mRNA_P-littoralis_Contig1626.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A7S3MCV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCV7_9STRA) HSP 1 Score: 400 bits (1027), Expect = 1.140e-124 Identity = 216/437 (49.43%), Postives = 280/437 (64.07%), Query Frame = 2
Query: 782 RCLTFP-PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQR-IVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPS---QSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWSTSQLP 2077
+ L FP P T K + FLGL+NYFRDH+PDMT K LR+L+ + K + W P ++F RD+VA CP LFF N +VVMTDASDYG+GAYIFQI++ KE PI+F SK+LHGA+LNW+TIEKEAYAIF TL LLRD KF ++TDHKNLTYIN SSQKVRRW + +QE++F +EHV G++N VAD+ SRL +++ P P D + D S + + + ++ +++ + + Q + P+ + + ++ PFT A+Y PMEVLNVDTIGP+ DE GN FILV+IDCF+RWVELF PDTSA +AA+ALL H GR+G P +RSD+G QF N +I++ + E T AYSKEENAIVERANKEVMRHLRA++YD R W QLP
Sbjct: 65 KVLEFPLPRTQKDLQAFLGLINYFRDHIPDMTSHEKPLRALIDTSKKNTTLTWHPLAVEKFHTARDIVARCPALFFVDANATIVVMTDASDYGVGAYIFQIIDGKEKPIIFFSKALHGAELNWATIEKEAYAIFLTLSKFGHLLRDNKFLLKTDHKNLTYINAGSSQKVRRWGIAMQEYDFIIEHVPGKDNFVADSLSRLVANNSPVKPEVPTLALIPEVFPRR--IPDEHYSVISDFHNSTVGHFGVEK-----TLGNIFQGGKKWKGMRKHVRQFIQQCPLCQKLRETHLAIKTRPFTTASYTPMEVLNVDTIGPVDPDEDGNTFILVIIDCFTRWVELFPTPDTSAKSAADALLQHVGRYGAPATLRSDQGSQFVNGIIEEFNKFALIQHEPTLAYSKEENAIVERANKEVMRHLRAIIYDQRSQKCWGKHQLP 494
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A3D2R4B9_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3D2R4B9_9PROT) HSP 1 Score: 283 bits (724), Expect = 3.210e-78 Identity = 167/439 (38.04%), Postives = 254/439 (57.86%), Query Frame = 2
Query: 794 FP-PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINL-ESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSD-------DSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSET----HQTIHQAMPSLPIDR*SEDPS---QSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
FP P T ++ +LGL NYFR+++ D + LR +V+ N ++++W F +++D + N P LFF + + + TDA + GIG Y++Q+ E KE+PI F S L G++L W+T EKEAYA++ ++ + LL D KFTI+TDHKNL Y+N +SS KV RWKMFLQ+F+FDL+H+ G+ N AD SRL + + Q + D DS+ ED RI+ ++ + + + ++R ER +T + + + + P + +D + P+ + PM+ LN+D IGP PKDE GN +ILV ID FSR+VEL +PD A T A+A L GR+G P + SD P++ + ++ +L+ L E T YS EEN++VERANKEV+RHL+A+V+D +++ WS
Sbjct: 240 FPLPITSGNLMSYLGLCNYFRENIKDYAKLEEPLRKMVKPNKLEKLIWLQNELDAFKKLKDEIYNMPLLFFIDDKLPIYLNTDACESGIGGYLYQVKEGKEVPIGFYSSKLRGSELQWNTYEKEAYAVYMSVCQFQYLLTDAKFTIKTDHKNLLYMNQNDSSNKVLRWKMFLQQFDFDLQHIPGKENIPADLASRLYEGETQRTINMASFQLANIHDETEMNHMDSI---EDIH-RIEYEKHDEIINQYHNSTVGHHGFERTMRLLKERAHKTWKGMRKNVREFINKCPHCQFMQDVQLKLKLIPYHVMTWRPMDRLNIDHIGPFPKDEQGNVYILVCIDVFSRFVELIPVPDREAVTTAKATLQWIGRYGTPYELLSDNAPEYLSNVMQELLKLADIEHLKTLPYSHEENSVVERANKEVVRHLKAIVFDKKLWPSWS 674
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A418RMC7_9GAMM (Uncharacterized protein n=1 Tax=Methylococcales bacterium TaxID=2304002 RepID=A0A418RMC7_9GAMM) HSP 1 Score: 276 bits (705), Expect = 2.090e-74 Identity = 167/440 (37.95%), Postives = 243/440 (55.23%), Query Frame = 2
Query: 800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIV-WSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQI-VEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRL-CYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSE-----------THQTIHQA-----MPSLPIDR*SEDPSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
PTT KQ+ FLGL +YFR H+ + LR+L+ R V WS E F+ +++ + CP LFFP + VVV TDASDYGIG Y+ QI E KE+PI F+SKSL + W+TIEKE +AI T+K HE LLRD +F ++TDH NL Y+N SQKV RWKM L ++FD+E+V G++N VAD FSRL C G + +++ E ++K + ++ + T VR +++ E Q + Q M + + E P+ + ++ ++Y +++N+DT+ +D G + +LV++D FSRWV+L+ + A TAA +LS+CG +G P+ IR+D G Q N L+ ++ + T +S EEN IVERANKEV+RHLRA +D V WS
Sbjct: 498 PTTAKQLRSFLGLTSYFRRHIRGYADLERPLRTLLNDTPAGRSVKWSEEARLAFVNLKEAINACPRLFFPDDQLPVVVYTDASDYGIGGYVCQIDAEGKEIPISFLSKSLSKVEQRWTTIEKECWAIIVTIKKHEYLLRDRRFLLKTDHHNLIYMNEPPSQKVMRWKMALLSYDFDIEYVKGEDNVVADTFSRLLCIHMDNTGTGEDSTIEHIATE-----PEQVTLPVRKIPEDKYTIIQSFHN--QTAGHRGVRATIDKLLEHKHKWQGMREHVRQFVRQCSCCQKMSVIKL----ETPTHA--YSLSSYKVGDMINIDTLTVGEEDADGFKHVLVIVDTFSRWVKLYPLRKLDAVTAASCILSYCGDYGSPLAIRTDNGRQLVNSLLKEIYEAGDIKMFVNTPHSHEENGIVERANKEVLRHLRAYCFDGEVRANWS 924
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A349AXA4_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A349AXA4_9ACTN) HSP 1 Score: 219 bits (558), Expect = 1.300e-55 Identity = 150/438 (34.25%), Postives = 217/438 (49.54%), Query Frame = 2
Query: 800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIK---QRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRL------CYSDATPAKGGPARQRSPSS--------DDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
P T Q+ FLG++NYFRD +P + L L K ++ W + ++ F + +A L + + + + TDA D G GA ++Q+++ ++ P+ F+S + A+ WST E+EA+A+ + + LL F + TDHKNL ++ + KV RW+ L E+NF++ H+AG +NPVADA SRL S + A +R P S DDSV E R + + G + K + + RPNL++ E I I +D +S P E ++D IGPLP DE GN +I+V ID FSR+V L D S + A LL G FG P IR+D G Q+ N LID L+G ++ T AY + N VER NKEV RHLR + D R N+WS
Sbjct: 496 PQTKTQLRSFLGMLNYFRDSVPMLGPTVVPLSRLAGPKGKGNFKKGEWQEQHQQAFEAAKAAIAGARLLSYLDYSVPIRLRTDACDIGAGAMLYQVIDGQDRPVSFMSHAFSAAERRWSTFEQEAFAVIKAITHWDSLLLGHPFVVETDHKNLCFLYKSDNPKVVRWRTRLSEYNFEVHHIAGIDNPVADALSRLHPVSISAASSVNALQVAGASKRIPGSTVERPAELDDSV--VETIRY-VHSEVAGHRGVKATV---DKLLRAGHNRPNLQQ--EVEYVIANCGFCQKIANRRQDDDKSQPRFSEIMDVGEEWSLDKIGPLPADEFGNTYIMVAIDGFSRFVVLEPASDASGESVARFLLKLVGWFGRPKGIRTDGGSQYDNHLIDVFCHLLGFDRHVTLAYRPQANGKVERVNKEVGRHLRFICLDRRFENKWS 925
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6B4R9_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B4R9_9EUKA) HSP 1 Score: 203 bits (517), Expect = 2.640e-50 Identity = 142/429 (33.10%), Postives = 212/429 (49.42%), Query Frame = 2
Query: 797 PPTTGKQMLGFLGLVNYFRDHL-PDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRK---GSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SED--PSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCG-RFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
PP+T + FLGLVN+F D+L D + L + + ++ W+ E + F + + + PTL ++ ++TDASDYG+G + Q +DK P++++SK+L GAQ W TIEKE YA+ Y L E+ LR FTI TDH NLT ++ ++ KV RW + L++F++D+ HV G N AD SR+C A S E+P K+ G L+ +R N + Q + + P+ + + P S T A PM+ L +DT+GP P D Q ILV++D FSR+VE+ I T+A AA +++H R GVP I +D G QF N +L + FT Y + N IVER N+E+ H+ A + + +RWS
Sbjct: 677 PPSTVSGVRSFLGLVNFFHDYLGSDFATISAPLYEITK---HKQFSWTHEAQSAFDTIISRLKSAPTLVHYNPRAKLKLITDASDYGVGGVLLQ--DDK--PLMYLSKALTGAQKRWPTIEKEMYAVVYCLSKAERYLRWAHFTIATDHHNLTRMHQSANAKVARWSLLLEQFSYDVIHVPGIANGAADGLSRVCT----------ALTNS---------EENPHAASIKEHHTLGGLHLSVNRTVQ--------QLRANGHAWPSMRQAVADVISHCPVCQKTVPTRPMSSFDLTLQAPFPMDTLCIDTMGPYPIDGEF-QHILVMVDLFSRYVEMTPIRSTTAEEAASCVVNHWFLRHGVPRRIITDSGSQFKNNTFARLCDRNAVDLHFTAPYHHQSNGIVERVNREINAHMMARRLEIKHLDRWS 1070
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6B8L3_9EUKA (Chromo (CHRromatin Organization MOdifier) domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B8L3_9EUKA) HSP 1 Score: 200 bits (508), Expect = 1.210e-49 Identity = 145/431 (33.64%), Postives = 217/431 (50.35%), Query Frame = 2
Query: 800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKF----TIRTDHKNLTYINLES--SQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPA-RQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSS-PFTRAAYL-PMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYD--DRVYNRW 2059
P + G +G NY +PD + L L + IK W+ E + E+ + VAN L FP + TDASD GIG + Q +E + F SK Q WST +KE YAI + + T L K T+ +DHKNL +++ S K+ RW++ L E+ F L HVAG++N VADA SRL P + RQ+ P +D R ++ GS L + +D +R+ E Q + PI + + +P ++ P+ + P EV+ +DTIGPLP+ HGNQ+++VVID FS++V+++ + T A AAE + CGR+GVP I++D+G QF NEL++Q+ + F+TAY N IVERAN ++R LR ++ + D + W
Sbjct: 234 PNNMTDLRGIIGKFNYLARFIPDCQ---RVLAPLYE--IKDMGQWTDEHDGIVRELAETVANAAALVFPDLTKPWQLYTDASDEGIGGVLLQGDPGEEQVVAFFSKKFSAVQGRWSTYDKELYAIVHCV-TQPDLAPLFKLHPDLTVCSDHKNLLFLHKRKDLSAKLERWRIILGEYPFRLRHVAGKDNVVADALSRL------PMETNLLDRQQIP---------DDARALLESLHGGS-AGHVPLAAMQDRAG--------DRWEEIRPFTRQWVEECPICQKAREPGRTRVPWHSTQHRQPFEVVQLDTIGPLPQSPHGNQYVVVVIDAFSKYVDVYPVKSTDAQGAAEVVARVCGRWGVPQTIQTDQGSQFRNELVNQVTTRLTLNHRFSTAYHPASNGIVERANGTLVRALRKLLLEAEDDQWEHW 634
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6EBJ6_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6EBJ6_9EUKA) HSP 1 Score: 189 bits (481), Expect = 2.120e-47 Identity = 134/418 (32.06%), Postives = 210/418 (50.24%), Query Frame = 2
Query: 800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSSP--FTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSH-CGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDR 2044
P + K M +G +NYFRDH+P G + + L Q + + E E+ +V+ L+A L + E +MTDAS G GA + Q + P+ F+SK+ Q WS EKEA+AI +K + L KFT+ TD +NL Y++ ++ KVRRW + + FD++HVAG +N AD SR+ +S S DD + G+ L++R + + R + S + +T+ + + + P+ + P SP A P + VDT+GP P + G +I V+ID SRW EL T+ A AA+AL+++ RFG P +++SD GP+F N+L ++ MG + TTA+ + N +VERAN++V+R L+A + R
Sbjct: 2 PKSVKGMQALVGFLNYFRDHVP---GFAEVVHPLTQAMASKIPLGGDEQEQALRKVKTLLAQAEALAIFDASKEHTIMTDASGLGYGAVLLQ----EGQPVCFMSKAFDQVQSRWSVGEKEAFAIVAAIKRWNKYLSWGKFTLLTDDRNLIYMHKSTNAKVRRWAEAMSDMVFDVKHVAGLDNGGADGLSRVYV------------MQSASEDD---------VEAEHLTAGAHLSRRVV----------TERLKDQGKSVSRETVSKVIENCPVCQVIRRPPVDSPSGLHTAVDRPFRRVAVDTMGPFPSVD-GKAYITVMIDMCSRWTELVASSSTTGAAAADALVNNWILRFGCPEVLQSDGGPEFKNQLFKRIADEMGFKIHITTAHHPQSNGMVERANQQVLRILKARKFQLR 380
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6AS69_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AS69_9EUKA) HSP 1 Score: 193 bits (491), Expect = 6.390e-47 Identity = 127/424 (29.95%), Postives = 207/424 (48.82%), Query Frame = 2
Query: 800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSSPFTR---AAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVY-NRW 2059
PT ++ LG+VNYFR +P + + +L + + W+ E + F E+R + + L P ++ + TDASD GIG + + LP+ F SK+L Q WSTIE+E +A+ + + L FT TDH+NL ++ ++ KVRRW++ + ++F + HVAG++N AD SRL RQ SS + +G K + +R + Q + + + P + + P++ P+ AA P V+ +DT+GPLP G ++I+V +D F+++ +L+ T+A +A EAL+ FG P I+SD G Q+ NEL+ L ++T Y N IVERAN E++RHLR +++D+R+ +RW
Sbjct: 708 PTNISEVRTLLGMVNYFRPTIPTFADIAEPIIALTRADTP--FAWNSEQQAAFDELRRQLTSGTILTHPRPGDDLHLFTDASDIGIGGVLMVKRDTTFLPVQFFSKTLSATQRRWSTIEQEMFALVSAIDKFSKYLMASHFTAHTDHRNLVWMATSTNPKVRRWRLAVDIYDFTVLHVAGKDNGCADTLSRLLTLSVED------RQEIISS-------------VHGGTEGHLGYKETV---------RRIRDQYSGWRGMVQDVREFITHCPTCQ-LQRPNRPPPYQHHRTAATEPFGVVQLDTLGPLPISPEGFKYIIVAVDTFTKFTKLYPARTTNADSAVEALIDWSAHFGRPREIQSDNGSQYRNELVALLTAAYSIPHHYSTPYRPASNGIVERANAEIVRHLRTLLHDNRMATDRW 1100
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6B2I5_9EUKA (WD repeat-containing protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B2I5_9EUKA) HSP 1 Score: 187 bits (474), Expect = 5.780e-45 Identity = 147/474 (31.01%), Postives = 224/474 (47.26%), Query Frame = 2
Query: 800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVED-KELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLES-SQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQ-RSPS---SDDSV**TEDPR--------------------CRIQKDRKGSQLAKRALWS*EDT*SPAS---------VRPNLERYSETHQTI-------------------HQAMPSLPIDR*SEDPSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRW 2059
PTT K+M F+G+V +FR P + L + + ++ WSPELE+ F+ V+ V L N ++++ TDASD G+G + +D +E + S++ HGA+ W+T EKEA+AI ++ L+ FTI TDHKNLTY+ ++ S KV RW++ LQEF+F + H+ G++N VAD SR +A A P R R P+ DD V + +D ++ +R L + E T S + +L RYS T++ + H + L S D Q T P + + +DT+ P+ E G Q+++ VID F+R+VE++ D SAA+AA+A+ G G + SD G +F NE I LV G+ Q T Y N ERAN+ +++ LRAMV + +W
Sbjct: 405 PTTRKEMRRFIGMVGWFRRFCPKLGEHLAPLNDTLT---QAKVTWSPELEEAFVNVQRGVKAHIKLNHIDYNEDLILRTDASDVGLGGMLCNRTQDGQEAVVAVYSRAFHGAEKRWTTGEKEAFAIVECIRKWRMYLQGYTFTIETDHKNLTYMEQKTASAKVLRWRLALQEFDFHVIHLPGESNVVADTLSRN-LPEAKAAATRPRRHTRRPNRLGDDDFVQIADSEEDTSAEXXXXXXXXXXXXXXXADFTQDAAEARDRERQLATGEMTEERKSEAVTRAHKGMAQHLGRYS-TYRALKEKGYVWRGMWEDVKSFVDHCSCQKLA----SVDQLQLRMGTHMVETPFQKVAIDTLKITPEAESGAQYVVTVIDVFTRYVEIYPSVDKSAASAADAITRWIGNHGPMTTLHSDNGREFINETIAALVARFGTGQSKTFPYHPPSNGGCERANRRILQRLRAMVLEWGEAEQW 869
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A391NS33_9EUKA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Kipferlia bialata TaxID=797122 RepID=A0A391NS33_9EUKA) HSP 1 Score: 179 bits (453), Expect = 1.350e-44 Identity = 103/285 (36.14%), Postives = 164/285 (57.54%), Query Frame = 1
Query: 1 IRQLCSEFRDIFSVTVKSDPARVPAMDLKVNSDKWHTNKNRGPPRPQSEVRRAAIEKTVKKYLDLGVIEPSQATEYSQVHLVPKGEPNDWRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFP-PNYGKTNAGLLGPSELFQ 852
IRQ+ +++ D+FS + + PA+ +++ SD + GPPR S R ++ ++K L+ G I SQ+ S + +V K + WR C+DY +LN T + S+P+P +++ + KK VF ++D+TSGYHQAP+S ES A +AF G+Y ++R+P GL NA Y+QR M V L G+LY C +++DD+ +FG D EF++NL+ VF R ++L PKKC LG V +VG ++ EGI + + +L+ P K +G + F+
Sbjct: 97 IRQIVAKYSDLFSAKLGAKPAKWSPFKIELTSD----DPVGGPPRRLSPPLRREVQAQIEKLLEAGAIRESQSPYSSPLVMVRKKD-RTWRMCVDYRKLNAITRRM-SFPLPRTQELLDLLAHKK--VFAIVDLTSGYHQAPISEESIAKTAFATPDGLYEFVRLPFGLCNAPSYYQREMQRV-LVGLLYKACLVFVDDIVIFGETDEEFLENLERVFARLLANRLTLKPKKCTLGAPKVVYVGMAVSKEGIQIDKSRIQGILDMTEPRDKKQLRSFMGLTNYFR 372 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1626.1.1 >prot_P-littoralis_Contig1626.1.1 ID=prot_P-littoralis_Contig1626.1.1|Name=mRNA_P-littoralis_Contig1626.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp MDLKVNSDKWHTNKNRGPPRPQSEVRRAAIEKTVKKYLDLGVIEPSQATEback to top mRNA from alignment at P-littoralis_Contig1626:884..3609- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1626.1.1 ID=mRNA_P-littoralis_Contig1626.1.1|Name=mRNA_P-littoralis_Contig1626.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2726bp|location=Sequence derived from alignment at P-littoralis_Contig1626:884..3609- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1626:884..3609- >mRNA_P-littoralis_Contig1626.1.1 ID=mRNA_P-littoralis_Contig1626.1.1|Name=mRNA_P-littoralis_Contig1626.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig1626:884..3609- (Pylaiella littoralis U1_48)back to top |