mRNA_P-littoralis_Contig1583.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1583.3.1
Unique NamemRNA_P-littoralis_Contig1583.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A2E6LQN5_9GAMM (Rieske domain-containing protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6LQN5_9GAMM)

HSP 1 Score: 477 bits (1227), Expect = 2.410e-165
Identity = 225/361 (62.33%), Postives = 266/361 (73.68%), Query Frame = 1
Query:   67 ELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAMSDEDRQILKAALQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWAD 1149
            E+ R+R P+E + +LPPAAY +P V+D EVD +F + W+CVAR EQV  PGDY+C+D  GQPIV+ R  DG L A + +CLHRA PV EG+GNA RFVCPYHHWTYEL G LRSAPMM  AEGF    CRLP+L LEVW+GFVFVN+DP+AA L+PRL  L+ LI+ + FD   V  T EFDSPWNWKILVENFMEAYHHIG H  TFEPVYPAR S +PDN G PW  LRMP +AG ED  +  L+P L+  ++ +L+A  VYPTLLFAASA    WYQLEP  H+AMRLRIH L P   A AMS++DR      ++ IH ED+  NEGPWRGL   +T QGRLS YEK+IWQLNQLW D
Sbjct:   17 EVARVRAPLERSATLPPAAYVDPRVYDVEVDTVFARDWVCVARAEQVPGPGDYVCVDVPGQPIVVARGRDGVLRAFSRICLHRAMPVAEGAGNAGRFVCPYHHWTYELDGTLRSAPMMAGAEGFEPARCRLPALRLEVWQGFVFVNRDPEAAALAPRLAGLEALIRPYRFDGLAVAATTEFDSPWNWKILVENFMEAYHHIGIHGTTFEPVYPARDSSVPDNGGEPWTFLRMPGRAGTED-AAPALFPDLEGAERRQLVAANVYPTLLFAASAAGAFWYQLEPRGHDAMRLRIHVLLPAAVAGAMSEDDRHGAIELVRGIHLEDVPANEGPWRGLHGSMTGQGRLSPYEKAIWQLNQLWLD 376          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A355T6G0_9HYPH (Rieske domain-containing protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A355T6G0_9HYPH)

HSP 1 Score: 374 bits (960), Expect = 8.730e-125
Identity = 178/370 (48.11%), Postives = 240/370 (64.86%), Query Frame = 1
Query:   52 GINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPE-KAGAEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAMS-DEDRQILKAALQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSL 1155
            G+++ EL R+  P+E A +LP  AYT+PD+++ E++ I RK W+ V R +QV  PGDY+C   + QP+++VR  DG +   + VCLHRA P+ EG GN   F CPYH W+Y   G+L  AP+ME AEGF+   C+LP L  E+WEGFV VN + DA P +P++   Q+   N+ F+  V+ +T+EFDSPWNWK+LVENFMEAYHHI  HK TFEPVYPA+ S IPD DG P+ +L MP  +  A+D     L   L+E Q+ +LLA  ++P  L A   T+  WYQ+ P++ +   L+IH + P  +A   + DE  +   A L  IH EDI  N+  W GL+APLT QGRLS  E+SIWQLNQ W   L
Sbjct:   14 GLSADELARVSAPLEDAWTLPTGAYTDPDLYELEIERIMRKSWLPVGRVDQVPNPGDYICFTLYDQPLMLVRGTDGNVRVMSRVCLHRAAPIAEGEGNRKLFSCPYHAWSYATDGQLVRAPLMEGAEGFDEKSCKLPELRTEIWEGFVLVNFNDDAEPFAPQVATFQKTFSNYKFEDMVIIKTLEFDSPWNWKVLVENFMEAYHHIAIHKTTFEPVYPAKDSKIPDADG-PYSILHMPSIEPHADDADGLPLIEGLEEWQKKDLLATVLFPNFLLAFQGTSATWYQITPASVDRFHLKIHFMVPKSSAELPNIDEIAEGAGALLSVIHHEDIEANDMVWEGLKAPLTSQGRLSPLERSIWQLNQWWLREL 382          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A2Z4UNU3_9HYPH (Anthranilate 1,2-dioxygenase large subunit n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UNU3_9HYPH)

HSP 1 Score: 372 bits (956), Expect = 3.080e-124
Identity = 177/371 (47.71%), Postives = 241/371 (64.96%), Query Frame = 1
Query:   52 GINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAG-AEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAMS-DEDRQILKAALQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSLG 1158
            G+++ EL R+  P+E A +LP AAYT+PD++D E++ I RK W+ V R +QV  PGDY+C+  + QP+++VR  DG++   + VCLHRA P+ EG+GN   F CPYH W+Y   G+L  AP+M+ AEGF+   C+LP+L  E+WEGFV VN D DA   +P++ + Q    N+  D  V+ +T+EFDSPWNWK+LVENFMEAYHHI  HK TFEPVYPA+ S IP+  G P+ +L MP K     D     L   L++ Q+ +LLA  ++P  L A   T+  WYQ+ P + + + L+IH L P  +A   + DE  +   A L  IH EDI  N+  W GL+APLT QGRLS  E+SIWQLNQ W  +L 
Sbjct:   10 GLSAEELSRVSAPLEEAWTLPTAAYTDPDLYDVEIERIMRKNWLPVGRADQVPNPGDYICITLYDQPLMLVRGTDGEVRVMSRVCLHRAAPIAEGAGNRKLFSCPYHAWSYATDGQLIRAPLMDGAEGFDEKSCKLPTLRTEIWEGFVMVNFDNDAEAFAPQVASYQDTFSNYKLDDMVIIKTLEFDSPWNWKVLVENFMEAYHHIAIHKETFEPVYPAKDSKIPNASG-PYSILHMPAKEPHGNDPDGLPLIEGLEDWQRDDLLATVLFPYFLLAFQGTSATWYQITPVSVDRLHLQIHFLVPKSSAKLPNIDEIAEGAGALLSVIHHEDIEANDMVWEGLKAPLTSQGRLSPLERSIWQLNQWWLRALS 379          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A1D2TQE4_9CAUL (Rieske domain-containing protein n=1 Tax=Phenylobacterium sp. SCN 69-14 TaxID=1660128 RepID=A0A1D2TQE4_9CAUL)

HSP 1 Score: 367 bits (942), Expect = 4.480e-122
Identity = 181/388 (46.65%), Postives = 235/388 (60.57%), Query Frame = 1
Query:    1 ATTAKTRGDPMSEASRLGINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAM-SDEDRQILKAALQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSLGI 1161
            A T   R   M E+S  G+ + E++R R P+E A +LPPAAY  PD++D EV+ I R+ W  +AR EQ  +PGDY+ +DF GQP+++V  LDG+  A A+VC HRA PV EG G    F CPYH W+Y+  G L +AP+M+  EGF  +DCRL  +  EVWEGFV VN DPDAAP +P++  L+   + F   +  V  T+ +DS WNWK+LVENFMEAYHH+  H  T EPV+ AR S +PD+DG PW +L MP  A   D     L   L++ Q   L A   +P  LFA       WYQ+ P       L IH  AP        +DE    L+ A  AIH EDI VN+  WRG+ AP+T QGRLS  E+SIWQ+NQ W   +G+
Sbjct:    2 AQTGGFREGKMDESSLPGVGAEEIERARAPLERAWTLPPAAYVRPDIYDLEVERILRRSWAPLARTEQAPEPGDYIAMDFMGQPVLLVHGLDGRFRAMANVCRHRAAPVAEGVGRRKLFTCPYHAWSYDTEGRLVAAPLMDGVEGFAPEDCRLGQIRTEVWEGFVMVNLDPDAAPFAPQVEPLRSYFQAFRMGEMAVVRTLTYDSGWNWKVLVENFMEAYHHLAAHAQTLEPVFHARDSEVPDSDG-PWSILHMP--AATPDASRERLVQGLEDWQAQSLFAAVAFPHFLFALHGDGMAWYQVLPQTAGRFTLNIHICAPRYLLELEGADEIIAALEQATAAIHAEDIAVNDLVWRGMSAPMTGQGRLSPLERSIWQMNQWWLTQMGL 386          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A059FNK6_9PROT (Rieske (2Fe-2S) domain-containing protein n=1 Tax=Hyphomonas johnsonii MHS-2 TaxID=1280950 RepID=A0A059FNK6_9PROT)

HSP 1 Score: 367 bits (941), Expect = 5.190e-122
Identity = 178/375 (47.47%), Postives = 237/375 (63.20%), Query Frame = 1
Query:   52 GINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYP--RLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPP-----EAAAAMSDEDRQILKAALQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSL 1155
            GI++AE+DR   P+  A +LPPAAY   DVF  EV+ IFR++W+ +AR +QV +PGD+L +D FGQP++IV   DG++   +  CLHRA  VVEG+GN   F CPYH W+Y+  G+L  AP+ME AEGF+   CRLP +  E+W+GF+  N DPDAAP +P+    +   + F  +  VV  T+E+DS WNWK+LVENFMEAYHHIG H  TFEP Y AR S +PDNDG PW +L MP    A ++   GL P   L++ Q  +L A  +YP  L     +   WYQ+ P A   M+L+IH   P      E    ++DE    +   + AIH+EDI  N   W+GL APLTRQGRLS  EK+IWQ N  W +++
Sbjct:    7 GISTAEIDRAARPLAQAMTLPPAAYIREDVFGLEVERIFRRRWLPLARVDQVAKPGDFLSMDVFGQPVMIVHGQDGEIRVMSRTCLHRAAQVVEGNGNRKLFTCPYHAWSYDTAGQLVRAPLMEGAEGFSESGCRLPQVRTEIWQGFILANFDPDAAPFAPQARTFETYFEKFRLEDMVVVRTLEYDSDWNWKVLVENFMEAYHHIGVHPETFEPAYHARDSRVPDNDG-PWSILHMP---AAHEEVPLGLPPVEGLEDWQVRDLFASVLYPHFLLGVQGSVVTWYQVFPEAAGKMKLKIHICVPGAYTGFEGFDQIADE----ISRMVAAIHDEDIGANHTVWKGLNAPLTRQGRLSPLEKAIWQFNTWWLETM 373          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A328BAT4_9CAUL (Rieske domain-containing protein n=1 Tax=Phenylobacterium kunshanense TaxID=1445034 RepID=A0A328BAT4_9CAUL)

HSP 1 Score: 360 bits (923), Expect = 2.750e-119
Identity = 170/372 (45.70%), Postives = 230/372 (61.83%), Query Frame = 1
Query:   52 GINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAMSDEDRQILKAALQA---IHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSLG 1158
            G+++ EL   R P+E A +LPPAAY   DV+  EV+ +FR+ W  +AR +Q+ +PGDYL +D  GQP+++V   DG     ++VCLHRA  + EGSG    F CPYH W Y+  G+L +AP+ME A+GF  + CRLP +  EVWEGF+  N DP+A P +P+   L+   + ++    VV  T+ ++S WNWK+LVENFMEAYHHIGPH  TFEPV+ AR S +PDN+G PW +L MP    A   H   +   L++ Q   L A   +P  +FA       WYQ+ P A + + L+IH   P    A    +  QI++A+ Q    IH+EDI  N+  WRGL AP+TRQGRLS  E SIWQLNQ W   +G
Sbjct:    8 GMSADELALARRPLEQAWTLPPAAYVRDDVYGLEVERVFRRTWTPLARVDQLPEPGDYLTVDLMGQPLLVVHGADGAFRVMSNVCLHRAAAIAEGSGRRKLFTCPYHSWAYDTAGQLVAAPLMEGADGFAPEGCRLPQVRTEVWEGFILANLDPEAEPFAPQAEGLRSYFERYNMADMVVARTLTYESGWNWKVLVENFMEAYHHIGPHAQTFEPVFHARDSKVPDNEGQPWSILHMPAADPAAAGHGERMVQGLEDWQAGALFAAVAFPHFMFALHGNGMAWYQVFPEAADRLVLKIHVCVP--GFARQLPDYEQIVEASAQFTDHIHQEDIAANDLVWRGLTAPMTRQGRLSPLEASIWQLNQWWLGRMG 377          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A522CJ28_9CAUL (Aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A522CJ28_9CAUL)

HSP 1 Score: 357 bits (916), Expect = 2.760e-118
Identity = 178/372 (47.85%), Postives = 228/372 (61.29%), Query Frame = 1
Query:   52 GINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAMSDEDRQILKAAL---QAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSLG 1158
            GI + E++R   P   A +LPPAAY   DV+  EVD IFR+ W+ VAR +QV  PGDYL  D  GQP+V+VR LDG +   ++VCLHRA P+VEG G +  F CPYH W Y+  G L +AP+ME AE F   DCRLP    E+WEGF+    DPDAAP +P++ +L +   N+   + VV  T+ ++S WNWK+LVENFMEAYHHIG H  TFEPV+ AR S + D DG PW +L MP  A   D    GL P L+  Q   L A  ++P  L A  A    WYQ+ P     M L IH   P EA   + D D  I+ A++     +H EDI  N+  WRGL AP+TRQGRLS  E+++W+LN+ W   LG
Sbjct:    7 GITAEEIERAARPAAQAWTLPPAAYLRDDVYALEVDRIFRRSWLPVARVDQVPGPGDYLAADLSGQPVVVVRGLDGAIRVMSNVCLHRAAPIVEGHGRSKLFTCPYHSWAYDTEGRLVAAPLMEGAEDFRPADCRLPQARTEIWEGFIMATLDPDAAPFTPQVESLSRYFANYRLAEMVVARTLTYESDWNWKVLVENFMEAYHHIGVHPQTFEPVFHARDSKVVDGDG-PWSILHMP--AADPDAPHPGLVPGLEPWQAGALFAAAIFPHFLIAPHANGMAWYQILPRGAARMTLNIHVCVPGEARD-LKDFDA-IVDASVAFTDQVHREDIAANDLVWRGLNAPMTRQGRLSPLERAVWKLNRWWLQRLG 373          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A059E1Y3_9PROT (Rieske domain-containing protein n=8 Tax=root TaxID=1 RepID=A0A059E1Y3_9PROT)

HSP 1 Score: 352 bits (903), Expect = 2.550e-116
Identity = 169/372 (45.43%), Postives = 232/372 (62.37%), Query Frame = 1
Query:   52 GINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYPR--LDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAMS--DEDRQILKAALQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSL 1155
            G+   E+ R+R P+E A +LPPAAY + D++  E D I RK W+ +AR +Q+  PGD++ LD FGQP+++V   DG++   +  CLHRA  + +G+GN   F CPYH W+Y+ +G+L  AP+M+ AE F   +CRLP L +E+WEGFV  N DPDAAP +P +   ++  + F      V  T+EFDS WNWK+LVENFMEAYHHI  H  TFEP Y AR S++PDNDG PW +L MP    A ++   GL P   L++ Q  +L A  ++P  L     +   WYQ+ P     + L+IH +  P A + M   DE  + +   + AIH EDI  N+  W+GL AP+TRQGRLS  EK+IWQ NQ W D +
Sbjct:    7 GLTPEEIGRVRKPLEQAYTLPPAAYLDEDLYARETDQILRKSWLPLARIDQIATPGDFVSLDLFGQPVMVVHGHDGEVRVMSRTCLHRAALLADGNGNRKLFTCPYHAWSYDTSGQLVRAPLMDGAEQFAESNCRLPQLRMEIWEGFVLANFDPDAAPFAPPVETFRKYFEKFRLADVKVVHTLEFDSDWNWKVLVENFMEAYHHIATHSETFEPAYHARDSHVPDNDG-PWSILHMP---AAHEELPPGLPPLEGLEDWQARDLFATAIFPHFLLGIQGSVVTWYQVFPQGAGKLHLKIH-ICVPAAFSEMEGFDEIAEGMALMVSAIHHEDIGANDLVWQGLNAPMTRQGRLSPLEKAIWQYNQWWLDKM 373          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A845QDE4_9HYPH (Rieske 2Fe-2S domain-containing protein n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QDE4_9HYPH)

HSP 1 Score: 352 bits (903), Expect = 2.640e-116
Identity = 166/368 (45.11%), Postives = 224/368 (60.87%), Query Frame = 1
Query:   76 RIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVE-GSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHAL-----APPEAAAAMSDEDRQILKAALQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSLGI 1161
            R R P+ +A +LPP AY +P +F AE   +F   W+ +AR +Q+ +PGDY+ +D   QP+++V  +DG++   ++VCLHRA P+ E G G+   F CPYH W+Y+  G+L  AP+M+ A+ F+T +CRLP L  E+W+GF+    D  AAP +P++      +  +  D   +  T++F   WNWK+LVENFMEAYHHI  H  T EPV+ AR S+IPDNDG PW +L MP  A     H  G  P L + Q H+LLA  ++P  L        VWYQL P AH+ + LRIH L      PPEA     DE    + A +  IHEEDI  N   W+GL APLT QGRLS  EKSIWQ+NQ W   +G+
Sbjct:   15 RARAPLASAATLPPQAYRDPAIFAAERACLFASAWLPLARLDQIPEPGDYIAMDLMDQPVLVVHGMDGEIRVLSNVCLHRAAPLAEPGPGHRRLFSCPYHAWSYDTEGQLIRAPLMDGADHFDTRNCRLPQLRSEIWQGFILATLDETAAPFAPQVTGFTDYVAPYRLDDMAIARTLDFPGHWNWKVLVENFMEAYHHIATHSATLEPVFHARDSHIPDNDGQPWSILHMPA-ADVSGPHPEGTLPGLTDAQAHDLLATVLFPHFLLGIQGNGAVWYQLLPRAHDEVDLRIHVLLPRSTVPPEA----WDETADAVAALVTVIHEEDIAANNLVWQGLTAPLTTQGRLSPLEKSIWQMNQWWLTRMGL 377          
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Match: A0A812IKZ4_9DINO (Choline monooxygenase, chloroplastic n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812IKZ4_9DINO)

HSP 1 Score: 347 bits (889), Expect = 3.810e-114
Identity = 170/370 (45.95%), Postives = 231/370 (62.43%), Query Frame = 1
Query:   52 GINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQWICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVVEGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEVWEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWKILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGAEDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNAMRLRIHALAPPEAAAAMSDEDRQILKAA--LQAIHEEDIVVNEGPWRGLQAPLTRQGRLSLYEKSIWQLNQLWADSL 1155
            GI++ E+ + RLP+ +  +LP AAYT+ +++  E + I RK W+ +AR +QV + G YL LD  GQP+++V   D ++   +SVCLHR  P+ +GSG    F CPYH W+Y+ TG+LR AP+ME AE F  +  RLP +  EVWEGF+  N DPDA PL+P++       KNF      V +T+ FDS WNWK+LVENFMEAYHHI  H  TFEPV+ AR S +PDN G PW +L MP  A  E    S     L++ Q  +L A  ++P  +         WYQ+ P+A N + L+IH L  P++AA  +D +  + + A  + AIH+EDI  N+  W GL AP+T QGRLS  EKSIWQLNQ W D +
Sbjct:   10 GIHTDEIAKARLPLPSGYTLPRAAYTSKEIYALECEHILRKSWLPIARIDQVPEHGSYLTLDLLGQPVMVVHGADDEIRVMSSVCLHRGAPIAQGSGKRNVFTCPYHAWSYDTTGQLRRAPLMEGAEDFTENAHRLPQIRSEVWEGFILANLDPDAQPLAPQIAAFTDYFKNFQMGDMFVAKTLTFDSGWNWKVLVENFMEAYHHIAIHSTTFEPVFHARDSRVPDNTG-PWSILHMPA-AFEEMPPGSATIAGLEDWQAKDLFASVIFPHFMLGIHGQGAAWYQVIPAAANHLTLKIH-LMMPKSAAEHADFESMVAEMAESVSAIHQEDIEANDLVWVGLNAPMTEQGRLSPLEKSIWQLNQWWLDKM 376          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1583.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E6LQN5_9GAMM2.410e-16562.33Rieske domain-containing protein n=2 Tax=Gammaprot... [more]
A0A355T6G0_9HYPH8.730e-12548.11Rieske domain-containing protein n=1 Tax=Rhodobiac... [more]
A0A2Z4UNU3_9HYPH3.080e-12447.71Anthranilate 1,2-dioxygenase large subunit n=1 Tax... [more]
A0A1D2TQE4_9CAUL4.480e-12246.65Rieske domain-containing protein n=1 Tax=Phenyloba... [more]
A0A059FNK6_9PROT5.190e-12247.47Rieske (2Fe-2S) domain-containing protein n=1 Tax=... [more]
A0A328BAT4_9CAUL2.750e-11945.70Rieske domain-containing protein n=1 Tax=Phenyloba... [more]
A0A522CJ28_9CAUL2.760e-11847.85Aromatic ring-hydroxylating dioxygenase subunit al... [more]
A0A059E1Y3_9PROT2.550e-11645.43Rieske domain-containing protein n=8 Tax=root TaxI... [more]
A0A845QDE4_9HYPH2.640e-11645.11Rieske 2Fe-2S domain-containing protein n=1 Tax=Py... [more]
A0A812IKZ4_9DINO3.810e-11445.95Choline monooxygenase, chloroplastic n=1 Tax=Symbi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1583contigP-littoralis_Contig1583:6102..7265 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1282876.BAOK01000002_gene251
PFAMsRieske,Ring_hydroxyl_A
Model size1164
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K22443
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.75e-126
EggNOG OGsCOG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TVNW@28211|Alphaproteobacteria,4BS8D@82117|unclassified Alphaproteobacteria
EC1.14.13.239
DescriptionRing hydroxylating alpha subunit (catalytic domain)
Cds size1134
COG categoryP
BRITEko00000,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789757.59844-UTR-P-littoralis_Contig1583:6101..61311680789757.59844-UTR-P-littoralis_Contig1583:6101..6131Pylaiella littoralis U1_48UTRP-littoralis_Contig1583 6102..6131 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789757.6087146-CDS-P-littoralis_Contig1583:6131..72651680789757.6087146-CDS-P-littoralis_Contig1583:6131..7265Pylaiella littoralis U1_48CDSP-littoralis_Contig1583 6132..7265 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1583.3.1prot_P-littoralis_Contig1583.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1583 6132..7265 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1583.3.1

>prot_P-littoralis_Contig1583.3.1 ID=prot_P-littoralis_Contig1583.3.1|Name=mRNA_P-littoralis_Contig1583.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=378bp
MSEASRLGINSAELDRIRLPIEAACSLPPAAYTNPDVFDAEVDAIFRKQW
ICVARQEQVVQPGDYLCLDFFGQPIVIVRDLDGQLHAHASVCLHRAQPVV
EGSGNATRFVCPYHHWTYELTGELRSAPMMENAEGFNTDDCRLPSLALEV
WEGFVFVNQDPDAAPLSPRLVNLQQLIKNFDFDQQVVTETIEFDSPWNWK
ILVENFMEAYHHIGPHKHTFEPVYPARQSYIPDNDGAPWVVLRMPEKAGA
EDDHSSGLYPRLDETQQHELLAMCVYPTLLFAASATTCVWYQLEPSAHNA
MRLRIHALAPPEAAAAMSDEDRQILKAALQAIHEEDIVVNEGPWRGLQAP
LTRQGRLSLYEKSIWQLNQLWADSLGI*
back to top

mRNA from alignment at P-littoralis_Contig1583:6102..7265+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1583.3.1 ID=mRNA_P-littoralis_Contig1583.3.1|Name=mRNA_P-littoralis_Contig1583.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1164bp|location=Sequence derived from alignment at P-littoralis_Contig1583:6102..7265+ (Pylaiella littoralis U1_48)
GCAACAACAGCAAAAACAAGAGGGGACCCGATGAGTGAAGCCTCCCGGCT CGGCATCAATTCAGCAGAGCTTGATCGAATCCGCCTACCCATTGAGGCCG CCTGCTCATTGCCGCCAGCAGCCTACACTAATCCTGACGTGTTTGATGCC GAAGTTGACGCCATCTTCAGGAAACAGTGGATCTGTGTCGCCAGACAAGA GCAGGTTGTGCAGCCCGGTGATTACCTGTGTCTGGATTTTTTCGGCCAAC CGATCGTCATCGTCCGAGATCTTGATGGTCAGCTGCACGCACACGCCAGT GTCTGTCTGCATCGCGCACAACCTGTGGTTGAAGGCAGCGGTAATGCCAC TCGATTTGTCTGTCCTTATCACCATTGGACCTACGAGTTGACCGGTGAAC TGCGCAGCGCACCGATGATGGAAAATGCCGAGGGTTTCAACACCGATGAT TGCAGGTTGCCGTCGCTGGCTCTTGAGGTCTGGGAAGGCTTTGTGTTCGT GAATCAGGATCCTGATGCGGCGCCCCTGTCACCTCGTCTGGTGAACCTCC AACAGCTGATCAAAAACTTTGACTTTGATCAGCAGGTGGTGACCGAAACC ATTGAGTTCGACAGCCCCTGGAACTGGAAAATCCTGGTTGAGAATTTCAT GGAGGCTTACCACCACATTGGACCTCACAAGCACACGTTCGAGCCTGTTT ACCCTGCCAGGCAATCCTACATCCCTGACAATGATGGCGCGCCCTGGGTG GTGCTGCGGATGCCGGAAAAAGCCGGTGCAGAAGATGATCACTCGTCCGG ACTCTATCCTCGCCTGGATGAAACCCAGCAGCACGAGCTGCTTGCCATGT GCGTTTATCCCACCCTGCTTTTTGCAGCATCCGCGACAACCTGCGTCTGG TACCAGCTGGAACCTTCAGCCCACAATGCCATGCGACTCAGAATCCACGC GCTGGCGCCGCCAGAGGCGGCAGCGGCCATGAGTGATGAAGACCGTCAGA TACTGAAAGCAGCACTTCAGGCCATCCACGAAGAAGATATCGTGGTAAAC GAGGGGCCCTGGCGGGGGTTGCAGGCTCCGCTGACCCGGCAGGGGCGGCT CAGTCTTTACGAGAAATCGATCTGGCAATTGAACCAGTTGTGGGCAGACT CCCTGGGCATCTGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1583:6102..7265+

>mRNA_P-littoralis_Contig1583.3.1 ID=mRNA_P-littoralis_Contig1583.3.1|Name=mRNA_P-littoralis_Contig1583.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1134bp|location=Sequence derived from alignment at P-littoralis_Contig1583:6102..7265+ (Pylaiella littoralis U1_48)
ATGAGTGAAGCCTCCCGGCTCGGCATCAATTCAGCAGAGCTTGATCGAAT
CCGCCTACCCATTGAGGCCGCCTGCTCATTGCCGCCAGCAGCCTACACTA
ATCCTGACGTGTTTGATGCCGAAGTTGACGCCATCTTCAGGAAACAGTGG
ATCTGTGTCGCCAGACAAGAGCAGGTTGTGCAGCCCGGTGATTACCTGTG
TCTGGATTTTTTCGGCCAACCGATCGTCATCGTCCGAGATCTTGATGGTC
AGCTGCACGCACACGCCAGTGTCTGTCTGCATCGCGCACAACCTGTGGTT
GAAGGCAGCGGTAATGCCACTCGATTTGTCTGTCCTTATCACCATTGGAC
CTACGAGTTGACCGGTGAACTGCGCAGCGCACCGATGATGGAAAATGCCG
AGGGTTTCAACACCGATGATTGCAGGTTGCCGTCGCTGGCTCTTGAGGTC
TGGGAAGGCTTTGTGTTCGTGAATCAGGATCCTGATGCGGCGCCCCTGTC
ACCTCGTCTGGTGAACCTCCAACAGCTGATCAAAAACTTTGACTTTGATC
AGCAGGTGGTGACCGAAACCATTGAGTTCGACAGCCCCTGGAACTGGAAA
ATCCTGGTTGAGAATTTCATGGAGGCTTACCACCACATTGGACCTCACAA
GCACACGTTCGAGCCTGTTTACCCTGCCAGGCAATCCTACATCCCTGACA
ATGATGGCGCGCCCTGGGTGGTGCTGCGGATGCCGGAAAAAGCCGGTGCA
GAAGATGATCACTCGTCCGGACTCTATCCTCGCCTGGATGAAACCCAGCA
GCACGAGCTGCTTGCCATGTGCGTTTATCCCACCCTGCTTTTTGCAGCAT
CCGCGACAACCTGCGTCTGGTACCAGCTGGAACCTTCAGCCCACAATGCC
ATGCGACTCAGAATCCACGCGCTGGCGCCGCCAGAGGCGGCAGCGGCCAT
GAGTGATGAAGACCGTCAGATACTGAAAGCAGCACTTCAGGCCATCCACG
AAGAAGATATCGTGGTAAACGAGGGGCCCTGGCGGGGGTTGCAGGCTCCG
CTGACCCGGCAGGGGCGGCTCAGTCTTTACGAGAAATCGATCTGGCAATT
GAACCAGTTGTGGGCAGACTCCCTGGGCATCTGA
back to top