mRNA_P-littoralis_Contig163.70.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig163.70.1
Unique NamemRNA_P-littoralis_Contig163.70.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI)

HSP 1 Score: 654 bits (1686), Expect = 1.790e-218
Identity = 318/503 (63.22%), Postives = 376/503 (74.75%), Query Frame = 1
Query:    1 HDYAPGNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVPWPTLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHRSACVSGHCLHCQRKQDHFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTATSXXXXXXXXXXXXXXXXXXDPNGGGNQTRSRNAVAEKKGSVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGALTKEYARQMVTNTRWTVASSEDLCKSWRK 1509
            HDY  GNH RS  DNS+VCV P  CK + VRYLMGT+ QLY TVM+DL QA  A +VEV  I    F + +IPFYV+EQSLRSCICVHCYKAKL+TK LC  WPTLH+G TP S C C C+LCKDG C++YLPY SS +VHSMA+FSDM +C KE+LY S+DGT  +AH++ CVSGHCL C++KQ+ FF+CP+NKG   RQ+ PA    PA      PPPGE+RWK FT VD  G AT+A                    DP GG ++ R+R AVAEK G+VD+FM EL+     F KHRR YKTQR AF E KLTI++GEVLC+VDFQERLQ+ +QDEVQSQHW + ATTIFPC IFF+ DGRVW YSFQILSDDM QDNAWVQ+VM+KLL++DIPALLR++GA   +PM R T++TDNCAKQFKCRFHF WVADA I  LDK G+ TG RVH+EHHYFGACHGKNVSD+EG +TKEY R+M+ N  W VASS DLC+   K
Sbjct:  258 HDYDTGNHRRSEADNSLVCVYPARCKTESVRYLMGTKLQLYQTVMKDLDQAFAAEKVEVPSISRPSF-DKIIPFYVVEQSLRSCICVHCYKAKLVTKGLCDLWPTLHQGSTPGSKCDCECELCKDGGCAEYLPYGSSKAVHSMADFSDMLMCPKEQLYCSEDGTLEDAHKAVCVSGHCLLCKQKQERFFDCPKNKGNADRQLNPAAG--PAQ--VGAPPPGEVRWKNFTTVDDNGQATSAPLQRRRAPNSTAGGEDDEDFDPLGG-SKRRTRRAVAEKTGTVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGA---KPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMMWRVASSRDLCEKLEK 751          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 3.390e-166
Identity = 248/499 (49.70%), Postives = 321/499 (64.33%), Query Frame = 1
Query:    1 HDYAP-GNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVPWPTLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHRSACVSGHCLHCQRKQDHFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTATSXXXXXXXXXXXXXXXXXXDPNGGGNQTRSRNAVAEKKGSVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGALTKEYARQMVTNTRWTVASSEDLC 1494
            HDY   G+H RS  DNS+VCV+P  C+   V Y+ GT+  LY   M+DL+ A  AG  E+  I  + F + ++PFYV+EQS+RSC+CVHCYKAKLIT AL   WPTLH GD   S CTC C  C DGAC  +LP+ +  SVH M + SD+ LC K  +Y  ++G  ++AHRS CVSGHC  CQRKQ  FF CPR++G   R+   + +T  A  +  E  PG ++W +FT+VD+ G AT A                    +P    + +R + AVA K G+VDDF  E + IF R+  HRRQY  QR AF+E   T+++G V+ V DFQE+LQL +QDEVQ+QHW   + TIFPC I+F+  GRVW YSFQ+LSDD TQD+AWVQ+VM K+L++ +PAL+R++GA     M  A  FTDNCAKQFKCRFHF W+A   +   D  G++T   VH+EHHYFG+CHGK+ SDSEGA TK   R  + N  W V S   LC
Sbjct:  116 HDYRQRGDHIRSDADNSLVCVHPEKCETHRVHYMTGTQQHLYHQCMDDLQVAFSAGRAEIASISRSSF-DKMVPFYVVEQSIRSCLCVHCYKAKLITVALYQLWPTLHHGDNSGSGCTCNCGFCSDGACRTFLPFATEKSVHGMGDLSDLLLCEKVFIYRGQNGKDVKAHRSVCVSGHCPTCQRKQAAFFGCPRHQGTTDRRFPSSAATLGACPSAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDW----EPRVASDTSRPKKAVATKTGTVDDFTKEFKDIFRRYIPHRRQYHNQRSAFHETLRTLEEGTVVFVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDHAWVQHVMFKILTEHVPALMRKLGA---PAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVCDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGANTKGVTRHNIINQSWVVQSPRHLC 606          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 3.100e-158
Identity = 255/501 (50.90%), Postives = 323/501 (64.47%), Query Frame = 1
Query:    1 HDYAPGNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVPWPTLHRGDTPSSPCTCGCDLCKD-GACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSK-DGTSIEAHRSACVSGHCLHCQRKQDHFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTATSXXXXXXXXXXXXXXXXXXDPNGGGNQTRSRNAVAEKKGSVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGALTKEYARQMVTNTRWTVASSEDLCK 1497
            HD A GNH RS  DNS+VCV P LC+   + Y+MGT+ QLY++ MEDL+ A E G VEV  I    F + +IPFYV+EQS RSC+CVHCYKAKL T +L   WPTLH G+T  + C+C CDLC   G C ++LPY S   V SM   SD  +C K  LY +  +G +I AH S CVSG+C  C+ +QD FF CPRN+GG+ R + PA +++           G + W +F  VD  G A   +          XXXXXXXXX           +  V  K+G+VD+F  E+R I   + KHRRQ+  QR  FNE   T+++G+V+ VVDFQE+LQL +QDEVQSQHW   + TIFP  I+F+  GRVW YSFQ+L+DD TQDN WVQYVM +LLS  +P LLR+VGA    PM +A +FTDNCAKQFKCRFHF WVA + +   D  G+AT  R+ +EHHYFG+CHGK+ SDSEGA+TK   R  V N  W V + E LC+
Sbjct:  246 HDRAKGNHIRSDADNSLVCVRPELCQTHGISYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFED-IIPFYVVEQSPRSCLCVHCYKAKLATVSLVKMWPTLHHGETTGAACSCTCDLCSSAGGCKEFLPYSSPKEVSSMGKLSDKLMCDKIFLYTATGNGKAISAHSSVCVSGNCPRCKERQDRFFGCPRNRGGIDRDLGPASTSSSTIHPAGRTSGGTVEWSMFDTVDEAGRAVGPSRRRGANAGGDXXXXXXXXXXX-----XXXPKKGVVVKRGTVDEFFEEVREIQGVYRKHRRQFHHQRSTFNETLATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKMRGRVWCYSFQVLTDDRTQDNVWVQYVMNQLLSVHVPGLLRKVGAA---PMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGAITKLAERTNVMNGSWVVRNPEHLCE 737          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.310e-74
Identity = 180/498 (36.14%), Postives = 241/498 (48.39%), Query Frame = 1
Query:    1 HDYAP-GNHTRSLEDNSMVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTYFTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVPWPTLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHRSACVSGHCLHCQRKQDHFFECPRNKGGLQRQVQPAVSTTPATDATDEPPPGEIRWKIFTNVDSRGMATTATSXXXXXXXXXXXXXXXXXXDPNGGGNQTRSRNAVAEKKGSVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGALTKEYARQMVTNTRWTVASSEDL 1491
            HDY   G+H RS  DNS+VCV+    +E+ VR   G                 EAG  EV  I    F + ++PFYV+EQSLRSC+CVH Y+AKLIT ALC  W TLH GDT  S CTC C  C DGAC  +LP+ ++ SVH M + SD+ LC K    +++  ++ + H S  +    +   R+       P +   L      A+++T                       S G A   T                   D +G      + ++   KK ++               K+  +Y    +       T      + V DFQE+L+L +QDEVQSQHW     TIFPC I  +  GR               DNAWVQ+VM K++++ +PAL+R++GA     M RA  FTDNCAKQFKCRFHF W+A  ++   D  G +T   VH+EHHYFG+CHG + SDSEGA TK   RQ + N  W V     L
Sbjct:  220 HDYRRRGDHIRSDADNSLVCVH----REKEVRNSPG----------------FEAGAAEVGSISRRSF-DKMVPFYVVEQSLRSCLCVHYYRAKLITVALCQLWSTLHHGDTSDSGCTCTCGFCSDGACRTFLPFATAKSVHGMGDLSDLLLCEKG---IARHASAGKRHSSVVLVITAVSSDRR------FPASSAALG-----AIAST-----------------------SEGQAGKPTD------------------DDDGDWAPRVASDSSRPKKLTISP-------------KNSEKYSGDTLLTGG-STTPNGAHSVFVFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGA---PAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHL 609          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.020e-37
Identity = 77/166 (46.39%), Postives = 100/166 (60.24%), Query Frame = 1
Query:  907 YKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNV 1404
            + T+RI      LT+++G V+ V DFQE+ QL +QDEVQSQHW   + TIF C I+ +   R+W YS+Q+LSDD TQDNAW      +L                         FTDNCAKQFKCRFHF W+A  ++   D  G++T   VH+EHHYFG+CHGK+V
Sbjct:    6 HPTERIQ--RTSLTLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAWALPPWCELF------------------------FTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKSV 145          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 3.470e-36
Identity = 89/226 (39.38%), Postives = 108/226 (47.79%), Query Frame = 1
Query:  907 YKTQRIAFNELKLTIQDGEVLCV-VDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGK-----------------------------NVSDSEGALTKEYARQMVTNTRWTVASSEDLC 1494
            + T+RI  N   L    G   C  +  QE+LQL +QDEVQ QHW     TIFPC I+F+  GRVW YSFQ+LSD                         +RVGA  A  M RA  FTDNCAKQFKCRFHF W+A  ++   D  G +T   VH+EHH+FG+CHGK                             + SD +GA TK    Q + N  W V     LC
Sbjct:   10 HPTERIQRNSPYLR---GRYGCFRLRLQEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG--------------------QRVGAACAPTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLC 212          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 6.580e-32
Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 1069 IFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGALT 1428
            I+F+  GRVW  SFQ+LSDD TQDNAW Q VM KL+++ +P L+R++GA     M RA  FTDNCAK+FKCR HF W+A  ++   D  G++T   VH EHHYFG+CHGK+V       T
Sbjct:  120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGA---PAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKSVQSPRHLCT 236          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: A0A6H5JW27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW27_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 8.320e-22
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 1
Query:  313 TLHRGDTPSSPCTCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSIEAHRSACVSGHCLHCQRKQDHFFECPRNKGGLQRQVQPAVSTTPATDATDE 651
            TLH GDT    CTC C  C +GAC  +LP+ ++ SVH M   SD+ L  K  LY  ++   ++AHRS CVSGHCL  QR+Q  FF CPR+     R+V  + +   A  +T E
Sbjct:   13 TLHHGDTSDLGCTCTCGFCSNGACRTFLPFATAKSVHGMGVLSDLLLSEKVFLYRGEEANDVKAHRSTCVSGHCLTGQRRQAAFFGCPRHHVSTDRRVLASSAALGAMASTSE 125          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: A0A815R815_9BILA (Hypothetical protein n=2 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A815R815_9BILA)

HSP 1 Score: 74.3 bits (181), Expect = 2.000e-10
Identity = 57/235 (24.26%), Postives = 104/235 (44.26%), Query Frame = 1
Query:  805 TRSRNAVAEKKGSVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGALTKEYARQMVTNTRWTVASSEDLCKSWRK 1509
            T  R       GS+   + +L+     + +H    + Q   F ++K   +D  V+C VD+ E   + +QD++QS HWGK   +IF    +F   G     SF ++S+ +T  N +      +++ ++I +++  V  V+         F+DN + QFK R+  +++ +  +  +D         +     YF + HGK V D  G   K      +       +S+ED  K  R+
Sbjct:  104 TNGRAVKQVFSGSILQCVKQLKDKTPSYLRHVYIKRKQSQYFEDIKTNARDNTVVCQVDYAENFSMDNQDQIQSAHWGKKFVSIFTAYAWFGGSGGDG-QSFGLVSNSITH-NKYSVITCLEIIINEIISMILDVNEVI--------FFSDNASSQFKNRYVINYLTNM-LDTMD---------IDFNWSYFASAHGKGVVDGVGGTLKRLVWLEIMAGE-QCSSAEDFVKICRQ 317          
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Match: A0A816W7B1_9BILA (Hypothetical protein n=3 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816W7B1_9BILA)

HSP 1 Score: 74.3 bits (181), Expect = 3.740e-10
Identity = 57/235 (24.26%), Postives = 104/235 (44.26%), Query Frame = 1
Query:  805 TRSRNAVAEKKGSVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLTIQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVWVYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATVFTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGKNVSDSEGALTKEYARQMVTNTRWTVASSEDLCKSWRK 1509
            T  R       GS+   + +L+     + +H    + Q   F ++K   +D  V+C VD+ E   + +QD++QS HWGK   +IF    +F   G     SF ++S+ +T  N +      +++ ++I +++  V  V+         F+DN + QFK R+  +++ +  +  +D         +     YF + HGK V D  G   K      +       +S+ED  K  R+
Sbjct:  251 TNGRAVKQVFSGSILQCVKQLKDKTPSYLRHVYIKRKQSQYFEDIKTNARDNTVVCQVDYAENFSMDNQDQIQSAHWGKKFVSIFTAYAWFGGSGGDG-QSFGLVSNSITH-NKYSVITCLEIIINEIISMILDVNEVI--------FFSDNASSQFKNRYVINYLTNM-LDTMD---------IDFNWSYFASAHGKGVVDGVGGTLKRLVWLEIMAGE-QCSSAEDFVKICRQ 464          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig163.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FXZ3_ECTSI1.790e-21863.22Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G3S2_ECTSI3.390e-16649.70Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FWS2_ECTSI3.100e-15850.90Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K4U5_9PHAE3.310e-7436.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L1G9_9PHAE1.020e-3746.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXK3_9PHAE3.470e-3639.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFD4_9PHAE6.580e-3253.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW27_9PHAE8.320e-2244.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A815R815_9BILA2.000e-1024.26Hypothetical protein n=2 Tax=Rotaria magnacalcarat... [more]
A0A816W7B1_9BILA3.740e-1024.26Hypothetical protein n=3 Tax=Rotaria magnacalcarat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig163contigP-littoralis_Contig163:460139..471080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog6500.XP_005094568.1
Model size2150
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.12e-16
EggNOG OGs2CNQC@1|root,2QXFF@2759|Eukaryota,39Y03@33154|Opisthokonta,3BMKX@33208|Metazoa,3D3RP@33213|Bilateria
Cds size1467
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig163.70.1prot_P-littoralis_Contig163.70.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig163 462092..471032 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789789.5051508-UTR-P-littoralis_Contig163:460138..4605931680789789.5051508-UTR-P-littoralis_Contig163:460138..460593Pylaiella littoralis U1_48UTRP-littoralis_Contig163 460139..460593 -
1680789789.5186036-UTR-P-littoralis_Contig163:460872..4609361680789789.5186036-UTR-P-littoralis_Contig163:460872..460936Pylaiella littoralis U1_48UTRP-littoralis_Contig163 460873..460936 -
1680789789.5333798-UTR-P-littoralis_Contig163:461975..4620911680789789.5333798-UTR-P-littoralis_Contig163:461975..462091Pylaiella littoralis U1_48UTRP-littoralis_Contig163 461976..462091 -
1680789789.5813825-UTR-P-littoralis_Contig163:471032..4710801680789789.5813825-UTR-P-littoralis_Contig163:471032..471080Pylaiella littoralis U1_48UTRP-littoralis_Contig163 471033..471080 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789789.5433211-CDS-P-littoralis_Contig163:462091..4623841680789789.5433211-CDS-P-littoralis_Contig163:462091..462384Pylaiella littoralis U1_48CDSP-littoralis_Contig163 462092..462384 -
1680789789.5516918-CDS-P-littoralis_Contig163:462763..4631661680789789.5516918-CDS-P-littoralis_Contig163:462763..463166Pylaiella littoralis U1_48CDSP-littoralis_Contig163 462764..463166 -
1680789789.5622568-CDS-P-littoralis_Contig163:469477..4701431680789789.5622568-CDS-P-littoralis_Contig163:469477..470143Pylaiella littoralis U1_48CDSP-littoralis_Contig163 469478..470143 -
1680789789.5709405-CDS-P-littoralis_Contig163:470927..4710321680789789.5709405-CDS-P-littoralis_Contig163:470927..471032Pylaiella littoralis U1_48CDSP-littoralis_Contig163 470928..471032 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig163.70.1

>prot_P-littoralis_Contig163.70.1 ID=prot_P-littoralis_Contig163.70.1|Name=mRNA_P-littoralis_Contig163.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=489bp
MVCVNPILCKEQPVRYLMGTRSQLYDTVMEDLRQAHEAGEVEVDRIGNTY
FTNSLIPFYVLEQSLRSCICVHCYKAKLITKALCVPWPTLHRGDTPSSPC
TCGCDLCKDGACSKYLPYDSSASVHSMANFSDMHLCAKERLYVSKDGTSI
EAHRSACVSGHCLHCQRKQDHFFECPRNKGGLQRQVQPAVSTTPATDATD
EPPPGEIRWKIFTNVDSRGMATTATSSQRRGRRQTAGDDDDDDYDPNGGG
NQTRSRNAVAEKKGSVDDFMLELRGIFNRFTKHRRQYKTQRIAFNELKLT
IQDGEVLCVVDFQERLQLQDQDEVQSQHWGKLATTIFPCAIFFRCDGRVW
VYSFQILSDDMTQDNAWVQYVMAKLLSDDIPALLRRVGAVLAEPMERATV
FTDNCAKQFKCRFHFDWVADADIGALDKRGDATGKRVHLEHHYFGACHGK
NVSDSEGALTKEYARQMVTNTRWTVASSEDLCKSWRKP*
back to top

mRNA from alignment at P-littoralis_Contig163:460139..471080-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig163.70.1 ID=mRNA_P-littoralis_Contig163.70.1|Name=mRNA_P-littoralis_Contig163.70.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10942bp|location=Sequence derived from alignment at P-littoralis_Contig163:460139..471080- (Pylaiella littoralis U1_48)
CACGACTACGCGCCGGGAAATCACACGCGTTCGCTCGAGGACAACTCCAT GGTTTGCGTCAATCCTATTCTGTGCAAGGAGCAGCCGGTGCGCTATCTCA TGGGGACGAGGTCGCAGCTGTACGATACAGTCATGGAAGATCTGCGACAA GCGGTGAGAACCCACCAACTGCTACGTCCATCGAGTGACCCGGCCAGCGG TACCTAAATTATTGCCTTGTTCCTTGAGAAAGGAACCAACACCTTTTTCG GTAATAACAATTTCACGTTTAATGCCAAGAAGGTCTCTCTTTTACCACCG GCGAGAGTACTTTTTACGCGGTTTTCCTAGAATCCCTACCCCCCCGGTCC ACGTTCTTCGCCGCGAAAACAGGGCCTCTTACTTCAAATTTAGACCGGCA GTTGCGTATCGCTCACGGGTGTTCAGTTTCAGATACGGGCTTGTTTGTCC GATGATTTCGACGACTACTTTTAAGGAAAATACGGGCTGCCAATATTGCA CGGCCTGTCGACATCATTTTGTATGTGTTCATATTTTTATCGTTACAATT TCTTACCTGGAGTCATGCAAATGGGTACCATGTGGTTCCTTGAGTGGATT GATGGGATCCTCCGCGTACCATTGCTCCTTTCAGTGTACGCAGGCCGTGA CCACGGATATCGTCCAATGATCGGATGGGGTATGAGCATTAGATAGTGCT GATGTAAGATGAGAAATCGGACTGGGTACAAATTAGAAAAAGCACGCGCA CGTATACAATTAGACTAAGTCCAGATCCTTGATAAAGAGTGAAAGGTTAC TCGACTAAGGAACCAACCCAATTTCACCAATATAGCATACGCCGCTGTGA GTAGTCGTCCAACTCTCGAACACGTAGAAGTACTTACTCTGTCTTTCATC GCGTTTTTGTCTGTTTTGTCTGCCTTCCTTTCGACAGCACGAAGCCGGTG AGGTTGAGGTGGATAGAATCGGAAATACCTATTTCACCAACTCTTTGATC CCCTTCTACGTGTTGGAGCAATCTCTGAGATCGTGCATCTGCGTCCACTG CTACAAGGCGAAGCTCATCACGAAAGCCCTGTGTGTTCCATGGCCGACCC TCCACCGAGGAGATACGCCGAGCTCGCCGTGCACCTGCGGTTGCGACCTG TGCAAGGACGGCGCGTGTAGTAAATACCTGCCGTATGACTCGAGCGCGTC CGTGCACAGCATGGCGAATTTCAGCGACATGCACTTGTGCGCAAAGGAAC GACTGTACGTGTCGAAGGATGGTACTTCGATTGAGGCCCACAGGTCTGCG TGCGTTTCCGGGCACTGTTTGCATTGTCAACGCAAGCAAGACCATTTTTT CGAGTGCCCGCGAAATAAAGGGGGCCTGCAACGACAGGTGCAACCAGCCG TTTCCACCACTCCTGCAACGGATGCTACGGATGAACCGCCGCCGGGGGAA ATAAGATGGAAAATCTTCACCAACGTAGACAGCAGGGGGATGGCAACAAC CGCCACTTCTTCACAGCGACGAGGACGGCGACAGACGGCTGGAGACGATG ACGACGACGACTACGATCCTAACGGAGGAGGAAACCAGACCAGAAGCAGA AATGTGAGGAAAACAAGAAAAATATGTTGAATGATTCCGGTGGAGTCGAG CCGCGTGTCTCCCGCTAGTTACGCACACAACACGCACCGATGATGGTATA GTTGCATGGCTGTATCTGAGGCTATGTTAGAGTAAAGGTGATGCCCAGCC AAGAGAAGATAGTCAATTCACGTCACATGTACGAAATGGAATTGAGTATT GGCACAGTTACTTACCTGAAGAATAGGAGTTCGTGACAGAAACACAGTCC CTCACACCTTCTCTCTTAGGTTTTCCCTGACTTTCGTCGTTCGTCTTCCG TGTTGAAACTATATTGTCGTCTCATCATTCGGCTTGTATTCAAATGATGC GTCAAGGAATATTTGCTTCGGTGTGTCGGTTATGCGTTGGTATACCTTCG GTCTGCGCTCAGTTTCTGGATTACCATGGTTTGCATTGGCGATTGTTTTT AGTTCTTGTTTTTTTCTAGTCGGTGTTTCTATGTTTTGTACTCGGAGTAT CTAGCAGCAACTCGGTCCCCCACAGAACTATACTATCTATTTTTTTTATG GTGAAACCATCGTCTAATATTTTATTCGCATATTTTACGAAGTAACTCCC TATATTTCAGGGCGGTACGTGGCGCCGCAGGCGCCACGTACCATCCCATC GGGGTTTTAGCCCGCCGCAGGCGGAAAAATTTTTAGGGTTCCCATCAGGT TAAATGGGGTGGTATTTGCGCCCATTCTGATGGTAATACGATGGGATGGG ATGGAATCATACATGATGGGATGGGATGGGATGGGATGAGAGCAGGATGC TAATGGGATGGGATGGAACGAGAGCAGGATGCTAATGGGATGGGATGGGA TGAGAGCACGATGCTGATGGGATGGAATGGGATGGTGACTGGTGGGACAG AGTGATGGAATGGGGGAATTTAGAACTCAATGACCTGCAAGCACCAACAA CTAACCCAAGCCAATGTACCAGACACATACATCTGATACGCTGAAACGAA AACGACGAAATCAACAGCAAAAACAAAGCAAAACAAAAGCACAAAGACCA GCGACCCTAGTTCAAGGTGACAGTACTCCCTTCCCTGGCTTGCTGGACGG CAACCACGGCCTTTGCGTTTGCGTCGTGCCTTGCCTTCAATGCGGCCAGC TCTTGCTCTACTTTCGCAAAGCCTGGGATGAGGTGCCTGTTCAGCCTAAG CAAGAGCATCTGCTCGATCTTACGAGGCAGGGTACCGGCACGCATGTCAC TTAGGACCTGCTTGAGGGCGGAAAAGTTCCTCTCCGCTTGACAACTGGTG GTGTCTACGCCTGCGTACACGCGTGCTAGCAAACTCAGATGCGGCCAGCG GGCAGGCGCTACGACGTTCCCGGACGCGTCTACCCCATCCACGCCCCGCG CATTCCAGTACTTCAGTAGGTCGAACTTGGCGTCGTTGGTGGCGGCCGCT TCTTTCATGTAGGCGGCAAACTCGCGCTCTGCGACGTCCGCTCGATCCTC TGCCGCATCCACGTCGCCCGTGGGGCCGGAGACCTGGGTGCTTAGACTCG CTCTGATCCTCTCCATTCTGGACATCTTCGCCGGCTGGGGAGGGTCACCG CCTCCCGCAGAGGGGTTCACGCCCGAGGGTTCACGCCCGCTGCCGCCTCC GGTGCCGCCCCGGGAGAAGCCTCCGAAGAGCCCCCCGAGGCATTCCCCGT TTCTCCGACATCCGCGCTCGCAGATGCAGTGCCGGAGAATCCCCCCAACT TCTCCCGCACCGCGCTGGCTGCAGCCTGCTGCAGGCTGTACCCCCCGTTG GAACAAACAGCGAGGCAGCAGGACTTGAAACGCGGATCGAGCATCAGGCA TATCTTCTCCGTCGGCTTCTCAGCACGCGCCAAGCCCTGGATCCCATGTC GTCCACTAGGATTTCCAGCAGCTCCTGAACCTCCGGGAGAAGGTCCGTCA CGGGGATATCTTCGGAGTCGCCATCGAAAGGGTCAAGGCTAACGACGTCC TGTGTCGATTCCGACAACGACGTCAGCAGCACGTACATTGAGTTGATCGC CATGCCCACAAAGCCATGTCGTCCACCCTGGACCTGCGTGCTCACCAGTG AGGCGTCTTGAAGGACACTGATAACCTCACGGGCAGCCTGCCACTGCGCC GGCTAGGCGCGCGCGCGCTGATCTTCGGCTTGTTCAGGTTCTCTGTGAAA AACGCCTGCATGGGCTTGTAGAGGCGCACCTCCCGCTGAAACATCGCATA CACTGACCCCCACCTGCAAGGGGAATGAAAGGAGGTGGGCACGTTGAAGT TGATCGTTCAACGTGCCGGTGGTACCAACAAATAATACGGCGTGTTCATG CATGGGAACGTAACAGCAACTGTAAGCCAGCACAAGCGTACGAAGCACTC GGACAGGGCTGGAAATACTTCGCCGCAACAACTATCGGCAGTGTTTCTGG GTCTCAGCTACATTACAGAACTCAGGTCTAGGTAACTCCAAGCTAGTCTA AACAAGAAACAGCCACACACAGAACACACCTCGTATCATTGCGGCGGAGA ACCTCCAAAGCGGTGCACAGTTCGTCCAGCTCCGTTTGCAGCTTTTTGAA GGCGTCGTTGTTGCAAGGGGAATGGCTGAAGACCCCCGCAAGCGCGGTCA TGACAGCGGTTAGGTTGCGGAGCTCAGGGTTTTTGCACGTGCCCGTCTGC GTTGCCTTCACGAAGGAGCCGGCGATGCCCATTCCCCAGTTGATCCCGGA GTTGAGCCGATGCCCCGTGCAGATCAGGACCGGCACGCCCATGCTCTCAA ACGCATTCACCATGTTGCCTCCTTGGTCGACTGTGGCAGCAACGTAGATC TTCGCTGGCTCAGCGTTGGCGTCTCCCACGATAGGCGCGAAGAACTCGGT AGTAACCTGCTCAACGCGAAAGGAACACGATCAGCGTATGCCAGGCATGG GGTTTGGGTGTGGGTTTTTCAGAAGAAATGAAGGCACGATTGAGGACAGG TTGATACAAACCAACGCGACAATTGGTGTCCTCGAACGCAAGAGGTGTCG ATCATAAATAAATAGAATACAATAAATTGCCTGCGAAATTCATATCAATG ATAATCCCTTCTAGAAGTTCTGCCACGCGTGAAAAAATACTCCGGGACGG CTAAAAATACAGATTAGAATCAACAATCAACCAACAGAGTAAACTAAAAA AAAAAAACAACGGAGTAAAACCTAAATAGAGACTCACCTCACGGATCCAC GGGTCCACATCGCTTGCCGTGTGCGTACCCGGGAACGCCTTTGTCGTCAG CGTCAGTCGCTCCATCTCCGTGTGACCCCGCGGGATGAAGGAAACGGTGA GAGTGCAGAACTCGGTGCCGTGCGTACTGGTTAGGTCCGACTGCACGCCA AAGAAGGGCCCGCCCCACCCGAGTTTCTTGCAGGAATCTACGTGGTCCTT CAGCGTCGTGATGAGGTTGGCGCGAACATCGGCGGCCAAGGCATCCAAAA TGTTTGAAAGTGTGCTCTTGTGTATCGTCTCCGTTACGTACGCCGGGCTC AAGCCGCCGACGAAGTACTGGAACCCAGCCCGATGCGCCATCGAGAACGG CCGCATGTCGACGCAGCACATGATGACGTATCGGACCTGGTGCTTTCTCT TCTCGGTGGGTGTCATGGGTTGGATGAAGTGTTGGGCGATCGAGCGTGAC CCCGCTGCAGGCTTGCCGTCCTTCTGATCCGAGCTTCCTGGAGGGTTGCA ACGAACATGCAACATAGCAGCAGCAGCAGGTGTTCGATGTCATTCGTCAA ATTGTATGAGATGGTACTTCATAAACACACAAGATATCCCCTGCCCAAAA CCAAAAATTAATTAAATAATTTAAAAAAAAACACCTACACATATATATAT TGTCCCCCCCAAACAATAAATAACTTAATTGAAAATAAAATACACCTAAT AGTTAGTCTGCATGGTGCCTTTTATATATCGCTTGAGTGGTGACGATAAA AGCGCCACTGATTTACATCAATAAATAAAATTTTATTCAGCGCAGTTCTG AAAGGGGGAAAAAAATAGTTTTGGTCTGCTCTATATCACAGTCTGCCACC AACATTCAATCTGTCCAAAGAGCGGTTGGAGGAGGGCCGGTTGATGCACT CCCTACCTCACAACAACAAGAGAAATCGCAGCTGAAAAACCCCGGCAGCT CTGTTGGGGTATGTTATTCAACGTATATACTTTTCTTTTCTTCTTTGCGG CGAAAAAAAAATCTGCCGCAATTTTTTATTTATTTTTCAAACAGCACCAC ACACAGCAGCAACGCGCAGCGCGCACCGGTACCTCACCATGTAGGATGGC ACCCCTGGTAGTTCTGGCCTCCCTTGATCCACGCCCATCGTCCGTGGCGG CCCATACCGTGGAGTGCTCATTGTGCAGGTGCTTGACTAGTCCACTGGTT CCCGTGGCGCTGATGTTGTTTTTCCTATCCGCGGCGCGGTGCGTGAACCG CGCTCCACACACATACTTGCGCGCAGGCAGCAAACCAGACGCGGGCAGCC ATTTTTCTACTATACACTTGACGTTCTTGCCATCCGAGTCGGCCGGCGTG AACTGCACAAAGTGGTGCCACACGTTAGACGTCTTCCTTCTCTTCCCTGA ACCAGCCCCGACCGCCACGGCGGTGGTGCTGCTGCTGGCAGCAGCAGTGC CAGCAACAACCGACACTGCCGTCTCCGGGCTCGTTCCAACACCGCCGTCG GGGTCGCCAGATGAAGGCGTTGGGGGTACTGCTGACTCCGATCCGCCGCC GCCATCGCCGGCGATAGGGGTACTCATGTGCACGTTCTGTTGTGGTGTGT TTTGCAGCTGGTGTGTTGTGTTTTGTGTTTTGTGTTTTGTGTTTTTTTTT CAAAAGAAAATCACAGAATCAGCAGGGGGTGGGTTGCGGTCAACCCCCCT ATGCACACACATTTTTGCCCACACACACCCCTTTCCTTCAAAAAGTACGT CCATAGTGGGTAGGGGGGGCGCGAGGAGAGGGTTGTGTTGGTGTTCGTAG GGAATCGGGGGAAGAGTGATGGGTGCGAGGAGCCTGTTGTGGATGGAATG GTGGTACCTTCAGCAGCCATGATGGTAAATAAGATGGGATGGGAAGGGTT CAAAAACCATTACCTTTTACTAATGGGTTCTCCGAACGGCGTGGTGGTCA CTAAATGGTATCTGCTGATGGGACCAAAATTCCGGTACCATTACCATACC ATCCCACTAAATACCACTAAGTACCACGTTCCCATTCCATCTCAATACCA CGTACCGCCCTGCTATATTTTGCTTACTCATAATTTAATATGTGCGTTGC TTTGTCCGTGACCACGGGCTAGACTTTGTTGGTCAATTTATCTTAATCTA CAAAAATCAACCTTTTGTGGTGCTTCTCTCGTGGCACACCGCAGTGCCCA CGGCTAGTTGTCGATTGCGTGTAACTCTTCTTTTCACCTGCGTTCATGTG GGCTACCCTTTCAATATCAAAGGGTTGTTTGCTACATACAGTAGTACCAG GGGATCGGGGTTGAGTGTGCGTTGGAGGGCCGCTTCTCAAATAAGTACTT CAAGAAGCAGTGTGCGCTGCTGTTTGCTGCAGCGCTGCTCAACGACAAGT CGGTATGCGAAACAGATGGACAAGGAACATACACTTTTTTTGTGGCCTGC TTTTTATAAAACTCGTATTGCGAGCCAAAAGCTTTCTAGAGGAGGCCCGG CGATAATCCACGTCTACAATTATCACCAAGCGCAAAATAATTTATTTCGA TTGTTTCCAAAATGTAACACGATCGTGGGAATCATATAAATTATACATTG CATTATCAAGTGGTGGTTCCTCAGGTAAGGAAACTGGGGAAGACAAAAAC CCGGCGCGTTATCATACTTCCTCTACCTCTGCAAGTCGCATGAATTTCAT TTAGAGAGCTCGGTTGTACCTTGATACCCGTGATAAACTTGTTGCGTTTC TCGAAACCTGTTGGTTGGCAATGTTGTTTTGTGAGTACCGTACCCCCCTA CCTTCCAACAAAGGAATTGTAGTGCGTTCGCTTTTCGAAACGCACATAAT TGCCTACGACGCTTTTTAGCAACTGTGGCAGGCATCGCCAGATTCATTAC TATGCGTTGGTCGAATGTCTGAATGTTATGCTTTTATCGTATTCTCCGAG TATTACCCTTTCATAACCTTGAGCGTTTGTGTGCGGAAACCAACGACGCT TCTCACATTTTCACTGCATTTGTACCTAAATGCCCTTTTACGTCTTGTTT TGCCGTTAACATAGGCGGTAGCTGAGAAAAAAGGATCTGTAGACGACTTC ATGCTTGAACTGAGGGGCATCTTCAACCGCTTCACCAAACACCGGAGGCA GTACAAGACCCAGCGGATCGCCTTCAACGAATTGAAGCTCACCATCCAGG ATGGAGAAGTTCTTTGCGTCGTCGACTTCCAGGAACGGCTGCAACTTCAG GATCAAGACGAAGTCCAGTCCCAACACTGGGGTAAGCTAGCCACGACGAT TTTCCCCTGCGCGATATTCTTCAGATGTGATGGCCGTGTCTGGGTATACT CGTTCCAGATCCTCAGCGACGACATGACTCAAGATAACGCCTGGGTGCAG TATGTCATGGCGAAGCTGCTGAGCGACGATATTCCGGCCTTGCTCAGGAG GGTAGGAGCTGTGTTAGGTTATAGGGGCTAATCCTATACACCATAGTAGT CAGACTGTCTGACTACTATGGTGTATAGGATTAGCCCCTATAACCTAACA AAAGAAAGGCTCTTGGGGGTTCGAATTCCAGACCACCCTTCTCCGGGGAT TAGCCCCCCTTGCCATGCGCTGCTACTGCGAACAAGTGGATGGCGACTTT TGCTTCACCGAGTTCCCAGTTTTTCTCTGGCGGAAAAAGAGCCACACACA TGTGCTGGGATTCGAACCCCCGACCTATCCCTTGTTAGATTATAGGGGCT AATCCTACACACCATAGTAGTCAGCGCTGGTGTATAGGATTAGCCCCTAC TGCTGACTACTATGGTGTATGGGATTAGCCCCTATAACCTAACAAGCTGA ACCGATGGAGCGCGCAACCGTTTTCACGGACAACTGCGCCAAGCAATTCA AGTGTCGGTTTCACTTCGACTGGGTCGCGGACGCCGATATAGGAGCGCTT GACAAGCGCGGGGACGCCACCGGCAAGAGAGTGCACCTTGAACATCATTA CTTTGGGGCGTGCCACGGCAAGAATGTGTCGGACAGCGAGGGTGCACTCA CGAAGGAGTATGCCAGGCAGATGGTTACCAACACGAGGTGGACTGTCGCC AGCTCGGAAGACCTCTGCAAAAGCTGGCGAAAGCCCTGAACTTCTTGCTT AGGCCGGCCACCAGTGAAGAGAGAGGCGCCTTCGTCATGGAGCGAGGCGG AAGGACCGGAGGAACAGATCAGTTACTCATGACCAAGGCAAGTTACAGCG GTAGGGTAATTAGTACTTTTGCCTCGAGGTGGAAAATCTTTTTTTTAGTT TTTGCTGACCGCCATGCTTAATTATTATTATGTTGGCAAGCTTTTTGAGC AGAAAGGTATATGTCGCAGGTTGGGTTCCCTCGTCGCCGATGCGGATCTG GAACAAAGTAAATGGTGTTTAGAGGAATACGGGATTTGTGTGGCGTGGAG TTATAGTAAGGGTTAGGAACAAGGGATCGAGGTGGCGCAATGCATAATAA GTAGAACCGCCCAAAACGATCTAATCGTGTACGTTGGTCGTGCGTCAACT AGCATTAGCAAAGATCGCTGCATGATGAAAGTGCGTTTATCTGGCTCTGT GCTTGAGTGTGTTCACGCAGCTTGATACGAAGTACTTAAAGTACGAAGTA AATTGACGAATATAATTTGAGTCATACCACGATTGTGCTAGCAATCTTGG TGTAAAATGAAGTTGGAGGCGCACAAACAGCCTTAAGATACGCAAACTCT TACAAATGACACACATTGGAGTTCCTCACATGACGAACCAACGCCGTCTC GCCCTGCTCAACTACAGGTACCCACTCGAAATAATTGCGAAATCGTTTGA TAAACGCGAATCCTTTGCCGGTCGGTATGTTGCCTGTTGAACGTTTAGGG TCAGACTCTACCGGGGATAACTGGGGGTAATCCTTTTCCGGGGTGTATAC AATAGTATTGCATAAAAAATAAACGAGCCCCCAAGACACTATTTACCCTC GGGGTGGTGTGCATTCACAGAAAAAAACGAAAAAAGTCGGAGGAGAAGGA AGGGGAAATAACGATAGCTTCAAAACTGAGAAATGTGGAGAGTTCAAGAA CGACTTTTTCAAAAGCGCCATAGACCACCCCATGTAAACGCGCCACGTCA AGGACTGTGTGCAATTGATCAACTCAACTAAAAAAAGGTGCCTTGACTGA AAATCGGCATATACACCCAGATGAAGACGCAGATCGCATCATGAGAATTC CGGTGTTCGTCACATGAGGTAGTACGAATCAATTTGACAGTGAGCCTCGA GCCGACAAAACCCAATGTCTCGCTCGAGTCTTGAGTCAAGACTGGATGTT CATGTCGAGTTTTTTCAAGTATCAACCGACTGCCCAATCGCCGATTCTGA CATTCCACACTCTCTCATGTTACGATACTGTGTGTGATGTTAAGTCGACT TTACGTCATTTTCAAGCTTCTCGACCATAGAAAACCATGGAGGCAACAAA ACAATACAAAACTATCCAACCCGATAAGAAATCAACTAGGCTAGATGCGT AATAGTGACATCGATAATAGGAGTGATACAGTTAAAACACGCGTAATAGT GACATAAAAAATAGTGATATGTTGAAACAATAAGAAGTGTATGTCTACCG TACTTCCTCACCTGAGGAACCAGTAGTGCGACACTGCTGTGGCCGTAGAT ACGCTTTCGTTTGCCTGTCTTGTTTGCTCCCCTCCTCGCTTAAATCCCTC GACGTAAACGTCTCCAGCTGTGGGGAATGCTTAGAGCATAGAACCGAGAA CTATCCTCTTGTGCGTAAGGGCATCATGGAGGGACCGAAAGAGTTTGCAA GAAGAGTTGGCCACGTGAACGACGACCTACTCAGCGCTAAGGCGCAAGAC CTGACCGAAATGTTTGAGCGGATGAAGGGCGATCTGCCTTTTGGCTCCAC CGCTCTTCTCCGCGTAGATCCCTCTGACCATTGTGGTGAGGACATCGTTC CAGTGCTCCTAGCACGTAAGGCACCAAGTATATGGTCGCCTGACTACTCG GCTGACGGGATGTTCACTCACGGGGACTGGATGGTGTGGGTT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig163:460139..471080-

>mRNA_P-littoralis_Contig163.70.1 ID=mRNA_P-littoralis_Contig163.70.1|Name=mRNA_P-littoralis_Contig163.70.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1467bp|location=Sequence derived from alignment at P-littoralis_Contig163:460139..471080- (Pylaiella littoralis U1_48)
ATGGTTTGCGTCAATCCTATTCTGTGCAAGGAGCAGCCGGTGCGCTATCT
CATGGGGACGAGGTCGCAGCTGTACGATACAGTCATGGAAGATCTGCGAC
AAGCGCACGAAGCCGGTGAGGTTGAGGTGGATAGAATCGGAAATACCTAT
TTCACCAACTCTTTGATCCCCTTCTACGTGTTGGAGCAATCTCTGAGATC
GTGCATCTGCGTCCACTGCTACAAGGCGAAGCTCATCACGAAAGCCCTGT
GTGTTCCATGGCCGACCCTCCACCGAGGAGATACGCCGAGCTCGCCGTGC
ACCTGCGGTTGCGACCTGTGCAAGGACGGCGCGTGTAGTAAATACCTGCC
GTATGACTCGAGCGCGTCCGTGCACAGCATGGCGAATTTCAGCGACATGC
ACTTGTGCGCAAAGGAACGACTGTACGTGTCGAAGGATGGTACTTCGATT
GAGGCCCACAGGTCTGCGTGCGTTTCCGGGCACTGTTTGCATTGTCAACG
CAAGCAAGACCATTTTTTCGAGTGCCCGCGAAATAAAGGGGGCCTGCAAC
GACAGGTGCAACCAGCCGTTTCCACCACTCCTGCAACGGATGCTACGGAT
GAACCGCCGCCGGGGGAAATAAGATGGAAAATCTTCACCAACGTAGACAG
CAGGGGGATGGCAACAACCGCCACTTCTTCACAGCGACGAGGACGGCGAC
AGACGGCTGGAGACGATGACGACGACGACTACGATCCTAACGGAGGAGGA
AACCAGACCAGAAGCAGAAATGCGGTAGCTGAGAAAAAAGGATCTGTAGA
CGACTTCATGCTTGAACTGAGGGGCATCTTCAACCGCTTCACCAAACACC
GGAGGCAGTACAAGACCCAGCGGATCGCCTTCAACGAATTGAAGCTCACC
ATCCAGGATGGAGAAGTTCTTTGCGTCGTCGACTTCCAGGAACGGCTGCA
ACTTCAGGATCAAGACGAAGTCCAGTCCCAACACTGGGGTAAGCTAGCCA
CGACGATTTTCCCCTGCGCGATATTCTTCAGATGTGATGGCCGTGTCTGG
GTATACTCGTTCCAGATCCTCAGCGACGACATGACTCAAGATAACGCCTG
GGTGCAGTATGTCATGGCGAAGCTGCTGAGCGACGATATTCCGGCCTTGC
TCAGGAGGGTAGGAGCTGTGTTAGCTGAACCGATGGAGCGCGCAACCGTT
TTCACGGACAACTGCGCCAAGCAATTCAAGTGTCGGTTTCACTTCGACTG
GGTCGCGGACGCCGATATAGGAGCGCTTGACAAGCGCGGGGACGCCACCG
GCAAGAGAGTGCACCTTGAACATCATTACTTTGGGGCGTGCCACGGCAAG
AATGTGTCGGACAGCGAGGGTGCACTCACGAAGGAGTATGCCAGGCAGAT
GGTTACCAACACGAGGTGGACTGTCGCCAGCTCGGAAGACCTCTGCAAAA
GCTGGCGAAAGCCCTGA
back to top