mRNA_P-littoralis_Contig16.89.17 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI) HSP 1 Score: 1023 bits (2644), Expect = 0.000e+0 Identity = 560/1024 (54.69%), Postives = 722/1024 (70.51%), Query Frame = 1
Query: 22 TVLLWL---ASSVLLLGRA-IEAINVEYSEVHPLEEAHAEGEFTRDNIFAIEEDYGGVDPIDNDCYGDKCVGLLTRDGSVDLGSRYGCTEPQQLDGGGDVCGVLYWLNYGYSDTVIISQVKIALHPDSVTKVRVLVDNQVAVEEWDAVTGSTDLQEIPGLEGLEAGTIALEGVMGIGEYFAILETEIYIIVDEVEPIGVSASTRATVSATATANEASAMNTLDGDATDASSWSC-SSE-SCEITYDLETMESLQQLRVAFSEDTDAGGELNLMAADESGVFSSVKSGIEAGGRPLGSDGLQTFGGIRSLARYVKIVAVPSS-GGKIGINEASNAMPSVELRVREDAPTRPVAEKKWLKETGMLPMGSDPSSSLEPNYDSRAASDGGCDPPAALDGCSIYYIKDGDM--DTRWSCGPLSTGESSFRPSECEVDFSLNYYRYVRQIKLAFHIGDELYKEFSVMAFTALLGWVTVVPSAISSGETTGFQTFDVNVHTNAIRLVPKYTRIGEVFSVTEMVILERRKQDFVEGTVPVFHVYENFVSGGADFENNDDFSSIAEEASPEAPTHFKFDIPARDDEVRVVLPDARVTAVRMRFPAGRKFVFTVEYSLGQFFDDGQNTDEFTSAGGEKMWETFTLSDTALYD--LSIAAVTGPSFENFPDYPTLRVVDFQVVGELTNYNDDGYDIYLNMVTTTTSIWELIPDIIGDGVSDQEEIMMAICEAKGAAFDGTDCVGELNDSTFYLNLRTGDHYVDGPVFLKSGVTISGR-ISGDSPNYTTFILYDGDNNGKTSEDAMLVIDGVVGGVVEDIFFQHKTPMTGEIVPGTIGNLCMEVRNSEELRFSELRLSDARTGGATFADSKNISTFIFWSGQYETGNYMELTRVDDFYVRSFPDMAGLLIDTSNNIWFQG--EDEFEFPTAVISPPTGGDQTASVVITGDSSGIILQNCVVAAGADPR-ILVESTEPVTLDNVIEYEEAVSGDCMVEVPTGTGVDLIIQTRTDPDDDSTGEVNPQLVKSGNCWVLE 3048
++L WL A LLLG EAI+VE SEV P+EEA+A GE + +IE+ YGG DPID DC +CVGLLTRDGS++L SRYGCT P CGV + L+ + D I+ V IALHPDS++K+RVLVD +EEWDAV GS++LQEIPGLEG+E G +++EGV G G+Y AILE IYI+VDEVEP+GVSASTR ++SATAT N ASA+ TLDGDATD SSW+C SSE +CEITYDL+ +ESLQQLR+AFS +TDAG +LN++AA ESGVFS V+SG+EAGGRPLGSDGLQTFGG+ +LARYV+I AVPS GG I INE VELRV DAP RPV+EK WL+ TGMLP+ +D SS PN+D+R S GGCD PA +GC +YYIKDGDM D+RW+CGPL+ G +C + SLNY+RYVRQI+ AFH+GDE Y EFS+ TVV SAISSG++T +QTFD+ VHTN IRLVP + R+ + + EMVILE ++ F+ GT+PVF F G +DD S ++E + PT F+F +P +D + +P + VTAV++RFP+ R+FVF V Y + D + +EFTSAGG ETFTLS A + + I AV+GP+FE+ PDYPTLRV+DFQ+VGE+ D G+ +VTTT ++W ++PDIIGDGVSDQEEIM ICE KG AFDGTDCVGEL+DS+ +++++ G +++DGPVFLKSGVT+SG S + P+ T +L+ N EDA++VIDGV GG V+ ++ +H+TPMTG+I PGT+GNLC+EVR S++L+ +E+ ARTG A F DSKNIS + G+YETGN+ME+ VDDF+ P++AGL I+ SNN+ QG + +E PT V PPTGGDQ ASVVITG SSGI+ Q+C + AG D +L+ESTEP+TLDN++ YE A SGDC+++VP +G DLI+Q + L K G+CWV +
Sbjct: 2 SLLRWLLAPAGYSLLLGIVGCEAISVELSEVLPIEEAYATGEHAGLSASSIEDFYGGEDPIDGDCAVGRCVGLLTRDGSLELDSRYGCTPPYA-----GFCGVDFALSADFVDKSILGGVTIALHPDSMSKLRVLVDGATILEEWDAVPGSSELQEIPGLEGVEGGRLSIEGVEGAGDYLAILEVGIYIVVDEVEPLGVSASTRTSISATATTNNASAILTLDGDATDGSSWACLSSEGACEITYDLQAVESLQQLRIAFSTNTDAGAKLNVLAAGESGVFSYVRSGLEAGGRPLGSDGLQTFGGVLALARYVRIEAVPSGEGGAIVINE-------VELRVG-DAPVRPVSEKAWLQPTGMLPLAADTGSSGHPNFDNREPSAGGCDSPAHFEGCHVYYIKDGDMSDDSRWTCGPLAAGNLVSNNEDCHLMLSLNYFRYVRQIQFAFHMGDEQYNEFSIE---------TVVSSAISSGDSTDYQTFDIEVHTNEIRLVPVFQRVDQWIGIKEMVILETKEMGFINGTLPVFDYSYWFPRGDG---GDDDSSGDSDE---DVPTRFEFHMPRPEDYFQFRVPPSTVTAVKLRFPSDRQFVFRVSYD--EIETDEEIVEEFTSAGGPDTMETFTLSAPADVERFVYITAVSGPTFESQPDYPTLRVIDFQIVGEIKK--DPGH---FEVVTTTMTVWRVVPDIIGDGVSDQEEIMTTICETKGGAFDGTDCVGELDDSSVHISMKNGHYFLDGPVFLKSGVTLSGGDYSYNEPSRTYLVLH----NHTRLEDAVIVIDGVTGGEVDSVYIEHQTPMTGDITPGTLGNLCLEVRGSQDLKLAEIDCHQARTGAARFVDSKNISVSVIRDGEYETGNFMEVDGVDDFHFEGIPEVAGLRIEDSNNVVLQGGASNVYEVPTPVFLPPTGGDQAASVVITGASSGIVFQDCSIYAGGDTAPVLMESTEPLTLDNILGYEAAESGDCIIDVPPESGDDLIVQLNS----------YAILSKDGDCWVWD 976
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE) HSP 1 Score: 982 bits (2539), Expect = 0.000e+0 Identity = 540/1009 (53.52%), Postives = 696/1009 (68.98%), Query Frame = 1
Query: 76 AINVEYSEVHPLEEAHAEGEFTRDNIFAIEEDYGGVDPIDNDC-YGDKCVGLLTRDGSVDLGSRYGCTEPQQLDGGGDVCGVLYWLNYG--YSDTVIISQVKIALHPDSVTKVRVLVDNQVAVEEWDA---VTGSTDLQEIPGLEGLEAGTIALEGVMGIGEYFAILETEIYIIVDEVEPIGVSASTRATVSATATANEASAMNTLDGDATDASSWSCSS--ESCEITYDLETMESLQQLRVAFSEDTDA-GGELNLMAADESGVFSSVKSGIEA--GGRPLGSDGLQTFGGIRSLARYVKI-VAVPSSGGKIGINEASNAMPSVELRVREDAPTRPVAEKKWLKETGMLPMGSDPSSSLEPNYDSRAASDGGCDPPAALDGCSIYYIKDGDMDTRWSCGPLSTGESSFRPSECEVDFSLNYYRYVRQIKLAFHIGDELYKEFSVMAFTALLGWVTVVPSAISSGETTGFQTFDVNVHTNAIRLVPKYTRIGEVFSVTEMVILERRKQDFVEGTVPVFHVYENFVSGGADFENNDDFSSIAEEASPEAPTHFKFDIPARDDEVRVVLPDARVTAVRMRFPAGRKFVFTVEYSLGQFFDDGQNTDEFTSAGGEKMWETFTLSDTALYD--LSIAAVTGPSFENFPDYPTLRVVDFQVVGELTNYNDDGYDIYLNMVTTTTSIWELIPDIIGDGVSDQEEIMMAICEAKGAAFDGTDCVGELNDSTFYLNLRTGDHYVDGPVFLKSGVTISGRISGDSPNYTTFILYDGDNNGKTSEDAMLVIDGVVGGVVEDIFFQHKTPMTGEIVPGTIGNLCMEVRNSEELRFSELRLSDARTGGATFADSKNISTFIFWSGQ-YETGNYMELTRVDDFYVRSFPDMAGLLIDTSNNIWFQGEDEFEFPTAVISPPT-GGDQTASVVITGDSSGIILQNCVVAAGADPRILVESTEPVTLDNVIEYEEAVSGDCMVEVPTGTGVDLIIQTRTDP--DDDSTGEVNPQLVKSGNCWVLE 3048
AI VE SEV A T D + + G DPI +DC +C+G LTRDGS++L SRY CT + CGV Y L G + D IS V+IALHPDSV ++V + +E W+A +T + ++QEIPG+EGL + + G M IGE ILE EIY+ VDE+E GVSASTRA V+ATA+A+ ASAMNTLDGD + +SSW+CS+ E CE+T+DL+ +ESL+QLR+AFSE+TDA GGE ++M A ESGVFS+V++GIEA RPLG+DGLQT GG+R++ARYVK+ V VP+SGG I I+E VE RV ED P RPVAEK WLK TG LP +P S +P++D R DGGCDPP +GC ++YIKD +MD+RW+CGPL G S +C+++FSLNY+RY+RQI++AF+ GD + EFS+ A+TA WVTVVPSAISS + + +QTFDV VHTN IRL+PK+ +I + + E+V LE+RK+DF+EGT+PVF S NDD A + PT F+FD+ + + + +P + VTA+RMRFPA R FVF VEY DG +EFTSAGG K WETFTLS A D L + AVTGP+F++ PDYP LRVVD QVVGEL + GY +++VTTT W ++PD+IG+GVS+Q+ +M AICEAKG+ FDG DCVGEL+DS + L+ GD+Y+DGP+FLKSGV I G + P + +LYDGD+N T EDAM+V+DG G + + F K TG+IVPGT+GN + VRNS+++RFSE+ L R GGATF DS+N+S FIF++G ETGNYMELTRVDD + R+ P+M+G+LIDT N+I F+G DEF P+A SPP GGDQTA+VV+TGDSSGI+ QN +VAAGA+PRILVESTEP+TLDNVI Y +A GDC+VEVP GT D ++Q RT+P D S +N L KSG CWVLE
Sbjct: 25 AITVELSEVL------APSAITVDAEWQGSSSFSGTDPISHDCPLSGRCIGQLTRDGSLELDSRYDCTRLLESAS----CGVRYGLIDGGQWGDLSTISSVRIALHPDSVQSLQVGIGRN-ELEAWEADPDLTAAGEMQEIPGVEGLTGSDLYIYGDMEIGESLRILEVEIYVAVDEIEATGVSASTRAFVTATASADSASAMNTLDGDVSASSSWTCSAGDEVCEVTFDLQAVESLEQLRIAFSEETDAVGGEFSVMTAGESGVFSAVRTGIEADPAARPLGTDGLQTVGGVRAMARYVKLGVTVPTSGGSIAISE-------VEFRVGEDVPARPVAEKAWLKTTGPLPRAVNPGGSQDPSFDIRLPEDGGCDPPIHFEGCHVFYIKDENMDSRWTCGPLVAG-SDRNSWDCDLEFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAISSEDGSDYQTFDVAVHTNMIRLLPKFGQITDFIGIKELVFLEKRKKDFIEGTIPVFSTRIRSTS-------NDDEEEDG--ADVDIPTRFEFDLQIEGNYIDMNVPPSTVTALRMRFPADRSFVFMVEY-------DGI-VEEFTSAGGPKTWETFTLSTPAEVDFGLEVVAVTGPTFDHIPDYPALRVVDLQVVGELRK--EPGY---IDVVTTTIETWGVVPDVIGEGVSEQKTVMKAICEAKGSTFDGIDCVGELDDSEVTIKLQFGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDPTGDIVPGTVGNTNLAVRNSQDIRFSEMGLFSGRNGGATFTDSRNMSAFIFYNGDGLETGNYMELTRVDDVHFRALPNMSGVLIDTCNDIVFEGVDEFAIPSAYFSPPVAGGDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE 992
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: D8LG22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG22_ECTSI) HSP 1 Score: 520 bits (1339), Expect = 1.010e-166 Identity = 266/477 (55.77%), Postives = 337/477 (70.65%), Query Frame = 1
Query: 1636 NNDDFSSIAEEASPEAPTHFKFDIPARDDEVRVVLPDARVTAVRMRFPAGRKFVFTVEYSLGQFFDDGQNTDEFTSAGGEKMWETFTLSDTAL--YDLSIAAVTGPSFENFPDYPTLRVVDFQVVGELTNYNDDGYDIYLNMVTTTTSIWELIPDIIGDGVSDQEEIMMAICEAKGAAFDGTDCVGELNDSTFYLNLRTGDHYVDGPVFLKSGVTISGRISGDSPNYTTFILYDGDNNGKTSEDAMLVIDGVVGGVVEDIFFQHKTPMTGEIVPGTIGNLCMEVRNSEELRFSELRLSDARTGGATFADSKNISTFIFWSG-QYETGNYMELTRVDDFYVRSFPDMAGLLIDTSNNIWFQGEDEFEFPTAVISPPTGG-DQTASVVITGDSSGIILQNCVVAAGADPRILVESTEPVTLDNVIEYEEAVSGDCMVEVPTGTGVDLIIQTRTDP--DDDSTGEVNPQLVKSGNCWVLE 3048
N+DD E A + PT F+FD+P D + + +P + VTA+RMRFPA R FVF VEY G +EFTSAGG K WETFTL+ A Y L I AVTGP+F++ PDYP LRVVDFQVVGEL + GY +++VTTT W ++PD+IG+GVS+Q+ +M AICEAKG+ FDG DCVGELNDS + L GD+Y+DGP+FLKSGV I G + P + +LY+GD+N T EDAM+V+DG G + + F K TG+IVPGT+GN + VRNS++++FSE+ L R GGATF DS+N+S FIF++G + ETGNYMELTRVDD + R+ P+M+G+L DT N+I F+G D+F PTA SPP G DQTA+VV+TGDSSGI+ QN VVAAGA+PRILVESTEP+TLDNVI Y +A GDC+VEVP GT D ++Q RT+P D S +N L KSG CWVLE
Sbjct: 31 NSDDDEE--EGADVDIPTRFEFDLPIEGDYIDMDVPPSTVTALRMRFPADRSFVFMVEY--------GDVVEEFTSAGGPKTWETFTLATPAEVDYGLDIVAVTGPTFDHIPDYPALRVVDFQVVGELRK--EPGY---IDVVTTTIETWGVVPDVIGEGVSEQKNVMKAICEAKGSTFDGVDCVGELNDSEVTIKLHFGDYYIDGPIFLKSGVFIDGEWQDEYPTFCWLVLYEGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEEPTGDIVPGTVGNTNLAVRNSQDIQFSEMGLFSGRNGGATFTDSRNMSAFIFYNGDELETGNYMELTRVDDVHFRALPNMSGVLFDTCNDIVFEGVDDFAIPTAYFSPPVAGSDQTANVVVTGDSSGIVFQNFVVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPEGTDEDFVVQVRTNPFSDTSSIDTINQLLAKSGTCWVLE 492
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: D8LG23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG23_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 1.380e-144 Identity = 277/515 (53.79%), Postives = 354/515 (68.74%), Query Frame = 1
Query: 37 LASSVLLLGRA-IEAINVEYSEVHPLEEAHAEGEFTRDNIFAIEEDYGGVDPIDNDC-YGDKCVGLLTRDGSVDLGSRYGCTEPQQLDGGGDVCGVLYWL--NYGYSDTVIISQVKIALHPDSVTKVRVLVDNQVAVEEWDA---VTGSTDLQEIPGLEGLEAGTIALEGVMGIGEYFAILETEIYIIVDEVEPIGVSASTRATVSATATANEASAMNTLDGDATDASSWSCSS--ESCEITYDLETMESLQQLRVAFSEDTDA-GGELNLMAADESGVFSSVKSGIEA--GGRPLGSDGLQTFGGIRSLARYVKI-VAVPSSGGKIGINEASNAMPSVELRVREDAPTRPVAEKKWLKETGMLPMGSDPSSSLEPNYDSRAASDGGCDPPAALDGCSIYYIKDGDMDTRWSCGPLSTGESSFRPS-ECEVDFSLNYYRYVRQIKLAFHIGDELYKEFSVMAFTALLGWVTVVPSAISSGETTGFQTFDVNVHTNAIRLVPKYTRIGEVFSVTEM 1539
+ S +L LGR AI VE SEV A T D + + G DPI +DC +C+G LTRDGS++L SRY CT + CGV Y L + + D IS VKIALHPDSV +V + Q +E W+A +T + ++QEIPG+EGL + + G M IGE ILE EIYI VDEVE GVSASTRA+V+ATA+A+ SAMNTLDGDA+ ASSW+CSS E CEIT+DL+ +ESL+QLR+AFSE+TDA GGE ++M A ESGVFS+V++G+EA GRP+G+DGLQTFGG+R++ARYVK+ V VP+SGG I I+E VELRV ED P RPVAEK WLK TG LP SL+P+YD R DGGCDPP +GC ++YIKD +MD+RW+CGPL G S R S +CE+DFSLNY+RY+RQI++AF+ GD + EFS+ A+TA WVTVVPSAIS+ + + +QTFDV VHTN IRL+PK+ +I + + E+
Sbjct: 11 IGSLLLSLGRHHTGAITVELSEVL------APSAITVDAEWQGSSSFSGTDPISHDCPLSGRCIGELTRDGSLELDSRYDCTRLLESAS----CGVRYGLIDSAQWDDRTTISSVKIALHPDSVQSFQVGI-GQDELEAWEADPDLTAAGEMQEIPGVEGLTGSDLYIYGDMEIGESLRILEVEIYITVDEVEATGVSASTRASVTATASADSVSAMNTLDGDASAASSWTCSSGDEVCEITFDLQAVESLEQLRIAFSEETDAVGGEFSVMVAGESGVFSAVRTGLEADPAGRPVGTDGLQTFGGVRAMARYVKLGVTVPTSGGTIAISE-------VELRVGEDVPARPVAEKAWLKTTGPLPRAVSSGGSLDPSYDIRLPEDGGCDPPIHFEGCHVFYIKDENMDSRWTCGPLVAG--SDRSSWDCELDFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAISAEDGSDYQTFDVAVHTNMIRLLPKFGQITDFIGIKEV 505
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 210 bits (534), Expect = 9.150e-52 Identity = 262/1051 (24.93%), Postives = 446/1051 (42.44%), Query Frame = 1
Query: 148 NIFAIEEDYGGVDPIDNDCYGDKCVGLLTRDG-SVDLGSRYGCTEPQQLDGGGDVCGVLYWLNYGYSDTVIISQVKIALHP-DSVTKVRVLVDNQVAVEEWDAVTGSTDLQEIPGLEGLEAGT----IALEGVMGIGEYFAILETEIYIIVDEV---------EPIGVSASTRATVSATATANEASAM-------------NTLDGDATDASSWSCSSE---SCEITYDLETMESLQQLRVAFSEDTDAGGELNLMAADESGVFSSVKSGIEAGGRPLGSDGLQTFGGIRSLARYVKIVAVPSSGGKIGINEASNAMPSVELRVREDA----PTRP---------------VAEKKWLKETGMLPMGSDPSSSLEPNYDSRAASDGGCDPPAALDGCSIYYIKDGDMDTRWSCG--PLSTGESSFRPSECEVDFSLNYYRYVRQIKLAFHIGDELYKEFSVMAFTALLGWVTVVPSAISSGETTGFQTFDVNVHTNAIRLVPKYTRIGEVFSVTEMVILERRKQDFVEGTVPVFHVYENFVSGGADFENNDDFSSIAEEASPEAPTHFKFDIPARDDEVRVVLPD-ARVTAVRMRFPAGRKFVFTVEYSLGQFFDDGQNTDEFTS-----AGGEKMWETFTLSDTALYDLSIAAVTGPSFENFPDYPTLRVVDFQVVGELTNYNDDGYDIYLNMVTTTTSIWELIPDIIGDGVSDQEEIMMAICEAKGAAFDGTDCVGELNDSTFYLNLRTGDHYVDGPVFLKSGVTISGRISGDSPNYTTFILYDGDNNGKTSEDAMLVIDGVVGGVVEDIF----FQHKTPMTGEIVPGTIGNLCMEVRNSEELRFSELRLSDARTGGATFADSKNIST--------FIFWSGQYETGNYMELTRVDDFYVRSFPD----MAGLLIDTSNNIWFQ--------GED---EFEFPTAVISPPTGGDQTASVVITGDSSGII-LQNCVVAAGADPRILVESTEPVTLDNVIEYEEAVSGDCMVEVPTGTGVDLIIQTRTDPDDDSTGEVNPQLVKSGNCWV 3042
N+ A+ E Y ++ C CV LTRDG + L SR+ C +P D G + C + Y L Y +S + IA++ D T+ + + + W + +G+T G E +E T I++ GV+ E+ +I+E +I I E GV AST +V+A A+ + NT DGD + AS WSC+ C I+YDL T L +LR+A + T+ + + D++ V + SG +DG + + + ++I V + I EA E+ V ED PT P + L+ G++P+ S +SLE Y++KDGDM T W+C P T ++S+ +C + FS+ +R ++Q+K+A G E + + A + SSG T GF+T+D + TN + + +T G+ S++E+ +E + +G V V DFE ++ A+ +A A D+++ VL A + AV ++FP G T ++ L + D+ + FT + G + +E T+ D + TG + P ++ + + G + D + + VT S + PD + +G DQ+ IM AIC K A+FDG DCVG + +T +++ G+ +VDG +F+KSGV + S D YTT I+ + GKT AM+V+D + + + + + +T V G +G++ + + S + + + + DS+ I+ ++ W+ G + + D +VR + +AG+ + SNN F+ GED E E + G Q VV+ +SS ++ Q+ V + DP I+V + V+ DN + +G C+++ T + V +TG+ +P+L G C+V
Sbjct: 15 NVTAVAELYDPRLSAESGCDPSGCVAELTRDGDATSLESRWAC-KPALGDAGSE-CRITYGLGIQYQ----LSSLNIAMYKGDERTRTLEISIDNLPYTTWTS-SGTTT-----GFETIELDTMGRWISIVGVLADSEWLSIMEVKIMIDDGETGSDDDNTTTNASGVEASTLGSVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTASRWSCAPTLGGECTISYDLGTAYDLDELRLAMFKGTERQVSMKVRV-DDALVTTWTSSGT--------TDGFEAIDLSGTWGQVLEITGVLDDSEWLSIIEA-------EIMVLEDGASPMPTTPXXXXXXXXXXXXXXXTSTTGTLQPVGLIPLASTGGTSLE-----------------------RYHVKDGDMSTSWTCSGNPQETADTSY---DCILQFSMFCHRNIKQVKIALPDGAERAVDMRIAAPYSSNSASFEEIFVTSSGTTDGFETYDFDHFTNYVSIAGVFTSSGQSISISEVEFVE----EIQDGEVSV-----------VDFETPYYGDALWPGATTDAFVWASESDAAIDEKLSFVLKSYAVMEAVELQFPIGE----TYKFELTLYDDEDEIVSTFTGFESVDSEGWQRFELGTIDDPVTEIAIVMKGTGS------EAPGFKLANARFFGTAIDNPSDTFYVGSTYVTEWNS--DRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVHLHAWFSIDDSPYTTDIILEDGAAGKTDTAAMIVMDNISNARLSNTWIIGNYDSETSNDTPTVHG-LGSVGLSITGSTNITCIDASVYSSDGDALVVRDSQMINIDSGPYDDDYLPWTIGQSRGTGIVVDSSDSVWVRRYTTYDNGVAGIHVSGSNNFTFEATIADKCWGEDCVLEGEGNVGSLD----GQQPIEVVV--ESSTLVKFQDMKVQSVNDPVIVVSGSSGVSFDNC-GFSNVETGTCVIQTDTTSEV-------------TTGD-DPELSLDGTCYV 962
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 207 bits (526), Expect = 2.230e-50 Identity = 248/1021 (24.29%), Postives = 432/1021 (42.31%), Query Frame = 1
Query: 190 IDNDCYGDKCVGLLTRDGSVDLGSRYGCTEPQQLDGGGDVCGVLYWLNYGYSDTVIISQVKIALHPDSVTKV--RVLVDNQVAVEEWDAVTGSTDLQEIPGLEGLEAGTIALEGVMGIGEYFAILETEIYIIVDEVEPIG----------VSASTRATVSATATANEAS-------------AMNTLDGDATDASSWSCSSE---SCEITYDLETMESLQQLRVAFSEDTDAGGELNLMAADESGVFSSVKSGIEAGGRPLGSDGLQ----TFGGIRSLARYVKIVAVPSSGGKIGINEASNAMPSVELRVREDAPTRPVAEKKWLKETGMLPMGSDPSSSLEPNYDSRAASDGGCDPPAALDGCSIYYIKDGDMDTRWSCG--PLSTGESSFRPSECEVDFSLNYYRYVRQIKLAFHIGDELYKEFSVMA-FTALLGWVTVVPSAISSGETTGFQTFDVNVHTNAIRLVPKYTRIGEVFSVTEMVILERRKQDFVEGTVPVFHVYENFVSGGADFENNDDFSSIAEEASPEAPTHFKFDIPARDDEVR------VVLPDARVTAVRMRFPAGRKFVFTVEYSLGQFFDDGQN-TDEFTS-----AGGEKMWETFTLSDTALYDLSIAAVTGPSFENFPDYPTLRVVDFQVVGELTNYNDDGYDIYLNMVTTTTSIWELIPDIIGDGVSDQEEIMMAICEAKGAAFDGTDCVGELNDSTFYLNLRTGDHYVDGPVFLKSGVTISGRISGDSPNYTTFILYDGDNNGKTSEDAMLVIDGVVGGVVEDIF-FQHKTPMTGEIVPGT--IGNLCMEVRNSEEL--RFSELRLSDARTGGATFADSKNISTFIF------WSGQYETGNYMELTRVDDFYVRSFPD----MAGLLIDTSNNIWFQGE--DEFEFPTAVISPPTG-----GDQTASVVITGDSSGII-LQNCVVAAGADPRILVESTEPVTLDNVIEYEEAVSGDCMVEVPTGTGVDLIIQTRTDPDDDSTGEVNPQLVKSGNCWV 3042
+D C CV TRDG + SR+ C G C + Y L Y + ++++A++ + +V V VD+ + V W + +G+TD E L G T+ + GV+ E+ +I+E EI ++ D + G V AST +V+ A+ + S A NT DGD + AS WSC+ + C I+YDL T L ++R+A + T+ + + D++ V + SG G + G G+ + ++ I+ + G + + L+ G++P+ S +SLE Y+IKDGDM T W+C P + + +C + F++ +R+++Q+K+A G E + + A + A G V V SSG T GF+TF+ + T+ + + +T G+ S++E+ +E + +G V V V A ++N D + A T F+ + DE V+ A + AV ++FP G + F E +L +DDG FT + G + +E T+ D I TG P ++ + + +G T ++ Y+ + + PD + +G DQ+ IM AIC K A+FDG DCVG + +T +++ G+ +VDG +F+KSGV + S D YTT I+ + GKT A++V+DG+ + +++ + H T P +G++ + + S + R++ + SD ++ NI + W+ G + + D ++R + +AG+ + SNN F+ DE V+ G Q V++ +SS ++ Q+ V + DP + V + V+ DN + SG C+++ + V +TG+ +P+L G C+V
Sbjct: 219 VDGGCDPSGCVADNTRDGDLSTASRWSCAPTL-----GGECTISYDLGTVYE----LDELRLAMYKGTERQVTMEVRVDDTL-VTTWTS-SGTTDDLEAIDLSGTSGQTVEITGVLDDSEWLSIVEVEI-MVEDGDQGSGDDDTTTNTSAVEASTLGSVTVGASLYDPSLAVDGGCDPSGCVADNTRDGDLSAASRWSCAPKLGGECSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRV-DDALVITWTSSGTTDGFEAIDMSGTSGQVLEITGVLDDSEWLSIIEAEIMLLEDGASPTPTTXXXXXXXXXXXXXXXXXSTTGTLQPVGLIPLASTGGTSLEK-----------------------YHIKDGDMSTSWTCSGDPQEADDPYY---DCILQFNMFSHRHIKQVKIALPDGAERAVDMRIAAPYDASFGEVFVT----SSGTTDGFETFEFDYFTDVVSIAGVFTSGGQSISISEVEFVE----EIQDGEVSV-------VDFDAPYDNGDGLWTGA--------TTDAFEWSSESDEAMDRTLSFVLNSYALMEAVELQFPVGETYKF--ELTL---YDDGDEIVSTFTGLESVDSEGWQRFELGTIDDPVTEVTIIMKGTGSGA------PGFKLANARFLG--TAIDNPSNTFYVGSTYVESWRSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVYLDASFSIDDSPYTTDIILEDGAAGKTDTAAIIVMDGISDARLSEVWIYGHYDSETSNDTPAVDGLGSVGLSITGSTNITCRYASVYSSDGDALVVRDSEMVNIDAGPYDEEYRPWTIGQSRGTGIVVDSSDSVWIRRYTTSDNGIAGIHVSGSNNFTFEATIADECWTDDCVLEGEGNVGSLDGQQPIEVIV--ESSTLVKFQDMKVQSVNDPVMTVSGSSGVSFDNC-GFSNVESGTCVIQTDATSEV-------------TTGD-DPELSLDGTCYV 1147
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 207 bits (526), Expect = 2.260e-50 Identity = 268/1044 (25.67%), Postives = 428/1044 (41.00%), Query Frame = 1
Query: 196 NDCYGDKCVGLLTRDGSVDLGSRYGCTEPQQLDGGGDVCGVLYWLNYGYSDTVIISQVKIALHPDSVTKVR---VLVDNQVAVEEWDAVTGSTDLQEIPGLEGLEAGTIALEGVMGIGEYFAILETEIYIIVDEV-EPIGVSASTRATVSATATA-------------------NEASAMNTL-------------------------DGDATDASSWSCS------SESCEITYDLETMESLQQLRVAFSEDTDAGGELNLMAADESGVFSSVKSGIEAGGRPLGSDGLQTFGGIRSLARYVKIVAVPSSGGKIGINEA-------SNAMPSVELRVREDAPTRPVAEKKWLKETGMLPMGSDPSSSLEPNYDSRAASDGGCDPPAALDGC-----SIYYIKDGDMDTRWSCGPLSTGESSFRPSECEVDFSLNYYRYVRQIKLAFHIGDELYKEFSVMA-FTALLGWVTVVPSAISSGETTGFQTFDVNVHTNAIRLVPKYTRIGEVFSVTEMVILERRKQDFVEGTVPVFHVYENFVSGGADFENNDDFSSIAEEASPEAPTHFKFDIPARDDEV--RVVLPD----ARVTAVRMRFPAGRKFVFTVEYSLGQFFDDGQNTDEFTSAGGEKMWETFTLSDTALYDLSIAAVTGPSFENFPDYPTLRVVDFQVVGELTNYNDDGYDIYLNMVTTTTSIWELIPDIIGDGVSDQEEIMMAICEAKGAAFDGTDCVGELNDSTFYLNLRTGDHYVDGPVFLKSGVTISGRISGDSPNYTTFILYDGDNNGKTSEDAMLVIDGVVGGVVEDIFFQ-HKTPMTGEIVPGT--IGNLCMEVRNSEE--LRFSELRLSDARTGGATFADSKNIST--------FIFWSGQYETGNYMELTRVDDFYVRSFP----DMAGLLIDTSNNIWFQ---GEDEFEFPTAVISPPTGGDQTASVVITGDSSGIILQNCV-VAAGADPRILVESTEPVTLDNV-IEYEEAVSGDCMVEVPTGTGVDLIIQTRTDPDDDSTGEVNPQLVKSGNCWV 3042
N C C LTRDG V GSR+ C G C + Y L Y +S++++AL+ + T+VR V VD +A W + +G+TD E L G + + GV+ E+ +I ET+I ++ D V P S +T A V A A +E A+ T DGD +S WSC+ +SC I+YDL + +L Q+R+A + G E + A E V + + + G +G++ + F S + V++ V + I E + PS AP PV E L G+LP+ A GC ++ KDGD T W+C +EC + F L +R+++Q+K+A G E + + + L SSG T F+T+D +V TN I + +T + S++E+ +E + G + + ++++ +A + PT FD D+ R V + A V AV ++FP G + F +E + Q + T + W++F LS D + + P ++D +V+G + D + + T + + PD + +G DQ+ IM AIC K A+FDG DCVG + +T + L G YVDG +F+KSGV + G S DSP +T IL +G GKT DAM+V+DG+ + ++I+ + H P T P +G+ + V S LR +E+R D DS IS + WS G + + D YVR +AG+ I +NN F GE+ V + G Q V+I +SS ++ N + V + DP ++V + V+ +N+ + EA + C+++ + V + D D+D +L G+C+V
Sbjct: 209 NGCDPAGCTAELTRDGDVSDGSRWSCAPSL-----GGTCSISYDLGAVYD----LSELRLALYKGT-TRVRTVDVTVDGSLATT-WTS-SGTTDGFENVDLSGYSGQDVTVTGVLDDSEWVSITETDIMVLSDSVVSPPSPSTTTPAPVFAPAATXXXXXKVPSPEQLFAAKEIDEIGAVTTTATLFDPSLLADNGCDPSGCTAGLTRDGDYATSSRWSCAPKLGGDGDSCTISYDLGQVYNLAQIRLAMYK----GDERQVTA--EVRVDGVLVTTWTSSGTTVGAESI-LFSDTTS-GQVVEVTGVLGDSEWLSIIETLIYVWPDTAPTPSTTGSTPAPAPITPVGE---LTAVGLLPL-------------------------ADCTGCFGEDLPPFHSKDGDFSTSWTC---------VGGTECTLRFDLFSWRHIKQVKIALPDGAERAVDMRIAGRYDDELAAAFAEAYVTSSGTTDEFETYDFDVFTNEILISGVFTSASQTISISEVEFME----ELQAGEIQI-----------------SEWNTPLADARVDGPTTDAFDWTTDSDDAIGRTVEFELAWYAMVDAVEIKFPVGDTYKFDLELNDDQIRGEILKTITGFESADTADWQSFDLSQHLDADQFLTEINIVVQGTGSGAPGFAMLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTDRYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTVVLPQGSWYVDGNIFMKSGVFLDGSFSEDSPYFTGIILEEG-AAGKTDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPGLGSTGLSVVGSTNITLRDAEIRFLDG--DALVVRDSNMISIDAGEYEELYSPWSLASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGN--LDGQQPIDVII--ESSTLVTFNDLRVQSSNDPIMMVSDSSTVSFNNLGLSLVEADA--CVIQADDPSTVTI------DADED-------ELTLDGSCYV 1152
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 183 bits (464), Expect = 6.330e-43 Identity = 258/1050 (24.57%), Postives = 415/1050 (39.52%), Query Frame = 1
Query: 196 NDCYGDKCVGLLTRDGSVDLGSRYGCTEPQQLDGGGDVCGVLYWLNYGYSDTVIISQVKIALHPDSVTKVR---VLVDNQVAVEEWDAVTGSTDLQEIPGLEGLEAGTIALEGVMGIGEYFAILETEIYIIVDEV---------------EPIGVSASTRATVSATATANEASAMNTL-----------------------------DGDATDASSWSCSSES---CEITYDLETMESLQQLRVAFSEDTDAGGELNLM---AADESGVFSSVKSGIEAGGRPLGSDG-LQTFGGIRSLARYVKIVAV-----PSSGGKIGINEASNAMPSVELRVREDAPTRPVAEKKWLKETGMLPMGSDPSSSLEPNYDSRAASDGGCDPPAALDGCSIYYIKDGDMDTRWSC--GPLSTGESSFRPSECEVDFSLNYYRYVRQIKLAFHIGDELYKEFSVMA-FTALLGWVTVVPSAISSGETTGFQTFDVNVHTNAIRLVPKYTRIGEVFSVTEMVILERRKQDFVEGTVPVFHVYENFVSGGADFENND-----DFSSIAEEASPEAPTHFKFDIPARDDEVRVVLPDAR-VTAVRMRFPAGRKFVFTVEYSLGQFFDDGQNTDE-FTSAGGEKMWETFTLSDTALYDLSIAAVTGPSFE---NFPDYPTLRVVDFQVVGELTNYNDDGYDIYLNMVTTTTSIW--ELIPDIIGDGVSDQEEIMMAICEAKGAAFDGTDCVGELNDSTFYLNLRTGDHYVDGPVFLKSGVTISGRISGDSPNYTTFILYDGDNNGKTSEDAMLVIDGVVGGVVEDIFFQ-HKTPMTGEI--VPGTIGNLCMEVRNSEELRFSELRLSDARTGGATFADSKNISTFIFWSGQYETGNYMELTRVDDFYVRSFPDMAGLLIDTSNNIWFQ---------------GEDEFEFPTAVISPP--TGGDQTASV-------VITGDSSGIILQNCVVAAGADPRILVESTEPVTLDNVIEYEEAVSGDCMVEVPTGTGVDLIIQTRTDPDDDSTGEVNPQLVKSGNCWV 3042
N C C LTRDG V SR+ C G C + Y L Y +S++++AL+ + T+VR V VD +A W + +G+TD E L G I + GV+ E+ +I ETEI ++ D V P+ T AT +A E +T DGD TD S W+C+ C I+YDL L ++RVA +N+ A + S +G E+ P + G + G+ + ++ I+ P + A+ P+ AP +PV L + P+G P + + R Y KDGD T W+C P + +CE+ F L YYR+V+Q+K+A G E + + F++ + V SSG T GF+T+D + + IR+ ++ GE S++E+ I+E + VEG P+ ++ G N ++SS + EA D + + L VT +++ FP G + F V F++ T E +T+ G + + VT E P ++D V+G + D + + +T W + PD +G G DQ I AIC K +DG +CV + +T ++L G +YV+G +F++SGV + G D P+ T +L +G G T DA++V+DG+ +E ++ Q + P T I V G +G+ C+ V NS+ + + + DS ++ +G+Y+ Y+ T GL++DTS++IW + G + F F + S G SV VI G SS + Q+ V + DP + + + V+ N Y SG C ++ + V + D D+D +LV G C+V
Sbjct: 207 NGCDPAGCTAELTRDGDVSDESRWSCAPSL-----GGTCSISYDLGAVYD----LSKLRLALY-NGATRVRTVDVSVDGSLATT-WTS-SGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKETEIMVLSDGVVFPPSASSPTPAPVFAPVATPTPTVATPEQLYSAKEIGTQDTTVTTTADLFDPDLAVDNGCDPAGCTGALTRDGDMTDTSRWACAPSLGGVCFISYDLGREFGLDEVRVALYNGDIRVRTINVFVDGALVTTWTSSGTTNGFESIALPDTASGTVVELQGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPAT-------APVQPVTPPSPLPAADLQPVGLTPLAIGNESPLDR------------------YATKDGDFTTSWTCTGDPTEPNDEGITYYQCELFFGLVYYRHVKQVKVALADGAERSVDMRLAGRFSSSIAEEFVT----SSGTTNGFETYDFDYKASYIRIAAVFSSPGESISISEVEIME----EVVEGEAPI-DIFSTPYDNGDGLWNEPTTDGFEWSSNSNEAI--------------DQSLTLSLAGYHTVTELQLMFPEGDTYKFDVT-----LFNNLDGTGEAYTTITGLESXXXXXXXXXXXXXXANQYVTSIGIEMKGTGSGAPGFAMLDALVLGTKIDNPSDTFHVG----STFIEYWGGDGYPDFVGSGSGDQNAINGAICGVKKGTYDGVNCVDVDDTATGTVDLSWGAYYVNGNIFMQSGVLLLGSFGDDDPHTTDIVLEEG-AEGNTDIDAIVVMDGIRDAWIEKVWIQGNYDPETDGISAVSG-LGSACLSVVNSQNITCEGVDIRYCSGDALVVRDSTLVNID---AGRYDE-EYLPWTI-------GLSGGTGLIVDTSDSIWVRRTTFYENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTITDSTTVSFTNG-GYSNVPSGTCTIQTDDPSTVTI------DADED-------ELVLEGTCYV 1160 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.89.17 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.89.17 >prot_P-littoralis_Contig16.89.17 ID=prot_P-littoralis_Contig16.89.17|Name=mRNA_P-littoralis_Contig16.89.17|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1013bp MIPTVLLWLASSVLLLGRAIEAINVEYSEVHPLEEAHAEGEFTRDNIFAIback to top mRNA from alignment at P-littoralis_Contig16:324956..358403+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig16.89.17 ID=mRNA_P-littoralis_Contig16.89.17|Name=mRNA_P-littoralis_Contig16.89.17|organism=Pylaiella littoralis U1_48|type=mRNA|length=33448bp|location=Sequence derived from alignment at P-littoralis_Contig16:324956..358403+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig16:324956..358403+ >mRNA_P-littoralis_Contig16.89.17 ID=mRNA_P-littoralis_Contig16.89.17|Name=mRNA_P-littoralis_Contig16.89.17|organism=Pylaiella littoralis U1_48|type=CDS|length=3039bp|location=Sequence derived from alignment at P-littoralis_Contig16:324956..358403+ (Pylaiella littoralis U1_48)back to top |