mRNA_P-littoralis_Contig165.99.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: D7G592_ECTSI (Peroxisomal membrane protein PEX14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G592_ECTSI) HSP 1 Score: 581 bits (1498), Expect = 1.180e-190 Identity = 432/795 (54.34%), Postives = 490/795 (61.64%), Query Frame = 1
Query: 76 MREDQIENGVNFLVHPKAKTAPLSQRISFLENKGLTSEEISAALSRVESGTDTHLSATAGGDKGISPSGVLSSTSSAFPTEASIPLWRQVAVPGALAVGAVGALGAYYATSQSAARGGPTSSGDSSH----AAAGRIPYSAGGVGAATTSAEAAGYPGGGLSEPRGMEATGEDGDFGEGARAQDRLARSQRLESGVTHSPFDGVTGGDGSFPGTGASEGAPVAAGEPSSSFLAGEFRRLSESMEQQTGQLVEAVGAMKALASRAEQDSSSLLAARVSTHTSELRAELGTIKQLLLLQPRGEESGGGTATGAQTGSAVVKAASVAGGSGAGSAGAITYPKTAFDEAKADSSGT--SGVKSGGAEGVKGAMDQQANCLEAKSGLLTEDREKEEARXXXXXXXXXXXXXXXXXXXXXXXSEHRKDTARAALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSSNNKAVLEDVVKAIDAVARPNGPPLSSAPPTAPVTVASTPAFASLTPPAKVTPL-------------SAKQPIDNTGSAADAVVSEASGVVRRSR----FVPAAAAGAAAGNSAVEGSDVNTSSAXXXXXXXAVQPSGARGDVLAAAAEVNGVGEDAGETXXXXXXXXXXXXXSAAVVAAA-EPQAVGSVGTEQRDRREEDV-AAEQGAPPATMAEVAATIQRGDEPPGIQVVEDRLSANAPSLEVSSRSSPPKPWEVLGLRRSAD-EGVGGGTTAGATVGER 2382
MREDQI NGVNFLVHPKAKTAPLSQRISFLENKGLT+EEISAALSR E G D++ SATAGG+ AFP EASIPLWRQVAVPG LA+GAVGALG YYA S+S GG AAAGRIP SAG A T Y G G SEPRG +A E+ + E A Q RL RS+ LE G+ PFDG SE AP P S LAGEFRRL+E+MEQQTG LVEAV AMKALASRAEQDSSSLLAARV +HTSELRAELGTIKQLLLLQ E G GT + ++A S G + AG A + A +G G S AEG+KG D+QAN GL D E++ A+ XXXXXXXXXXXX +E RK TARAALA ++ADN++QAAKDG+AMLRML+ NL+N PNVPRYRRI TSNDNFKKRLLPLEGHRAMMEAVGFK KG++WEWTWHE+S PS SSNNKAVLED+VKAIDAVARPNGPPLS+A S + D+ G VSEA+G R S + A GAA AV+GSD SS A+ G R DVLAAAA+VNGVG DAG + V AAA E + G+VGT++ D E V A E+GAPPA++AEVAA IQRGDEPPGI+VVEDRLS +APS VSSR SPPKPWEVL A+ +G+ G G G R
Sbjct: 1 MREDQIVNGVNFLVHPKAKTAPLSQRISFLENKGLTAEEISAALSRAEGGEDSNGSATAGGNSXXXXXXXXXXXXXAFPAEASIPLWRQVAVPGVLAMGAVGALGTYYAASRS--EGGXXXXXXXXXXXXXAAAGRIPNSAGATEATT-------YGGVGRSEPRGADAAAENSAYAERAYEQGRLTRSETLEDGMAFLPFDG-------------SEQAPPGT-SPGESPLAGEFRRLTETMEQQTGHLVEAVEAMKALASRAEQDSSSLLAARVGSHTSELRAELGTIKQLLLLQAGVEGGGAGTKS--------MRAISSVGAADAGEASRKATTDQSDMSAGVIGAGXXXEGAGSRSAEGLKGGADEQANGASVSGGLPVRDPEEDMAQEAXXXXXXXXXXXXA--------TEGRKATARAALAALVADNSAQAAKDGMAMLRMLVANLVNQPNVPRYRRIATSNDNFKKRLLPLEGHRAMMEAVGFKPKGSLWEWTWHEDSTPSASSNNKAVLEDIVKAIDAVARPNGPPLSTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAGWSTRSSGDHGGGGT--AVSEANGGARGSSRPSLVSDSGAVGAAGDGDAVKGSDGRPSSRGGGGSAPAL---GTRNDVLAAAAQVNGVGGDAGGASSRIAQGDEAPSAAEPVAAAAAESRGKGTVGTKENDLVVEAVEATERGAPPASIAEVAAAIQRGDEPPGIRVVEDRLSDSAPSFAVSSRPSPPKPWEVLSSPEDANGDGIEGRVGTGGAHGYR 751
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A836C861_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C861_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.000e-27 Identity = 205/666 (30.78%), Postives = 279/666 (41.89%), Query Frame = 1
Query: 76 MREDQIENGVNFLVHPKAKTAPLSQRISFLENKGLTSEEISAALSRVESG-----TDTHLSATAGGDKGISPSGVLSSTSSAFPTEASIPLWRQVAVPGALAVGAVGALGAYYATSQSAARGGPTSS------GDSSHAAAGRIPYSAGGVGAATTSAEAAGYPGGGLSEPR--------GMEATGEDGDFGEGARAQDRLARSQRLESGVTHSPFDGVT------GGDGSF----------------PGTGASEGAPVAAGEPSSSF-LAGEFRRLSESMEQQTGQLVEAVGAMKALASRAEQD-----------------------------------------------------SSSLLAARVSTHTSELRAELGTIKQLLLLQPRGEESGGGTATGAQTGSAVVKAASVAGGSGAGSAGAITYPKTAFDEAKADSSGTSGVKSGGAEGVKGAMD---------------------------QQANCLEAKSGLLTEDREKEEARXXXXXXXXXXXXXXXXXXXXXXXSEHRKDTARAALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFK-TKGNVWEWTWH-------------EESGPSVSSNN-KAVLEDVVKAIDAVARPNGP 1662
+RE Q+E+GV FL HP+ + +PLSQRISFLE KGLT EEIS A++R G D HL+A+ GD S PLWR++ +PGAL +G +GA A A +S GD++ A A + S PGGG++ R G +A G DGD A R A + E V+ + T D + PG A+ A AA S++ LA EF +LS +M+ Q+ L EAV MKALA++ E+D + +LL A+V+ T+ELRAEL TIKQLLL+ G +A A SA + A+ A +G +A + E + S G + V GA+ A+ QA XXXXXXXXXXXXXXXXX + ARAAL + A++++ K G+ ML+M I NLI HP VPRYRR++ SN N+ + PLEGH A++EAVGFK G EW WH E G V + +AVL++ V ++ + + P
Sbjct: 2 VRESQVESGVKFLSHPQVRASPLSQRISFLEKKGLTPEEISEAMTRSGVGGFSAADDPHLTASPTGDSD------------------SDPLWRKLLLPGALLAAGLGVVGATRAREGGGAHPPAPASPRRLENGDAAAAXXXXXXXXAHEL----ESPSMGRSPGGGVASRRRGGRPPRPGADAAG-DGD------AAARAAHAPLAEPDVSVTAIGSTTLLTRQCSADATTRAAPAATVVSRIHPCRPGADAAGDADDAADGASATLRLAEEFGKLSGAMQAQSAALGEAVENMKALAAQREKDDKASSESQSESWLLLFLQDCTAVSXXXXXXXXXXXXXXXXXXXXXXXXCALLTAQALLTAQVNAQTAELRAELATIKQLLLMHT------GASALAAGNSSAAIGGAAPATDAGDAAAAGV--------EVEVVSDGDAAVNGAGADQQARAIHIFTDXXXXXXXXXXXXXXXXXXXXXXVAQAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARIEQDRAQKLAAARAALRDLHANSSAAQLKSGVPMLKMFISNLIQHPTVPRYRRLSLSNQNYTTLVAPLEGHTALLEAVGFKRASGTQMEWGWHGSGAQHGXXXXXAAEDGKGVDAETVQAVLKEAVAGLERLMKGEDP 624
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A5D6Y310_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y310_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 8.350e-13 Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 1
Query: 1315 RKDTARAALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHE-ESGPSVSSNNKAVLEDVVKAIDAVARPN 1656
R D A L ++ N+ + K +L M + NL+ +P+VPRYRRI N NFK+++ PL+ H +++A+GF+T G EW WH + +N A+L V+KA+ ++ P+
Sbjct: 287 RADKVEATLKLIRTQNSLEQLKLAAGILTMYVKNLVENPDVPRYRRIAPGNANFKQKVEPLKHHEDLLKAIGFETNGLNMEWKWHTADRANGEFDDNLALLRAVLKALQSLTSPS 401
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A662X5Z0_9STRA (PUB domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X5Z0_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 9.880e-13 Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARPN 1656
AL + +N+ + K +L M + NL+ +P VPRYRRI T N NFK+++ PL+ + +++++GF+T G EW WH S + + N A+L ++KA+ +++ PN
Sbjct: 11 ALKKLRTENSLEQLKLAAGILSMYVKNLVENPEVPRYRRIATGNANFKQKIEPLKHYEELLKSIGFETAGLNMEWKWHTASRTTGAFDENLAILRALLKALQSLSSPN 118
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: T0PZR0_SAPDV (Peroxisomal membrane protein PEX14 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PZR0_SAPDV) HSP 1 Score: 82.8 bits (203), Expect = 1.040e-12 Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSSNNKAVLEDVVKAIDAVARPNGPPLSSA 1677
AL +V DN + A K +L M NL+ P+VPRYRRI T N NFK+++ PL+ H A++ ++GF+ G EW WHE+ PS + +L+ V A ++ NG LS A
Sbjct: 225 ALRLVELDNDADAIKQAAGILIMYTKNLVEQPDVPRYRRIATGNANFKQKIEPLQHHIALLTSIGFEKVGMSMEWKWHEQ--PS----SLTILKAAVSAFESAVANNGDVLSLA 332
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A662XYR8_9STRA (PUB domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYR8_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.070e-12 Identity = 39/108 (36.11%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARPN 1656
AL + +N+ + K +L M + NL+ +P VPRYRRI T N NFK+++ PL+ + +++++GF+T G EW WH S + + N A+L ++KA+ +++ PN
Sbjct: 251 ALKKLRTENSLEQLKLAAGILSMYVKNLVENPEVPRYRRIATGNANFKQKIEPLKHYEELLKSIGFETAGLNMEWKWHTASRTTGAFDENLAILRALLKALQSLSSPN 358
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A1W0A225_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A225_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.270e-12 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSSNNKAVLEDVVKAIDAVARPNGPPLSSA 1677
AL V +N + K ++L M NL+ PNVPRYRRI T N NFK+++ PL+ H A++ ++GF+ G EW WH S PS ++N +L+ + A ++ +G LS A
Sbjct: 225 ALKQVEIENNADIVKQAASILIMYTKNLVEQPNVPRYRRIATGNANFKQKIEPLKHHLALLTSIGFEKVGMSMEWKWH--STPSYTTN-LTILKAAIHAFESAVANDGEVLSVA 335
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A225UQA1_9STRA (PUB domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UQA1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.770e-12 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARP 1653
AL + DN+ + K +L M + NL+ +P+VPRYRR+ N NFK+++ PL+ H +++++GF+T G EW WH S + + N A+L ++KA+ ++ P
Sbjct: 156 ALKKLRTDNSLEQLKLAAGILSMYVKNLVENPDVPRYRRVAPGNANFKQKIEPLKHHEELLKSIGFETAGLNMEWKWHTASKTTGAFDENIAILRALLKALQSLTNP 262
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: A0A6G0WDJ2_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDJ2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.600e-11 Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVSS 1596
AL +V DNT + K +L M NLI HP+VPRYRRI T N NFK+++ PL+ + ++ ++GF+ G EW WH S P+ +S
Sbjct: 215 ALELVEKDNTPEVIKTAATILLMYTKNLIEHPDVPRYRRIATGNANFKQKIEPLKHYEQLLSSIGFEKAGMNMEWKWH--SAPAFNS 299
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Match: G4ZSR1_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZSR1_PHYSP) HSP 1 Score: 79.3 bits (194), Expect = 1.860e-11 Identity = 39/107 (36.45%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 1336 ALAVVLADNTSQAAKDGIAMLRMLIVNLINHPNVPRYRRITTSNDNFKKRLLPLEGHRAMMEAVGFKTKGNVWEWTWHEESGPSVS-SNNKAVLEDVVKAIDAVARP 1653
AL + +N+ + K +L M I NL+ +P+VPRYRRI+ N NFK+++ PL+ H +++++GF+T G EW WH S + + N A+L ++KA+ ++ P
Sbjct: 234 ALKKLRTENSLEQLKLSAGILSMYIKNLVENPDVPRYRRISPGNANFKQKIEPLKHHEELLKSIGFETTGLNMEWKWHTASKMTGAFDENIAILRALLKALQSLTNP 340 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig165.99.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig165.99.2 >prot_P-littoralis_Contig165.99.2 ID=prot_P-littoralis_Contig165.99.2|Name=mRNA_P-littoralis_Contig165.99.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=781bp MREDQIENGVNFLVHPKAKTAPLSQRISFLENKGLTSEEISAALSRVESGback to top mRNA from alignment at P-littoralis_Contig165:441766..447721- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig165.99.2 ID=mRNA_P-littoralis_Contig165.99.2|Name=mRNA_P-littoralis_Contig165.99.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5956bp|location=Sequence derived from alignment at P-littoralis_Contig165:441766..447721- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig165:441766..447721- >mRNA_P-littoralis_Contig165.99.2 ID=mRNA_P-littoralis_Contig165.99.2|Name=mRNA_P-littoralis_Contig165.99.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2343bp|location=Sequence derived from alignment at P-littoralis_Contig165:441766..447721- (Pylaiella littoralis U1_48)back to top |