mRNA_P-littoralis_Contig166.79.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: D8LSJ5_ECTSI (Erf4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ5_ECTSI) HSP 1 Score: 216 bits (550), Expect = 8.590e-63 Identity = 103/139 (74.10%), Postives = 113/139 (81.29%), Query Frame = 3
Query: 102 MATFDGEGAVGFGVIRLEPTGIKLGATGISSSYDDGYPQELEGWISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLLSMRSQAKEIERGVGEVVSSVNRNLEARKIEVRFDFRRRWCRAWVQVDYGPAV 518
MA A GVIRLEP GIKLGATGISS+YDD YP EL+GW++ EEW ECIGRIN ALMDRFPCGLCRLQAYC CPCTLGLSLLSMR +AKEIERGVGEVV +VN+NLEAR+ VRF F R +C AWVQV+YG V
Sbjct: 1 MAAIQEHEAGVLGVIRLEPIGIKLGATGISSAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGSKV 139
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: A0A225VIN1_9STRA (Golgin subfamily A protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VIN1_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.820e-17 Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 3
Query: 99 GMATFDGEGAVGFGVIRLEPTGIKLGATGISSSYDDGYPQELEGWISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLLSMRSQAKEIERGVGEVVSSVNRNLEARKIEVRFDFRRRWCRAWVQVDY 506
G T +GE +G +RL PT ++ TG++ +Y+D +P EL + + ++ I +INN + D +PC LC L Y CCPCTLGLSL ++ E+ V +++ +N+ + + V + R ++W+Q+ Y
Sbjct: 17 GSVTTEGEQE--YGEVRLYPTRMRF-VTGVARAYEDDFPFELSHLVKETDFEIAINQINNTMQDYWPCFLCILCGYGCCPCTLGLSLFCPNFCIRDAEQYVRALLTRINKRVCFERAGVEWQLERSCGKSWIQIAY 149
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: K3WTZ5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTZ5_GLOUD) HSP 1 Score: 73.6 bits (179), Expect = 1.860e-11 Identity = 43/137 (31.39%), Postives = 70/137 (51.09%), Query Frame = 3
Query: 141 VIRLEPTGIKLGATGISSSYDDGYPQELEGWISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLLSMRSQAKEIERGVGEVVSSVNRNLEARKIEVRFDFRRRWC--RAWVQVDYGPAVSLASPSTSA 545
V LEPTG ++ G++S YDD +P ++ +E+ + +IN AL+D +PC C AY CC CTLGLS +Q E E + +N + V + R W ++ +++ PA + AS ++S+
Sbjct: 15 VAVLEPTG-EVFVNGLASWYDDEFPAAAAALMTPDEFARAMAKINEALLDHWPCMPCSAFAYGCCVCTLGLSFYCATTQVDEAEARARLQIRRINDQANFKATGVEWRLVRTWYTRKSCIEIT-APATAAASSNSSS 149
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: A0A2D4C7W6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7W6_PYTIN) HSP 1 Score: 77.0 bits (188), Expect = 3.680e-11 Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 3
Query: 141 VIRLEPTGIKLGATGISSSYDD---GYPQELEGWISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLLSMRSQAKEIERGVGEVVSSVN--RNLEARKIEVRFDFRRRWCRAWVQVDYGPAVSLASPST 539
+ L PTG ++ G++SSYDD + ELE +++++E+ + +IN+AL+D +PC C AY CC CTLGLSL +Q +E E + +N +N +R+IE R R W + ++ A P+T
Sbjct: 23 LATLAPTG-EIFVNGLASSYDDDWASHASELERFLTRDEFERAVAKINDALLDHWPCLPCTSFAYGCCVCTLGLSLYCASAQVREAEERTQLQLRRLNAQQNFASREIEWRLV--RAWYKRQSFIEISVAEGAPEPTT 157
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: A0A2D4C036_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C036_PYTIN) HSP 1 Score: 72.4 bits (176), Expect = 4.870e-11 Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 3
Query: 141 VIRLEPTGIKLGATGISSSYDDGYPQE---LEGWISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLLSMRSQAKEIERGVGEVVSSVN--RNLEARKIEVR 458
+ L PTG ++ G++SSYDD + LE +++++E+ + +IN+AL+D +PC C AY CC CTLGLSL +Q +E E + +N +N +R+IE R
Sbjct: 23 LATLAPTG-EIFVNGLASSYDDDWASHASXLERFLTRDEFERAVAKINDALLDHWPCLPCTSFAYGCCVCTLGLSLYCASAQVREAEERTQLQLRRLNAQQNFASREIEWR 132
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: F0WFT4_9STRA (Uncharacterized protein AlNc14C85G5469 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WFT4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.690e-9 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 3
Query: 150 LEPTGIKLGATGISSSYDDGYP---QELEGWISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLLSMRSQAKEIERGVGEVVSSVN--RNLEARKIE 452
L PTG GI+SSYDD YP E ++ ++++ I ++N+ALMD +PC C AY CC CT G+S+ Q +E + V +S +N + + R+IE
Sbjct: 8 LNPTGATF-VNGIASSYDDQYPGDQSEFADYVKRKDFDVAITKLNDALMDHWPCIPCTSFAYMCCLCTGGISVYCAIRQVQEAKYRVNLQMSRINELKVFKGRRIE 112
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: A0A7S3MIS9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MIS9_9SPIT) HSP 1 Score: 55.8 bits (133), Expect = 4.460e-6 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 3
Query: 141 VIRLEPTGIKLGATGISSSYDDGYPQE-LEGWISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLL 362
V+ + P K G++ +Y +GY E L G+I + E+ + + RIN+ L++ FPC L Y CC TLGLSLL
Sbjct: 18 VVVVRPAS-KTWVNGLAQTYSEGYDSERLAGFIEQREYEQIMERINDMLINYFPCPLSWYCGYLCCLFTLGLSLL 91
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Match: J9IG55_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IG55_9SPIT) HSP 1 Score: 57.4 bits (137), Expect = 9.150e-6 Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 3
Query: 141 VIRLEPTGIKLGATGISSSYD-DGYPQELEGW-ISKEEWLECIGRINNALMDRFPCGLCRLQAYCCCPCTLGLSLL 362
V + P G K TG++SSYD D + + + G IS+ E+ + + ++N +++ +PC C+L Y CPCTLGLS +
Sbjct: 16 VFIIRPRG-KTFITGLASSYDEDSFDEGILGKNISQREFKKIVEKLNETIIENWPCSTCQLIGYMFCPCTLGLSFI 90 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.79.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig166.79.2 >prot_P-littoralis_Contig166.79.2 ID=prot_P-littoralis_Contig166.79.2|Name=mRNA_P-littoralis_Contig166.79.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp MATFDGEGAVGFGVIRLEPTGIKLGATGISSSYDDGYPQELEGWISKEEWback to top mRNA from alignment at P-littoralis_Contig166:345970..352900- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig166.79.2 ID=mRNA_P-littoralis_Contig166.79.2|Name=mRNA_P-littoralis_Contig166.79.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6931bp|location=Sequence derived from alignment at P-littoralis_Contig166:345970..352900- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig166:345970..352900- >mRNA_P-littoralis_Contig166.79.2 ID=mRNA_P-littoralis_Contig166.79.2|Name=mRNA_P-littoralis_Contig166.79.2|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig166:345970..352900- (Pylaiella littoralis U1_48)back to top |