mRNA_P-littoralis_Contig1620.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 136 bits (343), Expect = 4.270e-36 Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 1
Query: 1 AAHLRVFSFSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRLSTD 285
A H +F ++YHPE NAIER WG +K+IERRVCDYSV S+L RLP TLS+++LSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HR TD
Sbjct: 368 AGHACIF-LAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTD 461
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.050e-35 Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 1
Query: 1 AAHLRVFSFSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRLSTD 285
A H +F ++YHPE NAIER WG +K+IERRVCDYSV S+L RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HR TD
Sbjct: 1009 AGHACIF-LAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTD 1102
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 136 bits (343), Expect = 2.200e-35 Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 1
Query: 1 AAHLRVFSFSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRLSTD 285
A H +F ++YHPE NAI+R WG +K+IERRVCDYSV S+L RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HR TD
Sbjct: 561 AGHACIF-LAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTD 654
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.690e-29 Identity = 53/76 (69.74%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 58 ERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRLSTD 285
+R WG +K+IERRVCDYSV S+L RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HR TD
Sbjct: 256 QRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTD 331
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 104 bits (259), Expect = 4.240e-24 Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 AAHLRVFSFSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATG 222
A H +F ++YHPE NAIER WG +K+IERRVCDYSV S+L RLP TLS++SLSL RKWAR+SWLY+ AY+ G
Sbjct: 444 AGHACIF-LAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A2I1GI64_9GLOM (Uncharacterized protein n=11 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1GI64_9GLOM) HSP 1 Score: 78.2 bits (191), Expect = 8.590e-15 Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 25 FSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHR 273
+ ++H ECN IER WG +K RR+C Y+ ++ R+P L S+ ++ IRK+AR SW Y++AY GL+G + K+ SHR
Sbjct: 506 YPKFHCECNFIERFWGFAKRETRRICSYNFADLMKRVPEVLVSVPITTIRKFARKSWRYMDAYDKGLEGRTAEWAVSKYKSHR 588
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A1Y2GP19_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GP19_9FUNG) HSP 1 Score: 75.5 bits (184), Expect = 1.200e-14 Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 13 RVFSFSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHR 273
++ + +YH E N IE WG SK R CDY+ K + +PA L+S+++ IRK+AR S+ Y++AY GL G + KK+ SHR
Sbjct: 119 QIIFYPKYHCELNFIEMFWGASKRYTRANCDYTFKGLQETIPAALASVTILSIRKYARRSFRYMDAYRKGLSGRVAELQAKKYKSHR 205
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A2N1N172_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1N172_9GLOM) HSP 1 Score: 76.3 bits (186), Expect = 3.980e-14 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 25 FSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHR 273
+ ++H ECN IER WG +K RR+C Y+ ++ ++P L S+ ++ IRK+AR SW Y++AY GL+G + K+ SHR
Sbjct: 411 YPKFHCECNFIERFWGFAKRETRRICSYNFAELMKQVPEVLVSVPVTTIRKFARKSWRYMDAYDKGLEGRTAEWAVSKYKSHR 493
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: A0A1E3Q3R2_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3Q3R2_LIPST) HSP 1 Score: 70.5 bits (171), Expect = 1.160e-13 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 25 FSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYA-----TGLDGYMQYRDLKKWTSHR 273
+ R+H ECN IERVWG +K R CDYS S+ R+P L ++ + IRK+AR SW ++EAY + L G +K + SHR
Sbjct: 2 YPRFHCECNFIERVWGETKRRARLDCDYSYSSLKQRVPVILDTIPVEKIRKFARRSWRFIEAYTRKDNGSCLGGRKAAYIVKTYKSHR 89
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Match: U9TZ17_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9TZ17_RHIID) HSP 1 Score: 70.5 bits (171), Expect = 3.980e-13 Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 13 RVFSFSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHR 273
+V + ++H N IE+ WG +K R CDY+ K + +P L+S+ L IRK+AR SW +++AY GL G +KK+ SHR
Sbjct: 71 KVIFYPKFHCGLNFIEQFWGAAKQFMRNNCDYTFKGLEKMVPDALNSVPLIQIRKYARRSWRFMDAYKKGLKGIEALYAVKKYKSHR 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1620.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1620.2.1 >prot_P-littoralis_Contig1620.2.1 ID=prot_P-littoralis_Contig1620.2.1|Name=mRNA_P-littoralis_Contig1620.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=97bp AAHLRVFSFSRYHPECNAIERVWGRSKAIERRVCDYSVKSVLNRLPATLSback to top mRNA from alignment at P-littoralis_Contig1620:6751..7041+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1620.2.1 ID=mRNA_P-littoralis_Contig1620.2.1|Name=mRNA_P-littoralis_Contig1620.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=291bp|location=Sequence derived from alignment at P-littoralis_Contig1620:6751..7041+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1620:6751..7041+ >mRNA_P-littoralis_Contig1620.2.1 ID=mRNA_P-littoralis_Contig1620.2.1|Name=mRNA_P-littoralis_Contig1620.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=291bp|location=Sequence derived from alignment at P-littoralis_Contig1620:6751..7041+ (Pylaiella littoralis U1_48)back to top |