mRNA_P-littoralis_Contig1631.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: A0A2D8LMF0_9FLAO (Signal peptidase I n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LMF0_9FLAO) HSP 1 Score: 266 bits (681), Expect = 2.130e-87 Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGEAIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASLKLN 680
KKGIV+VNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDAN SDSLFVFLPDASANL EAIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASLKLN
Sbjct: 93 KKGIVYVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANMASDSLFVFLPDASANLEEAIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASLKLN 227
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: A0A3L9YVZ3_9FLAO (Signal peptidase I n=1 Tax=Ulvibacter antarcticus TaxID=442714 RepID=A0A3L9YVZ3_9FLAO) HSP 1 Score: 112 bits (280), Expect = 5.260e-27 Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 3
Query: 270 RNKKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGEAIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASLKLN 680
R K +NS NVD+ L LKH Y + ++++ + PD YQ+A T DS V L D+ A + R SE + ++ + Y A WN + FGPL+IP NK+FVMGDNRDNAMDSR+IGLID+ ++ ++ N
Sbjct: 90 RIKNSTTFINSSNVDSSLNLKHAYFISEKQMNNV--MDNPD---YQEAYLTQDSYLVHLKDSIAAKNDYKRNLMKVSEPNPIVSKVYNANWNANFFGPLVIPENKIFVMGDNRDNAMDSRYIGLIDEEEIIGVVRTN 221
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: UPI0006293849 (signal peptidase I n=1 Tax=Kordia jejudonensis TaxID=1348245 RepID=UPI0006293849) HSP 1 Score: 100 bits (250), Expect = 1.640e-22 Identity = 60/134 (44.78%), Postives = 81/134 (60.45%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLY---RVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGEAIRVKSHYSEK---DAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASV 659
KKGIV+VN +NVDA L LKH Y + FD++ + P D N D+ VFL DA A A+ K +K + I+E+Y WNKD+FGPL+IP K+FV+GDNRD+A DSR IGLI+ +++
Sbjct: 96 KKGIVYVNGKNVDAQLELKHSYLLSQAQFDKLEN-----PPLDAF----NINEDTKMVFLEDAIAKK-YALENKQFIEDKGIENDFIKEKYQQNWNKDHFGPLVIPEGKIFVLGDNRDDARDSRTIGLINASAI 219
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: UPI000A202DC6 (signal peptidase I n=1 Tax=Nonlabens tegetincola TaxID=323273 RepID=UPI000A202DC6) HSP 1 Score: 98.2 bits (243), Expect = 1.530e-21 Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGEAIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASLKL 677
K G++ VN NVD +L LKH Y+ F++++ + + ++Y Y N DS+ + L + A + + + E D IQ+ Y WN+DNFGPLIIP + FV+GDNR+ +MDSRF+GL+ ++ L L
Sbjct: 91 KNGVLFVNGTNVDQNLKLKHSYKTSFNKLNEIKEKIEINEYNYYPIN--KDSIIIQLTEKEAKKFAVVN-RFYKMEIDNEIQKIYKKEWNEDNFGPLIIPKDYFFVLGDNRNYSMDSRFLGLVPTKNLKGKLIL 221
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: A0A504JBX3_9FLAO (Signal peptidase I n=1 Tax=Aquimarina algicola TaxID=2589995 RepID=A0A504JBX3_9FLAO) HSP 1 Score: 97.1 bits (240), Expect = 4.480e-21 Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSY--EHLLTPDDYMYQDANTTSDSLFVFLPDASAN---LGEAIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASL 671
K G++++N +N+D + LKH Y + DE + L+ D Y+ T D +F+FL + A L I+++ + D I ++Y WN+DNFGPL IP K FV+GDNR N+ DSR+IGLI+K +V ++
Sbjct: 91 KDGVLYLNKKNIDKSMALKHFYILDPDEFQKLLDKELIEEKDIAYR----TKDKIFIFLINKIAQKHGLSSKIQIEPK-NRTDKKIVKKYNKNWNRDNFGPLKIPEGKCFVIGDNRHNSEDSRYIGLINKLDIVGTV 222
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: A0A5B9FWQ7_9FLAO (Signal peptidase I n=2 Tax=Flavobacterium TaxID=237 RepID=A0A5B9FWQ7_9FLAO) HSP 1 Score: 96.3 bits (238), Expect = 7.890e-21 Identity = 55/137 (40.15%), Postives = 72/137 (52.55%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGEAIRVKSHYSEK-----DAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASL 671
+ G++ N N D L+H Y + +EI DY Q A + + A + + K + K D I E +G WNKDNFGP+IIP NKLFVMGDNRDNAMDSR+IGLIDK + A++
Sbjct: 86 RDGVLFRNGINFDKDYNLQHNYLIDIEEIKKLPE--NEKDYFSQKAYPALLNNKYLITSAEDRI--MYKAKFPFKRKLDSIPDKFIVETFGKNWNKDNFGPIIIPVNKLFVMGDNRDNAMDSRYIGLIDKRDIKATI 218
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: UPI00164A6676 (signal peptidase I n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI00164A6676) HSP 1 Score: 95.1 bits (235), Expect = 2.520e-20 Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPD--ASANLGEAIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASL 671
KKG + +N +N D H Y + +E + L PD DS+ + L D A AN E R ++ ++++++Q+ + WN DNFGPL IP+NK+FV+GDNRD A D+RF+G IDK+ +V ++
Sbjct: 91 KKGTLFINGKNADKGTDFVHFYVLTEEEFQKSKTGLKPDLTFISRVGENKDSIMIPLSDQYAKANGLELRRRIANEVDENSIVQKIFNENWNLDNFGPLKIPSNKVFVLGDNRDIAEDTRFVGFIDKSDIVGTV 224
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: UPI0012BBF1C5 (signal peptidase I n=1 Tax=Fulvivirga kasyanovii TaxID=396812 RepID=UPI0012BBF1C5) HSP 1 Score: 94.7 bits (234), Expect = 3.990e-20 Identity = 51/143 (35.66%), Postives = 79/143 (55.24%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGEAIRVKSHYSEKDAM-----------IQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASL 671
+ G+V VN+QN+D ++ L H+Y + D+ Y+ LL + D L +L + S+ + + + D M I+E Y WN++NFGPL IP K FV+GDNRDNA+DSR+IGLID+A ++ ++
Sbjct: 95 RSGVVFVNNQNIDENMELNHVYVIKHDK---YKQLL-------KKGELDKDGLMAYLNEDSSLVCMSTEIAKRNGLSDRMYIDPENKAEKEIKEVYQQNWNRNNFGPLEIPEGKYFVLGDNRDNALDSRYIGLIDEARIIGTV 227
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: A0A7L4ZJR1_9FLAO (Signal peptidase I n=1 Tax=Kordia antarctica TaxID=1218801 RepID=A0A7L4ZJR1_9FLAO) HSP 1 Score: 92.8 bits (229), Expect = 1.770e-19 Identity = 46/131 (35.11%), Postives = 73/131 (55.73%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGEAIRVKSHYSEK--DAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVV 662
+ ++ VN +N D H L+H Y + ++ + + L ++ + D VF+ D A + + +S+ D +I+EQY WNKD+FGPLIIP K+FV+GDNRDN+ DSR GL D +++
Sbjct: 92 RNSVLFVNGENFDKHFNLQHTYVLSQAQLDNMKQL------SLENFRISEDKFMVFIQDVDAKKYALEKYRFIHSKDKIDQVIKEQYNQNWNKDHFGPLIIPKGKIFVLGDNRDNSQDSRHTGLRDATAII 216
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Match: A0A345GUN1_9FLAO (Signal peptidase I n=1 Tax=Kordia sp. SMS9 TaxID=2282170 RepID=A0A345GUN1_9FLAO) HSP 1 Score: 91.7 bits (226), Expect = 5.810e-19 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 3
Query: 276 KKGIVHVNSQNVDAHLTLKHLYRVHFDEISSYEHLLTPDDYMYQDANTTSDSLFVFLPDASANLGE--AIRVKSHYSEKDAMIQEQYGARWNKDNFGPLIIPTNKLFVMGDNRDNAMDSRFIGLIDKASVVASL 671
+ G + +N +NVDA LKH Y + ++ +S + +T DYM N ++ D A + A R + D I+E Y WNK++FGPLIIP K+FV+GDNRD + DSR GLID+ ++ L
Sbjct: 91 RNGTLFINGKNVDATYNLKHAYILSEEKFNSLDETVTGKDYMII-PNEGKQGYLTYIEDKDAEKLQLKAYRFLDDKTNSDPKIKEIYQNDWNKNHFGPLIIPEGKIFVLGDNRDYSQDSRSYGLIDQEAITGVL 223 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1631.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1631.2.1 >prot_P-littoralis_Contig1631.2.1 ID=prot_P-littoralis_Contig1631.2.1|Name=mRNA_P-littoralis_Contig1631.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=99bp MKRTHIILLIIGVVGVIGFIYFMTVQQVAKPYIMSSTANEPTLPIGTQVMback to top mRNA from alignment at P-littoralis_Contig1631:649..1328- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1631.2.1 ID=mRNA_P-littoralis_Contig1631.2.1|Name=mRNA_P-littoralis_Contig1631.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=680bp|location=Sequence derived from alignment at P-littoralis_Contig1631:649..1328- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1631:649..1328- >mRNA_P-littoralis_Contig1631.2.1 ID=mRNA_P-littoralis_Contig1631.2.1|Name=mRNA_P-littoralis_Contig1631.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=297bp|location=Sequence derived from alignment at P-littoralis_Contig1631:649..1328- (Pylaiella littoralis U1_48)back to top |