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE) HSP 1 Score: 288 bits (737), Expect = 1.400e-83 Identity = 207/536 (38.62%), Postives = 277/536 (51.68%), Query Frame = 3
Query: 453 MKELGITAPSATNEGLVQLNVGGSHVNVRRSVLGANKESRAVS-TLGRMFEGVWDKRLPRDSDGRIVLDESPACVKHLIHVLLERSGTSTDSLGSKDVFAADEAPLLPYVARALGLSGICPEIGMVVDGGSTVLEPNELGPLTTILQGWCPFESKRLELVYRASRDGWTTHDFYDRCGDNTPWSFTLIRVLSQDIDGNDSVVGGFSSVPWTPSEQVL-TPSPGAFLFMLKDGAVDGSSTFRPVKWGIKPGHAKHAVSRSSGTGPAFGKPPNLRVRRDLNHRLQTNNTSYEIPNDSAFSRLDGRPVTEREVFRVSFHTPAPSPPPAKRAKVTGKGFLDNARDTDTAVTTGDFGEDADKFGEAVAGALMEERMALQQAQVDLQQADVTATECAKALAQLYGPNVAAG-EDDAVVELSVHGTRMTTSRSTLQACPESALAAFFDANKWPATEKDVDGEGWRLIDCRPSVFAKILDVLRMRKRALWA-GNDGQEAGESELVRVEIKAGDRPSFDTFVNMYFPGCENFIMDCVKPPAIYEA 2048
+ E+GIT PS + EG+V LNVGGS + RSVL E + ++ LG + E WDKR+PRDSDGRIVLDESP C + + D+ D+ LL Y AR LGL G M + GG +LEP+E LT I+QGWCP LEL+YRASRDGW+ F D+C D +P +S G +S F T S VL + +PG +G R V W + G A +QT N + ++ +S L+GR V + E FR+ + P + AK F+ + TA + FG +A ALMEE + LQ+A +L A+ T CA AL +YGP+VA G E++ VVELSV GTR+T STL+ CP S A F ++WPAT+KD+D G R+IDC PSVF+K++D+LR A WA G+D QEA ++ RV IK DR F+ FV++YF GCE+ IM+ V+ EA
Sbjct: 5 LTEVGITKPSRSKEGMVMLNVGGSRLTFHRSVLEGKGEQQGLTWALGTLCEAEWDKRVPRDSDGRIVLDESPTCPR------------VWGAREEHDLAPDDKPELLYYTARVLGLRGQSAPFDMPMRGGPNILEPHETKRLTAIVQGWCPGHPGGLELLYRASRDGWSARSFDDKCRDGSP------STISLPFSGFESRADLF-----TISTIVLFSAAPG-----------NGMCDLRVV-WKV---------------GAAS--------------TVQTKNLTQDVQAESRLLALNGRGVVDIETFRLCYCRPTDALSSAKPKH----HFIGDIA-VPTAPVRSRLLRMSFPFGRLIADALMEE-IVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILR----ASWARGDDDQEANKTP--RVTIKPCDRAEFEEFVDIYFKGCESLIMEYVESLGDEEA 464 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig167.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig167.23.1 >prot_P-littoralis_Contig167.23.1 ID=prot_P-littoralis_Contig167.23.1|Name=mRNA_P-littoralis_Contig167.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=586bp MIRTQMNENSTFAATVGAYTKEMESSLGQRRKEMAQAWDDLDQGWIELEQback to top mRNA from alignment at P-littoralis_Contig167:113541..120181- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig167.23.1 ID=mRNA_P-littoralis_Contig167.23.1|Name=mRNA_P-littoralis_Contig167.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6641bp|location=Sequence derived from alignment at P-littoralis_Contig167:113541..120181- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig167:113541..120181- >mRNA_P-littoralis_Contig167.23.1 ID=mRNA_P-littoralis_Contig167.23.1|Name=mRNA_P-littoralis_Contig167.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1758bp|location=Sequence derived from alignment at P-littoralis_Contig167:113541..120181- (Pylaiella littoralis U1_48)back to top |