mRNA_P-littoralis_Contig1560.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1560.1.1
Unique NamemRNA_P-littoralis_Contig1560.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A2E8J725_9GAMM (Elongation factor G n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8J725_9GAMM)

HSP 1 Score: 520 bits (1340), Expect = 1.640e-179
Identity = 258/292 (88.36%), Postives = 278/292 (95.21%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRTG 876
            ERMEFPEPVIHVAVEP+S+ADQEKM VALGKLAAEDPSF VRTDEESGQTIIGGMGELHLDI+VDRMKREFSVEANIGKPQVAYRETIR+ VESEGKFVRQTGGRGQYGHVWLK+EP+E   YEFVDEIVGGVVPREYI+AVDKG+ +Q+ +GV+AGYPLQGVK TLFDGSYHDVDSSEV+FKVAGSMAL+SGALDA PVLLEP+MKVEVVTPEDY+GDI+GDLNRRRGIVLGMEDV AGK+VRA VPMSEMFGYATDMRSATQGRATFSMEFEKY EVPD+IAEAVIS+ G
Sbjct:  407 ERMEFPEPVIHVAVEPKSKADQEKMGVALGKLAAEDPSFSVRTDEESGQTIIGGMGELHLDILVDRMKREFSVEANIGKPQVAYRETIRDTVESEGKFVRQTGGRGQYGHVWLKLEPMEDAEYEFVDEIVGGVVPREYINAVDKGVSEQMASGVIAGYPLQGVKVTLFDGSYHDVDSSEVSFKVAGSMALRSGALDARPVLLEPVMKVEVVTPEDYFGDIVGDLNRRRGIVLGMEDVAAGKAVRAEVPMSEMFGYATDMRSATQGRATFSMEFEKYKEVPDSIAEAVISKAG 698          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A7C7S7J8_9GAMM (Elongation factor G n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7S7J8_9GAMM)

HSP 1 Score: 520 bits (1338), Expect = 3.190e-179
Identity = 253/292 (86.64%), Postives = 276/292 (94.52%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRTG 876
            ERMEFPEPVIHVAVEPR+QADQEKM +ALGKLAAEDPSFRV TD+ESGQTIIGGMGELHLDIIVDRMKREF VEANIGKPQVAYRETIR  V SEGKF+RQTGGRGQYGHVW+KIEP+EG+GYEFVD IVGGVVPREYI+AVDKGI DQL+NGVLAGYPLQGV+ATL+DGSYHDVDSSEVAFKVAGSMA+++G LDA PVLLEP+M VEVVTPE+YYGD++GDLNRRRGIV GMEDVPAGK+VRA VP++EMFGYATDMRSATQGRA FSMEF KYSEVPD+IAE+VISR G
Sbjct:  406 ERMEFPEPVIHVAVEPRTQADQEKMGIALGKLAAEDPSFRVHTDQESGQTIIGGMGELHLDIIVDRMKREFGVEANIGKPQVAYRETIRETVNSEGKFIRQTGGRGQYGHVWIKIEPVEGDGYEFVDAIVGGVVPREYINAVDKGIHDQLSNGVLAGYPLQGVRATLYDGSYHDVDSSEVAFKVAGSMAMRAGGLDARPVLLEPVMDVEVVTPEEYYGDVVGDLNRRRGIVQGMEDVPAGKAVRAEVPLAEMFGYATDMRSATQGRANFSMEFSKYSEVPDSIAESVISRNG 697          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A2E3WFU7_9GAMM (Elongation factor G n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E3WFU7_9GAMM)

HSP 1 Score: 516 bits (1330), Expect = 5.340e-178
Identity = 255/292 (87.33%), Postives = 276/292 (94.52%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRTG 876
            ERMEFP+PVIHVAVEP+S+ADQEKM VALGKLAAEDPSF VRTD+ESGQTIIGGMGELHLDIIVDRMKREFSVEANIG+PQVAYRETIR+ VESEGKFVRQTGGRGQYGHVWLKIEP++   YEFVDEIVGGVVPREYI AVDKGIQ+QL NGV+AGYPLQGVKA L+DGSYHDVDSSEVAFKVAGSMA++ GALDA+PVLLEP+MKVEVVTPEDYYGDI+GDLNRRRGIVLGMEDVPAGK+VRA VP+SEMFGYATDMRSATQGRATFSMEF  Y EVPD+IAEAV+ + G
Sbjct:  407 ERMEFPDPVIHVAVEPKSKADQEKMGVALGKLAAEDPSFTVRTDDESGQTIIGGMGELHLDIIVDRMKREFSVEANIGQPQVAYRETIRSTVESEGKFVRQTGGRGQYGHVWLKIEPLKEGDYEFVDEIVGGVVPREYIGAVDKGIQEQLANGVIAGYPLQGVKAILYDGSYHDVDSSEVAFKVAGSMAMRQGALDANPVLLEPVMKVEVVTPEDYYGDIVGDLNRRRGIVLGMEDVPAGKAVRAEVPLSEMFGYATDMRSATQGRATFSMEFHSYKEVPDSIAEAVVKKEG 698          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A2D8QSE7_9GAMM (Elongation factor G n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D8QSE7_9GAMM)

HSP 1 Score: 515 bits (1326), Expect = 2.090e-177
Identity = 258/292 (88.36%), Postives = 272/292 (93.15%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRTG 876
            ERMEFPEPVIHVAVEPRSQADQEKM  ALGKLAAEDPSF VRTDEESGQTIIGGMG L LDIIVDRMKREFSVEANIGKPQVAYRETIR  V++EGKFVRQTGGRGQYGHVWL IEPIEGEGYEFVDEIVGG VPREYISAVDKGIQDQL NGVLAGYPLQGV+A LFDGSYHDVDSSEVAFKVAGSMA K+GALDA PVLLEP+M VEVVTPEDYYGD++GDLNRRRG+V GMEDVPAGK+VRA VP++EMFGYATD+RSATQGRATFSMEF  YSEVPD+IAE V+SR G
Sbjct:  406 ERMEFPEPVIHVAVEPRSQADQEKMGXALGKLAAEDPSFSVRTDEESGQTIIGGMGXLXLDIIVDRMKREFSVEANIGKPQVAYRETIRKXVKAEGKFVRQTGGRGQYGHVWLHIEPIEGEGYEFVDEIVGGAVPREYISAVDKGIQDQLANGVLAGYPLQGVRAILFDGSYHDVDSSEVAFKVAGSMAXKAGALDASPVLLEPVMNVEVVTPEDYYGDVVGDLNRRRGVVQGMEDVPAGKAVRAEVPLAEMFGYATDVRSATQGRATFSMEFCTYSEVPDSIAEVVMSRMG 697          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A3C0L654_9GAMM (Elongation factor G n=4 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0L654_9GAMM)

HSP 1 Score: 512 bits (1318), Expect = 3.490e-176
Identity = 253/290 (87.24%), Postives = 275/290 (94.83%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISR 870
            ERM+FPEPVIHVAVEPRSQADQEKM VAL KLAAEDPSFRVRTDE+SGQ IIGGMGELHLDIIVDRM+REF+VEANIGKPQVAYRETIR AVESEGKFVRQTGGRGQYGHVWLK+EPIEG  +EFVD IVGGVVPRE+ISAV KG ++Q+ NGVLAGYPLQGV+ATL+DGSYHDVDSSEVAFKVA SMA+KSGAL+ADPVLLEP+MKVEVVTPE++YGDIIGDLNRRRG+VLGMEDVP+GKSVRA VPMSEMFGYATDMRSATQGRATFSMEFEKY EVP  +AEA+IS+
Sbjct:  407 ERMDFPEPVIHVAVEPRSQADQEKMGVALSKLAAEDPSFRVRTDEDSGQIIIGGMGELHLDIIVDRMRREFAVEANIGKPQVAYRETIRKAVESEGKFVRQTGGRGQYGHVWLKLEPIEGPEFEFVDNIVGGVVPREFISAVAKGAEEQMGNGVLAGYPLQGVRATLYDGSYHDVDSSEVAFKVAASMAVKSGALEADPVLLEPVMKVEVVTPEEHYGDIIGDLNRRRGVVLGMEDVPSGKSVRAEVPMSEMFGYATDMRSATQGRATFSMEFEKYKEVPSNVAEAIISK 696          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A2D7FWH4_9GAMM (Elongation factor G n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A2D7FWH4_9GAMM)

HSP 1 Score: 508 bits (1307), Expect = 1.610e-174
Identity = 251/291 (86.25%), Postives = 274/291 (94.16%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRT 873
            ERM+FPEPVIHVAVEPRSQADQEKM VAL KLAAEDPSFRVRTDE+SGQTIIGGMGELHLDIIVDRM+REFSVEANIGKPQVAYRETIRN VE+EGKFVRQ+GGRGQYGHVWLK+EPI    +EFVD IVGGVVPREYI+AV KG ++Q+ NGVLAGYPLQGVKATL+DGSYHDVDSSEVAFKVA SMALK+GALDA+PVLLEP+MKVEVVTPE++YGDIIGDLNRRRG+VLGMEDVPAGKSVRA VP+SEMFGYATDMRSATQGRATFSMEFE Y EVP  +AEA+IS++
Sbjct:  407 ERMDFPEPVIHVAVEPRSQADQEKMGVALSKLAAEDPSFRVRTDEDSGQTIIGGMGELHLDIIVDRMRREFSVEANIGKPQVAYRETIRNTVEAEGKFVRQSGGRGQYGHVWLKLEPISDNDFEFVDAIVGGVVPREYIAAVAKGAEEQMANGVLAGYPLQGVKATLYDGSYHDVDSSEVAFKVAASMALKAGALDANPVLLEPVMKVEVVTPEEHYGDIIGDLNRRRGVVLGMEDVPAGKSVRAEVPLSEMFGYATDMRSATQGRATFSMEFETYKEVPSNVAEAIISKS 697          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A2E8VPB5_9GAMM (Elongation factor G n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8VPB5_9GAMM)

HSP 1 Score: 506 bits (1302), Expect = 8.370e-174
Identity = 249/290 (85.86%), Postives = 273/290 (94.14%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISR 870
            ERMEFPEPVIHVAVEP++++DQEKM VALGKLAAEDPSF VRTDEESGQTIIGGMGELHLDIIVDRMKREF VEANIGKPQVAYRETIR+ VE EGKFVRQTGGRGQYGHVWL+IEP+E  GYEFVDEIVGGVVPREYI AV+KGI++QL NGVLAGYPL+GVKATL+DGSYHDVDSSEVAFKVAGSMA++ GAL+A+PVLLEPI KVEVVTPEDYYGD+IGDLNRRRGIVLGMED  AGK+VRA VP+SEMFGYATD+RS TQGRATFSMEFEKY +VPD+IAE VI++
Sbjct:  406 ERMEFPEPVIHVAVEPKTKSDQEKMGVALGKLAAEDPSFSVRTDEESGQTIIGGMGELHLDIIVDRMKREFQVEANIGKPQVAYRETIRSTVEQEGKFVRQTGGRGQYGHVWLRIEPLEDGGYEFVDEIVGGVVPREYIGAVNKGIEEQLANGVLAGYPLEGVKATLYDGSYHDVDSSEVAFKVAGSMAMREGALNANPVLLEPIFKVEVVTPEDYYGDVIGDLNRRRGIVLGMEDTVAGKAVRAEVPLSEMFGYATDLRSQTQGRATFSMEFEKYKDVPDSIAETVINK 695          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A2D9SPD9_9GAMM (Elongation factor G n=2 Tax=root TaxID=1 RepID=A0A2D9SPD9_9GAMM)

HSP 1 Score: 499 bits (1286), Expect = 2.410e-171
Identity = 245/291 (84.19%), Postives = 271/291 (93.13%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRT 873
            ERMEFP+PVIHVAVEPRSQADQEKM VAL KLA EDPSFRVRT+EE+GQTIIGGMGELHLDIIVDRM+REF+V+ANIGKPQVAYRETIR  VESE KF+RQTGGRGQYGHVWL++EP+EGEGYEF D IVGG VPREYISAVDKGI++Q+NNGVLAGY L G+KA LFDGSYHDVDS EVAFKVAGS+ALK GAL A PVLLEP+MKVEVVTPE+++GDI+GDLNRRRGIVLGMEDV AGK+VRA VP+SEMFGYATDMRSATQGRATF+MEFEKY EVPD +AEAVIS++
Sbjct:  407 ERMEFPDPVIHVAVEPRSQADQEKMGVALSKLATEDPSFRVRTEEETGQTIIGGMGELHLDIIVDRMRREFNVDANIGKPQVAYRETIRQTVESEAKFIRQTGGRGQYGHVWLRLEPLEGEGYEFEDAIVGGAVPREYISAVDKGIREQMNNGVLAGYSLVGIKAVLFDGSYHDVDSREVAFKVAGSIALKDGALKARPVLLEPVMKVEVVTPEEHFGDIVGDLNRRRGIVLGMEDVAAGKAVRAQVPLSEMFGYATDMRSATQGRATFAMEFEKYKEVPDNVAEAVISKS 697          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A2E3D7L0_9GAMM (Elongation factor G n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E3D7L0_9GAMM)

HSP 1 Score: 496 bits (1278), Expect = 3.560e-170
Identity = 243/290 (83.79%), Postives = 273/290 (94.14%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISR 870
            E+M+FP+PVIHVAVEPRS  DQEKM +ALGKLAAEDPSF VRTDEESGQTIIGGMGELHLDIIVDRMKREF+VEANIGKPQVAYRETIR  VE+EGKFVRQ+GGRGQYGHVWL+IEPIE +GYEFVD IVGG VP+EYISAVDKGIQDQL++GV+AGYPLQGV+ATL+DGSYHDVDSSEV+FKVAGSMA+++G L+ADPVLLEPIM VEVVTPE+YYGDI+GDL+RRRGIV GMEDV AGK+VRA VP+SEMFGYATDMRSATQGRATFSMEF+KY EVP  I+E+++SR
Sbjct:  406 EKMDFPDPVIHVAVEPRSTIDQEKMGIALGKLAAEDPSFSVRTDEESGQTIIGGMGELHLDIIVDRMKREFNVEANIGKPQVAYRETIRKMVEAEGKFVRQSGGRGQYGHVWLRIEPIEHDGYEFVDMIVGGAVPKEYISAVDKGIQDQLSSGVVAGYPLQGVRATLYDGSYHDVDSSEVSFKVAGSMAIRAGVLEADPVLLEPIMDVEVVTPEEYYGDIVGDLSRRRGIVQGMEDVAAGKAVRAEVPLSEMFGYATDMRSATQGRATFSMEFKKYGEVPPNISESLVSR 695          
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Match: A0A1Z8RL74_9GAMM (Elongation factor G n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z8RL74_9GAMM)

HSP 1 Score: 495 bits (1274), Expect = 1.520e-169
Identity = 244/292 (83.56%), Postives = 270/292 (92.47%), Query Frame = 1
Query:    1 ERMEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTIIGGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQTGGRGQYGHVWLKIEPIEG-EGYEFVDEIVGGVVPREYISAVDKGIQDQLNNGVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLLEPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEMFGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRT 873
            ERMEFP+PVI VAVEPRSQADQEKM++ALGKLAAEDPSF+V TDEESGQT+I GMGEL LDIIVDRMKREFSV+ANIGKPQVAYRETIR AVESEGKFVRQ+GGRGQYGHVWLK+EP+ G E YEFVDEIVGGVVPREYISAVD+GIQDQ+ NGVLAGYPL G+KATL+DGSYHDVDSSEVAFKVAGSMAL+ G LD DP+LLEP+  VEVV PEDYYGD+IGDLNRRRGIV+GMEDVPAGK+V+A VP++EMFGYATD+RS +QGRATFSMEF  Y EVPD +A+AVISRT
Sbjct:  405 ERMEFPDPVIRVAVEPRSQADQEKMSIALGKLAAEDPSFQVSTDEESGQTLIAGMGELXLDIIVDRMKREFSVDANIGKPQVAYRETIRQAVESEGKFVRQSGGRGQYGHVWLKLEPMTGDEDYEFVDEIVGGVVPREYISAVDRGIQDQMANGVLAGYPLLGIKATLYDGSYHDVDSSEVAFKVAGSMALRQGVLDGDPILLEPVFAVEVVCPEDYYGDVIGDLNRRRGIVMGMEDVPAGKAVKAEVPLAEMFGYATDVRSMSQGRATFSMEFTSYKEVPDTVADAVISRT 696          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1560.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8J725_9GAMM1.640e-17988.36Elongation factor G n=2 Tax=Gammaproteobacteria ba... [more]
A0A7C7S7J8_9GAMM3.190e-17986.64Elongation factor G n=1 Tax=Gammaproteobacteria ba... [more]
A0A2E3WFU7_9GAMM5.340e-17887.33Elongation factor G n=4 Tax=Gammaproteobacteria Ta... [more]
A0A2D8QSE7_9GAMM2.090e-17788.36Elongation factor G n=2 Tax=Gammaproteobacteria ba... [more]
A0A3C0L654_9GAMM3.490e-17687.24Elongation factor G n=4 Tax=Gammaproteobacteria ba... [more]
A0A2D7FWH4_9GAMM1.610e-17486.25Elongation factor G n=2 Tax=unclassified Gammaprot... [more]
A0A2E8VPB5_9GAMM8.370e-17485.86Elongation factor G n=1 Tax=Gammaproteobacteria ba... [more]
A0A2D9SPD9_9GAMM2.410e-17184.19Elongation factor G n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A2E3D7L0_9GAMM3.560e-17083.79Elongation factor G n=1 Tax=Gammaproteobacteria ba... [more]
A0A1Z8RL74_9GAMM1.520e-16983.56Elongation factor G n=2 Tax=Gammaproteobacteria Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1560contigP-littoralis_Contig1560:3..881 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog243233.MCA2375
PFAMsEFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
Model size879
Max annot lvl135618|Methylococcales
KEGG koko:K02355
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.31e-156
EggNOG OGsCOG0480@1|root,COG0480@2|Bacteria,1MUCV@1224|Proteobacteria,1RNSZ@1236|Gammaproteobacteria,1XDNZ@135618|Methylococcales
DescriptionCatalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Cds size873
COG categoryJ
BRITEko00000,ko03012,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789747.15121-UTR-P-littoralis_Contig1560:2..81680789747.15121-UTR-P-littoralis_Contig1560:2..8Pylaiella littoralis U1_48UTRP-littoralis_Contig1560 3..8 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789747.1638594-CDS-P-littoralis_Contig1560:8..8811680789747.1638594-CDS-P-littoralis_Contig1560:8..881Pylaiella littoralis U1_48CDSP-littoralis_Contig1560 9..881 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1560.1.1prot_P-littoralis_Contig1560.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1560 9..881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1560.1.1

>prot_P-littoralis_Contig1560.1.1 ID=prot_P-littoralis_Contig1560.1.1|Name=mRNA_P-littoralis_Contig1560.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=291bp
MEFPEPVIHVAVEPRSQADQEKMAVALGKLAAEDPSFRVRTDEESGQTII
GGMGELHLDIIVDRMKREFSVEANIGKPQVAYRETIRNAVESEGKFVRQT
GGRGQYGHVWLKIEPIEGEGYEFVDEIVGGVVPREYISAVDKGIQDQLNN
GVLAGYPLQGVKATLFDGSYHDVDSSEVAFKVAGSMALKSGALDADPVLL
EPIMKVEVVTPEDYYGDIIGDLNRRRGIVLGMEDVPAGKSVRANVPMSEM
FGYATDMRSATQGRATFSMEFEKYSEVPDAIAEAVISRTG*
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mRNA from alignment at P-littoralis_Contig1560:3..881+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1560.1.1 ID=mRNA_P-littoralis_Contig1560.1.1|Name=mRNA_P-littoralis_Contig1560.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig1560:3..881+ (Pylaiella littoralis U1_48)
GAGCGGATGGAATTTCCTGAGCCGGTTATTCACGTGGCTGTTGAACCTCG TTCGCAGGCAGATCAGGAAAAGATGGCGGTGGCGCTAGGAAAACTGGCGG CCGAGGATCCATCCTTCCGGGTGAGAACCGACGAGGAATCAGGACAAACC ATCATCGGCGGTATGGGTGAGCTTCATCTGGATATCATCGTTGATCGTAT GAAGCGTGAATTCAGTGTTGAAGCCAATATTGGTAAGCCCCAGGTGGCCT ACCGTGAAACGATTCGCAATGCCGTAGAGTCCGAAGGCAAGTTTGTCAGG CAGACCGGCGGTCGGGGCCAGTATGGTCACGTCTGGCTGAAGATTGAGCC AATTGAAGGCGAAGGCTACGAGTTTGTGGACGAAATTGTTGGTGGTGTTG TACCTCGTGAATACATCAGTGCTGTGGACAAAGGCATCCAGGATCAGTTG AACAACGGTGTACTGGCTGGCTACCCACTCCAGGGTGTGAAAGCGACACT GTTTGATGGCAGCTATCACGATGTGGACTCCAGCGAAGTGGCGTTCAAGG TTGCTGGATCGATGGCGCTGAAGTCTGGTGCGCTGGATGCAGACCCGGTT CTATTGGAACCGATCATGAAGGTTGAAGTGGTAACGCCGGAAGATTACTA CGGTGACATCATTGGCGATCTGAACCGTCGCCGTGGCATTGTGCTGGGTA TGGAAGATGTACCTGCGGGCAAGTCTGTAAGAGCCAACGTGCCAATGTCT GAAATGTTCGGGTATGCCACGGACATGCGTTCCGCGACTCAAGGTCGTGC CACATTCTCCATGGAATTTGAAAAATATTCAGAGGTTCCTGACGCAATCG CTGAAGCGGTGATCAGCAGAACCGGCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1560:3..881+

>mRNA_P-littoralis_Contig1560.1.1 ID=mRNA_P-littoralis_Contig1560.1.1|Name=mRNA_P-littoralis_Contig1560.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=873bp|location=Sequence derived from alignment at P-littoralis_Contig1560:3..881+ (Pylaiella littoralis U1_48)
ATGGAATTTCCTGAGCCGGTTATTCACGTGGCTGTTGAACCTCGTTCGCA
GGCAGATCAGGAAAAGATGGCGGTGGCGCTAGGAAAACTGGCGGCCGAGG
ATCCATCCTTCCGGGTGAGAACCGACGAGGAATCAGGACAAACCATCATC
GGCGGTATGGGTGAGCTTCATCTGGATATCATCGTTGATCGTATGAAGCG
TGAATTCAGTGTTGAAGCCAATATTGGTAAGCCCCAGGTGGCCTACCGTG
AAACGATTCGCAATGCCGTAGAGTCCGAAGGCAAGTTTGTCAGGCAGACC
GGCGGTCGGGGCCAGTATGGTCACGTCTGGCTGAAGATTGAGCCAATTGA
AGGCGAAGGCTACGAGTTTGTGGACGAAATTGTTGGTGGTGTTGTACCTC
GTGAATACATCAGTGCTGTGGACAAAGGCATCCAGGATCAGTTGAACAAC
GGTGTACTGGCTGGCTACCCACTCCAGGGTGTGAAAGCGACACTGTTTGA
TGGCAGCTATCACGATGTGGACTCCAGCGAAGTGGCGTTCAAGGTTGCTG
GATCGATGGCGCTGAAGTCTGGTGCGCTGGATGCAGACCCGGTTCTATTG
GAACCGATCATGAAGGTTGAAGTGGTAACGCCGGAAGATTACTACGGTGA
CATCATTGGCGATCTGAACCGTCGCCGTGGCATTGTGCTGGGTATGGAAG
ATGTACCTGCGGGCAAGTCTGTAAGAGCCAACGTGCCAATGTCTGAAATG
TTCGGGTATGCCACGGACATGCGTTCCGCGACTCAAGGTCGTGCCACATT
CTCCATGGAATTTGAAAAATATTCAGAGGTTCCTGACGCAATCGCTGAAG
CGGTGATCAGCAGAACCGGCTAG
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