mRNA_P-littoralis_Contig166.76.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig166.76.1
Unique NamemRNA_P-littoralis_Contig166.76.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 5.160e-108
Identity = 329/569 (57.82%), Postives = 363/569 (63.80%), Query Frame = 3 
Query:  819 QHPLLDDFGP----LGGGASDNPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKAAAAAAASAPSTVHSPLSRHPANATSADHLSSXXXXXXXXXXXXXXXXXGGPGVGAVNGRERARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPPFGTTHTGVGKPKGXXXXXXXARTAIETGIAPAPTRRSGGMETKPTGLWLEPAAATQSGYDQHSTASASVAQKGRGPPPNPPAFVGAAVGIDVGFGAAIPSRVH-LNEAVGVDMATAAPFRRIGRPRELAAGAAGEGFPQQASVGGGSGGGGRRGIRSTGPWEPRRATVLDQATA-DNWLPHTGPGLATTAAVATVGAAAAGAGGATKLAPQIEAAAA--AGPVSPSR-YPRASGQNGS---------ARAAKPMDAATVGGLHRLCAALRNVEAMDSL 2471
            Q  L    GP      GG  DNPRLKRNKPVKWSAEEDRRLR+AVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEED+LII LQ EVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKAAAAAA+ A  T H  L R      S D LS XXXXXXXXXXXX        G GAV+GRE+  GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXX R A++T  A +     GGM    + L L  + A        + A A  A++ R     P AF  A+        A  PS  + +N+A     AT A   RI RP  +  GA  +   +QA  G   GGG   G   +G     +  V  +A++ D+  P TG GLA          + +G      + P ++ AAA      SPSR YP ASG             A     M+ A  GGLHRLCAAL NVEAMD++
Sbjct:   71 QQQLFRQLGPSIEAAAGGGLDNPRLKRNKPVKWSAEEDRRLRDAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKAAAAAASPAAPTGHRLLPRPAGAGASNDPLSXXXXXXXXXXXXX--------GRGAVDGREKVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXRAALDTPAAASGVAGPGGMSMSFSNLPLSSSLADIKPNLTPAEAGAIHAEQARRSLSYPSAFAAASA-------ATSPSPGYPINDASAGAAATCASLGRIDRPPGVGVGAGFQQESEQAVAGSCCGGGREGGEGKSGRQHWSQKGVGGEASSFDDRAPLTGSGLAAXXXXXXXXVSGSG------MVPAVKGAAAPEGARTSPSRRYPFASGDGSGXXXXXEERPAGNGGKMEGAGDGGLHRLCAALANVEAMDNM 617
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 229 bits (584), Expect = 6.760e-63
Identity = 109/155 (70.32%), Postives = 129/155 (83.23%), Query Frame = 3 
Query:  894 PVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDA 1358
            P KW+  ED  LR AV ++ E+ WKDIA  V TRNHVQCLQRWKKVLKPGLVKGQWSA ED +LV LV KGF+NWGQ+A+ M GRTSKQCRERW HHLDP+V+KG YTTEED+ I+ LQ E+GN+W++IAK L GRTENAVKIRWKAL+R +++A
Sbjct:   27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNA 181
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.590e-56
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 3 
Query:  864 SDNPRLKRNK----PVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNR 1343
            S++PR++       P +WS EED RLR AV R+    WK+IA+ V+TRNHVQCLQRWKKVL PGLVKGQW+ EED  LV +V +G +NWG +++ + GRTSKQCRERWCHHLDP + KGG+T EED +I+ LQ+++GN+WA IA+ L GRTENA KIRWK L R
Sbjct:   54 SESPRIEDQDQGPHPRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILER 217
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 4.410e-55
Identity = 100/155 (64.52%), Postives = 122/155 (78.71%), Query Frame = 3 
Query:  879 LKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNR 1343
            L+R  P +WS EED RLR AV R+    WK+IA+ V+TRNHVQCLQRWKKVL PGLVKGQW+ EED  LV +V +G +NWG +++ + GRTSKQCRERWCHHLDP + KGG+T  ED +IILLQ+++GN+WA IA+ L GRTENA KIRWK L R
Sbjct:   12 LRRPHPRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRWKILER 166
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.410e-54
Identity = 96/168 (57.14%), Postives = 117/168 (69.64%), Query Frame = 3 
Query:  843 GPLGGGASDNPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRR 1346
            G +  G     +    +P +W   ED++L  AV    E  WK IA  V +RNHVQCLQRWKKVL+PGLVKGQW AEED  L+ L    F+NWG ++  M GRTSKQCRERWCHHLDP++ KG YT EED++II  Q E+GNRW+ IA RL GRTEN++KIR KAL R+
Sbjct:   89 GGVHSGGDPTRKKASTRPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRK 256
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 2.350e-52
Identity = 101/169 (59.76%), Postives = 122/169 (72.19%), Query Frame = 3 
Query:  855 GGASDNPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDAR 1361
            GG   NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L  LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED LI+ +Q ++GNRW+ IA++L+GRTE+AVKIRWK+L R +R +R
Sbjct:  102 GGDKSNPR-------RWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSR 263
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.800e-52
Identity = 102/166 (61.45%), Postives = 120/166 (72.29%), Query Frame = 3 
Query:  855 GGASDNPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 1352
            GG   NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L  LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED LII +Q ++GNRW+ IA++LTGRTE+AVKIRWK+L R +R
Sbjct:   91 GGDKSNPR-------RWSKAEDESLRLAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTKR 249
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: A0A024GD30_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD30_9STRA)

HSP 1 Score: 204 bits (519), Expect = 8.410e-52
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 3 
Query:  858 GASDNPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 1352
            G   N   +++ P +W+ +ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L GLV  G RNWG VAS + GRTSKQCRERWC+HLDP + KG Y+ EED +I+ +Q  +GNRW+ IA+ L GRTE+AVKIRWK+L R  R
Sbjct:  102 GTKTNLAKEKSNPRRWTKQEDEALRLAVERSGERNWKTIADQVPGRNHTQCLQRWTKVLKPGLIKGHWTIEEDAKLKGLVANGIRNWGHVASMIPGRTSKQCRERWCNHLDPNINKGSYSEEEDRIILEMQARLGNRWSVIAQHLKGRTEDAVKIRWKSLKRGHR 266
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: A0A1V9ZGQ2_9STRA (Myb-like DNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGQ2_9STRA)

HSP 1 Score: 204 bits (518), Expect = 9.730e-52
Identity = 101/166 (60.84%), Postives = 120/166 (72.29%), Query Frame = 3 
Query:  855 GGASDNPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 1352
            GG   NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ +ED +L  LV +G +NWGQVA+ + GRTSKQCRERWC+HLDP + KG YT EEDDLII +Q ++GNRW+ IA+RL GRTE+AVKIRWK+L R +R
Sbjct:   81 GGEKSNPR-------RWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPDEDAKLKTLVAEGRKNWGQVAAQIAGRTSKQCRERWCNHLDPNINKGNYTKEEDDLIIDMQAKLGNRWSVIAQRLVGRTEDAVKIRWKSLMRSRR 239
[Close]
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Match: W4GZ24_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZ24_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.190e-51
Identity = 102/176 (57.95%), Postives = 124/176 (70.45%), Query Frame = 3 
Query:  843 GPLGGGASDNPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKA 1370
            G   GG   NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L  LV +G +NWGQVA  + GRTSKQCRERWC+HLDP + KG YT EED +I+ +Q ++GNRW+ IA++LTGRTE+AVKIRWK+L R +R +R+ A
Sbjct:   99 GSARGGDKSNPR-------RWSKAEDESLRVAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVAGQIPGRTSKQCRERWCNHLDPNINKGNYTREEDQVIVDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTRRSSRDNA 267
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSJ8_ECTSI5.160e-10857.82Myb-like DNA-binding protein, putative n=2 Tax=Ect... [more]
A0A7S2UU49_9STRA6.760e-6370.32Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6H5K458_9PHAE1.590e-5660.98MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FQG8_ECTSI4.410e-5564.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LM16_ECTSI4.410e-5457.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A418B0H6_9STRA2.350e-5259.76Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0XBC5_9STRA5.800e-5261.45Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024GD30_9STRA8.410e-5258.18Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A1V9ZGQ2_9STRA9.730e-5260.84Myb-like DNA-binding protein n=1 Tax=Thraustotheca... [more]
W4GZ24_9STRA1.190e-5157.95Uncharacterized protein n=12 Tax=Aphanomyces astac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:335227..345981 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSJ8
PFAMsMyb_DNA-binding
Model size5384
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue4.76e-115
EggNOG OGsCOG5147@1|root,KOG0048@2759|Eukaryota
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-09_001910.1
DescriptionRNA polymerase II transcription regulator recruiting activity
Cds size2400
COG categoryADK
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.76.1prot_P-littoralis_Contig166.76.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig166 335876..343093 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789803.5215242-UTR-P-littoralis_Contig166:335226..3354321680789803.5215242-UTR-P-littoralis_Contig166:335226..335432Pylaiella littoralis U1_48UTRP-littoralis_Contig166 335227..335432 +
1680789803.5341775-UTR-P-littoralis_Contig166:335791..3358751680789803.5341775-UTR-P-littoralis_Contig166:335791..335875Pylaiella littoralis U1_48UTRP-littoralis_Contig166 335792..335875 +
1680789803.6053588-UTR-P-littoralis_Contig166:343093..3453571680789803.6053588-UTR-P-littoralis_Contig166:343093..345357Pylaiella littoralis U1_48UTRP-littoralis_Contig166 343094..345357 +
1680789803.6142237-UTR-P-littoralis_Contig166:345551..3459811680789803.6142237-UTR-P-littoralis_Contig166:345551..345981Pylaiella littoralis U1_48UTRP-littoralis_Contig166 345552..345981 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789803.544583-CDS-P-littoralis_Contig166:335875..3365321680789803.544583-CDS-P-littoralis_Contig166:335875..336532Pylaiella littoralis U1_48CDSP-littoralis_Contig166 335876..336532 +
1680789803.5560734-CDS-P-littoralis_Contig166:340323..3404041680789803.5560734-CDS-P-littoralis_Contig166:340323..340404Pylaiella littoralis U1_48CDSP-littoralis_Contig166 340324..340404 +
1680789803.5679402-CDS-P-littoralis_Contig166:340786..3408821680789803.5679402-CDS-P-littoralis_Contig166:340786..340882Pylaiella littoralis U1_48CDSP-littoralis_Contig166 340787..340882 +
1680789803.5779364-CDS-P-littoralis_Contig166:341177..3413031680789803.5779364-CDS-P-littoralis_Contig166:341177..341303Pylaiella littoralis U1_48CDSP-littoralis_Contig166 341178..341303 +
1680789803.5881002-CDS-P-littoralis_Contig166:341653..3430931680789803.5881002-CDS-P-littoralis_Contig166:341653..343093Pylaiella littoralis U1_48CDSP-littoralis_Contig166 341654..343093 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig166.76.1

>prot_P-littoralis_Contig166.76.1 ID=prot_P-littoralis_Contig166.76.1|Name=mRNA_P-littoralis_Contig166.76.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=800bp
MSLASSGGILRSVHLSGASPATALLWSRRDEPSCARNEGATSCAAADRDD
ESRSSGNSSMCVRAGAAAMAAAAAPTPSSKKRPSFKTEHHQQHHHHQQAT
LYHQQQHRAGNTEQPQVGNGHSGERDSKFRRVSTACAVEERQQQQQQHPQ
WTLQQQQPQHHQHYQQQHQQYQQQQHQHPLLDDFGPLGGGASDNPRLKRN
KPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKP
GLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLD
PAVRKGGYTTEEDDLIILLQREVGNRWADIAKRLTGRTENAVKIRWKALN
RRQRDARNKAAAAAAASAPSTVHSPLSRHPANATSADHLSSSSSLSSSSS
SSSSSSDTGGPGVGAVNGRERARGGGGAVVDAPPQRQPRTSSASSSSSSS
SSSSSSSSSSFPPFGTTHTGVGKPKGGGGGGGGARTAIETGIAPAPTRRS
GGMETKPTGLWLEPAAATQSGYDQHSTASASVAQKGRGPPPNPPAFVGAA
VGIDVGFGAAIPSRVHLNEAVGVDMATAAPFRRIGRPRELAAGAAGEGFP
QQASVGGGSGGGGRRGIRSTGPWEPRRATVLDQATADNWLPHTGPGLATT
AAVATVGAAAAGAGGATKLAPQIEAAAAAGPVSPSRYPRASGQNGSARAA
KPMDAATVGGLHRLCAALRNVEAMDSLEMLPRVDAKMTKTAAPLKRSSSK
LGELRRAGGNAHPRAKRDSDRQAPPPPPPTRSLRNPDDARAGTTVAEDK*
back to top

mRNA from alignment at P-littoralis_Contig166:335227..345981+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig166.76.1 ID=mRNA_P-littoralis_Contig166.76.1|Name=mRNA_P-littoralis_Contig166.76.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10755bp|location=Sequence derived from alignment at P-littoralis_Contig166:335227..345981+ (Pylaiella littoralis U1_48)
CGGGATTTGTTACACCCCACGCTGCCTCTTTTTGCCACGTGAGCAGTCTT
TTTGTGCTCTCGTACCGCTCTATCTCTGCTCAAATGGTTCCCTCCCAAAC
TCAATTTCTCTTCTCCGCTCACTCTCCACGCGTACAGCGAGGGCAGGACT
CGGAGGACACCCGAGGCAACGGATAGGCCTTGACGTAAAGGAGCACATGG
GCGTAGGTGAGAGATCTTGAGCGCTCTCCAGGCATGGTAGAAACGCTCGA
AGATAAAGAAGTAGCCTAAAGATGAGGGCGCGCCTCTCTCCGAACTGCAC
CCACCGACGACGTGGCAGAGATATATGCAGCAAACTCCATCCGATCCTGT
GCCCGGTGGAGGGCACGATGCCGGCCAGCCCACCGCACACAACCTGTGCA
CCCACTCAGATGACTTCCTCTCTCTTCCTGGGTCGATCTCGTGGTCCAGG
ATGCGGAAGTGAGAAACTTCACCGGGCTCTCAGTATTTCTCTGATTTTTA
ACCTTGCTTCCCTTCACCTGCAATCTCTTTTTCCGTCCACACGCACTTCT
TTCTGTCACACCCAGCAGGTAAACCAAAATCTTACACTGACACCGGCACC
TCTCGCGGTTGCGGGGGCGTGTCACAGCAGTGTAGGTCGGCCGCGTGACA
TGAGTCTGGCAAGCAGCGGGGGGATCCTTCGCTCTGTTCATCTCAGTGGG
GCTTCACCGGCGACAGCGCTGCTGTGGAGCAGGAGGGACGAGCCTTCCTG
CGCTCGTAACGAAGGAGCTACCTCGTGTGCTGCTGCTGACCGTGACGACG
AATCGCGATCCTCTGGAAATTCCAGTATGTGCGTTAGAGCCGGCGCGGCC
GCCATGGCCGCTGCAGCCGCCCCGACTCCTTCGTCAAAGAAACGTCCAAG
CTTCAAAACGGAGCACCACCAGCAGCACCACCACCATCAGCAAGCGACTC
TGTATCACCAACAACAGCATCGCGCTGGAAACACAGAGCAGCCGCAGGTT
GGCAATGGCCACAGCGGTGAGCGAGACTCAAAATTCAGGAGAGTCAGCAC
CGCGTGCGCGGTCGAGGAACGTCAACAGCAGCAGCAGCAGCACCCGCAGT
GGACTCTTCAGCAACAACAGCCGCAACACCACCAGCATTATCAGCAGCAG
CACCAGCAGTATCAACAGCAGCAGCACCAGCACCCGCTGCTCGACGATTT
TGGCCCGCTAGGTGGAGGCGCGTCGGATAATCCGAGACTGAAGCGCAACA
AGCCTGTGAAGTGGAGCGCCGAGGAAGACCGCAGGCTTCGCGAGGCTGTC
GTCAGGGTGAGAACCACACTCTCTTCCAGTTCTTAACTTTCCGGATTCGG
AAATCCTCTTGGTTTCGAAAACTATTGAATTTATTTCGTCGTATCAACAC
GAAGTACGAAATATTGAAATATTATATCCGTATCATATACTTCGAAGTAT
GTGTGCAGAGAGAAACAAGGCTGGATCGATCAATGGGGTTCACCCCCCCC
TCATTGATTTTGAGGCCGTTTAGGTTCTGCTGTTCTGGTCTAGCACTGCC
CTTCGTGTACGCGAGTCCATTTAAAATTTTATGATTTGCCTCGTGTGAAA
ACAGATGAAACATGCTGACTGCTCCTGTACATGCCAGGAAAACGAATTAC
CTTGACGAAGTACTGAGTATTAGTTTCGATCCATAAAATGGTTGGTAGTT
GTGAAGATATTAATGAAAGAAGGAGATACAGAGTTGCAAGTACAAAAGTA
CGTGTCGACGCGGTGGTTGGTGCGCACTTTTTTTTTGCTCACCACGCTTC
CACTCCTGCACTTTGTACTTGTATGTATGAGCAACTACTAGTCTTGGGTG
GTACGAAGGAGCCCCCCCCGGGATCGCGATTAAGGGGGCTCCTTCCTAAC
TGCATTAAGCAAGCTGCGCTGCTGCCGAAAGCCTGCTTTCGATTTTGTTT
CCTCTGCTTTCCAACCCCCCCCTCAGACAACATCAGTCATCAAAAACAAC
ATGGTGTGGGCCCCTGTTTTTTTTTTTTTTTTTTTTTTTGGGCGAGACAT
GTCGTTTGCAGCAACCGTACAGCAGCGATTTCTCGGCGTAGACGACAGCC
GTGCCTCTACCAAGCTGGTCCGACACGGACAGTGCCATGTAGATGTGGAA
AAGTCTGCTGTATCGTGCTGCTGATGGCCGTGGGTGTGCGTTCCGCTGGG
TGCGTGCTACTGCTGAGGGCGTGTTATCCAACGTCTCGTAGAAACTAGAT
TTACAGCAGTAGCGACAAACATCGTAGAGCAGCGATTTCTCGGCGTAGAC
GACAGCTGTGCCTCTACCGAGCTGGTCCGACTCGGACAGTGCCACGTAGA
GGTGGATAAGTCTGCTGTATGGTGCTGCTGATGGCCGTGGGTGTGTGTGC
GTTCTGGTTGTGGAATGGCACTGCTGGGGAGGTGGTATCTGGCGTACGCA
CAGCAGAAAATAGCACGGTTGTGGGCAGCTCGGCGGCCACCGCGGTCGAT
TTGCGCAAGGACGCAGGCACCAGTGAGGAATTACTATTTTTCTCGTGCGT
TCAAGCCCGGGGTCGCTCCGATCCGTGAAGAATTGGCCGCGTAAGCAACG
AAAAAGTGGCCTATTTAGGGCACAGACAGACAAACAGACAAACAGACAGA
CACCAAAAACATCGATTTGGTAAATTTGGGTCGCTAGGCATGTTTTTTTC
CCAATCTTTCCCACCGTCTCCCTCGCACACACACACACACACACACACAC
ACACACACACATCACGACCCACTATATTTAGGAGCCTTTGGCCCCGACTT
TCTTACAGAAAGCACGGTGCCCGGCGACTTCGTCGCCGGTGGGCTCCTTC
CTAAAAGTACGAACGTGTACGAGCGTAGATGTGACAAGTCGGATGATATC
ACGGCAGTACATACATCAGACAAATATGACGTGAAACTTTTAGAGCTGCT
CGTACTTTCCCGGCTGATTCCGGCTGATCTCACACATGCACCAAAAGCCG
AAAGGTGTAGACTGGCGTACTGGCGTACTGCATTCGATAGATGGCATGAC
CTGCGCAACCACACGTACACAAGCTTCCAATTCCCCCCCCCCCCACCATC
ACACGGATATTATACAAACTACCAGTCGCCCCCGGTTCAGTGGGTTGACC
TTCAAAACCTTCTGACAGGCATTATGTGTAAATGTGTGTTTGTGTGTGTT
GTCATCCCTTTAATTGGGCGCCACTCTGCATCTTTCGGGTAGGTAGACGC
TTCAACCGGGGTCACCCAGGGGGAAGTCAACACAGGAGTTTTTTTTTTTT
TTCTCCACTTCCCTCTGCGGTGCTTGCCTTGTTTGGTCGAGCTTTTATCG
CGAGAAAGGGGACAGCAATCCCTTTCCCTCGTCGATGGTACGATCGAATT
TTGTTTACTCACGATTTGATCGTTTTCCACTTTCACGCGCAATGTGAGAA
AAAAACCCAGATCATGTGCTCTCAGTAATAATGTGTTCCTATGTGTGCTT
TGTTCTGGGCGTTGTTCCCGTCTTACCTTTTCAGTACTTTCTCTTACAGT
TATACACGGAGTACTTCATACAAAAGAACTGGTCGCCCCGGTGGTTCAGT
TGGTAACCTTCGTAACCTACTGACATTCACCCCCGAGTTCGAATTCCAGT
GCAGTAGCACGATCTGGGTTTTCGTCTCACAATGCGCGTGAAAGTGGAAA
GCGAATAATTCGTGAGTTAACAAAATCGGTATTGTAGTGCCTCAGACAGG
AAACATGAAACGACGCCCTCGGGACTGTTCACCCCGGGTCTTTTCGCCCC
GGGCCTTTCTTCGGTCCGGGCCTTTTTTTCTTTCTGCCCCGAGCCTGTTT
TTCTTCAGAAAGATCGCCCCTTTTTTTTCAAGACTTGGTAACGGTACATT
ATTTGATGAGAAATGGAAACACTGGTAAATGTACCTTATTCTTTGTGTTG
GCTGCAATATCTTCTCCAGACCCTTCTCTGGTGAGAGGCAAAACACATTT
GATGTGTTTGTAAGTTTTTAAGAAAAACATGTACAATTGTTCGCTTCTCT
CCAGACGAGGGTCTGGAGTAGACATTGCAAGATCGCCGCTCTACCTTTCA
AACACGTCTTGCATATCGCTTCTGATGAGTTGTATTATAGAAACGTATGA
TATCATATGATAGCGACACAGGTAAATACATATTTGTGTGTTCGTTGCGA
ATCTCATCCACCCTAGATCGATGTCTAGGGAGAGGCGAGCACATTAATGT
CTTGGAAATAACATGCCGTCGTATAATATTATACATATCATATATACATA
TTCCCTCTTTTTGATGTTATATGATTACCGGTAGCTGCGTTGTACTTCGA
AGATTGTGTTTCAATTTACTTTTTTGGAAGTTGTCATGCCAAGGCAAAGA
GAGGACGTCGCTTCCACCTGCAACGTCTCACCGGCTACAGCGGTCGTGGC
AGCAAATACCTCCTCAGGAGCTGCTTCGCGCTCTCCCTTTGAGTGCCGCA
CTGCATCGTGGCATCATGATATTTTACACGAAGCTCATTTTCATCTAAAG
ACACGAATTCGCACATTTGGTCATGTGTATGATACATGGGTGAGTGGGAT
GGACGAAAAGGGACGAGAATCCACAAAATCTCGGTAAAATCTGAATTAAT
ACGATCGTGTCGTAGTGAGACGTGGGGCGGGAATAGTAATTCTACAGCAG
TCGGACATGGGATGGGAAGTGATGAAAATACAGTGAAAAAACCGTGGGAC
GGAAGAAAATAGTCCCGGAGTCGGCCACGGGATGGGAAGCGAGTCGGCAG
ATAGTGACATTTGAGGAGAGTGGGGCGGGAGCAGCAGCTGATGTCACGAC
GGTATGGGAGATCTGGGAACATAAATCGCCGGCGAGGAAGGTCGCGAAAA
GTCGTGTTGCAATTAAATATCGCGCGGTTTCCCGTTCCCGGAATTGTCCC
AACCACTCTTTTCCAACCCAGACCTAAACCGTGCGGAATGAGACCTGACC
AATTCCCTCCTCCCCCCCACACACCCCGGTGCCGGAAACGCTCGTGTTGC
TGTATCGCAATCGTTTATTTCCTGGTGTTTGTGAACATCGTGAGCAGTTT
TCGGAGGCGCGGTGGAAGGACATCGCCAGTCTGGTGGAGACGCGGAACCA
CGTGCAATGTCTGCAGAGGTGGAAGAAGGTGGGTCGAGGGCTGTGTGGGC
TGTGTGGGCGGTGTGTTGCCGATAGGATAGTGCCGTGTACCAGCCCTCTC
GCCCCTCGGCACGAGCACTCGTGTTGATCGCATCGTGCGTCACATTTTTT
GCACGCCGGCAGTACATACGGCCGTCGAAGATCATGACCAACCGTGGCGG
CGGTCATGACCAACCGTGGCGGCGTACACAGCCTCCGAAAACCTTGCGCG
CACACAGCAGCATTGTCGTGATTTCTGAGGTAAACCGCAACCTCACTCCC
CTGCCCGGAAATAATTGCACACACCGCACCAGACAGATCAGCTGGTTTTC
CGTTTTCCTGTTCATTCACGGTGCGTTATGATTTTTGTCGCCTGTGTCGG
TGGCGGGCAGGTGCTGAAACCAGGGCTCGTGAAGGGGCAATGGAGCGCCG
AAGAGGATGACCGGCTCGTCGGCCTGGTGGAGAAGGGCTTCCGTAACTGG
GGGCAGGTGAGGACAAGCACGATCGCGTACGCAACGGTGGCAAACTTGTT
GCTTTTGAAGTTTATTTAAGGCTCCTTTCATTTTGTTTTGCTGTCCCTTC
CAGTTCACACACGCGCAGACGTGCACATGCTGCTTTTATGGTACGGCGAC
GGGGCGGTTTTCGGTCGCAGCCGGCATGTTTGATCAGAAACTCAAACTTG
AACCACACTAACGCGCTCTCGGCGTGCACCAGGATCACGCCTCTTGCTCT
CCGTCGACCCTGTTTCGCTGAAACTGAAACTCTGTTTTGTTGAATTCGAA
GGTGGCATCGTTCATGGACGGAAGGACTTCGAAGCAGTGCCGTGAGCGGT
GGTGCCACCACCTCGACCCCGCTGTTCGCAAAGGCGGTTACACCACTGAG
GAAGATGACCTCATCATCTTGTTGCAGGCAAGCGGGGGGGGCACCGTCAG
GGGCGGGGGATCGTCATTTATCAGGCCGATTTAGCACTAAGTAGCATCGT
TGATGGAAAATCATGCATGCACAAGGGTCGATTGCTCTCTGAACATATGA
TTTTGACAGCGTACACAAGACACACCTTGGCACCTTACAAGTGTGCATAC
TCGTCTAAATCCATTTATCCCGCAGCTGCCTCGCGCAGGAGTGATGCCGA
CACTGCTGTCTAAAAGCCTGGAGCACGCACGCATGTAAATCGCACGCAAT
ATTATGACGATGTTTGGTTCCGCTTCGCCCCCCCCCCTCCACCCCCTGCC
GTGACTGCATGCATTCTCGATGTACAGCGAGAGGTTGGCAACCGGTGGGC
GGACATCGCGAAACGTCTGACTGGCAGAACGGAGAACGCGGTGAAGATCC
GCTGGAAGGCGCTGAACCGGCGCCAGCGGGACGCGCGAAACAAGGCGGCA
GCGGCGGCAGCGGCGTCCGCTCCCTCCACCGTCCACTCACCGCTGTCGAG
ACATCCCGCCAACGCCACCTCTGCTGACCATTTGTCGTCGTCGTCGTCGC
TATCATCGTCGTCGTCGTCATCTTCATCGTCGTCGGACACCGGTGGCCCC
GGCGTTGGTGCCGTGAACGGCCGAGAACGGGCGAGGGGGGGAGGAGGGGC
TGTGGTCGATGCGCCACCGCAACGACAACCCCGAACCTCGTCGGCGTCTT
CTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCTTCCTCTTCCTCCTCGTTT
CCGCCCTTTGGAACCACCCACACGGGGGTAGGGAAGCCGAAGGGCGGCGG
CGGCGGCGGTGGCGGGGCCCGCACTGCGATCGAGACTGGGATCGCGCCGG
CACCAACGCGCCGGTCAGGAGGGATGGAAACGAAGCCGACAGGGTTATGG
TTGGAGCCGGCGGCGGCGACGCAGAGCGGTTATGACCAACACTCGACGGC
GTCGGCGAGTGTTGCTCAAAAGGGACGCGGGCCTCCCCCGAACCCCCCTG
CTTTCGTCGGTGCTGCTGTTGGTATTGACGTTGGTTTTGGTGCTGCCATA
CCAAGTAGAGTTCATCTAAACGAAGCCGTCGGTGTGGACATGGCTACGGC
TGCCCCGTTCAGAAGAATAGGGCGGCCAAGAGAGCTTGCGGCTGGTGCCG
CGGGCGAGGGTTTCCCACAACAGGCAAGTGTTGGCGGCGGCAGTGGCGGC
GGTGGCCGAAGGGGAATAAGAAGCACTGGCCCGTGGGAGCCAAGACGTGC
TACTGTTTTAGACCAGGCCACGGCCGACAACTGGCTCCCCCACACCGGGC
CCGGCCTGGCCACCACAGCTGCCGTTGCTACCGTTGGTGCTGCAGCCGCG
GGTGCCGGCGGCGCCACCAAGTTGGCCCCGCAAATCGAGGCGGCTGCGGC
AGCCGGGCCTGTCTCCCCGTCCCGGTATCCCCGCGCCTCCGGCCAGAACG
GGTCAGCTCGCGCGGCGAAACCGATGGATGCCGCGACCGTTGGAGGCCTG
CACCGCCTTTGCGCGGCTCTGCGCAACGTGGAGGCAATGGACAGCCTGGA
GATGTTGCCGCGTGTCGACGCCAAGATGACGAAGACCGCCGCCCCGCTGA
AACGCTCTTCCTCCAAGCTAGGCGAGCTCAGGAGGGCGGGCGGTAACGCT
CACCCGCGAGCTAAACGCGATAGCGATCGCCAGGCGCCGCCTCCGCCGCC
GCCGACCCGTTCGCTGCGCAATCCAGATGATGCGCGTGCTGGCACGACGG
TAGCGGAGGATAAATAGCCGAGATAGTCCCGGTAGGGCCGCGGCCAGCAT
CTCTTGCAGACAGCAGCAGCAGCAGCAGCAGGCCATCTTGAGGGCAGGCG
GTGGTTAGATATGTGGGTCGATGATGTATTGAACGCCTGCCAGCATCGGC
TACAATGTTCAAAACGCGCAAGGGGGGCGTGAGGGGGTTACATATATGTT
GTCAAGCGTGCACCGAATGAGAGTGCACGGCTGACACAGTCAGTTAGAGA
CGCAGTTTGCTGCGACCACCTTCACTGACCCTGATCTCCCGGAAAAGAAA
GAAAGGAGGGGTTGTTCGTGAAGGTTAACAACGGTTGGCAAGTTCTCCAA
ATTAAAACAACGGTTGGTATGTTCTTCGGATTTCTACGATGCATGCGATC
TTGAGGTATAACGCCAAAGAGGTTTATGGCTGGGCGCGTGCGAATGTGGA
CGCTGCGCAGTTAGTTGGTTTGGGGGGGGGGTTGGTCGTGTTGTTTTTTT
GCTTTCCAGCTATGGGTAAACTAGGGTTGGAAACACAGCAGCAGTTTGGA
CGGGAGGCACAAACCATGTTGGTGAAACCCCTTCAAGACTTCATTCAGTG
TCGATCAGAGCTCGGTGAAAATGTCGACCTGGTGAGTTACGTAAGGTGGT
TGGCTGCACCCAGAGCGTTCGCTCGCAGCTAACGGCTCTAAAAGTACTGT
GGTGACAGCCAGGGGAAAACTGACCAGACCAGCTGCGTGAGGGCACAGCT
CTTTTGGGGCTCGACAACGCGCATTTTCCCCTGAAGAGATGGTCCCTTTG
GTAGACAGCAGAGGAGACGAGATCAGAGACCCAGCCGGACGCATGTGTCT
CCTGTAAGCACTGGTTTTGGTGTTTGTATGATAAAACTCTGCCGATCGTG
GTCGCCTCTTCTTTATCTTTATGTCGTTCCCTTTGATTTTTTTTTTTTGT
GGGCTTTCATCCGCATCATATCATACATCCCCAGACACTCGAGAGGGTCA
CCCTCGGTTGCAGCACTGATGCATTTTGTAGTGGGGAACCATTCGGTGCC
AAAAGAAAGATCGGGAGCAGGGGGGGGAGGGGGGGGGTTAAGAGCACAAG
ACAGCGATTTGCGCCTCCCCCAGAGCGTGAAGCGCAACGTGGCGGGTGTC
CTGCGGGCGTGCAGATTTTTTCTATGAGATCTGGAAATGCGTGTCGAGGC
AGGTGTGTGACAGTAGAGTGGGCGTCGTCTCTCTCGTTACCTGACGACAA
CATTCGTGGATCGTTTGTGGAGTGGCAGGTGAGGCATGAGACGTGGGCGC
GGGGAACGGGGGGAGGCGTGTCTCCCCTTGTTTTCGCGCGCACGCGTGTG
TGTGTTTTGTTTTTTTACGTGAGGGTGTTTTGTGTTTTTTTGTTTTTCCC
CGTATGAACGAGATGCATGTTCTTGTTTTTATCCCCCCGAGTATTTTTGT
TTTGTGTTGTTTTGTTGCTTTTGGGAGAGAAAAAGTACAGGCTTATAGCG
TCGGATTGATAACGGTTGCGCTGCAGCTGGTCGGCAGGTTCGTGTGGACT
TTTTTCATTCAAGTACGAAGTACTTGACGTTTATTACCGTGCTGCTGTGG
GGTTGGAACGCGGTTATGCTGTTCTGCGAGACACGTGGAAGGCGGTGTGA
CTGACGGAAGTCTGAGAGTCACGTCGGGCGGTGGTTGTCTACACATGTTC
CTTGCTGCCGTTTGTGTGTCGATCCGGTCCTGTCTGGGGTTTTCGGCCGA
TTTAATCGGCGTATCGCTGGCTGTTGTGTCGAAGTGATGGAGATGGTTAT
TTTCGGACAACGTAACATTCTGCAGGGAAACTACAGGGTAGCAAGCGCTT
TGGAACGGTTCGAAGCATCGGCCTAGAAATATAGCAGCAACCATGCGGTA
TGCTTGGCAGTAAGTCCGTGTGTTCTTTACAAGCGGCACCAAGGTGACCA
TCAGGAAACTGCTGGCAGTTCATGTCTTGTTGGTGTTACTATTTCTTGTT
TTGTTTTCATGTAATGTATTTCTGTTAATGCAGCGCGTTGCGTCCTCTGG
TCTCAGGCAGCAAAGCACGGTACATGTACATGTTAGCCCGTCATAGACCG
AAGATGACTCGGTTGGCGCAAGGGTGGGCGGGGGGCCGGGGGGGGGGTAT
GAGTAAAGTCGCAACGTCTTGACGGTACCAAAGGTAGCGGGTGCGCCGCA
CTAAGTTGCGCGCGTTTACGATCGAGAGGGAAACAACAAATGGCGAGACA
CGAAGTGTCAAATAATCGGATGCCTTAGCGGGTGCAGGAGCAGCGAGGGC
TTTCGGGGGGGGGGGGGGGGATGAAATATAGGAGACGCACACAGCTCCCA
TCACGCGATTTCACGAGGGTTGCAGTTAGATTCCTCTTCGCCTCTGGTGA
TAGCAGCACTCGATATGATGGGTATGATGGGATAGTAGCGAGTTTATTTG
TGTGGTGTCGGGAATGATGTTCGCTGTGCTGATGTCCCATTTCGGGCGGG
AGTCTGGGAACCGAAGTTGTCCTACCGCTGACGCGGAGTTTGAGGCATAT
CCGTTATTTGCTCGTTGACAGCTCAGCACTCAAATGCCGCTCGGGATTTC
TCGGGGAGTTCATTAACCTTGGTCGTCCATAATCATTTAATGTATAGCGC
GGAGCGCGGGAAGGTGGTGACTTGTTCGAACGATTACGATCTCGAAGGAG
AGGCATTTGGTCGGTGACTGCTTGCGTTAAACCCAGCGCCCAAGCAGCAC
GTGCACGGCACCGCGCGTGGCTTGGTGGGGTGGTGGGTGGCTTGCTGCCC
GCCGGTGCTTGCCGGTTTTTGTCGGGGAGGGGACGGGGCAGTGTTTTTCA
CGGAGCTTCTCCCGCTCTTGTGATGACACGGCTGCCTGTCTTCTGGCGTC
TTCAC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig166:335227..345981+

>mRNA_P-littoralis_Contig166.76.1 ID=mRNA_P-littoralis_Contig166.76.1|Name=mRNA_P-littoralis_Contig166.76.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2400bp|location=Sequence derived from alignment at P-littoralis_Contig166:335227..345981+ (Pylaiella littoralis U1_48)
ATGAGTCTGGCAAGCAGCGGGGGGATCCTTCGCTCTGTTCATCTCAGTGG
GGCTTCACCGGCGACAGCGCTGCTGTGGAGCAGGAGGGACGAGCCTTCCT
GCGCTCGTAACGAAGGAGCTACCTCGTGTGCTGCTGCTGACCGTGACGAC
GAATCGCGATCCTCTGGAAATTCCAGTATGTGCGTTAGAGCCGGCGCGGC
CGCCATGGCCGCTGCAGCCGCCCCGACTCCTTCGTCAAAGAAACGTCCAA
GCTTCAAAACGGAGCACCACCAGCAGCACCACCACCATCAGCAAGCGACT
CTGTATCACCAACAACAGCATCGCGCTGGAAACACAGAGCAGCCGCAGGT
TGGCAATGGCCACAGCGGTGAGCGAGACTCAAAATTCAGGAGAGTCAGCA
CCGCGTGCGCGGTCGAGGAACGTCAACAGCAGCAGCAGCAGCACCCGCAG
TGGACTCTTCAGCAACAACAGCCGCAACACCACCAGCATTATCAGCAGCA
GCACCAGCAGTATCAACAGCAGCAGCACCAGCACCCGCTGCTCGACGATT
TTGGCCCGCTAGGTGGAGGCGCGTCGGATAATCCGAGACTGAAGCGCAAC
AAGCCTGTGAAGTGGAGCGCCGAGGAAGACCGCAGGCTTCGCGAGGCTGT
CGTCAGGTTTTCGGAGGCGCGGTGGAAGGACATCGCCAGTCTGGTGGAGA
CGCGGAACCACGTGCAATGTCTGCAGAGGTGGAAGAAGGTGCTGAAACCA
GGGCTCGTGAAGGGGCAATGGAGCGCCGAAGAGGATGACCGGCTCGTCGG
CCTGGTGGAGAAGGGCTTCCGTAACTGGGGGCAGGTGGCATCGTTCATGG
ACGGAAGGACTTCGAAGCAGTGCCGTGAGCGGTGGTGCCACCACCTCGAC
CCCGCTGTTCGCAAAGGCGGTTACACCACTGAGGAAGATGACCTCATCAT
CTTGTTGCAGCGAGAGGTTGGCAACCGGTGGGCGGACATCGCGAAACGTC
TGACTGGCAGAACGGAGAACGCGGTGAAGATCCGCTGGAAGGCGCTGAAC
CGGCGCCAGCGGGACGCGCGAAACAAGGCGGCAGCGGCGGCAGCGGCGTC
CGCTCCCTCCACCGTCCACTCACCGCTGTCGAGACATCCCGCCAACGCCA
CCTCTGCTGACCATTTGTCGTCGTCGTCGTCGCTATCATCGTCGTCGTCG
TCATCTTCATCGTCGTCGGACACCGGTGGCCCCGGCGTTGGTGCCGTGAA
CGGCCGAGAACGGGCGAGGGGGGGAGGAGGGGCTGTGGTCGATGCGCCAC
CGCAACGACAACCCCGAACCTCGTCGGCGTCTTCTTCCTCCTCTTCCTCC
TCTTCCTCCTCTTCTTCCTCTTCCTCCTCGTTTCCGCCCTTTGGAACCAC
CCACACGGGGGTAGGGAAGCCGAAGGGCGGCGGCGGCGGCGGTGGCGGGG
CCCGCACTGCGATCGAGACTGGGATCGCGCCGGCACCAACGCGCCGGTCA
GGAGGGATGGAAACGAAGCCGACAGGGTTATGGTTGGAGCCGGCGGCGGC
GACGCAGAGCGGTTATGACCAACACTCGACGGCGTCGGCGAGTGTTGCTC
AAAAGGGACGCGGGCCTCCCCCGAACCCCCCTGCTTTCGTCGGTGCTGCT
GTTGGTATTGACGTTGGTTTTGGTGCTGCCATACCAAGTAGAGTTCATCT
AAACGAAGCCGTCGGTGTGGACATGGCTACGGCTGCCCCGTTCAGAAGAA
TAGGGCGGCCAAGAGAGCTTGCGGCTGGTGCCGCGGGCGAGGGTTTCCCA
CAACAGGCAAGTGTTGGCGGCGGCAGTGGCGGCGGTGGCCGAAGGGGAAT
AAGAAGCACTGGCCCGTGGGAGCCAAGACGTGCTACTGTTTTAGACCAGG
CCACGGCCGACAACTGGCTCCCCCACACCGGGCCCGGCCTGGCCACCACA
GCTGCCGTTGCTACCGTTGGTGCTGCAGCCGCGGGTGCCGGCGGCGCCAC
CAAGTTGGCCCCGCAAATCGAGGCGGCTGCGGCAGCCGGGCCTGTCTCCC
CGTCCCGGTATCCCCGCGCCTCCGGCCAGAACGGGTCAGCTCGCGCGGCG
AAACCGATGGATGCCGCGACCGTTGGAGGCCTGCACCGCCTTTGCGCGGC
TCTGCGCAACGTGGAGGCAATGGACAGCCTGGAGATGTTGCCGCGTGTCG
ACGCCAAGATGACGAAGACCGCCGCCCCGCTGAAACGCTCTTCCTCCAAG
CTAGGCGAGCTCAGGAGGGCGGGCGGTAACGCTCACCCGCGAGCTAAACG
CGATAGCGATCGCCAGGCGCCGCCTCCGCCGCCGCCGACCCGTTCGCTGC
GCAATCCAGATGATGCGCGTGCTGGCACGACGGTAGCGGAGGATAAATAG
back to top