mRNA_P-littoralis_Contig16.93.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig16.93.1
Unique NamemRNA_P-littoralis_Contig16.93.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: D7FSQ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ9_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 3.160e-142
Identity = 209/273 (76.56%), Postives = 235/273 (86.08%), Query Frame = 1
Query:   10 SLTPRKKK----ADDGPVRTLSMTPTKKKRGAFGRT-GVPMKDRIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSSNDANGIDVSKHNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRRRNVEAGLKVERIIEVDPFFAEGVRL 813
            S TP KKK    A +GPVRTLSMTPTKKKRGAFGR  G PMK R+ VP +V++VY+++ K TGNIGGNGSDGAIYGELTVGGMQKV+NVLKE  GFDE SSFIDVG+GLGKPNFHVAQDPGVEISYGLELE VRW+LSIANHR VL     NG+ V+KHNLFFA GDILGCETFDPFTHVYMFDIGFPP+TL +IA+KFN+S+ARHLVSYQ P+KV +VY FDV++V Q  L LTGSGEG TMYL+RR+NVE GLK+ERI EVDPFFAEGV+L
Sbjct:  146 SATPSKKKKTEAALEGPVRTLSMTPTKKKRGAFGRKDGTPMKARVDVPEEVSRVYAIVAKATGNIGGNGSDGAIYGELTVGGMQKVVNVLKEHTGFDEMSSFIDVGAGLGKPNFHVAQDPGVEISYGLELEVVRWELSIANHRMVLQDEGDNGVHVAKHNLFFARGDILGCETFDPFTHVYMFDIGFPPATLHEIAKKFNNSKARHLVSYQVPKKVIDVYGFDVDLVLQQPLSLTGSGEGHTMYLFRRKNVEPGLKIERIDEVDPFFAEGVKL 418          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: A0A7S4QC13_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QC13_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.940e-70
Identity = 119/233 (51.07%), Postives = 150/233 (64.38%), Query Frame = 1
Query:   70 PTKKKRGAFGRTGVPMKDRIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVL----------SSNDANGIDVSKHNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRR 738
            P  KKR AFG T V   + I  PA V +VY ++ + TG+IGGNG  GAIYGELTVG MQK++N++K   G DENS FIDVG GLGKPN HVAQDPGV+ SYG+E+E VRW L ++N  +VL          S  D +G  +  H    A GDI   + FDPFTHVYMFDIGFPP    ++A  FN S + +L+ Y  P+ + E Y FD+ ++ QLS  + GS EG   Y+YRR
Sbjct:  164 PIAKKRNAFGHTAV---NAITYPANVKRVYQVVNRQTGSIGGNGHGGAIYGELTVGSMQKMVNMMKVHTGLDENSRFIDVGCGLGKPNMHVAQDPGVQFSYGIEMEHVRWLLGMSNLDQVLREAQRQDRGGSVLDVSGNSIIGHRCTLAHGDITEAQFFDPFTHVYMFDIGFPPRLFYQLADMFNRSSSPYLICYHGPKLMVERYGFDIELIIQLSTSMHGSSEGHMGYIYRR 393          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: A0A1Z5J7B9_FISSO (DOT1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7B9_FISSO)

HSP 1 Score: 216 bits (550), Expect = 3.850e-65
Identity = 113/250 (45.20%), Postives = 154/250 (61.60%), Query Frame = 1
Query:   70 PTKKKRGAFGRTGVPMKDRIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSS--------NDANGIDVSKHNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRRRNVEAGLKVERIIEVDPFF 795
            P  KK+  FGR    + D I +   V KVY +++K+TG+IGGNGS G IYGELT+  MQKV+N++K+   F+ NS FIDVGSG+GKPN HV QDPGV++SYG+E+E+ RW L +   + VL +        ++A   ++  H   F  GDI    +F+PFTHVYMF IGFPPS    +A  +N S + +L+ Y  P+ + + Y FDV ++ Q    + GS EG T+YLYRR     G   E I   DP F
Sbjct:   77 PKAKKKLIFGR----LVDEINIQPNVRKVYGIIRKLTGSIGGNGSHGPIYGELTMSSMQKVVNLMKQHMNFNSNSKFIDVGSGIGKPNLHVCQDPGVKLSYGIEIEQARWILGMTCLKGVLDAAVKEEKDIDEAYDDEIILHRCVFECGDIRSANSFNPFTHVYMFSIGFPPSLWIHLAAMWNSSDSPYLICYHGPKDIIDSYEFDVVLIAQAPTSMHGSKEGHTVYLYRR-TTHTG---EEITSCDPLF 318          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: B8BQJ6_THAPS (DOT1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQJ6_THAPS)

HSP 1 Score: 217 bits (552), Expect = 4.520e-65
Identity = 115/245 (46.94%), Postives = 153/245 (62.45%), Query Frame = 1
Query:  127 IAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVL--SSNDA-NGIDVSK-----HNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRRR-------NVEAGLKVERI-IEVDPFFAEGVRL 813
            I +P  V++VY+++ K TG+IGGNG  GAIYGEL VG MQK+ N++ E  G + NS FIDVG GLGKPN HVAQ PGVE SYG+E+E VRW L IAN  +VL  +  DA N  ++S+     H  + A GDI     FDPFTHVYMFDIGFPP    ++A+ FN S++ +L+ Y  P+ + E Y FD+ ++ Q    + GS E  T Y+YRR          + G K ++  +  DP FA+   L
Sbjct:  109 IDIPTNVSRVYNIVNKHTGSIGGNGHGGAIYGELRVGSMQKMTNLMMEHTGLNVNSRFIDVGCGLGKPNLHVAQHPGVEFSYGIEMENVRWMLGIANLHQVLEQAKRDAVNDEEISEDAKIGHACYLAHGDITEANFFDPFTHVYMFDIGFPPLLFHQLAEMFNSSESEYLICYHGPKLMIETYEFDIELLVQTPTSMHGSSEVHTGYIYRRTAENKRKSKKQTGCKSKKYGVPCDPLFAKAWEL 353          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: A0A2D4CG97_PYTIN (DOT1 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG97_PYTIN)

HSP 1 Score: 211 bits (538), Expect = 8.250e-64
Identity = 110/245 (44.90%), Postives = 149/245 (60.82%), Query Frame = 1
Query:  142 KVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSSNDANGIDVSKHN---LFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRR-----------RNVE----------AGLKVERIIEVDPFFAEG 804
            +V +VY  ++K TG +GGNG+ GAIYGE+T    Q+V++ +K      E S F+DVGSGLGKPNFHVA DPGVE+SYG+ELE++RWQLS+ N + V+      G+D +K+      F  GDI    T +PF+HVY FD+GFPP  +  +AQ FN S A++LVS+  PRK+ EVY FDV  + +++  + GS EG T Y YRR           RN E          A    E ++ +DP F  G
Sbjct:   17 EVTEVYRAIRKKTGALGGNGAGGAIYGEITQNSFQRVVDYMKTHCELSERSLFLDVGSGLGKPNFHVAIDPGVEVSYGIELEELRWQLSLHNLKSVM------GLDANKNKESRTIFTAGDITHAHTLNPFSHVYRFDVGFPPDVMESMAQIFNRSDAKYLVSFHAPRKIIEVYEFDVENIGRVATSMAGSSEGHTCYFYRRCESSAMDTVSPRNKENTKRRRTSNAAATSNEELLHIDPLFRPG 255          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: A0A7S2PSU5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSU5_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.070e-63
Identity = 113/232 (48.71%), Postives = 144/232 (62.07%), Query Frame = 1
Query:   76 KKKRGAFGRTGVPMKDRIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSSNDAN---------GIDVSK--HNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRR 738
            K+ +  FG      K  I VP  V +VY ++ K TG+IGGNG  GAIYGELTVG MQK+ N++ E     + S FIDVG GLGKPN HVAQ PGVE SYG+E+E VRW L +AN  +VL +   +         G D SK  H  FFA GDI     FDPFTHVYMFDIGFPP    ++A+ FN+SQ+ +L+ Y  P+ + + Y F+V ++ Q    + GS EG   Y+YRR
Sbjct:  132 KRSKSPFGN-----KSTIKVPTNVKRVYEIINKHTGSIGGNGHGGAIYGELTVGSMQKMTNLMIEYTDLSKESRFIDVGCGLGKPNLHVAQYPGVEFSYGIEMEHVRWMLGMANLDQVLKAAQKDIAFEEAKKDGDDGSKIEHRCFFAHGDITEASFFDPFTHVYMFDIGFPPRLFHQLAEMFNNSQSEYLICYHGPKLMIDRYEFNVELLVQTPTSMHGSAEGHQGYIYRR 358          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: A0A0P1A7P9_PLAHL (DOT1 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7P9_PLAHL)

HSP 1 Score: 212 bits (539), Expect = 3.220e-63
Identity = 119/293 (40.61%), Postives = 170/293 (58.02%), Query Frame = 1
Query:   22 RKKKADDGPVRTLSMTPTKKKRGAFGRTGVPMK------------DRIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSSNDANGIDVSKHNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRR----------RNVEAGLKVERI-------IEVDPFFAEGVRL 813
            RK+K+ +  +++ + TP   K+ A    G P K            +R     +V++VY  ++K TG++GGN + GAIYGE+T    Q+V++ LKE     E+S FIDVGSGLGKPNFHVA DPGV++SYG+ELE++RW LS+ N R VLS        VS     F  GDI    TF+PF+HVY FD+GFPP  + K+A  FN S A++  S+  PRKV ++Y F V  + +++  + GS EG   Y YRR          +N +   +V  +       I+VDP F++G+ L
Sbjct:   22 RKRKSQNTKLKSNAATPVSNKKRARLSIGTPGKVTPLADIREREVERTFTEHEVSEVYKAIRKQTGSLGGNAAGGAIYGEITQASFQRVVDYLKEFCELSESSRFIDVGSGLGKPNFHVAVDPGVQLSYGIELEELRWHLSLHNLRSVLSLESQRLKPVST---VFTAGDITHAHTFEPFSHVYSFDVGFPPDVMDKMALMFNRSSAKYYASFHAPRKVVDMYGFAVENIGRVATSMAGSSEGHQCYFYRRLASTGGDKKVKNDKVEAQVSSVSNDINSWIDVDPLFSKGIEL 311          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: K0R0G2_THAOC (DOT1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0G2_THAOC)

HSP 1 Score: 213 bits (541), Expect = 5.250e-63
Identity = 111/253 (43.87%), Postives = 156/253 (61.66%), Query Frame = 1
Query:   97 GRTGVPMK---DRIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVL---SSNDANGIDVSK----HNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRRRNVEA---GLKVERI-IEVDPFFAEGVRL 813
            G+T +P      +I +P  V++VY ++   TG++GGNG  GAIYGELT G MQK+ N++ +    D+ S FIDVG GLGKPN HVAQ PGVE SYG+EL   RW L ++N ++V+    S+  NG D       H L+FA GDI     FDPFTHVYMFDIGFPP+   ++A+ FN+SQ+ +L+ Y  P+ + E Y F++ ++ Q    + GS E  T Y+YRR    A     K +++ +  DP FA+   +
Sbjct:  128 GKTKLPFGRNVKQIEIPRNVSRVYKIVHSQTGSVGGNGHGGAIYGELTTGSMQKMTNLMMKHTNLDKTSRFIDVGCGLGKPNLHVAQYPGVEFSYGIELYHTRWMLGMSNLQQVMVAAMSDFENGKDKGDEAIGHRLYFAHGDITEATHFDPFTHVYMFDIGFPPTLFHQLAEMFNNSQSEYLICYHGPKLMIEDYGFNIELIVQTPTSMHGSSEVHTGYIYRRSETAAEAKSCKTKKLGVLCDPLFAKAYEM 380          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: A0A7S2YHF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHF8_9STRA)

HSP 1 Score: 214 bits (546), Expect = 5.600e-63
Identity = 118/248 (47.58%), Postives = 154/248 (62.10%), Query Frame = 1
Query:   79 KKRGAFGRTGVPMKDRIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSSNDANGIDVSKHNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRRRNVEAGLKVERIIE-----VDPFFAEGV 807
            K+R  FGR        I V  +V KVY L++K+TG+IGGN S+G IYGELT+G MQK++N++KE   FD +S FIDVGSG+GKPNFHVAQDPGVEISYGLE++  RW LS+   R  L    A   DV +H   F   DI    +FDPFTHVYMF IGFPP     +A  +N S++ +L+ Y  P+ + + Y F+V ++ +    + GS EG T Y+YRR    +    E   E     VDP FA G+
Sbjct:  227 KRRIVFGRYS-----EIDVTERVKKVYRLIRKLTGSIGGNASNGPIYGELTMGSMQKMVNLMKEHTHFDASSKFIDVGSGIGKPNFHVAQDPGVEISYGLEIDADRWLLSMNCLRGTLDLA-AQDEDV-QHRCVFVQEDIRQAHSFDPFTHVYMFSIGFPPDLWITLADVWNRSKSPYLICYHSPKDIIDCYEFEVELLAKTPTSMHGSKEGHTGYVYRRTTSASTTAAESSTETTVERVDPLFAGGI 467          
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Match: M4B4B3_HYAAE (DOT1 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4B3_HYAAE)

HSP 1 Score: 211 bits (537), Expect = 1.650e-62
Identity = 114/276 (41.30%), Postives = 164/276 (59.42%), Query Frame = 1
Query:   76 KKKRGAFGRTG--VPMKD-------RIAVPAKVNKVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSSNDANGIDVSKH---NLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDSQARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRRRNVEAG----LKVERIIEV--------------DPFFAEGVRL 813
            K+ RG+ G  G   P+ D       R     +V+++Y  ++K TG++GGN + GAIYGE+T    Q+V++ LK+     E+S F+DVGSGLGKPNFHV+ DPGV++SYG+ELE++RW LS+ N R VLS      +D  +H   +  F  GDI    TF+PF+HVY FD+GFPP  + K+A+ FN S A++ VS+  PRKV E Y F V  + +++  + GS EG   Y YRR  V  G    ++ E  +E+              DP F++G+ L
Sbjct:   72 KRTRGSIGTPGKVTPLADVREKEIHRTFTDHEVSEIYKAIRKQTGSLGGNAAGGAIYGEITQASFQRVVDYLKDNCELSESSCFVDVGSGLGKPNFHVSVDPGVQVSYGIELEELRWHLSLHNLRSVLS------LDSQRHKPLSTVFTAGDITHAHTFEPFSHVYTFDVGFPPDVMDKMAEMFNRSSAKYFVSFHSPRKVVETYGFSVTNIGRVATSMAGSSEGHQCYFYRRVAVIEGESEFVREEVTVEMAPLNDSVICPPLTEDPLFSKGIEL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.93.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ9_ECTSI3.160e-14276.56DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S4QC13_9STRA2.940e-7051.07Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5J7B9_FISSO3.850e-6545.20DOT1 domain-containing protein n=2 Tax=Fistulifera... [more]
B8BQJ6_THAPS4.520e-6546.94DOT1 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A2D4CG97_PYTIN8.250e-6444.90DOT1 domain-containing protein n=1 Tax=Pythium ins... [more]
A0A7S2PSU5_9STRA3.070e-6348.71Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A0P1A7P9_PLAHL3.220e-6340.61DOT1 domain-containing protein n=1 Tax=Plasmopara ... [more]
K0R0G2_THAOC5.250e-6343.87DOT1 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S2YHF8_9STRA5.600e-6347.58Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
M4B4B3_HYAAE1.650e-6241.30DOT1 domain-containing protein n=1 Tax=Hyaloperono... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:363900..368662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSQ9
PFAMsDOT1
Model size814
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue5.18e-143
EggNOG OGs2AVA3@1|root,2RZVU@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-03_002870.1
DescriptionHistone methylation protein DOT1
Cds size813
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.93.1prot_P-littoralis_Contig16.93.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig16 363900..368662 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789766.7211125-CDS-P-littoralis_Contig16:363899..3639321680789766.7211125-CDS-P-littoralis_Contig16:363899..363932Pylaiella littoralis U1_48CDSP-littoralis_Contig16 363900..363932 -
1680789766.732174-CDS-P-littoralis_Contig16:364432..3645121680789766.732174-CDS-P-littoralis_Contig16:364432..364512Pylaiella littoralis U1_48CDSP-littoralis_Contig16 364433..364512 -
1680789766.7438335-CDS-P-littoralis_Contig16:365037..3651341680789766.7438335-CDS-P-littoralis_Contig16:365037..365134Pylaiella littoralis U1_48CDSP-littoralis_Contig16 365038..365134 -
1680789766.7574377-CDS-P-littoralis_Contig16:365538..3655911680789766.7574377-CDS-P-littoralis_Contig16:365538..365591Pylaiella littoralis U1_48CDSP-littoralis_Contig16 365539..365591 -
1680789766.7666438-CDS-P-littoralis_Contig16:366285..3664101680789766.7666438-CDS-P-littoralis_Contig16:366285..366410Pylaiella littoralis U1_48CDSP-littoralis_Contig16 366286..366410 -
1680789766.7786903-CDS-P-littoralis_Contig16:367027..3671851680789766.7786903-CDS-P-littoralis_Contig16:367027..367185Pylaiella littoralis U1_48CDSP-littoralis_Contig16 367028..367185 -
1680789766.792486-CDS-P-littoralis_Contig16:367544..3676121680789766.792486-CDS-P-littoralis_Contig16:367544..367612Pylaiella littoralis U1_48CDSP-littoralis_Contig16 367545..367612 -
1680789766.8074777-CDS-P-littoralis_Contig16:368220..3683531680789766.8074777-CDS-P-littoralis_Contig16:368220..368353Pylaiella littoralis U1_48CDSP-littoralis_Contig16 368221..368353 -
1680789766.8183703-CDS-P-littoralis_Contig16:368596..3686621680789766.8183703-CDS-P-littoralis_Contig16:368596..368662Pylaiella littoralis U1_48CDSP-littoralis_Contig16 368597..368662 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig16.93.1

>prot_P-littoralis_Contig16.93.1 ID=prot_P-littoralis_Contig16.93.1|Name=mRNA_P-littoralis_Contig16.93.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=271bp
REGSLTPRKKKADDGPVRTLSMTPTKKKRGAFGRTGVPMKDRIAVPAKVN
KVYSLLQKVTGNIGGNGSDGAIYGELTVGGMQKVINVLKEEAGFDENSSF
IDVGSGLGKPNFHVAQDPGVEISYGLELEKVRWQLSIANHRKVLSSNDAN
GIDVSKHNLFFAMGDILGCETFDPFTHVYMFDIGFPPSTLRKIAQKFNDS
QARHLVSYQDPRKVTEVYNFDVNVVCQLSLKLTGSGEGKTMYLYRRRNVE
AGLKVERIIEVDPFFAEGVRL
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mRNA from alignment at P-littoralis_Contig16:363900..368662-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig16.93.1 ID=mRNA_P-littoralis_Contig16.93.1|Name=mRNA_P-littoralis_Contig16.93.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4763bp|location=Sequence derived from alignment at P-littoralis_Contig16:363900..368662- (Pylaiella littoralis U1_48)
CGGGAGGGCAGCTTAACGCCTCGAAAGAAGAAGGCGGACGACGGACCAGT GCGCACTCTGTCGATGGTGGGTTGGTCTGTGTGTGTGTTTGCGTTGTTGT TATCGTTGTTGTTCTTGTTGTTCTTGTTTTTGTTCTTGTTGTTGTTGTTG TTGTCGACGACGACAGTTATGATGATGTTTGAAACCTCATTGTTGTTCAA GGTAGCGGTGTTAATGCTGTTGTTGTTAACGTCTCTGCTGCTTCTGTTGT TGTTGTCGTTGTTGTCGTTGTTGTCGTTGTTGATGATGTTGTTGGTGTTG TTGTGCCAGACGCCTACGAAGAAAAAGAGGGGGGCGTTCGGCCGGACTGG GGTTCCCATGAAGGACAGGATTGCGGTACCAGCGAAGGTCAACAAGGTGT ACTCCTTGTTGCAGAAGGTCACCGGGAACATCGGCGGCAACGGTGAGACA TGTGTAGAGACACAAGGAATACAGAGACAGGCGGGTGATCGATGGTTAGA TAGACGGAGATACGAGAGTGAGGGGGGGGGGCGTATTTCTTCATCGTCAG CTCTGCTGGAGTGATGAGACAGCGAGAGGCACGTGCAACACATGGAGATA CCGCATGCGACTGGAGTTACGTTTTATGTGGGGGGGAAACTGCTTGAGAT TTCAGAAAAGTTGTTCACCGTAGTACCGTTGGGTACTTCGTGTGAACTAT TAAAAAATGCGTATGGCGAGACCCCCGTACAGGTATCATACTTGCTGTAC ACTTTGCAAAGCTGTATGAAGCAAGAAGTGCGACGGTACCCTAAACAGAG CGACATCGGAAGCATTTCGTCCAGCTTCCCGAAAGAAAAGGGGCATTGTA TTTGGCATCGGCCGCCAACTTTTGCTGTGGAGAAACTCATGTTTGGAAAA AATGGTCTAAACGTTGGGGGTGTGACATAACACGCCACCTTCTCTCTTGG TGTGGTGAGTGTTGATTGCCATTGTTCTTCTTCTTGTCAAGAAAATATAG TATGCTGTTTCCTTTCGTGCGGGGGGTGCTGCAATGGTTGGTGTGCTCAG GGAGCGACGGAGCAATCTACGGAGAGCTCACGGTTGGCGGTATGCAGAAG GTCATCAACGTTCTCAAGGTGTGTGTGTATGTATGCATGCATGCATATGA TATTCGTATGTATGCGAATGCTATGACATCGTATCTACGCGCGTGGCTGG GTGTAAGGCTGGTGGCTTTGAAAGAAGCAAACAGGAGCAGCCTTGCTGTG TTCGATCCGTTCCAAATTTTGATGGTTTTGTTTTTTCACAACAACAATTT CGGTGCGTTTTTGTTTTTGATGGTATGTGTGTATCCAGATTCTCTGTCCT CTTCTCTCTTTTCCCTGCTCTCTTTCTTGTTTCTCGTCCTTTGGTCCCCG AAGAGCTTCTCCCGTTTTTTTTTTTACTTCCTACGTTTCTCCTCGCGAAC GGACTTTTTTTCCATCATTTTCTGTAGGAGGAGGCGGGTTTCGACGAGAA CTCGAGCTTTATCGACGTGGGGTCAGGTCTCGGGAAGCCCAACTTTCACG TGGCGCAGGACCCGGGGGTGGAGATATCCTACGGGCTTGAGCTGGAGAAG GTTCGGTGGCAGCTGAGCATCGCCAACCACCGAAAGTGAGATGAGACGAT GGAGAGGTGTGGAGGTGGTGTGGTACGTGGTAGATGATGCTGCGGCGCAC GTCGGACGCGCTACAGGTACATGGGCGCGACACGGCGCATGCGGTGCACG CATTCGAGAGACAGATTCATGCAAAAGTTGTCTTCCGAGATAGAGAAGGG AGATGAGTGAATGCTCACGTGGGGGACACGAAAGAGGGTGCCCATAGCAT TCGTGGACCTTGCCACACATGGTGAAGGTATCGGCGAAACCATGCAAGAG TAAAATATGTCAGGGTGCGATCGGCGCTGAAACGTCACATCATAAAAGTG CTGTGTTTGTGAAAACCCGAACGGGGTTCTGGTACTTCCGTGCCGTCAAA CTTTGTCGGTTTTGCGTGTTTGCTGCCTCTCTTTGGTTGTTCCGGAGGCA TTTTTTTTTATGCCAAATCTCTTCCCGATTTTATCTCTACAAACACGATG TTTATACGACGACCGGTCTCTTGCACCCTGCACTGATATAAACTGTCCAT TGCCTTGCTTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGTGCGTGTG TTTGTGTTTGTGTTTCATCGCTGTTCTTGTTCTTGGTGTCGTTGTTGTGA AGGGTACTTTCATCCAACGATGCGAACGGGATTGACGTGTCCAAGCACAA TCTCTTCTTCGCCATGGGTGACATCCTCGGCTGCGAGACCTTCGACCCCT TCACCCACGTCTACATGTTCGACATCGGTGCGTGGCTTAGACCGTTGTTT CGTTATTTTGGGTTGATTTGTTGGTTCGCACCGCTCGCTGACGGCGAAAT GGAGGGGGCTTTGGCTTTTAGCTCACGGCGTTGTTGTCATGGTCCTAAAT CATTCCGGGTGACGTTTTCTCGTGTGTGCGTGCGTGGGTCTGCGAGCAGG AGCTGTAATGTGTTCCTGGTCTTCAACAGCAGAGGTTCCGTGATCGCGTC CACGAAACTTGCATCTATCCCATTGTGGGGACCATGTGTGTTTGTCTGTG CTTGCGTGAATTTTTTTTTCAAGATTTTTGCTCACGGAGCTCCATGTCGA GCATTTTTGTAGATGGACGACAACCTAACTTTTTCTTCGAGGGACTCGCC TGAGAATCATCCACAAGAGCAACGACAAGAGCAACGACAGCAACCGCCGC ACGAATCGAATGTGGTTTTTCTGCGTGGCGTCGGTTCCATGCCAAACGTG CTCCTGTCGAATTAAAAAGCTGTGCGCGGGTTGCACCCGCCGTGCGAAAG ACGAGGCGATGCGAACTCAGTTTTCGTTTTTTATCGCGGCCGTGGTGGGG TGTTCTTTAAGCTTGCTTCGCATGAGGTTGGTTGGTTGTTAGCACAGGAA CCAAACCAATCGATTGTGTGCATGCCTGACATGGTGCGCACGCTCTTTTT TTTTTTACGTCGCTGTTGCAGGTTTCCCACCGTCGACCCTCCGCAAGATC GCCCAAAAGTTCAACGATTCACAGGTGTGGTCTACGCTACCATGCCGAAA CACTCCTGTGTAACATTTTTGTAACATTGGTCGTATTTTGATCGCAGGTG CTTGCCGCGTCTGTTCCCTACTCCCACGGTGCACTAGCCTAGTGCTCCCT CTTCTCCACGCCCCCTAGAAAGAGACAGCCAACCATGGGCGATCCTGCAA AGGAGTCGCATCTCAGCGCTTTGGCCCCTTTCGTGCCACGTTCCTATCCC TTTCTGACCTCTTTGCTTTACTTTGCTTTGCTTTGCTTTGCTTTGCTTTG CTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTG TTCTGCTCTGCTTTTCTGCGGTTCGGTTCGGCTTGGTATGCTCTGGCTTC GCTCTCGTGTATTGTCCTTTTTTTCTAGGCGCGGCATCTGGTGAGCTACC AGGACCCCAGGAAGGTCACGGAGGTGTACAATTTTGACGTCAACGTCGTC TGCCAGCTGTCGCTCAAGCTAACAGGTACTTCTGTAATTTATGGTATACA TTTGATGTACTTTTGGATCAACATCTTTTTTGGCTTAAGCATCTTCAGCA ACGATAGTGATGACCGCTGGTCGCGCAACAGTTGATGGTGGCTGTCGAAT GGATGTTTTGAGCCAACGACGCTTCAAAACGCCTCTGGAATCGATGACGA CGACGACGACGACCGGTCGGTAGGGTCTGTTGATTTTGGTTACTGCCCTG CCGTTCGCAGCGGCCTGTTTTGACCCGTTGGAAGACCGGGCGGTGTTGGC GGTGGCGGTAATGGCGACGGCGATTGGGTCGGTTTCTCGCGTCCAAGTGG AGATCTGTCTCCGGACCTGCGTGCACTGCACCAGCCAAAGCTGCGTAATT CCTCCCCGGCTCGCTCTCCCACCCTCCCCCCCTCTCTCCCTTCCTCCCGC TATCCTATCTCTCACCTGGGATGCACCCTGTTTATTGTTTTGCTCGCTCT TGGTATTTTTTTCGTTTCGTTTTTTGTGCTGTTGTTCCGTTCGTTTCCAG GTTCCGGGGAAGGTAAGACGATGTACCTCTACCGCCGAAGAAATGTGGAG GCAGGTCTCAAGGTGGAGCGCATCATTGAGGTGGGTCCCTTCGTTCGACA AGACCGGTTCGATTATTCGCTGCATGGATGTATTTTGCTATCTATCGGTT GGACTCCGGTATTCGCGACGTGTTCGGGTCCTATCGATGTTATGGCGGAG GATAGCGCGTCAGGTACTCGCCGGTAGCCTGACTCTTTGTGGGACAAGTC ATGGGGAAGATGACGTGTGGGTGACGGGACGAAACGCTATCCGAACCGTA TATCGTACAGCTGGGTTCTGTCCGAGTTTTACCTCAGGGTAGCTGCGATC CGGTCACTGTTGGGTGTTGGCAGTTCTTCTGGCCCTTCGGGGTTTTCGTT GGAATGATGATGATGATGCTGATGATGATGATGATGGTTGTCTGCAGACA TTCCTCCCTCGCTCGGCAAACTCTCTTGGGTTTCTGATAATGTGGGATGT TGTTGATGATGATGATGATGATGATGATGATGGTGATGGTAATGTGGGAT GATGATGATGATGATGATGATGATGTACAGGTGGACCCGTTCTTCGCCGA GGGGGTGAGGCTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig16:363900..368662-

>mRNA_P-littoralis_Contig16.93.1 ID=mRNA_P-littoralis_Contig16.93.1|Name=mRNA_P-littoralis_Contig16.93.1|organism=Pylaiella littoralis U1_48|type=CDS|length=813bp|location=Sequence derived from alignment at P-littoralis_Contig16:363900..368662- (Pylaiella littoralis U1_48)
CGGGAGGGCAGCTTAACGCCTCGAAAGAAGAAGGCGGACGACGGACCAGT
GCGCACTCTGTCGATGACGCCTACGAAGAAAAAGAGGGGGGCGTTCGGCC
GGACTGGGGTTCCCATGAAGGACAGGATTGCGGTACCAGCGAAGGTCAAC
AAGGTGTACTCCTTGTTGCAGAAGGTCACCGGGAACATCGGCGGCAACGG
GAGCGACGGAGCAATCTACGGAGAGCTCACGGTTGGCGGTATGCAGAAGG
TCATCAACGTTCTCAAGGAGGAGGCGGGTTTCGACGAGAACTCGAGCTTT
ATCGACGTGGGGTCAGGTCTCGGGAAGCCCAACTTTCACGTGGCGCAGGA
CCCGGGGGTGGAGATATCCTACGGGCTTGAGCTGGAGAAGGTTCGGTGGC
AGCTGAGCATCGCCAACCACCGAAAGGTACTTTCATCCAACGATGCGAAC
GGGATTGACGTGTCCAAGCACAATCTCTTCTTCGCCATGGGTGACATCCT
CGGCTGCGAGACCTTCGACCCCTTCACCCACGTCTACATGTTCGACATCG
GTTTCCCACCGTCGACCCTCCGCAAGATCGCCCAAAAGTTCAACGATTCA
CAGGCGCGGCATCTGGTGAGCTACCAGGACCCCAGGAAGGTCACGGAGGT
GTACAATTTTGACGTCAACGTCGTCTGCCAGCTGTCGCTCAAGCTAACAG
GTTCCGGGGAAGGTAAGACGATGTACCTCTACCGCCGAAGAAATGTGGAG
GCAGGTCTCAAGGTGGAGCGCATCATTGAGGTGGACCCGTTCTTCGCCGA
GGGGGTGAGGCTC
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