mRNA_P-littoralis_Contig166.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: A0A6H5JSG7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG7_9PHAE) HSP 1 Score: 221 bits (562), Expect = 4.220e-68 Identity = 116/173 (67.05%), Postives = 129/173 (74.57%), Query Frame = 3
Query: 3 QDEPANQRTVFLEGACIPGDSAFAECACMRTPIGACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNFIFKHEGESPADYGADVDPDQTRNGTG-AHPAGVGPTSSERAREVAYLSQHFLQREWGVPGSRADRQRRADEMRMRRNNGT 518
Q +P + R +F GACI GDSAFAE MRTPIG RA+RFFNYKHSSMRFRVEHAFGRLK+KFR+L GLDC L HC +V+ACVIL+NFIF EGESPAD+G D P TRNGTG A G GP SERAREV YL ++FLQREWG GSR D+ R DE R RRNNGT
Sbjct: 161 QAQPVSSRQLFANGACILGDSAFAESPWMRTPIGKPDNRAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIVNACVILHNFIFMCEGESPADHGVDNAP--TRNGTGRALSQGAGPFDSERAREVDYLRRNFLQREWGAAGSRMDQARLQDERRARRNNGT 331
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: A0A6H5JA50_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA50_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 9.500e-13 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 3
Query: 3 QDEPANQRTVFLEGACIPGDSAFAECACMRTPIGACTTRAQRFFNYKHSSMRFRVEHAFG 182
Q +P ++R +F GACI GDSAFAE MRTP ++R QR+FN+ HSSMR RVEHA G
Sbjct: 188 QSKPVDERRIFANGACILGDSAFAEGPWMRTPYTMPSSREQRYFNFMHSSMRMRVEHALG 247
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: A0A3Q0RQD1_AMPCI (DDE Tnp4 domain-containing protein n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RQD1_AMPCI) HSP 1 Score: 60.1 bits (144), Expect = 4.380e-7 Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 3
Query: 114 TRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNFIFKHEGESPADYGADVDPDQTRNGTGAHPAGVGPTSSERAREVAYLSQHF 431
T QR+FN +HS R VE+AFGRLK ++R LGK LD + + ++ AC L+N H GE+ + G V P + R G A V PT R RE L+Q F
Sbjct: 292 TAEQRYFNERHSRTRMTVEYAFGRLKGRWRCLGKRLDVDVSAVTTVISACCTLHNVCEMH-GEAYEESGVPVPPVE-RWPEGGALADVQPT---RVREA--LTQFF 390
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: A0A672FS63_SALFA (DDE Tnp4 domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FS63_SALFA) HSP 1 Score: 59.3 bits (142), Expect = 6.750e-7 Identity = 42/104 (40.38%), Postives = 52/104 (50.00%), Query Frame = 3
Query: 114 TRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNFIFKHEGESPADYGADVDPDQTRNGTGAHPAGVGPTSSERAREVAYLSQ 425
T QR FN +HS R VE AFGRLK ++R LGK LD + ++ AC L+N H GE+ + G V P R GA A V PT A + SQ
Sbjct: 224 TAEQRCFNERHSRARMTVECAFGRLKGRWRCLGKRLDVDISTVPTIISACCTLHNVCEMH-GEAHQESGGAV-PHTERCAEGAASADVQPTRVREALTQLFNSQ 325
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: UPI0019648D8D (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like n=1 Tax=Perca fluviatilis TaxID=8168 RepID=UPI0019648D8D) HSP 1 Score: 58.5 bits (140), Expect = 1.270e-6 Identity = 49/141 (34.75%), Postives = 67/141 (47.52%), Query Frame = 3
Query: 27 TVFLEGACIP----GDSAFAECACM---RTPIGACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNFIFKHEGESPADYGADVDPDQTRNGTGAHPAGVGPTSSERAREVAYLSQH 428
TV + G +P GD A+ + + T G T + QR+FN +HS R VE AFGRLK ++R LGK LD + ++ AC L+N KH GE+ + G + D R G PT A + SQH
Sbjct: 195 TVEINGVQVPIMLLGDPAYPMRSWLIKGYTDTGNLTVQ-QRYFNKRHSRARVTVECAFGRLKGRWRCLGKRLDVDISTVPTIISACCTLHNVCEKH-GEAYEEPGQAILQDN-RIADGEAQDAAEPTRVREALAEFFYSQH 332
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: UPI000A2A68D6 (putative nuclease HARBI1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A68D6) HSP 1 Score: 57.4 bits (137), Expect = 1.750e-6 Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 3
Query: 36 LEGACIP----GDSAFAECACMRTPIG--ACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNF 281
+ G +P GDSA+ + P TR + FN+ S R VE+AFGRLK +FR LGK LD L++C ++ AC IL+NF
Sbjct: 97 ISGQAVPPLIIGDSAYGLQDWLMRPFKDHGLLTREETKFNHVLSVTRMVVENAFGRLKGRFRCLGKRLDLCLENCVLVTSACCILHNF 184
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: UPI0014259451 (protein ALP1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259451) HSP 1 Score: 56.6 bits (135), Expect = 3.250e-6 Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 3
Query: 27 TVFLEGACIP----GDSAFAECACMRTPIG-ACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNF 281
T +EG +P GDSA+A + P T AQ+ FN + S R VEH+FGRLK ++RS+ K D + ++V +C++L+NF
Sbjct: 92 TKTIEGKEVPIVILGDSAYALSTFLMKPYAEGLATAAQKRFNERLSRTRILVEHSFGRLKGRWRSIMKRNDSQADKIHIVVASCIVLHNF 181
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: UPI00106EB0D0 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like n=1 Tax=Perca flavescens TaxID=8167 RepID=UPI00106EB0D0) HSP 1 Score: 57.0 bits (136), Expect = 4.260e-6 Identity = 52/144 (36.11%), Postives = 71/144 (49.31%), Query Frame = 3
Query: 27 TVFLEGACIP----GDSAFAECACM---RTPIGACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNFIFKHEGESPADYGADVDPDQTRNGTGAHPAGVGPTSSERAREVAYLSQHFLQ 437
TV + G +P GD A+ + + T G T + QR+FN +HS R VE AFGRLK ++R LGK LD + ++ AC L+N KH GE+ + G + D R G PT R RE L++ FLQ
Sbjct: 189 TVEINGVQVPIMLLGDPAYPMRSWLIKGYTDTGNLTVQ-QRYFNERHSRARVTVECAFGRLKGRWRCLGKRLDVDIATVPTIISACCTLHNVCEKH-GEAYEEPGQAILQDN-RIADGEAQDAAEPT---RVREA--LAEFFLQ 324
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: A0A2A4IXI2_HELVI (DDE Tnp4 domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4IXI2_HELVI) HSP 1 Score: 56.2 bits (134), Expect = 4.270e-6 Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 3
Query: 24 RTVFLE---GACIPGDSAFAECACMRTPIGACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYN 278
RT +++ + GDS + + TPI TT A+R +N H R VE FGR KR+F L KGL +L S ++ AC +L+N
Sbjct: 90 RTKYIQRQHSGYLIGDSGYPCLRFLLTPISTPTTNAERIYNKVHVKTRNVVERTFGRWKRRFPCLSKGLGNKLVTVSNIIVACAVLFN 177
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Match: A0A6S7GL22_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GL22_PARCT) HSP 1 Score: 57.0 bits (136), Expect = 4.940e-6 Identity = 38/119 (31.93%), Postives = 57/119 (47.90%), Query Frame = 3
Query: 96 PIGACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKHCSVMVDACVILYNFIFKHEGESPADYGADVDPDQTRNGTGAHPAGVGPTSSERAREVAYLSQHFLQREWGV 452
P T+A+++FN MRF VEHAFGRLK ++R L K D +++ AC +L+N E E D+ + D D G + E +V + + LQR+WG+
Sbjct: 308 PDDGMLTQAEKYFNRCLCKMRFVVEHAFGRLKGRWRCLLKRNDTTMQYIIQQTAACCVLHNLCEMQEEEFEEDWRVEPDVD-----------GHNINNPEGDEDVRDVLKGMLQRQWGL 415 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig166.9.1 >prot_P-littoralis_Contig166.9.1 ID=prot_P-littoralis_Contig166.9.1|Name=mRNA_P-littoralis_Contig166.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=145bp MRTPIGACTTRAQRFFNYKHSSMRFRVEHAFGRLKRKFRSLGKGLDCRLKback to top mRNA from alignment at P-littoralis_Contig166:65962..66610- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig166.9.1 ID=mRNA_P-littoralis_Contig166.9.1|Name=mRNA_P-littoralis_Contig166.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=649bp|location=Sequence derived from alignment at P-littoralis_Contig166:65962..66610- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig166:65962..66610- >mRNA_P-littoralis_Contig166.9.1 ID=mRNA_P-littoralis_Contig166.9.1|Name=mRNA_P-littoralis_Contig166.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=435bp|location=Sequence derived from alignment at P-littoralis_Contig166:65962..66610- (Pylaiella littoralis U1_48)back to top |