mRNA_P-littoralis_Contig165.99.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig165.99.2
Unique NamemRNA_P-littoralis_Contig165.99.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: D7G592_ECTSI (Peroxisomal membrane protein PEX14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G592_ECTSI)

HSP 1 Score: 581 bits (1498), Expect = 1.180e-190
Identity = 432/795 (54.34%), Postives = 490/795 (61.64%), Query Frame = 1
Query:   76 MREDQIENGVNFLVHPKAKTAPLSQRISFLENKGLTSEEISAALSRVESGTDTHLSATAGGDKGISPSGVLSSTSSAFPTEASIPLWRQVAVPGALAVGAVGALGAYYATSQSAARGGPTSSGDSSH----AAAGRIPYSAGGVGAATTSAEAAGYPGGGLSEPRGMEATGEDGDFGEGARAQDRLARSQRLESGVTHSPFDGVTGGDGSFPGTGASEGAPVAAGEPSSSFLAGEFRRLSESMEQQTGQLVEAVGAMKALASRAEQDSSSLLAARVSTHTSELRAELGTIKQLLLLQPRGEESGGGTATGAQTGSAVVKAASVAGGSGAGSAGAITYPKTAFDEAKADSSGT--SGVKSGGAEGVKGAMDQQANCLEAKSGLLTEDREKEEARXXXXXXXXXXXXXXXXXXXXXXXSEHRKDTARAALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSSNNKAVLEDVVKAIDAVARPNGPPLSSAPPTAPVTVASTPAFASLTPPAKVTPL-------------SAKQPIDNTGSAADAVVSEASGVVRRSR----FVPAAAAGAAAGNSAVEGSDVNTSSAXXXXXXXAVQPSGARGDVLAAAAEVNGVGEDAGETXXXXXXXXXXXXXSAAVVAAA-EPQAVGSVGTEQRDRREEDV-AAEQGAPPATMAEVAATIQRGDEPPGIQVVEDRLSANAPSLEVSSRSSPPKPWEVLGLRRSAD-EGVGGGTTAGATVGER 2382
            MREDQI NGVNFLVHPKAKTAPLSQRISFLENKGLT+EEISAALSR E G D++ SATAGG+              AFP EASIPLWRQVAVPG LA+GAVGALG YYA S+S   GG             AAAGRIP SAG   A T       Y G G SEPRG +A  E+  + E A  Q RL RS+ LE G+   PFDG             SE AP     P  S LAGEFRRL+E+MEQQTG LVEAV AMKALASRAEQDSSSLLAARV +HTSELRAELGTIKQLLLLQ   E  G GT +        ++A S  G + AG A        +   A    +G    G  S  AEG+KG  D+QAN      GL   D E++ A+  XXXXXXXXXXXX         +E RK TARAALA ++ADN++QAAKDG+AMLRML+ NL+N PNVPRYRRI TSNDNFKKRLLPLEGHRAMMEAVGFK KG++WEWTWHE+S PS SSNNKAVLED+VKAIDAVARPNGPPLS+A                                       S +   D+ G      VSEA+G  R S        + A GAA    AV+GSD   SS        A+   G R DVLAAAA+VNGVG DAG               +  V AAA E +  G+VGT++ D   E V A E+GAPPA++AEVAA IQRGDEPPGI+VVEDRLS +APS  VSSR SPPKPWEVL     A+ +G+ G    G   G R
Sbjct:    1 MREDQIVNGVNFLVHPKAKTAPLSQRISFLENKGLTAEEISAALSRAEGGEDSNGSATAGGNSXXXXXXXXXXXXXAFPAEASIPLWRQVAVPGVLAMGAVGALGTYYAASRS--EGGXXXXXXXXXXXXXAAAGRIPNSAGATEATT-------YGGVGRSEPRGADAAAENSAYAERAYEQGRLTRSETLEDGMAFLPFDG-------------SEQAPPGT-SPGESPLAGEFRRLTETMEQQTGHLVEAVEAMKALASRAEQDSSSLLAARVGSHTSELRAELGTIKQLLLLQAGVEGGGAGTKS--------MRAISSVGAADAGEASRKATTDQSDMSAGVIGAGXXXEGAGSRSAEGLKGGADEQANGASVSGGLPVRDPEEDMAQEAXXXXXXXXXXXXA--------TEGRKATARAALAALVADNSAQAAKDGMAMLRMLVANLVNQPNVPRYRRIATSNDNFKKRLLPLEGHRAMMEAVGFKPKGSLWEWTWHEDSTPSASSNNKAVLEDIVKAIDAVARPNGPPLSTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAGWSTRSSGDHGGGGT--AVSEANGGARGSSRPSLVSDSGAVGAAGDGDAVKGSDGRPSSRGGGGSAPAL---GTRNDVLAAAAQVNGVGGDAGGASSRIAQGDEAPSAAEPVAAAAAESRGKGTVGTKENDLVVEAVEATERGAPPASIAEVAAAIQRGDEPPGIRVVEDRLSDSAPSFAVSSRPSPPKPWEVLSSPEDANGDGIEGRVGTGGAHGYR 751          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A836C861_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C861_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.000e-27
Identity = 205/666 (30.78%), Postives = 279/666 (41.89%), Query Frame = 1
Query:   76 MREDQIENGVNFLVHPKAKTAPLSQRISFLENKGLTSEEISAALSRVESG-----TDTHLSATAGGDKGISPSGVLSSTSSAFPTEASIPLWRQVAVPGALAVGAVGALGAYYATSQSAARGGPTSS------GDSSHAAAGRIPYSAGGVGAATTSAEAAGYPGGGLSEPR--------GMEATGEDGDFGEGARAQDRLARSQRLESGVTHSPFDGVT------GGDGSF----------------PGTGASEGAPVAAGEPSSSF-LAGEFRRLSESMEQQTGQLVEAVGAMKALASRAEQD-----------------------------------------------------SSSLLAARVSTHTSELRAELGTIKQLLLLQPRGEESGGGTATGAQTGSAVVKAASVAGGSGAGSAGAITYPKTAFDEAKADSSGTSGVKSGGAEGVKGAMD---------------------------QQANCLEAKSGLLTEDREKEEARXXXXXXXXXXXXXXXXXXXXXXXSEHRKDTARAALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFK-TKGNVWEWTWH-------------EESGPSVSSNN-KAVLEDVVKAIDAVARPNGP 1662
            +RE Q+E+GV FL HP+ + +PLSQRISFLE KGLT EEIS A++R   G      D HL+A+  GD                    S PLWR++ +PGAL    +G +GA  A     A     +S      GD++ A        A  +     S      PGGG++  R        G +A G DGD      A  R A +   E  V+ +     T        D +                 PG  A+  A  AA   S++  LA EF +LS +M+ Q+  L EAV  MKALA++ E+D                                                     + +LL A+V+  T+ELRAEL TIKQLLL+        G +A  A   SA +  A+ A  +G  +A  +        E +  S G + V   GA+    A+                             QA                    XXXXXXXXXXXXXXXXX         +   ARAAL  + A++++   K G+ ML+M I NLI HP VPRYRR++ SN N+   + PLEGH A++EAVGFK   G   EW WH              E G  V +   +AVL++ V  ++ + +   P
Sbjct:    2 VRESQVESGVKFLSHPQVRASPLSQRISFLEKKGLTPEEISEAMTRSGVGGFSAADDPHLTASPTGDSD------------------SDPLWRKLLLPGALLAAGLGVVGATRAREGGGAHPPAPASPRRLENGDAAAAXXXXXXXXAHEL----ESPSMGRSPGGGVASRRRGGRPPRPGADAAG-DGD------AAARAAHAPLAEPDVSVTAIGSTTLLTRQCSADATTRAAPAATVVSRIHPCRPGADAAGDADDAADGASATLRLAEEFGKLSGAMQAQSAALGEAVENMKALAAQREKDDKASSESQSESWLLLFLQDCTAVSXXXXXXXXXXXXXXXXXXXXXXXXCALLTAQALLTAQVNAQTAELRAELATIKQLLLMHT------GASALAAGNSSAAIGGAAPATDAGDAAAAGV--------EVEVVSDGDAAVNGAGADQQARAIHIFTDXXXXXXXXXXXXXXXXXXXXXXVAQAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARIEQDRAQKLAAARAALRDLHANSSAAQLKSGVPMLKMFISNLIQHPTVPRYRRLSLSNQNYTTLVAPLEGHTALLEAVGFKRASGTQMEWGWHGSGAQHGXXXXXAAEDGKGVDAETVQAVLKEAVAGLERLMKGEDP 624          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A5D6Y310_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y310_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 8.350e-13
Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 1
Query: 1315 RKDTARAALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHE-ESGPSVSSNNKAVLEDVVKAIDAVARPN 1656
            R D   A L ++   N+ +  K    +L M + NL+ +P+VPRYRRI   N NFK+++ PL+ H  +++A+GF+T G   EW WH  +       +N A+L  V+KA+ ++  P+
Sbjct:  287 RADKVEATLKLIRTQNSLEQLKLAAGILTMYVKNLVENPDVPRYRRIAPGNANFKQKVEPLKHHEDLLKAIGFETNGLNMEWKWHTADRANGEFDDNLALLRAVLKALQSLTSPS 401          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A662X5Z0_9STRA (PUB domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5Z0_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.880e-13
Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARPN 1656
            AL  +  +N+ +  K    +L M + NL+ +P VPRYRRI T N NFK+++ PL+ +  +++++GF+T G   EW WH  S  + +   N A+L  ++KA+ +++ PN
Sbjct:   11 ALKKLRTENSLEQLKLAAGILSMYVKNLVENPEVPRYRRIATGNANFKQKIEPLKHYEELLKSIGFETAGLNMEWKWHTASRTTGAFDENLAILRALLKALQSLSSPN 118          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: T0PZR0_SAPDV (Peroxisomal membrane protein PEX14 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PZR0_SAPDV)

HSP 1 Score: 82.8 bits (203), Expect = 1.040e-12
Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSSNNKAVLEDVVKAIDAVARPNGPPLSSA 1677
            AL +V  DN + A K    +L M   NL+  P+VPRYRRI T N NFK+++ PL+ H A++ ++GF+  G   EW WHE+  PS    +  +L+  V A ++    NG  LS A
Sbjct:  225 ALRLVELDNDADAIKQAAGILIMYTKNLVEQPDVPRYRRIATGNANFKQKIEPLQHHIALLTSIGFEKVGMSMEWKWHEQ--PS----SLTILKAAVSAFESAVANNGDVLSLA 332          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A662XYR8_9STRA (PUB domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYR8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.070e-12
Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARPN 1656
            AL  +  +N+ +  K    +L M + NL+ +P VPRYRRI T N NFK+++ PL+ +  +++++GF+T G   EW WH  S  + +   N A+L  ++KA+ +++ PN
Sbjct:  251 ALKKLRTENSLEQLKLAAGILSMYVKNLVENPEVPRYRRIATGNANFKQKIEPLKHYEELLKSIGFETAGLNMEWKWHTASRTTGAFDENLAILRALLKALQSLSSPN 358          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A1W0A225_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A225_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 7.270e-12
Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSSNNKAVLEDVVKAIDAVARPNGPPLSSA 1677
            AL  V  +N +   K   ++L M   NL+  PNVPRYRRI T N NFK+++ PL+ H A++ ++GF+  G   EW WH  S PS ++N   +L+  + A ++    +G  LS A
Sbjct:  225 ALKQVEIENNADIVKQAASILIMYTKNLVEQPNVPRYRRIATGNANFKQKIEPLKHHLALLTSIGFEKVGMSMEWKWH--STPSYTTN-LTILKAAIHAFESAVANDGEVLSVA 335          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A225UQA1_9STRA (PUB domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UQA1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 7.770e-12
Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARP 1653
            AL  +  DN+ +  K    +L M + NL+ +P+VPRYRR+   N NFK+++ PL+ H  +++++GF+T G   EW WH  S  + +   N A+L  ++KA+ ++  P
Sbjct:  156 ALKKLRTDNSLEQLKLAAGILSMYVKNLVENPDVPRYRRVAPGNANFKQKIEPLKHHEELLKSIGFETAGLNMEWKWHTASKTTGAFDENIAILRALLKALQSLTNP 262          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A6G0WDJ2_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDJ2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.600e-11
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSS 1596
            AL +V  DNT +  K    +L M   NLI HP+VPRYRRI T N NFK+++ PL+ +  ++ ++GF+  G   EW WH  S P+ +S
Sbjct:  215 ALELVEKDNTPEVIKTAATILLMYTKNLIEHPDVPRYRRIATGNANFKQKIEPLKHYEQLLSSIGFEKAGMNMEWKWH--SAPAFNS 299          
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: G4ZSR1_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZSR1_PHYSP)

HSP 1 Score: 79.3 bits (194), Expect = 1.860e-11
Identity = 39/107 (36.45%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARP 1653
            AL  +  +N+ +  K    +L M I NL+ +P+VPRYRRI+  N NFK+++ PL+ H  +++++GF+T G   EW WH  S  + +   N A+L  ++KA+ ++  P
Sbjct:  234 ALKKLRTENSLEQLKLSAGILSMYIKNLVENPDVPRYRRISPGNANFKQKIEPLKHHEELLKSIGFETTGLNMEWKWHTASKMTGAFDENIAILRALLKALQSLTNP 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G592_ECTSI1.180e-19054.34Peroxisomal membrane protein PEX14 n=2 Tax=Ectocar... [more]
A0A836C861_9STRA2.000e-2730.78Peroxisomal membrane protein PEX14 n=1 Tax=Tribone... [more]
A0A5D6Y310_9STRA8.350e-1335.65Peroxisomal membrane protein PEX14 n=1 Tax=Pythium... [more]
A0A662X5Z0_9STRA9.880e-1336.11PUB domain-containing protein (Fragment) n=1 Tax=N... [more]
T0PZR0_SAPDV1.040e-1240.35Peroxisomal membrane protein PEX14 n=1 Tax=Saprole... [more]
A0A662XYR8_9STRA5.070e-1236.11PUB domain-containing protein n=1 Tax=Nothophytoph... [more]
A0A1W0A225_9STRA7.270e-1238.60Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A225UQA1_9STRA7.770e-1235.51PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A6G0WDJ2_9STRA1.600e-1143.68Peroxisomal membrane protein PEX14 n=1 Tax=Aphanom... [more]
G4ZSR1_PHYSP1.860e-1136.45PUB domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig165contigP-littoralis_Contig165:441766..447721 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G592
Preferred namePEX14
PFAMsPex14_N
Model size3255
Max annot lvl2759|Eukaryota
KEGG koko:K13343,ko:K16284
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001650,GO:0003674,GO:0003712,GO:0003714,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0005886,GO:0006355,GO:0006464,GO:0006605,GO:0006625,GO:0006807,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007031,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010970,GO:0015031,GO:0015631,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016043,GO:0016558,GO:0016560,GO:0016561,GO:0016567,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0030674,GO:0030705,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0031903,GO:0031974,GO:0031981,GO:0032091,GO:0032446,GO:0032459,GO:0032460,GO:0032462,GO:0032463,GO:0032984,GO:0032991,GO:0033036,GO:0033365,GO:0034453,GO:0034613,GO:0036211,GO:0036250,GO:0042579,GO:0042802,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043393,GO:0043412,GO:0043433,GO:0043574,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044721,GO:0044743,GO:0045184,GO:0045892,GO:0045934,GO:0046907,GO:0047485,GO:0048487,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051090,GO:0051098,GO:0051100,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0055085,GO:0060090,GO:0060255,GO:0065002,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072384,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0098588,GO:0098805,GO:0099111,GO:0140110,GO:1901090,GO:1901091,GO:1901093,GO:1901094,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:1990351,GO:1990415,GO:1990429,GO:2000112,GO:2000113,GO:2001141
Exons7
Evalue3.23e-196
EggNOG OGsKOG2629@1|root,KOG2629@2759|Eukaryota
Ec32 ortholog descriptionPUB domain
Ec32 orthologEc-14_006670.1
EC2.3.2.27
Descriptionperoxisome transport along microtubule
Cds size2343
COG categoryO
BRITEko00000,ko00001,ko01000,ko04121,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig165.99.2prot_P-littoralis_Contig165.99.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig165 442603..447646 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789800.8637922-UTR-P-littoralis_Contig165:441765..4426021680789800.8637922-UTR-P-littoralis_Contig165:441765..442602Pylaiella littoralis U1_48UTRP-littoralis_Contig165 441766..442602 -
1680789800.9567707-UTR-P-littoralis_Contig165:447646..4477211680789800.9567707-UTR-P-littoralis_Contig165:447646..447721Pylaiella littoralis U1_48UTRP-littoralis_Contig165 447647..447721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789800.8765435-CDS-P-littoralis_Contig165:442602..4428361680789800.8765435-CDS-P-littoralis_Contig165:442602..442836Pylaiella littoralis U1_48CDSP-littoralis_Contig165 442603..442836 -
1680789800.889332-CDS-P-littoralis_Contig165:443246..4438531680789800.889332-CDS-P-littoralis_Contig165:443246..443853Pylaiella littoralis U1_48CDSP-littoralis_Contig165 443247..443853 -
1680789800.8997972-CDS-P-littoralis_Contig165:444209..4443231680789800.8997972-CDS-P-littoralis_Contig165:444209..444323Pylaiella littoralis U1_48CDSP-littoralis_Contig165 444210..444323 -
1680789800.910971-CDS-P-littoralis_Contig165:444645..4448441680789800.910971-CDS-P-littoralis_Contig165:444645..444844Pylaiella littoralis U1_48CDSP-littoralis_Contig165 444646..444844 -
1680789800.926688-CDS-P-littoralis_Contig165:445144..4461691680789800.926688-CDS-P-littoralis_Contig165:445144..446169Pylaiella littoralis U1_48CDSP-littoralis_Contig165 445145..446169 -
1680789800.9347227-CDS-P-littoralis_Contig165:447229..4472941680789800.9347227-CDS-P-littoralis_Contig165:447229..447294Pylaiella littoralis U1_48CDSP-littoralis_Contig165 447230..447294 -
1680789800.9427655-CDS-P-littoralis_Contig165:447547..4476461680789800.9427655-CDS-P-littoralis_Contig165:447547..447646Pylaiella littoralis U1_48CDSP-littoralis_Contig165 447548..447646 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig165.99.2

>prot_P-littoralis_Contig165.99.2 ID=prot_P-littoralis_Contig165.99.2|Name=mRNA_P-littoralis_Contig165.99.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=781bp
MREDQIENGVNFLVHPKAKTAPLSQRISFLENKGLTSEEISAALSRVESG
TDTHLSATAGGDKGISPSGVLSSTSSAFPTEASIPLWRQVAVPGALAVGA
VGALGAYYATSQSAARGGPTSSGDSSHAAAGRIPYSAGGVGAATTSAEAA
GYPGGGLSEPRGMEATGEDGDFGEGARAQDRLARSQRLESGVTHSPFDGV
TGGDGSFPGTGASEGAPVAAGEPSSSFLAGEFRRLSESMEQQTGQLVEAV
GAMKALASRAEQDSSSLLAARVSTHTSELRAELGTIKQLLLLQPRGEESG
GGTATGAQTGSAVVKAASVAGGSGAGSAGAITYPKTAFDEAKADSSGTSG
VKSGGAEGVKGAMDQQANCLEAKSGLLTEDREKEEARDREKQKAKEAADK
AAAEAAALAASEHRKDTARAALAVVLADNTSQAAKDGIAMLRMLIVNLIN
HPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEE
SGPSVSSNNKAVLEDVVKAIDAVARPNGPPLSSAPPTAPVTVASTPAFAS
LTPPAKVTPLSAKQPIDNTGSAADAVVSEASGVVRRSRFVPAAAAGAAAG
NSAVEGSDVNTSSAGAGAGAGAVQPSGARGDVLAAAAEVNGVGEDAGETA
RSSEGVGVPTGESAAVVAAAEPQAVGSVGTEQRDRREEDVAAEQGAPPAT
MAEVAATIQRGDEPPGIQVVEDRLSANAPSLEVSSRSSPPKPWEVLGLRR
SADEGVGGGTTAGATVGERERSWVPQQIVG*
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mRNA from alignment at P-littoralis_Contig165:441766..447721-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig165.99.2 ID=mRNA_P-littoralis_Contig165.99.2|Name=mRNA_P-littoralis_Contig165.99.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5956bp|location=Sequence derived from alignment at P-littoralis_Contig165:441766..447721- (Pylaiella littoralis U1_48)
CATAGACTACCACGACAGAGAGCGGGCACAGGACGGAAGCAAGAGCTAGC AACGAGGACAGAAAAAACGTATGACATGCGAGAAGATCAAATCGAAAATG GCGTGAACTTCTTGGTTCACCCCAAGGCAAAGACCGCTCCACTTTCGCAA AGGATCAGCTTCCTGGAAAACAAGGTTCGAAGACGAATGCTTTTCGAAAT GAGTTTATAGTTCAACCATCCATGTACCGGTAGGTATTATAAGATACAGC TGTTGTGACCAAGGTGAACGATTCCCGTGAACGACTGCTGCCTTGTGCTA TCGACCGCTGTTGTCTGTCTGCTTGCAGTCTCTCTCTTTCTCTCTCTCTC TCTCTCTCTCCCTCGCGCGCTATTATACCCATCGAACCTCCATCCAGCTG AGCCCTGATCTTCGATGCCCATGACAGGGACTGACCTCTGAGGAGATTTC AGCGGCTCTGTCGCGGGTGGAATCAGGCACCGATACTCACCTGTGAGTTC AACCCATGTCAAAACTACAGCAGTACAGCGGCAGCAGTGTCGGTGGTGTT TCCTTTGCTCTAGATCTCTTTGAGAACAATAAAAAAAAACAACGAAGTGA AGAACACACAAGAACAGATCCCAGACGGGAATCCGTGGGATCTGTTAGCA GGTCTGTACTGAGAGGGCTTCAAATGTCGGCCGGGAATAAATACACCGAT GACTGCATAGCCCGCGAGATCAAACTTGTCGAGGACATCAGCCTTAGAGT CGAGTCACCCCCAGCTTCCACGGCAAAGAAGTTTCGATACATTTACTCTT AGATACGCGAAACCCCATTCAGAGTCAGTATCCGCGCGAGCTCCTCTACG ACAGAGCCTGCTCAAATGAATGCTACGCTAGATTTTGAGGGCCTGTTTCA ACGGAAGTTGTGACACCTGGAGTAAAAGGCTAGCTGGGGATCGGGATTGC ATATGAGTGGTCGAGGCAGAAAACTGCATCCACCTGCTACGGGGCTAGCT GTTGCCTGCAAAAAAAAAATCGAAAGGATTTGACGAAGCGGAATAGAGAG TTATTGAGAGAAACTGGAAGGGTGTCATGAAACGACCAAATGTCCGAAAA GACCAACAGACACGCACGCTGCTAGCTGCTGCTGCTATGGGCATGCTAGG GACACACCAACACACCCACACACCCACACACACGTGCCGATGGCTCACAT GGACGAAAGCCAGGCGGCAGCGGGTTATGCCCTACCTGCTGTGCATCAGT TCCACAGGCCCCAAGCAGCGTCAGTGGGTGGCTACCCTGCCACCCAAGCC ATTTTCTTGGGGCTTCCATTTACATTGCTTCGTTTGGAACACAGACCAGC TGCAAACGCCCAACCCAAAAGTTCAAGTTCAAACAACATGGGGTCGATTT CACCGAAAAGCTCCTAGAAGATGTTCAAATTGGGCCCCCAATCCGGGTGC CACAGTTCCGTTAACGCGGGGTCTAGGGTGGAGGCTCGTTTCGTTGATTG TTGTGTCGCCTCGTCCGACTTTTTTTTTTCTTCGTCTTCGGCCCCGGACC AGATCTGCCACCGCGGGAGGAGACAAAGGAATATCACCCTCAGGCGTGCT TTCCTCGACATCTTCGGCGTTCCCGACTGAAGCCTCCATTCCCCTGTGGA GACAAGTGGCAGTTCCGGGAGCACTCGCGGTGGGTGCTGTCGGCGCCCTG GGCGCCTACTACGCCACTTCGCAATCGGCGGCAAGGGGCGGGCCAACCTC GAGCGGCGACTCTAGCCACGCGGCGGCGGGAAGAATACCGTACTCCGCTG GTGGTGTCGGGGCGGCAACAACATCCGCGGAGGCTGCCGGCTACCCGGGT GGAGGACTCTCAGAGCCACGAGGGATGGAAGCGACCGGCGAGGACGGCGA TTTCGGTGAGGGCGCCCGCGCTCAGGATAGATTGGCTCGTTCCCAGCGAC TTGAGAGCGGGGTCACCCACTCCCCATTCGATGGCGTTACCGGGGGTGAC GGTAGCTTTCCCGGAACTGGAGCCAGCGAAGGGGCGCCAGTGGCAGCGGG CGAGCCCTCCTCGTCGTTTCTCGCCGGAGAATTTCGACGCCTTTCCGAGT CGATGGAACAGCAGACGGGTCAACTGGTGGAAGCGGTTGGGGCGATGAAG GCACTCGCGTCTCGTGCCGAGCAGGACAGCAGCAGCCTCTTGGCCGCGCG CGTAAGCACCCACACCTCTGAACTTCGAGCCGAGCTCGGGACCATCAAAC AGCTCCTTCTGCTGCAGCCTAGGGGTGAAGAAAGCGGCGGCGGCACAGCG ACAGGCGCTCAAACCGGCAGTGCTGTAGTGAAGGCGGCCAGCGTGGCCGG TGGTAGCGGGGCAGGAAGTGCAGGCGCAATAACTTATCCGAAGACCGCCT TTGACGAGGCGAAGGCAGACAGTTCGGGCACAAGCGGTGTCAAAAGTGGC GGAGCAGAAGGCGTCAAGGGGGCGATGGACCAGCAGGCTAACTGTCTGGA GGCAAAGAGTGGACTTCTGACCGAGGACCGAGAGAAAGAGGAGGCTAGGG ACCGAGAGAAGCAGAAGGCCAAAGAAGGTGCTTTTGCGCCCTTACTGTCT ACTTGTAGGCAAGGGGTGGGAGTGTCGCTCGGTTTGTGCGTGTAGCTTCC CTCTGTCGAAAGCGGAAGTTCGTGGGGAACAACTCGGCATTCGAGACGGC ACCTTGCTGCACCTACGAAAAAGAGTGAATCGCAGGAGATTTTCTTCCCG TTTTGTGACGAGCCCAATCCATCCACAGAACGTAGAGGTCCAACCTCTTG TGAGGGAGGCGATTGAACCTGTGATCGGGAATGTTGATGACGTTTCTGCT CACGTTGCCCGTCTATCGTCCAAGCAGCCGCCGACAAAGCAGCGGCAGAA GCGGCTGCGCTAGCGGCGTCAGAGCACCGGAAAGACACCGCTCGAGCGGC GCTCGCCGTGGTGTTGGCGGATAACACGTCGCAGGCGGCCAAAGACGGGA TCGCGATGTTGCGGATGCTAATCGTGAACCTCATCAACCACCCGAACGTC CCGCGATATCGCCGCATCACCACCAGGTGCGCTTTCTCCAGCACATTTGT AAATGACCATGCCAGATCTTTGCCAAATCAGCAATGCTGTTGACAATCAT GCCCACAACACACGCCTGGCAGACTTTTCCCGAACGAACTCTGTCATCTC CATTCACCGCCAGCTCTTTGTTACTTCCGGCTGCGCTCTCCCTTGTCACG TATGTTGTGTTGTATTGAGCCATGTGGCTGATGCTGCAGATTTGTCTGCC CGGAAATTTCCAGCCAAGGCTATCTCGAAATTCCCCTGGGTACATCGCTC TCAGCCTTGATTGCATGCGATACTCGTCTGCTGCTTTATTGCCGACAGCA ATGACAACTTCAAGAAGAGGCTGTTGCCGTTGGAAGGTCACAGGGCGATG ATGGAGGCGGTTGGCTTCAAGACGAAGGGCAACGTCTGGGAGTGGACTTG GCACGAGGAAAGGTGAGTTGCTGTGTTTGGAACCCACGGTGATTACGACT ACAGGTGGTACCTGGCTGCATGGTGAGGGGTCTGGACGATGGTTATCTTC TCTTCCGAGGTGTCAGAGGGCGTGAATGGTTGATCGTTCCGCTCAGCACT CGATAGAGCGAACTCCGCTATTTCTTGGACTATGTCCATATCAACAGCCG CGCTGCGATTCCTTTTCTTCGAAATCATATAGTTCGAATGTAATATGTAC GCTCGAAGTTCGATAGCTTCTCATATCTACCGCGGTATCAGCAAAAGCAG TAGTCGGCATCTGGTGTACACCTTACGCCCGAAGATTTCGTCCTCCGCGT CCGTGCCCGCCCGCCCAGTGGTCCATCGGTCTCAAGCAACAACAAGGCCG TACTGGAGGACGTCGTCAAGGCGATAGATGCAGTCGCGAGACCGAACGGC CCACCCTTGTCCAGCGCACCGCCGACCGCACCCGTCACGGTTGCCTCCAC CCCGGCTTTTGCTTCTCTCACGCCGCCGGCGAAGGTGACCCCCTTAAGTG CCAAGCAGCCCATCGACAACACTGGAAGCGCCGCCGATGCTGTTGTGTCA GAGGCAAGCGGTGTCGTGCGACGGTCGCGATTTGTTCCGGCAGCAGCTGC GGGTGCGGCGGCAGGCAACAGCGCGGTCGAAGGCAGCGACGTAAATACCT CGAGTGCTGGCGCTGGCGCTGGTGCTGGTGCTGTGCAGCCGTCGGGGGCG AGGGGAGACGTCCTTGCGGCGGCTGCGGAGGTTAACGGGGTCGGCGAAGA TGCCGGTGAAACAGCGCGCTCATCTGAGGGTGTTGGAGTCCCGACTGGTG AGTCGGCGGCGGTCGTAGCGGCGGCAGAGCCCCAGGCAGTGGGCTCGGTG GGCACAGAGCAACGCGACCGTAGAGAGGAAGATGTCGCCGCCGAGCAAGG AGCACCTCCCGCGACGATGGCAGAGGTGAGATTTTCGCAGTCGGAAATGC GGGTACGGGTAAACGGCGTGGGTTTTTGGTGCGGTGTGCGACGTATTTCT GTATGGTTGATTGGCGTGCCTTGCCCTCTCATGTATTCCGGCCAGGTGAC GTTGTCTGCTCCATCGTTGGGTATGCTTTTTCGAAGGCCGTGAAGTTGGG ATTGAACAAAGTCGACTCAATGCGTGAGTGTTCTTTTGCATGACGTCAGA GTGCCTGTCTCTTTGCCTATGTACTTCGAAGTATCTGGTATTGCTTGTGC GATATCGAGGACGAGTCCTGAGGGGAGCCTATTTGCTCGGCCACGCGGTA GATGTAAGCGTGACTTGATTTACTGGACACCTTCCCATGTATTTGTTCCA TCGCCCCAAAAACAATCCGGAACTGGTCCAAGCAGGTGGCTGCCACAATC CAGCGAGGGGACGAGCCGCCGGGCATACAGGTTGTGGAGGATCGTCTCTC CGCCAATGCACCGTCGCTGGAAGTGTCGTCACGTTCCTCTCCGCCAAAGC CATGGGAGGTATTGGGGTTACGACGGTCAGCAGACGAAGGCGTCGGGGGA GGCACCACAGCTGGAGCGACGGTGGGGGAACGGGAGCGTTCGTGGGTACC GCAGCAGATAGTTGGGTAGGTTGCGGCCGCTACACGCCATGTCTGTTGAC CCTTGATGATGTTGAGCCAAAGTATCGCGTTTGGTAGTGACTGCGTGACG CCCCACTTCACACTGTGAATGAAACGACGAGTCCGGGATGGGGCGTCATA CTGGTTGAGTAAGGAACCTGCTCTCATAGGGCGTTTTTCGCTGGCTCTCT TCTGTGGTTCTGTGTGAGCCACGAGATGTAGAGTAACCCATTGTCGTGTT TCAGATGGTTGAACCCACACGAGAATGGGCTCCGCCGGTACCATAACCGT GGAAAGACAAAATAATTCACGTACAAACAGCAGTAGATTTGTTCATTGTT CTTGCTCATTCCGCATATCAGTGCAGCGCACGGAAGCTTTGAAGTGGAAC TCGTTCACGATCATTGCTGCCTACGAAAGCTTCGAAGTGGAATGCGTTCA CGATAACCACAGGAGGTCTTGGGCTGAGAGATACAAATGATATTGGCGGG TGCGTGGAGTTTCTTTGCTTGATACAGGACAGTTGTCTTCCGGACGGACA TGTCAAAAACTGGGCTATAGATTGAAAACGGTTGATAATGCATTTTAGAT GCCCCATCAGCCAACAAAACGTTCCAATGTCAGCCTGAGGGAATATGGCT TGTCGTCATTCAAAATACTGATGGATTTCGCGTCGTGGAAGTGAACGAGC TGTGCGTGGAACTTACCCTGTGGTACTTCGTTACTAACTTAAGATGTCGA ACTCCCAGAGGAATTAAATGGTCGAACTCCCAGAGGAAGCACCGCGCGAA CGAACCCACGACGAGGAGGAGGAAGGGTCGAAATGCCAGCGAGGAAGCAT CCCACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig165:441766..447721-

>mRNA_P-littoralis_Contig165.99.2 ID=mRNA_P-littoralis_Contig165.99.2|Name=mRNA_P-littoralis_Contig165.99.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2343bp|location=Sequence derived from alignment at P-littoralis_Contig165:441766..447721- (Pylaiella littoralis U1_48)
ATGCGAGAAGATCAAATCGAAAATGGCGTGAACTTCTTGGTTCACCCCAA
GGCAAAGACCGCTCCACTTTCGCAAAGGATCAGCTTCCTGGAAAACAAGG
GACTGACCTCTGAGGAGATTTCAGCGGCTCTGTCGCGGGTGGAATCAGGC
ACCGATACTCACCTATCTGCCACCGCGGGAGGAGACAAAGGAATATCACC
CTCAGGCGTGCTTTCCTCGACATCTTCGGCGTTCCCGACTGAAGCCTCCA
TTCCCCTGTGGAGACAAGTGGCAGTTCCGGGAGCACTCGCGGTGGGTGCT
GTCGGCGCCCTGGGCGCCTACTACGCCACTTCGCAATCGGCGGCAAGGGG
CGGGCCAACCTCGAGCGGCGACTCTAGCCACGCGGCGGCGGGAAGAATAC
CGTACTCCGCTGGTGGTGTCGGGGCGGCAACAACATCCGCGGAGGCTGCC
GGCTACCCGGGTGGAGGACTCTCAGAGCCACGAGGGATGGAAGCGACCGG
CGAGGACGGCGATTTCGGTGAGGGCGCCCGCGCTCAGGATAGATTGGCTC
GTTCCCAGCGACTTGAGAGCGGGGTCACCCACTCCCCATTCGATGGCGTT
ACCGGGGGTGACGGTAGCTTTCCCGGAACTGGAGCCAGCGAAGGGGCGCC
AGTGGCAGCGGGCGAGCCCTCCTCGTCGTTTCTCGCCGGAGAATTTCGAC
GCCTTTCCGAGTCGATGGAACAGCAGACGGGTCAACTGGTGGAAGCGGTT
GGGGCGATGAAGGCACTCGCGTCTCGTGCCGAGCAGGACAGCAGCAGCCT
CTTGGCCGCGCGCGTAAGCACCCACACCTCTGAACTTCGAGCCGAGCTCG
GGACCATCAAACAGCTCCTTCTGCTGCAGCCTAGGGGTGAAGAAAGCGGC
GGCGGCACAGCGACAGGCGCTCAAACCGGCAGTGCTGTAGTGAAGGCGGC
CAGCGTGGCCGGTGGTAGCGGGGCAGGAAGTGCAGGCGCAATAACTTATC
CGAAGACCGCCTTTGACGAGGCGAAGGCAGACAGTTCGGGCACAAGCGGT
GTCAAAAGTGGCGGAGCAGAAGGCGTCAAGGGGGCGATGGACCAGCAGGC
TAACTGTCTGGAGGCAAAGAGTGGACTTCTGACCGAGGACCGAGAGAAAG
AGGAGGCTAGGGACCGAGAGAAGCAGAAGGCCAAAGAAGCCGCCGACAAA
GCAGCGGCAGAAGCGGCTGCGCTAGCGGCGTCAGAGCACCGGAAAGACAC
CGCTCGAGCGGCGCTCGCCGTGGTGTTGGCGGATAACACGTCGCAGGCGG
CCAAAGACGGGATCGCGATGTTGCGGATGCTAATCGTGAACCTCATCAAC
CACCCGAACGTCCCGCGATATCGCCGCATCACCACCAGCAATGACAACTT
CAAGAAGAGGCTGTTGCCGTTGGAAGGTCACAGGGCGATGATGGAGGCGG
TTGGCTTCAAGACGAAGGGCAACGTCTGGGAGTGGACTTGGCACGAGGAA
AGTGGTCCATCGGTCTCAAGCAACAACAAGGCCGTACTGGAGGACGTCGT
CAAGGCGATAGATGCAGTCGCGAGACCGAACGGCCCACCCTTGTCCAGCG
CACCGCCGACCGCACCCGTCACGGTTGCCTCCACCCCGGCTTTTGCTTCT
CTCACGCCGCCGGCGAAGGTGACCCCCTTAAGTGCCAAGCAGCCCATCGA
CAACACTGGAAGCGCCGCCGATGCTGTTGTGTCAGAGGCAAGCGGTGTCG
TGCGACGGTCGCGATTTGTTCCGGCAGCAGCTGCGGGTGCGGCGGCAGGC
AACAGCGCGGTCGAAGGCAGCGACGTAAATACCTCGAGTGCTGGCGCTGG
CGCTGGTGCTGGTGCTGTGCAGCCGTCGGGGGCGAGGGGAGACGTCCTTG
CGGCGGCTGCGGAGGTTAACGGGGTCGGCGAAGATGCCGGTGAAACAGCG
CGCTCATCTGAGGGTGTTGGAGTCCCGACTGGTGAGTCGGCGGCGGTCGT
AGCGGCGGCAGAGCCCCAGGCAGTGGGCTCGGTGGGCACAGAGCAACGCG
ACCGTAGAGAGGAAGATGTCGCCGCCGAGCAAGGAGCACCTCCCGCGACG
ATGGCAGAGGTGGCTGCCACAATCCAGCGAGGGGACGAGCCGCCGGGCAT
ACAGGTTGTGGAGGATCGTCTCTCCGCCAATGCACCGTCGCTGGAAGTGT
CGTCACGTTCCTCTCCGCCAAAGCCATGGGAGGTATTGGGGTTACGACGG
TCAGCAGACGAAGGCGTCGGGGGAGGCACCACAGCTGGAGCGACGGTGGG
GGAACGGGAGCGTTCGTGGGTACCGCAGCAGATAGTTGGGTAG
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