mRNA_P-littoralis_Contig165.93.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig165.93.1
Unique NamemRNA_P-littoralis_Contig165.93.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: A0A6H5K058_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K058_9PHAE)

HSP 1 Score: 1187 bits (3071), Expect = 0.000e+0
Identity = 624/795 (78.49%), Postives = 665/795 (83.65%), Query Frame = 1
Query:  292 MRRPRVTESA------MPTRTATATQG-----RAPRQLTPAVRGKRRHLLASLAAGSILLTRCAVAFHGHVPHAARAAERRTRRGTRNSTPT-RATRLPDQVTAVGTVIEDDKLDTSAVLDDLARGEVGTWEGHEYGFDWYLEQARRGMSSGKAGFAPLRMDFWRPTEAVEELSAWDTLYIILRNLGQMVGLPSVDNAPVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGGSGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTSLRGPSPA-KEVNGHGAAS-GHSA----------INGASLDVAAAKAKAVSRAATQAVGEQMPKSNIESAVPIAHANHGKGKCPMHVGGAAANERGL 2604
            MRRPR T +A      +PT T T         R PR L     G RRH+LAS AAGS+LL++CAV FH HVP A+      TR GTRN+ PT RATRLP Q +   TV+E D++DTSAVLDDLAR +V  WEGHEYGFDWYLE+ARRGM S  +GFAPLRM+FWRPTEA E+L+ WD +YIILRNLGQMVGLPSVDNAPVAKI+KYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKS VGDYDKGVLATILEPIMGKGLIPADP TWKVRRRAIVPGFHKAWLNRMMRLFAECADTL+VEAEAAAR+G+VLDMEEKFCSLSLDIIGRAVFN++F SVS+ESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARD+GLLN VLDKLI KALDTQE AD+EELERRDLD +EDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAK+H EID CMGPDGSH+PTFDDLP LLYTRLAL+EALRLYPEPPVIIRRALKETELP+GG  GPVKLVKGTDVFISTWNLHRSK LWDRP +YMPERFLSEF N+ V GWKGFTPRMG GLYPSE+DADFAFLPFGGG RKCVGDQFAMMEATVTLAMMLKKLDF MVGTPEDVGMVTGATIHTKNGLKMT SLR PS A   VNGH AA+ GHS+          INGA LD A A            VG  +P     S         G+GKCPMHV   +  E GL
Sbjct:    1 MRRPRATATAANGTTAVPTSTTTTAAALDPAVRPPRVLKRGRCGTRRHVLASFAAGSLLLSKCAVGFHAHVPPASG-----TRGGTRNAPPTTRATRLPYQASTGTTVVEGDQVDTSAVLDDLARVDVEGWEGHEYGFDWYLEKARRGMISSNSGFAPLRMNFWRPTEAAEKLTLWDMIYIILRNLGQMVGLPSVDNAPVAKIDKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSSVGDYDKGVLATILEPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLVVEAEAAARTGQVLDMEEKFCSLSLDIIGRAVFNYEFDSVSKESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDMGLLNTVLDKLIQKALDTQEMADIEELERRDLDEVEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKVHAEIDECMGPDGSHMPTFDDLPGLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGADGPVKLVKGTDVFISTWNLHRSKELWDRPAEYMPERFLSEFHNKGVVGWKGFTPRMGAGLYPSEIDADFAFLPFGGGTRKCVGDQFAMMEATVTLAMMLKKLDFTMVGTPEDVGMVTGATIHTKNGLKMTASLREPSSAGPAVNGHAAAANGHSSTGINGEGINGINGAKLDAAVAAXXXXXXXXXXXVGNAVPGDTTASV--------GEGKCPMHVATGSLGEGGL 782          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: D7G594_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G594_ECTSI)

HSP 1 Score: 1125 bits (2909), Expect = 0.000e+0
Identity = 573/689 (83.16%), Postives = 608/689 (88.24%), Query Frame = 1
Query:  574 TVIEDDKLDTSAVLDDLARGEVGTWEGHEYGFDWYLEQARRGMSSGKAGFAPLRMDFWRPTEAVEELSAWDTLYIILRNLGQMVGLPSVDNAPVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGGSGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTSLRGPSPA-KEVNGHGAA-SGHSA--ING--------ASLDVAAAKAKAVSRAATQAVGEQMPKSNIESAVPIAHANHGKGKCPMHVGGAAANERGL 2604
            TV+E +++D SAVLDDLAR +V  WEGHE+GFDWYLE+ARRGM S  +GFAPLRM+FWRPTEA EELS+WD +YIILRNLGQMVGLPSVDNAPVAKI+KYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKS VGDYDKGVLATIL+PIMGKGLIPADP TWKVRRRAIVPGFHKAWLNRMMRLFAECADTL+VEAEAAAR+G+VLDMEEKFCSLSLDIIGRAVFN++F SVS+ESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLN VLDKLI +ALDTQETADVEELERRDLD +EDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNL QNPEYLAK+H EID CMGPDGSH+PTFDDLP LLYTRLAL+EALRLYPEPPVIIRRALKETELP+GG  GPVKLVKGTDVFISTWNLHRSK LWDRP +YMPERFLSEFRNE V GWKGFTP+MG GLYPSE+DADFAFLPFGGG RKCVGDQFAMMEATV+LAMMLKKLDF +VGTPEDVGMVTGATIHTKNGLKMT SLR PS A   VNGH AA +GHS+  ING        A LD A A           AVG  MP  +  S         G+GKCPMHV  A+  E GL
Sbjct:   93 TVVEGEQVDASAVLDDLARVDVEGWEGHEHGFDWYLEKARRGMISSNSGFAPLRMNFWRPTEAAEELSSWDMIYIILRNLGQMVGLPSVDNAPVAKIDKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSSVGDYDKGVLATILQPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLVVEAEAAARTGQVLDMEEKFCSLSLDIIGRAVFNYEFDSVSKESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNTVLDKLIQRALDTQETADVEELERRDLDAVEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLAQNPEYLAKMHAEIDECMGPDGSHMPTFDDLPGLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGADGPVKLVKGTDVFISTWNLHRSKELWDRPAEYMPERFLSEFRNEGVVGWKGFTPKMGAGLYPSEIDADFAFLPFGGGTRKCVGDQFAMMEATVSLAMMLKKLDFTLVGTPEDVGMVTGATIHTKNGLKMTVSLREPSSAGPAVNGHAAAVNGHSSTGINGXXXXXXXGAKLDAAVAXXXXXXXXXXDAVGNAMPGDSSASV--------GEGKCPMHVTTASLEEGGL 773          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: A0A835ZEV7_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV7_9STRA)

HSP 1 Score: 800 bits (2065), Expect = 1.740e-274
Identity = 400/564 (70.92%), Postives = 457/564 (81.03%), Query Frame = 1
Query:  664 GFDWYLEQARRGMSSGKAGFAPLRMDFWRPTEAVEELSA---WDTLYIILRNLGQMVGLPSVDNAPVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGGSGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMG-GGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKM 2343
            GFDW LE+ARR +      F+P RMDFWRP E   E+     WDT+YI+L N+ Q  G  SVD APVA++  + GS+ TFLQKV++GRLEDLAGGPLFL+LEKYF   GPVYKLAFGPRSFIVVSDPVMAKH+LKS VG YDKGVLA+ILEPIMGKGLIPADP TWKVRRRAIVPGFHK WLNRMMRLFAEC + L+ +   AA  G  LDMEEKFCS+SLDIIGRAVFN+DFGS ++ESP   AVYRVLREAEHRSSSFIPYWKLPFA + +ASQVEF+ D+ LLN+VLD+LI KA+ TQ+ ADVEELE RDLD  EDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAA+LTWTLFNL QNPE  A++  EIDA +GPD   +P FDDL  L  TRLAL+EALRLYPEPPV+IRRAL+E  LP GG   P++L +G+DVFISTWNLHRS ALWD P +Y PERF+    N  V GW G+ P++G  GLYP+E+ +DFAFLPFGGG RKCVGDQFA+MEATVTLA++L++ D  + G PE  GMVTGATIHT NGL M
Sbjct:    3 GFDWQLERARRALEG--PAFSPFRMDFWRPVEDESEIGVVTLWDTMYILLMNVAQKFGWESVDGAPVAEVGSFKGSFFTFLQKVASGRLEDLAGGPLFLLLEKYFHKYGPVYKLAFGPRSFIVVSDPVMAKHLLKSNVGAYDKGVLASILEPIMGKGLIPADPQTWKVRRRAIVPGFHKRWLNRMMRLFAECNEALLDQVGHAADEGRTLDMEEKFCSVSLDIIGRAVFNYDFGSTNKESP---AVYRVLREAEHRSSSFIPYWKLPFATQLLASQVEFSADMRLLNDVLDELISKAVATQQVADVEELESRDLDVAEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAVLTWTLFNLAQNPELTARVQAEIDAVLGPD--RLPEFDDLAPLQLTRLALVEALRLYPEPPVLIRRALREDALPPGGTGTPIRLPRGSDVFISTWNLHRSPALWDAPQEYNPERFMRPHSNPAVTGWNGYDPKVGLAGLYPNEIASDFAFLPFGGGQRKCVGDQFALMEATVTLALLLRRFDLSLAGPPEATGMVTGATIHTANGLMM 559          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: A0A835YS73_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS73_9STRA)

HSP 1 Score: 743 bits (1917), Expect = 4.690e-251
Identity = 385/582 (66.15%), Postives = 438/582 (75.26%), Query Frame = 1
Query:  646 WEGHEYGFDWYLEQARRGM---SSGKA----GFAPLRMDFWRPTEAVEEL------SAWDTLYIILRNLGQMV-GLPSVDNAPVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGGSGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMG-GGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMT 2346
            WEG +YGFDW LE+ARR M   S  KA    GFAP RM  W+P    +E       SAWD+LYII  N+ Q   G PS+D APVA +  +TGSW TFLQKV++GRLEDLAGGPLFL+LEKY    GPVYKLAFGPRSFIV+SDPV AKH+LK+    YDKG+LATILEPIMGKGLIPADP TWKVRRRAIVPGFHK WLNRM+RLFAEC + L+ E   AA  G VLDMEEKFCS+SLDIIGRAVFN+DFGS + ESPVIKAVYRVLREAEHRS+SFIPYWKLPFA++ + SQ EF  D+ LLN+VLD+LI KA +TQE AD+ ELE RDLD  +D SLLRFLIDMRGEDTTSKQLRDDLMTML+AGHETTAA+LTWTLFNL Q+    A++ EEI   +GP  +  P+FDD+P L  TRL L EALRL P                    S PV+LV+G DVFISTWNLHRS ALW  P KY PERFL    N  V GW GF PR+G  GLYPSE+ +DFAFLPFGGG RKCVGDQFA+MEATVTLA++L   D  + G P +  MVTGATIHT +GL+MT
Sbjct:   69 WEGQKYGFDWQLERARRAMVDSSHSKAPPRQGFAPFRMTPWQPAPPEQEPDILPPPSAWDSLYIIASNVAQKYFGAPSLDGAPVASVGTFTGSWSTFLQKVASGRLEDLAGGPLFLLLEKYPHQYGPVYKLAFGPRSFIVISDPVAAKHILKTNAVAYDKGMLATILEPIMGKGLIPADPQTWKVRRRAIVPGFHKRWLNRMVRLFAECNEALLDEVGRAADEGRVLDMEEKFCSVSLDIIGRAVFNYDFGSTTNESPVIKAVYRVLREAEHRSASFIPYWKLPFASRLLPSQAEFKHDLKLLNDVLDELIAKAAETQEVADIAELEGRDLDKADDSSLLRFLIDMRGEDTTSKQLRDDLMTMLVAGHETTAAVLTWTLFNLAQDAARAARVREEIATVLGPRRA--PSFDDIPKLKLTRLGLAEALRLSP--------------------SRPVRLVRGADVFISTWNLHRSPALWQEPAKYDPERFLRPHSNPGVTGWAGFDPRVGLAGLYPSEIASDFAFLPFGGGQRKCVGDQFALMEATVTLALLLHDFDLALAGAPRETRMVTGATIHTADGLRMT 628          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: I2CNY8_NANGC (Cytochrome P450 enzyme n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CNY8_NANGC)

HSP 1 Score: 677 bits (1747), Expect = 5.430e-227
Identity = 357/616 (57.95%), Postives = 444/616 (72.08%), Query Frame = 1
Query:  736 MDFWRPTEAVEELSA-----------WDTLYIILRNLGQMV-GLPSVDNAPVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELER-RDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGGS--GPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTSLRGPSPAKEVNGHGAASGHSAINGASLDVAAAKAKAVSRAATQAVGEQMPKSNIESAVPIAH 2538
            MD+WRP  + +   A           +D+  I L N  Q+V G   +D APVA + KY GSW  FL KV +G+LE+LAGGPLFL+L KY+   GPVYKL FGPRSF+VVSDPVM KHVLK+    YDKGVLA ILEPIMGKGLIPAD  TWK RRRAIVPGFH  WLNRM+RLF+ECA  L+ + +       V+DME  FCS+SLDIIG+AVFN+DFGSV+ ESPVIK+VY  LREAEHRS SF+PYWKLPFA+K +  QVEF  ++ LLN VL+KLI +A+ + E ADVEEL   RD +  ED SLLRFL+DMRGE++TS QLRDDLMTMLIAGHET+AA+LTWTLF LV++P  LAK+ +E+D  +G DG+  PT+DD+ +LL+TRLAL+EALRLYPEPP++IRRAL+E  LP+GG    G V+L+KGTDVFISTW+LHRS+ LW+ P +Y P+R+L   +N  V GW G+ P    GLYP+EV  DF+FLPFGGG RKC+GDQFA+ME  V +AM+L++ DF + GT E+VGM TGATIHT+ GL+MT S R P    + + H + S H  +        A  A  V       VGE++ +   E   P+AH
Sbjct:    1 MDYWRPAPSEDGRRAGRLAGGSGVGWFDSCKIFLSNAYQLVTGSKGLDGAPVADVGKYNGSWTNFLAKVMSGQLEELAGGPLFLLLAKYYKKHGPVYKLMFGPRSFMVVSDPVMVKHVLKTHAYKYDKGVLAEILEPIMGKGLIPADQITWKSRRRAIVPGFHSKWLNRMVRLFSECAQVLVDKLDEEEARASVVDMETLFCSVSLDIIGKAVFNYDFGSVTSESPVIKSVYSTLREAEHRSMSFVPYWKLPFADKLLKDQVEFKANMKLLNAVLNKLIAQAVASAEKADVEELTYGRDYEATEDASLLRFLVDMRGENSTSLQLRDDLMTMLIAGHETSAAVLTWTLFELVRHPAALAKVRDEVDRVLG-DGT--PTYDDVKNLLHTRLALVEALRLYPEPPILIRRALEEDSLPEGGSGLEGGVRLLKGTDVFISTWSLHRSETLWEAPDEYRPDRWLRPTQNPGVKGWGGYEPSHMSGLYPNEVATDFSFLPFGGGARKCIGDQFAIMETAVIMAMLLQRFDFTLHGTVEEVGMRTGATIHTEGGLRMTVSRRQP----DRHSHESTSLHPVLATRLSPGGATAASTVGLGLE--VGEKVLRKQSEGGCPVAH 607          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: A0A7S4QC96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QC96_9STRA)

HSP 1 Score: 659 bits (1699), Expect = 1.240e-217
Identity = 341/601 (56.74%), Postives = 432/601 (71.88%), Query Frame = 1
Query:  637 VGTWE---GHEYGFDWYLEQARR---GMSSGKAGF---APLRMDFW-------------RPTEAVEELSAWDTLYIILRNL------GQMVGLPSVDNAPVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLK-SGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGG--SGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKM 2343
            + +WE     + GFDW +E+ RR   G+     G     P   DF                 EA + ++  D   +   N+      G  +GL +V   P A I+KY GS+L+F+  V  G L+ LAGGPLFL+L KY+   GP++ L+FGP+SF++VSDPVMA+H+++ S V DY KG+LA ILEPIMG+GLIPADPATWKVRRRA+VPGFHK WLN M+ LF +C D L+ E E   R+ + LDMEEKFCS++LDIIG+AVFN+DFGSV++ESP++KAVYRVLREAEHRSSSFIPYW LP+A+KW+  QVEF RD+ +L+++L  LI +A+ T+  A VEELE RD    EDPSLLRFL+DMRGED TS  LRDDLMTMLIAGHETTAAMLTWTLF L + +P  L ++ +E+ + M   G   P++DDL  +   R  LIEALRLYPEPPV+IRRA KE  LP GG   SG +K+++GTD+FISTWNLHRS  LW+ P K+ P R+  +FRN  V GW+GF P +  GLYP+E  ADFAFLPFGGG RKC+GDQFAM+EATVT++M++ K DF++VG+P+DVGM TGATIHT NGL M
Sbjct:  117 ISSWELDPSKQKGFDWEIEKLRRSFAGLKQAPDGSWVRQPSIFDFLVQRGRVSSVGNTQSMDEAPKPVNMADVAILFATNILSSIGFGPALGLSAV---PDAVIQKYEGSFLSFISGVLGGDLQTLAGGPLFLLLSKYYQVHGPIFNLSFGPKSFLIVSDPVMARHIIRESNVDDYCKGILAEILEPIMGQGLIPADPATWKVRRRALVPGFHKRWLNTMVNLFGDCGDRLVAELETNERTRKPLDMEEKFCSVTLDIIGKAVFNYDFGSVTKESPIVKAVYRVLREAEHRSSSFIPYWNLPYADKWMGGQVEFRRDMTMLDDILADLINRAVATRSEATVEELEERD--NQEDPSLLRFLVDMRGEDITSNVLRDDLMTMLIAGHETTAAMLTWTLFELAKGDPGLLREVQDEVRSIM--KGKDRPSYDDLEAMKKLRYCLIEALRLYPEPPVLIRRARKEDTLPAGGSGLSGGIKVLRGTDIFISTWNLHRSPDLWEDPEKFDPTRWERQFRNPGVKGWQGFNPDLTNGLYPNERAADFAFLPFGGGKRKCIGDQFAMLEATVTMSMLINKFDFELVGSPDDVGMKTGATIHTMNGLNM 710          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: A0A7S2MJD4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MJD4_9STRA)

HSP 1 Score: 655 bits (1690), Expect = 7.080e-216
Identity = 347/615 (56.42%), Postives = 435/615 (70.73%), Query Frame = 1
Query:  595 LDTSAVLDDLARGEVGTWE---GHEYGFDWYLEQARR---GMSSGKAGF---APLRMDFWRPT-------------EAVEELSAWDTLYIILRNLGQMVGL-PSVDNA--PVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLK-SGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGG--SGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTS 2352
            LD+S    +L    + +W+     + GFDW +E+ RR   G+     G     P   DF                 EA + ++  D + +   N+   +G  P++  A  P A I+KY GS+L+F+  V  G L+ LAGGPLFL+L KY+   GP++ L+FGP+SF+VVSDPVMA+H+++ S V  Y KG+LA ILEPIMGKGLIPADPATWKVRRRA+VPGFHK WLN M+ LF +C D L+ E E   +S + LDMEEKFCS++LDIIG+AVFN+DFGSV++ESP++KAVYRVLREAEHRSSSFIPYW LP+A+KW+  QVEF RD+ +L+++L  LI KA+ T+  A +EELE RD   +EDPSLLRFL DMRGED +SK LRDDLMTMLIAGHETTAAMLTWTLF L + +P  L ++ EE+   M   G   P +DD+  +   R  LIEALRLYPEPPV+IRRA  E  LP GG   SG +K+ +GTD+FISTWNLHRS  LW+ P KY P R+  +FRN  V GW G+ P M  GLYP+E  ADFAFLPFGGG RKC+GDQFAM+EATVTL+M+L K DF++VG+P+DVGM TGATIHT NGL M  S
Sbjct:  102 LDSSTYEAEL----LSSWDIDPSKQKGFDWEIEKLRRSFAGLKQNPDGSWVRQPSFFDFLVQKGRVSTVGNAQSIDEAPKPVNLADVMLLFATNILSSLGFGPALGMAAVPDAVIQKYEGSFLSFIVGVLGGDLQTLAGGPLFLLLSKYYQVHGPIFNLSFGPKSFLVVSDPVMARHIIRDSPVDQYCKGILAEILEPIMGKGLIPADPATWKVRRRALVPGFHKRWLNNMVNLFGDCGDRLVSELETNVKSQKPLDMEEKFCSVTLDIIGKAVFNYDFGSVTKESPIVKAVYRVLREAEHRSSSFIPYWNLPYADKWMGGQVEFRRDMTMLDDILADLINKAVTTRSEATIEELEERD--NLEDPSLLRFLADMRGEDLSSKVLRDDLMTMLIAGHETTAAMLTWTLFELAKGDPGLLREVQEEVRTVM--KGKDRPDYDDIEAMKKLRFCLIEALRLYPEPPVLIRRARTEDTLPAGGSGLSGGIKVFRGTDIFISTWNLHRSPELWEDPEKYDPTRWERKFRNPGVKGWSGYDPDMMNGLYPNERAADFAFLPFGGGKRKCIGDQFAMLEATVTLSMILSKFDFELVGSPDDVGMKTGATIHTMNGLNMIVS 708          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: B8C8C0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8C0_THAPS)

HSP 1 Score: 634 bits (1635), Expect = 2.160e-208
Identity = 348/669 (52.02%), Postives = 455/669 (68.01%), Query Frame = 1
Query:  520 NSTPTRA-------TRLPDQVTAVGTVIEDDKLDTSAVLD--DLARGE---VGTWEGH---EYGFDWYLEQARRGMSS------GKAGFAPLRMDFW---RPTEAV-------------EELSAWDTLYIILRNLGQMVGL-PSVDNA--PVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLK-SGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAK-IHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGG--SGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTP--RMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTSLRGP-SPAKEVN 2385
            ++TP+RA       T L  ++ +   ++   K+ T A +D  DL+  E   +  W+     + GFDW +E+ RR  +       G+    P   DF     P+  V             + ++  D   +I +NL   +G  PS+  A  P A I+KY GS+ +F++ V  G L+ LAGGPLFL+L KY+   GP++ L+FGP+SF+V+SDPVMA+H+L+ S    Y KG+LA ILEPIMG GLIPADP  WKVRRRA+VPGFHK WLN M+ LF +C + L+ + +A A +   +DMEE+FCS++LDIIG+AVFN+DFGSV++ESP++KAVYRVLREAEHRSSSFIPYW LP+A+KW+  QVEF +D+G+L+++L KLI +A++T++ A VEELE RD+   +DPSLLRFL DMRGED TSK LRDDLMTMLIAGHETTAAMLTWT+F LV N   L K I  E+   MG      P +DD+  +   R ALIEALRLYPEPPV+IRRA  E  LP GG   SG VK+++GTD+FISTWNLHR+   W+ P KY P R+   F+N  V GW G+ P  +    LYP+E+ AD+AFLPFG G RKC+GDQFAM+EA+VTLAM++ K DF +VG+P+DVGM TGATIHT NGL +  S R   +P  E N
Sbjct:   28 SATPSRASITKAYSTHLDKEIKSKTPLVNPSKIYTQADIDTLDLSSYENELLAAWDTDSSLQRGFDWEIEKLRRNFAGLRQREDGQWVRKPSLFDFLVTNTPSNVVGVSNTGERYESPPKPVNMLDVGLLITKNLLNTLGFGPSLGMAAVPDAVIQKYEGSFFSFIKGVLGGDLQTLAGGPLFLLLAKYYQDYGPIFNLSFGPKSFLVISDPVMARHILRDSSPEQYCKGMLAEILEPIMGDGLIPADPKIWKVRRRAVVPGFHKKWLNNMVTLFGDCGERLVNDLDARATAKTPVDMEERFCSVTLDIIGKAVFNYDFGSVTKESPIVKAVYRVLREAEHRSSSFIPYWDLPYADKWMGGQVEFRKDMGMLDDILTKLINRAIETRDEASVEELEDRDVG--DDPSLLRFLADMRGEDLTSKVLRDDLMTMLIAGHETTAAMLTWTVFGLVSNDSGLMKEIQAEVRTVMGDKLR--PDYDDIAKMKKMRYALIEALRLYPEPPVLIRRARSEDNLPAGGSGLSGGVKVLRGTDIFISTWNLHRAPEYWENPEKYDPTRWERRFKNPGVKGWNGYDPEKQSESSLYPNEITADYAFLPFGAGKRKCIGDQFAMLEASVTLAMIINKFDFTLVGSPKDVGMKTGATIHTMNGLNLVVSRRSEDNPIPETN 692          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: A0A7S3PU02_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PU02_9STRA)

HSP 1 Score: 633 bits (1632), Expect = 1.130e-207
Identity = 335/610 (54.92%), Postives = 420/610 (68.85%), Query Frame = 1
Query:  637 VGTW-EGHEYGFDWYLEQARRGMSS------GKAGFAPLRMDFW-----------RPT-EAVEELSAWDTLYIILRNLGQMVGLPS---VDNAPVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLK-SGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGGS--GPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTSLRGPSPAKEVNG 2388
            + +W EG + GFDW +E+ RR +S       G     P   DF            RP  E  + +   D +Y+ L N  + VG      +   P   I+KY GS+ +F++    G L+ LAGGPLFL+L KY+   GP++ L+FGP+SF+V++DPVMA+H+L+ S    Y KG+LA ILEPIMG+GLIPADP TWKVRRRAIVPGFH+ WLNRM+ LF +C D LI +    ++    +DMEE+FCS++LDIIG++VFN+DFGS ++ESPV+KAVYRVLREAEHRSSSFIPYW LP+A+KW+  QVEF RD+ +L+++L  LI +A++T++ A VEELE RD     DPSLLRFL DMRGED TSK LRDDLMTMLIAGHETTAAMLTWTLF L Q +P  + +I  E+   +  DG   P +DD+  +   R +LIEALRLYPEPP++IRRA     LP GG S    VK+++GTD+FISTWNLHRS  LWD P K+ P R+   F+N  V GW G+ P    GLYP+E+  D AFLPFGGG RKCVGDQFAMMEATVT++M+L K DF   G PEDVGM TGATIHT NGL M    R  S   E NG
Sbjct:  129 LNSWDEGRQNGFDWEIEKMRRTVSGLQQNADGSWARRPSIFDFLVSKSEFSTATARPLDEPPKPVEITDVMYLFLTNTLRQVGFGDALGLAKVPDVVIQKYEGSFFSFIKGALGGDLQTLAGGPLFLLLAKYYQEYGPIFNLSFGPKSFLVINDPVMARHILRESSPEQYCKGMLAEILEPIMGEGLIPADPKTWKVRRRAIVPGFHRRWLNRMIVLFGDCGDRLIDDLAVRSKKKTAVDMEERFCSVTLDIIGKSVFNYDFGSTTKESPVVKAVYRVLREAEHRSSSFIPYWNLPYADKWMGGQVEFRRDMTMLDDILANLINRAVETRKEATVEELEERD--NASDPSLLRFLADMRGEDLTSKVLRDDLMTMLIAGHETTAAMLTWTLFELSQADPGMMKEIQAEVRTVL--DGKDRPDYDDIVAMKKLRYSLIEALRLYPEPPILIRRARTADSLPPGGSSLRDGVKVLRGTDIFISTWNLHRSPELWDNPEKFDPTRWERPFKNPSVTGWNGYNPEKVTGLYPNEIATDCAFLPFGGGQRKCVGDQFAMMEATVTMSMLLNKYDFDFSGKPEDVGMKTGATIHTVNGLNMYP--RESSGVPETNG 732          
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Match: A0A7S4HZ02_9STRA (Hypothetical protein n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HZ02_9STRA)

HSP 1 Score: 633 bits (1633), Expect = 5.460e-207
Identity = 341/604 (56.46%), Postives = 434/604 (71.85%), Query Frame = 1
Query:  622 LARGEVGTWEGHEYGFDWYLEQARRGMSSGKAGFAPLRMDFWRPTEAVEELSAWDTLYIILRNLGQMVGL-PSVDNA--PVAKIEKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSGVGD-YDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHKAWLNRMMRLFAECADTLI----VEAEAAARSGEVLDMEEKFCSLSLDIIGRAVFNFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPEYLAKIHEEIDACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETELPKGGGS--GPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNEDVDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTSLRGPSPAKEVNGHGAA 2400
            L R + GTW   +  FD+ + +AR         F  +  D    T A + +   DT Y+   N+   +G  P+   A  P A I+KY GS+ +F++ V  G L+ LAGGPLFL+L KY+   GP++ L+FGP+SF+VVSDPVMA+ +L+    + Y KG+LA ILEPIMGKGLIPADP TWKVRRRAIVPGFHK WLNRM+ LFA+C D L+    V +  AA  G  +DMEE+FCS++LDIIGRAVFN+DFGSV++ESP++K+VYRVLREAEHRSSSFIPYW LP+A+KW+  QVEF RD+ +L+++L  LI +A+ T+  A VEELE R+ D  +DPSLLRFL+DMRGED +S  LRDDLMTMLIAGHETTAAMLTWTLF L + +P  LA++  E+ A +  +G   P +DDL  +   R +LIEALRLYPEPPV+IRRA +E  LP GG      +KL++GTD+FISTWNLHRS  LW+   K+ P R+  +F N  V+GW G+ P    GLYP+EV +DFAFLPFGGG RKCVGDQFAMMEATVT+AM+LK  DF+ VG+P+DVGM TGATIHT NGL M   ++ PS + + +G  AA
Sbjct:  187 LRRKDDGTWVRRDSVFDFLVNRAR---------FTNVGSDSSLDT-APKPVGVVDTAYLFAVNVLTQLGFGPNFGMAAVPDAVIQKYEGSFFSFIRGVLGGDLQTLAGGPLFLLLAKYYQDYGPIFNLSFGPKSFLVVSDPVMARKILRESTPEQYCKGMLAEILEPIMGKGLIPADPKTWKVRRRAIVPGFHKKWLNRMVTLFADCGDRLVDDLSVRSSTAAPRG--VDMEERFCSVTLDIIGRAVFNYDFGSVNKESPIVKSVYRVLREAEHRSSSFIPYWNLPYADKWMGGQVEFRRDMTMLDDILAGLINRAVGTRREATVEELEEREND--DDPSLLRFLVDMRGEDLSSTVLRDDLMTMLIAGHETTAAMLTWTLFELARGDPGMLAEVQSEVRAVL--NGKSRPDYDDLVSMPKLRYSLIEALRLYPEPPVLIRRAREEDTLPPGGSGLKNGIKLLRGTDIFISTWNLHRSPELWENAEKFDPTRWERKFVNFGVEGWGGYDPDRQNGLYPNEVASDFAFLPFGGGKRKCVGDQFAMMEATVTMAMVLKNFDFEFVGSPDDVGMKTGATIHTMNGLNMK--IKKPSSSSDEDGGKAA 772          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig165.93.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K058_9PHAE0.000e+078.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G594_ECTSI0.000e+083.16Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835ZEV7_9STRA1.740e-27470.92Cytochrome P450 n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A835YS73_9STRA4.690e-25166.15Cytochrome P450 n=1 Tax=Tribonema minus TaxID=3033... [more]
I2CNY8_NANGC5.430e-22757.95Cytochrome P450 enzyme n=1 Tax=Nannochloropsis gad... [more]
A0A7S4QC96_9STRA1.240e-21756.74Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2MJD4_9STRA7.080e-21656.42Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8C8C0_THAPS2.160e-20852.02Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3PU02_9STRA1.130e-20754.92Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4HZ02_9STRA5.460e-20756.46Hypothetical protein n=4 Tax=Odontella aurita TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig165contigP-littoralis_Contig165:417732..427534 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G594
PFAMsp450
Model size4052
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
Exons5
Evalue0.0
EggNOG OGsCOG2124@1|root,KOG0157@2759|Eukaryota
Ec32 ortholog descriptionCytochrome P450
Ec32 orthologEc-14_006690.1
Descriptioniron ion binding
Cds size2319
COG categoryQ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig165.93.1prot_P-littoralis_Contig165.93.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig165 419174..426756 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789800.5639188-UTR-P-littoralis_Contig165:417731..4191731680789800.5639188-UTR-P-littoralis_Contig165:417731..419173Pylaiella littoralis U1_48UTRP-littoralis_Contig165 417732..419173 -
1680789800.6210804-UTR-P-littoralis_Contig165:426756..4268641680789800.6210804-UTR-P-littoralis_Contig165:426756..426864Pylaiella littoralis U1_48UTRP-littoralis_Contig165 426757..426864 -
1680789800.6325555-UTR-P-littoralis_Contig165:427351..4275341680789800.6325555-UTR-P-littoralis_Contig165:427351..427534Pylaiella littoralis U1_48UTRP-littoralis_Contig165 427352..427534 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789800.5777657-CDS-P-littoralis_Contig165:419173..4203341680789800.5777657-CDS-P-littoralis_Contig165:419173..420334Pylaiella littoralis U1_48CDSP-littoralis_Contig165 419174..420334 -
1680789800.5898967-CDS-P-littoralis_Contig165:421420..4217711680789800.5898967-CDS-P-littoralis_Contig165:421420..421771Pylaiella littoralis U1_48CDSP-littoralis_Contig165 421421..421771 -
1680789800.603088-CDS-P-littoralis_Contig165:422295..4224141680789800.603088-CDS-P-littoralis_Contig165:422295..422414Pylaiella littoralis U1_48CDSP-littoralis_Contig165 422296..422414 -
1680789800.6118598-CDS-P-littoralis_Contig165:426068..4267561680789800.6118598-CDS-P-littoralis_Contig165:426068..426756Pylaiella littoralis U1_48CDSP-littoralis_Contig165 426069..426756 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig165.93.1

>prot_P-littoralis_Contig165.93.1 ID=prot_P-littoralis_Contig165.93.1|Name=mRNA_P-littoralis_Contig165.93.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=773bp
MRRPRVTESAMPTRTATATQGRAPRQLTPAVRGKRRHLLASLAAGSILLT
RCAVAFHGHVPHAARAAERRTRRGTRNSTPTRATRLPDQVTAVGTVIEDD
KLDTSAVLDDLARGEVGTWEGHEYGFDWYLEQARRGMSSGKAGFAPLRMD
FWRPTEAVEELSAWDTLYIILRNLGQMVGLPSVDNAPVAKIEKYTGSWLT
FLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVM
AKHVLKSGVGDYDKGVLATILEPIMGKGLIPADPATWKVRRRAIVPGFHK
AWLNRMMRLFAECADTLIVEAEAAARSGEVLDMEEKFCSLSLDIIGRAVF
NFDFGSVSEESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEF
ARDIGLLNEVLDKLILKALDTQETADVEELERRDLDTMEDPSLLRFLIDM
RGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKIHEEI
DACMGPDGSHIPTFDDLPDLLYTRLALIEALRLYPEPPVIIRRALKETEL
PKGGGSGPVKLVKGTDVFISTWNLHRSKALWDRPTKYMPERFLSEFRNED
VDGWKGFTPRMGGGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTL
AMMLKKLDFKMVGTPEDVGMVTGATIHTKNGLKMTTSLRGPSPAKEVNGH
GAASGHSAINGASLDVAAAKAKAVSRAATQAVGEQMPKSNIESAVPIAHA
NHGKGKCPMHVGGAAANERGLA*
back to top

mRNA from alignment at P-littoralis_Contig165:417732..427534-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig165.93.1 ID=mRNA_P-littoralis_Contig165.93.1|Name=mRNA_P-littoralis_Contig165.93.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9803bp|location=Sequence derived from alignment at P-littoralis_Contig165:417732..427534- (Pylaiella littoralis U1_48)
TCCGTTGTGCTACCCGCCTATAATACATGAACAGCAGTATTGTAGGCCCT CTGTTATTTCAAGCCGTTTCGAGCAGACAGGACAATCGGGTTGTACGAAT AGATCAGACGGGAGGATTCTTTGCTGTGGAGTGGAAACCTGGTGCCGTGC TCTTCGGCTGGGTCGAGCGTGGATGGGAAAAAGGTGAAAAATGTGGTCGG GAGACAGGAAGACGCCTCTACATGAGAGTCAAGAGGCAGAGTGAGCCTAA CACCGCTTGTAGTTCAGCGCGTCTGTTTTACAAAAACCTCCGTGCTGTGC CGTATTTTCTCTGTAGACGCGTGCCTCCAGCGAGAGCTCTCGCGCTGTGG ATGTTTTTACGTGCTGGTGTACAAGCACTCCATCCGGTAAACCAATACGT GTTGTATGCGGTGGTGCTCTCGAACATGAGCATTTTGAAACCGGGATGAT TCAGAGTTAACTCTGAAACACAGCAGCAGCAGCTAGCAGCTCTGTCAGGA AATACAACTGCGTGTGTCCTTTGTACCAGGTAGGTTGTTTTTTTGAACAA CTCCGTCATGGTGCTGGTTCCCATACAGCAGCTCACGTACCCCACCAACG ATGTCTGAGCGGGTTGAAACGATCTGACACGATCAACCCTGTCCCCGTCT TGCTGTCTGTACCAAAACAGGCAGGCTAGGACACCCTTTATAAATCCGTC TGAGACCGAGGTGAGCTGCTAGAGGTGCCGCTCTCTAACGGTGTCCGAAA TAACACATCCGAGGTCGAGGTCGTCCCAATGCGAAGACCACGCGTGACAG AGAGCGCGATGCCCACTCGAACAGCTACTGCTACCCAAGGAAGAGCTCCG AGACAGCTCACGCCTGCAGTCCGTGGTAAGCGCAGGCACCTGTTAGCATC GCTTGCTGCCGGAAGCATCCTGCTGACAAGGTGTGCGGTAGCTTTTCACG GGCACGTGCCTCATGCTGCTAGGGCGGCGGAACGGCGCACGCGGAGAGGC ACCCGCAACAGCACCCCCACGCGCGCCACGAGACTACCCGACCAGGTGAC CGCCGTGGGCACGGTGATAGAGGACGACAAGCTAGATACCAGCGCGGTTC TAGATGACCTCGCCCGCGGGGAGGTGGGGACTTGGGAGGGCCACGAGTAC GGGTTTGACTGGTACTTGGAGCAGGCTCGGCGAGGCATGTCCTCTGGGAA AGCTGGTTTCGCGCCGCTGCGCATGGATTTCTGGAGGCCGACGGAGGCCG TGGAGGAACTGAGCGCTTGGGACACGTTGTATATTATCCTGCGGAACCTG GGGCAGATGGTGGGGTTGCCCTCGGTGGACAACGCTCCTGTCGCGAAGAT CGAGAAATATACCGGGAGTTGGTTGACGTTCCTCCAAAAGGTATCCAACG GACGTCTCGAGGACCTCGCGGGAGGGCCGCTGTTCCTGATGCTTGAGAAG TACTTCTTGGCCGAAGGTGAGCCTGAGAGACGGGCAGCCGCACGATCATA CAGAGAGGCTAGCCCAAGGCCGGCTGTGCTCTTTGTACGTGAGCAAGATT CGTTGTCATCGCTGTGTATGTGGGGGGGTGTTTGCGATCCTCGGGCGCTT TGGAGACGGCATGTCTTACAATTGAACACCTCTTAACATGAAATGCCGAA GTGACTTGCTGTAGAGTACTCGTGTCTCATATCATAGAGTTTCTAATGGG ATGATTTCTTCTTATTTTTTTCTCTCAGCGATGATTTGGATTTTGGCCTC CTCTTGAGCTCCCTGAAAGCAGCACCCGATGCGATCGACCTCAGGTATTA TCTCATTGCAGATGATACCACCGCATTAGTTGTGATACGCTCTGCTATCA GTTGGGTTTTGGTTAACAGACCTCAAGTTGATTATGGACTCGAATCGACA CACCCAACTCTTCACCTGTCTCCATGCAACGTACTCGAACGTCAGTGTTC TCAACATGTACATACTCCTTAAGACATCTGTGGACCCGGTATCATTTACG TCGAAGTACATCAGCATATACCTTGCTCGTGTTACTGCTCAGCGACCTTA CAGCAGTAGTACATGTAGCCGTGTACATCCAGCAGATTGGTTGCATTCGT CCATCTTACACTCACGAGACCCAGCAGACCCGTGCATTATTTACGTAGGT CGTACACCGACCGGCCGCGCTGCAGCTGAGGCGGCTGCGTTCTGCAGTCG AAGTGATCGGAATATTAATATCAAGATTGGAAGACGGATGTCACTTTGAA AGAATGTACCGGTACTCGATGGAGGCTCAGCAACTACAGCAGTGTCGTAT TTTCTTATAATTCCGCCGTTCGGCACTCGTCCAATGTTGTTGTTGATTCT CACATTAGCTCATCGCCAAAATCTAGCCCATGGTCACAAAAAGTGGTGAG CCCTAGGAAGATCCAAAAAACAGAAAGAAACTACAAGGGAATACCCAAGA AAGATCGAAGAAGATACACCTTCCTACGAGGTGTGCATCACTGAACTACA GCAGTCACACCAGTACCAACATCAAACGTACTTCCAGCGTCGTTCATTTG ACTACAACATCGTGTTCAGTCTCCTCCCGCCCCACTTTTAACTAATAACC TGCTGTTACAAGCAATCAGTAGGTAGCTGCAGACTACAGCAGTTAGTTGC TGTCTGGAGTGCTGCCTGCAACGTACAAGTAGCCCCGGCAATTGGAAAAG ACAGAAAAAGAAAAAACACAAAAACACACACGTATCATCAGATGTTGTCG AGGATGGTGTCTCCATGCCGTCCTTGCGACGCTGGTGATGATGTCGTCCT AAACATGTCCTCCTTGTCTGGGTCCATGTCGCTGTTGGCGTTGCCCAAGG CCACATCACCAGCACCATGCTCTCGTAACGCTTCTTCACTGCCGGCGTTG CCTTAGGTCACCTCCATCACCGCCGCTCTCTCACATAACAGCTCTTTCTT GTTGTTCCTTTCAGATCAGTTCCCGAAAAAACTCCACTGCTGTGCACTTG AGGTACAAGTCTTCTGAAAAACAAGTTCACGCTCGGAGTGAGATCGACCA AGCTCTTCCCCGTTCGTCGCTGCTCGTCTACCTCCGTCCTTGGCTGCGAA ACTGGTTACTGGACGGCACAATCCCTCTGCGCATCCTAGATCGTACCTTC TTTTCACCTATGGTGTCGCCTGCCTCCGCACACAAATGCTTGTGATGTAC ATTGCTGTACTGCCGCTGTAACCAAAAGGCCAGCGAATCCGCACATTTGC ACCTGGCACACCAACTGCGACCCAACTCTACCGCCCAACTCTACCGCCAC GCCCGTGGCGTTCGACCACAGCGCAGCAGCAAGAAGGTATCACTCCTTGA GGGTGAGTCCGGCCTTACACCCGCCAGAAAGACCCCCCCAACTCGCTTTG GGTCATGCTTACAGCAGACCTTGCCTAGGCAGCGAGGGAACGGAGAAATG TATACATGTACGAGTACCGTATCCTCTCCTCTGTGTGTTGGGCGGTTTCT TACAAGGTTGAAAAGTGGAGAATGCCGATCGATCATCCTCTATTTCTGAT CGAGTCGTATGAGATGATAGCGAACCCCCAAACGGCCACATATTTTGCTT TTGGAACACGACGCGTGACATCATTCGGTGCTCGGCCTCAGGGCACCAGT CGCGACCGAACCTTTTGGGGCGTGAGCTCCTTCTCTTCTGAGCGTGGGCA CACCGAGTGTGTTACGGGTATTTGCGGGCTCTGTGTGTCGCGACGTTTCG TTTGCGGAGTAGTCCGAGCTACAATTTTCGATCGCAATTTCCGGTCGGTG CTCCAGCAGGAATCATGGGGCAAAACGATAAGGTCGCCAACCGAAAATTG CGATCGAAAACTGTAGCTCGGACCACTCCGCCAACGAAACCTCGCGATAC ACAAGAGCCCACAACTAACACACGGTGCCCATAAGCTCATAACACAGGAG CCTACGCCCCAAACGGTTTGGTCGGGATTGGTGACCCACGGGCCGAGCAC TGATTGATGTTGTCACGTGTTGTGCTCTGAAAGCAAAGTATGTGGCCGTT TGGGGGTTCTCTGCTCGATAGGAAATGGGGGAAAATCGATCGGTTTTTTC AACCTCACAAGAAACGGACGTATCCCCCCCATCGATCGATTTTCGGTTAT TTTCCCACGCGGACATTCATCATGTATTCGCCGTTCGCCAGACGAGAATA TGGAGTAGATCATCAACGAGGACAAAGGAATATCCCATTTGCTCACGAAG ACAATTTGGTAGTGGTCTTGTAAGAAATACGTTACATCGTGTGTTGAGCA TACACAGCAGTTATGAAAGCCCTATATGCATCTCCAAAGCAGTAGAAACA AAAGTCCCAGCGCCGGAAGAAGTGGCGTTGGAAAAGCCTCGTCTGAAGTT GTCCGGAGACGTGCCGTTTGGCACTGAGTCGAAGTTCACAAAGGCCGATA ATTTACGGTTTTGTTGGTATGGCATGAACGACATGGTCATCCAATAGGAG TTACCCACTACTGGCACAGTTGTCACTGCAGATGTCGGGTTGGTTGTTTC CAGGCACGGTCGACCGTTTTGTTTCGTCGAATACGCTGCGGATCCCTTGC AGAGTAGTCCCGCACGTCGATCGTCGAACCCCTCGTCTTTTTCGCTCGCG TTTTCTCGGGCGATGCGTACCTTTGCGCACACAACAGTTGTAGGCTACAG CAGCAGTATTGCGATGTTTTTTTTGAAGCGCTCGTCCTCTAAATTTTCAA TTCTTTTATCATACCTGCCACTGAAGTGTAACACGAGGAAACCTATCCAA CATTTTTACCTCCAACGAAGCCAGCGCCGATAATTTGAATTGGCTACAGC GCTTGGAATCTCGAAAATCTTGTGTGCATCCAATCGAACCTGAAGCTGAC AAAATTTCCTTGTGTTGATGGTGTGTACGGCACCGAGCATGCTTATCATC ACGCAAAGCGCCACCGTGGATGTTAGTTACCGAGAAAACTCAGGGCGGGA CTCGTGTGCGCAGCCGATAATCCACTTCGAAGTGACATATGCCCCGCTCT TGTCCCTCTCACCCGCATGTTTTTTGCATTTGCCCTGACGACTTTTACTT CATCCTTCTCCGCTTTGAAGGGCCGGTTTACAAGTTGGCTTTTGGGCCCC GATCGTTCATCGTGGTGTCCGACCCTGTGATGGCCAAGCACGTGCTCAAG TCGGGTGTGGGGGACTACGACAAGGGTGTGCTTGCGACGGTGAGCTGCGG TGTTTTTTGTGCGTCGCAAGAGAGGGGGGGGGTCGTTAGGTACAGCGTTT ATGTTCGTGTTGAAAAAGCTGCAAGGCAGTCGGGTTGTCGGGTTGTGTGA CTGTGAGCTTATCCAACAGCAGTATCTCGTGATAGCCTGTGAGCACCTTC ACACGTGTGTGGTATGTATATAACGTTTGTCCATGTCGAGATTTCGCAGG CGTCGGTCGATACTTTTGTTTGATGCTGTTGGAAGTTCTGGCGGCTATTT TCGATAGTCGATCGATGTACCACACATCCCGCGGTTGGAAAAACGCAAAG CGGCGCAGTTCGGAAGAATTTAGGTGGTTCTGGAAGCTCCAGCGGTATAT TGCACAGCTACCCCCTTCCTCTTGAGCTCAGTAGAGAGAGGAGGTCGGGG TCTGAGAGTCAGCCAGACAGCAAGAAAAGCTACCCGTCCGCACACGTGTC GTTCTGTCGATGTCCCCGCCCAGAATTATACCACTGACTGTTTGTCACCC GCCTCTTCACCAGATCCTAGAGCCGATTATGGGGAAGGGCCTGATCCCCG CGGACCCGGCGACGTGGAAGGTTCGTCGGCGAGCCATTGTGCCGGGGTTC CACAAGGCGTGGTTGAACCGCATGATGCGGCTGTTCGCCGAGTGTGCTGA CACGCTGATAGTGGAGGCCGAGGCGGCGGCTCGATCCGGGGAGGTTCTTG ACATGGAGGAGAAGTTCTGCTCTCTGTCCCTCGACATCATCGGGCGAGCG GTGTTCAACTTCGACTTCGGCTCCGTTAGCGAGGAGTCGCCGGTGATCAA GGCCGTCTACCGCGTGCTGCGTGAGGCGGAACACCGGTCGAGTTCTTTCA TCCCTTACTGGAAGGTGAGTGAGTGGCCGATAACAGTGCGAAGTCACGGG GAGCTTTTGAAGCTGTGAGGGATTGTCTGACCGATCTGCTACTTTCTAGA AAACGACTTATTTTCCTCTGGAATCGTGATTGGCGACGAAGATTCATTTC CTCCGTTGGAGGCATTTTTCACGAACGATCGAAATCCCACACCACAGCAG CGACAGCAGTGCAGACGGTATCGTGCAACACATTTGGCAAGCAAATCCAC CCCTGCTCTGCATATTCCAGCAGGCGTGGCCAGATACTGGCACATTTGCC AAGAGAAGCAAAGAGAACGGAAGTGCAAGTGAAGGAATCGAAATCAGAAT CCTTCATCTAGCTGCCTGCCTGCCTGCTTCTTTTTTCTTGCCTCGCCCAC GCGCTCCTTTCTCGCAACCGTTTGTGGCCGGCAAGCGAGCTGCAACGAGC ACAAAGCGGCAGCAATTGCAGAGGGCCACCATCATAGCGGCCTTCGTTTC GAACGAATGAAGACTTGGGAGGTGTTTGAACTCGAACTCTGTTGAGATCA GATTTTTTTCAAGTATAATTTGTTTGATTTTCCCACGAATTTCCCACGAA TAAAAAGCACCACATCCTTCGCGACAATGAGCGGAGGGATTTACGATCCC CGTTTAGAGAACCCCAAAAGCCTATTCGGGGGCTGATTCTTGTCTACTAA CCCTAGCCTTCGTCCACCCAAAGTCGCGTGATGGCATTGATCTTGGTAGA CCTCGTATCGTGTGCGAGCGCTCGAACAATTTGAGGCTACCGGTGCTGTT GGGGTTGATATGGTGCCAGGCTCCAATTCTTCCTCTCTTTATTTTTGGTC GCTCTCTTGCTGTTGAGTTGCCAATCCAAGGCCGGCACCACCATGTGGAG GCCGTCCCTCTTCGCGAGTTATTACAATTCTCTTTTCTTTTGACTTGGCC TGTCATCTCATTTGCGTCAGCTAAGCTTGACTCTTGTGTTTTAGCACTAC TCTACAGCGGTTCTCGTTCGTTTGATGCGGTTTTTTATGTGTCTCGCATT CCTACCAATGCAACCTTTAACGCTCCCACCCCACCCCACCCCCTCGGCAG CTCCCGTTCGCGAATAAGTGGATTGCAAGCCAAGTGGAGTTTGCGCGAGA CATCGGCCTCTTGAATGAGGTGTTGGACAAGCTCATCCTTAAGGCGCTGG ACACGCAAGAGACGGCAGACGTAGAGGAGCTGGAACGGCGAGACCTCGAC ACGATGGAAGACCCGAGCTTACTCCGCTTCCTGATCGACATGCGTGGTGA GGACACGACAAGTAAGCAGCTCCGCGACGACCTCATGACGATGCTGATCG CCGGCCACGAAACCACCGCGGCCATGCTCACGTGGACGCTCTTCAACCTC GTTCAGAACCCGGAGTACCTGGCGAAGATTCACGAGGAGATCGACGCGTG CATGGGCCCGGACGGTAGTCACATACCCACGTTTGACGACCTCCCGGACC TACTCTACACGCGGCTGGCTCTCATCGAAGCCCTTCGACTGTACCCAGAG CCCCCGGTGATCATCCGGCGAGCTCTGAAGGAGACCGAGCTACCAAAGGG CGGGGGTAGTGGCCCGGTGAAACTGGTGAAAGGTACTGATGTGTTCATCT CCACGTGGAATCTCCACCGCAGCAAGGCATTGTGGGATCGCCCGACCAAG TACATGCCGGAACGATTTTTGTCGGAGTTCCGCAACGAGGACGTCGACGG ATGGAAAGGGTTCACGCCGAGGATGGGGGGCGGGTTGTATCCCAGCGAAG TTGACGCCGACTTCGCTTTCTTGCCGTTTGGTGGCGGGAATCGAAAGTGT GTGGGAGACCAGTTCGCCATGATGGAGGCTACGGTAACCTTGGCAATGAT GCTCAAGAAGTTGGACTTCAAGATGGTTGGGACGCCGGAAGACGTGGGCA TGGTCACTGGTGCTACCATTCACACCAAGAACGGCCTCAAGATGACGACC TCTTTGAGAGGTCCGTCACCGGCGAAGGAGGTGAACGGCCACGGTGCCGC TAGCGGTCACAGCGCGATCAACGGCGCTTCGTTGGACGTGGCGGCGGCGA AGGCGAAGGCAGTGTCAAGGGCTGCGACGCAAGCCGTTGGGGAGCAAATG CCGAAAAGTAACATCGAATCGGCGGTGCCCATTGCTCACGCAAATCACGG CAAAGGCAAGTGCCCAATGCACGTCGGGGGGGCGGCGGCGAACGAGAGAG GCCTTGCTTAGCACCTGTGTATCCTCTTCTCATAAGTGTGACTGATTTGC AAGGTGTATGGAAGGCGTATGGGCATGCACGCGCCTCCAAGTCGGCTCGT GCGCACTATGTGAACCTTTGCGCATACATGTCGTCTCGCATGGGTGCGTA CCATCTGTCGAGAACGAGGTACCTTTGTTAGGGGACGGGGCTGATTTGAT CTCTTTTTCTTGATTCCCTGAGCAGTTTTTGGGAAATGGAGAAACCCACG AAACAGGTGCCACGGTAGCAGACGTGCCACACCTCATTTTTCACGCAAAG GCACTGTTCCCTCGTAGTCTTGTGGGATTTTGCCGGGGATGCCAAATTAG TTTTATGTTGTGGGGGTTTGAAATCCCAAAGTGTAAATTACGGCCTTCAG ATACCATACATCAGGAAGAACCCGCAGACTTGACGACCATGTATTTGCCC GACTGCTGTGGTCGTCGCGATTTGTGTTGTGTAATGTTGTTTAACGTCGT TGCGGGTTCTCTCTCTCTGCTGCTTTCTTCAGCGGGATGGATTGGTGTAT GCTTTGGCGTGGCCGCACGTTCATCACCTGCAACACAATAGTTGAGGGTA TTTTTTTGAAAAGAAACCCTACAGTGAACGGCTGCTGCTGCGATTCAAAG GATGGAGTTGCTCAGTTTTTTCTTTTGTTCATTCGGTGCAGACTTTTGGC CCCAGCTTTTAGGGGAACGTGTCGCCGCAGCAAAATCACAGCAAAATCAA AGTCCAAGATTTACTGTTGTTTCACTACGAATTTCCAAGTGATCGCCTCT CTCTGTGTTTTACGCGGTGTCCCAAGCTGTTGCCGTGCCATGGTGGTGTC GATCGTCTCACCTCAAGGTGGGGGAAATCTTTGGTACAGTATGAAAAGGG GAAGGGACGCGTCTTGTATTGTTGACTTTTCTTGGTCTTGATCGCGATTG TATTTTGAAAGTATTTGTAGGTCCCGTCCTGTGTTCCTCGTGGTACATGT TGACAATAATTTGTGTAGGTCTTTCTGATTGGTTCTCCTCTCTGGTAAAA ATATTGAAATACGATGGATTCACGCTATGTCCATTTCACGACTGCGGGGG AAAGGAATGAATGTTGTGTTGCTTGCACCCATTCTCGAGACTAGGACACC GTCAAGCCGACTACAGTTTTGATAATTGTTGTGCTAGCTAACTGCCGGTT GACTTCACAGGACCGTCAAGAGGCCACATCCTGGATGGGTAACGGCAGGG GTGTAAATAGTATCGGCGCTTCGGCACTGCGCGTCAATGTTTCATTTTTT GTTGGGGAGGGCGTTCGCTCTAATTCGGGGGGGAAGCACCCCGCGATCGT TGTCCCACCCCCCGAATAATATCACCAATCTAGCCGCTTTTTTAGCGCGC AACCTTGCAACCTTGCGGGGGCCTCCTCAAAAATAGGTCAACACACAACT CAC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig165:417732..427534-

>mRNA_P-littoralis_Contig165.93.1 ID=mRNA_P-littoralis_Contig165.93.1|Name=mRNA_P-littoralis_Contig165.93.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2319bp|location=Sequence derived from alignment at P-littoralis_Contig165:417732..427534- (Pylaiella littoralis U1_48)
ATGCGAAGACCACGCGTGACAGAGAGCGCGATGCCCACTCGAACAGCTAC
TGCTACCCAAGGAAGAGCTCCGAGACAGCTCACGCCTGCAGTCCGTGGTA
AGCGCAGGCACCTGTTAGCATCGCTTGCTGCCGGAAGCATCCTGCTGACA
AGGTGTGCGGTAGCTTTTCACGGGCACGTGCCTCATGCTGCTAGGGCGGC
GGAACGGCGCACGCGGAGAGGCACCCGCAACAGCACCCCCACGCGCGCCA
CGAGACTACCCGACCAGGTGACCGCCGTGGGCACGGTGATAGAGGACGAC
AAGCTAGATACCAGCGCGGTTCTAGATGACCTCGCCCGCGGGGAGGTGGG
GACTTGGGAGGGCCACGAGTACGGGTTTGACTGGTACTTGGAGCAGGCTC
GGCGAGGCATGTCCTCTGGGAAAGCTGGTTTCGCGCCGCTGCGCATGGAT
TTCTGGAGGCCGACGGAGGCCGTGGAGGAACTGAGCGCTTGGGACACGTT
GTATATTATCCTGCGGAACCTGGGGCAGATGGTGGGGTTGCCCTCGGTGG
ACAACGCTCCTGTCGCGAAGATCGAGAAATATACCGGGAGTTGGTTGACG
TTCCTCCAAAAGGTATCCAACGGACGTCTCGAGGACCTCGCGGGAGGGCC
GCTGTTCCTGATGCTTGAGAAGTACTTCTTGGCCGAAGGGCCGGTTTACA
AGTTGGCTTTTGGGCCCCGATCGTTCATCGTGGTGTCCGACCCTGTGATG
GCCAAGCACGTGCTCAAGTCGGGTGTGGGGGACTACGACAAGGGTGTGCT
TGCGACGATCCTAGAGCCGATTATGGGGAAGGGCCTGATCCCCGCGGACC
CGGCGACGTGGAAGGTTCGTCGGCGAGCCATTGTGCCGGGGTTCCACAAG
GCGTGGTTGAACCGCATGATGCGGCTGTTCGCCGAGTGTGCTGACACGCT
GATAGTGGAGGCCGAGGCGGCGGCTCGATCCGGGGAGGTTCTTGACATGG
AGGAGAAGTTCTGCTCTCTGTCCCTCGACATCATCGGGCGAGCGGTGTTC
AACTTCGACTTCGGCTCCGTTAGCGAGGAGTCGCCGGTGATCAAGGCCGT
CTACCGCGTGCTGCGTGAGGCGGAACACCGGTCGAGTTCTTTCATCCCTT
ACTGGAAGCTCCCGTTCGCGAATAAGTGGATTGCAAGCCAAGTGGAGTTT
GCGCGAGACATCGGCCTCTTGAATGAGGTGTTGGACAAGCTCATCCTTAA
GGCGCTGGACACGCAAGAGACGGCAGACGTAGAGGAGCTGGAACGGCGAG
ACCTCGACACGATGGAAGACCCGAGCTTACTCCGCTTCCTGATCGACATG
CGTGGTGAGGACACGACAAGTAAGCAGCTCCGCGACGACCTCATGACGAT
GCTGATCGCCGGCCACGAAACCACCGCGGCCATGCTCACGTGGACGCTCT
TCAACCTCGTTCAGAACCCGGAGTACCTGGCGAAGATTCACGAGGAGATC
GACGCGTGCATGGGCCCGGACGGTAGTCACATACCCACGTTTGACGACCT
CCCGGACCTACTCTACACGCGGCTGGCTCTCATCGAAGCCCTTCGACTGT
ACCCAGAGCCCCCGGTGATCATCCGGCGAGCTCTGAAGGAGACCGAGCTA
CCAAAGGGCGGGGGTAGTGGCCCGGTGAAACTGGTGAAAGGTACTGATGT
GTTCATCTCCACGTGGAATCTCCACCGCAGCAAGGCATTGTGGGATCGCC
CGACCAAGTACATGCCGGAACGATTTTTGTCGGAGTTCCGCAACGAGGAC
GTCGACGGATGGAAAGGGTTCACGCCGAGGATGGGGGGCGGGTTGTATCC
CAGCGAAGTTGACGCCGACTTCGCTTTCTTGCCGTTTGGTGGCGGGAATC
GAAAGTGTGTGGGAGACCAGTTCGCCATGATGGAGGCTACGGTAACCTTG
GCAATGATGCTCAAGAAGTTGGACTTCAAGATGGTTGGGACGCCGGAAGA
CGTGGGCATGGTCACTGGTGCTACCATTCACACCAAGAACGGCCTCAAGA
TGACGACCTCTTTGAGAGGTCCGTCACCGGCGAAGGAGGTGAACGGCCAC
GGTGCCGCTAGCGGTCACAGCGCGATCAACGGCGCTTCGTTGGACGTGGC
GGCGGCGAAGGCGAAGGCAGTGTCAAGGGCTGCGACGCAAGCCGTTGGGG
AGCAAATGCCGAAAAGTAACATCGAATCGGCGGTGCCCATTGCTCACGCA
AATCACGGCAAAGGCAAGTGCCCAATGCACGTCGGGGGGGCGGCGGCGAA
CGAGAGAGGCCTTGCTTAG
back to top