mRNA_P-littoralis_Contig156.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig156.5.1
Unique NamemRNA_P-littoralis_Contig156.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: D7FZ22_ECTSI (Putative zinc-protease albF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ22_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 7.860e-96
Identity = 163/309 (52.75%), Postives = 195/309 (63.11%), Query Frame = 3 
Query:    6 EMEGQLYRHKSGSKRRRVGSARSGLRCLVIPCLAFAGVCGVSTSLR--WQLFREASEVPSVRGAAAQEAPDVPEVVGFAEGGQNDPAAPVVAFAISITSLELPRALPMLDSAEVLLHSIQAACKLSRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPGTAKELNR 926
            E+ G   R+  G KRRR G  RSG+ C++ PCL F  VC  S  LR  WQ              A ++ P VPE           P+APVVAFAIS+TSLELP A  MLDSAEVL+ SI+AACKLSRYRCE +AF LPSV  EG +HLE MGWRVVEKD+PVA+E+IE+E+YR  VVK+GCCG  EFIKLHAYTLT YHRV+H+D DTL+LHPMDELM      ++                                     R+GDWK+G GW  S+IGYFYGGATIQGLL YYY+++APG A E++R
Sbjct:    3 EVRGHPIRNYDGGKRRRGGGVRSGIGCVIYPCLTFVVVCSFSVLLRRQWQF-------------APRDTPPVPEETA-------SPSAPVVAFAISVTSLELPTASTMLDSAEVLIQSIRAACKLSRYRCEALAFTLPSVSQEGRQHLEGMGWRVVEKDLPVAVEDIENETYRKHVVKSGCCGANEFIKLHAYTLTQYHRVMHVDADTLMLHPMDELMARPRDYVHVV---------------------------------WFRQGDWKVGPGWRRSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDR 258
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: D8LCJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ8_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 3.810e-68
Identity = 140/376 (37.23%), Postives = 194/376 (51.60%), Query Frame = 3 
Query:  219 EVVGFAEGGQNDPAAPVVAFAISITSLELPRALPMLDSAEVLLHSIQAACKLSRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPGTA--KELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRKDQNEGSCALLQQAWSETRSIIMSKMGLPVTETCAKG---RYTPI 1331
            +++G   GG+       VAFAIS+T     R    LD A VL  SI AAC+ S + C+ VAF    +G      L  +G+RV+   +P++L+EIED   R R+ K GCCG  E +KL AYTLT+YHRVVHLDTDT++L P+D L+++ ESLLYT D  M +  +  +PVQGGFL+VRPD  V+ +L  I+++  +    GWGGS IG F+GG  +QG+LPYYY   AP     + ++R +YN+M D   C+  D                                                       +S ++S HFT +C KPW C       +  C+ L + W E R++  S + LP  E C  G    YTPI
Sbjct:   51 QLLGGVCGGRK-----AVAFAISLT-----REGNHLDGAAVLAASIDAACETSEFLCDLVAFLHDEIGLGTENLLRRLGFRVMRPGLPLSLDEIEDPVTRGRIAKGGCCGLAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALLDAEESLLYTADINMGSSYTPVMPVQGGFLVVRPDPEVFQDLVQIVKRTSFYPSKGWGGSMIGLFWGGVNVQGILPYYYERRAPAGVLYRSVDRSVYNNMVDRPSCQAVD-------------------------------------------------------ISQVRSAHFT-NCQKPWEC-LYPHPKQPLCSRLAERWFEMRTLAESALELPHKEACPTGFRSEYTPI 359
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: A0A835Z761_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z761_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.120e-62
Identity = 141/390 (36.15%), Postives = 190/390 (48.72%), Query Frame = 3 
Query:  234 AEGGQNDPA-------APVVAFAISITSLELPRA-LPMLDSAEVLLHSIQAACKLSRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYH--------------VVAPGT-------------------AKELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRKDQNEGSCALLQQAWSETRSIIMSK 1280
            AE  Q  P+       AP VA+A++IT ++   A   +LD+ EVL  SI + C+ S+Y C  VAF  PSV  E    L  +GWRV+E+ VP+ + +IE E  RNR+ K+GCCG  E IKL A++LT+Y+RV+HLD D L+L P+DEL+     L+YTTD  MA   +  +PVQGGFLL RP    +DEL  I++KGDW    GW  S IG+F+GG TIQGLL YYY               +++P                     + E +RC +NHM D+ ECR    YA+                                                      + SVHFTQSC KPW C  R+   +  C  L   W   R+   ++
Sbjct:   61 AEQNQQQPSPEPEEVLAPTVAYAVTITRIDEGDAGQTLLDAIEVLGLSIDSVCRRSKYDCAKVAFVDPSVRAERRGPLSALGWRVLERGVPLDIAQIEGEKLRNRIDKSGCCGASELIKLWAFSLTEYYRVLHLDVDALMLQPVDELIARDVELVYTTDVKMAPN-AHNMPVQGGFLLCRPSQATFDELVGIVKKGDWAPNVGWARSGIGFFHGGPTIQGLLAYYYRHDRTLPNRALPPPLLLSPPXXPLQXXXXXXXRFLKPTELSYEADRCAFNHMWDTPECRS---YAI----------------------------------------------------GDVHSVHFTQSCPKPWVCTARR---QAGCDALSARWYALRAAARAR 391
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: A0A7S0SWJ4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWJ4_9STRA)

HSP 1 Score: 207 bits (526), Expect = 4.740e-59
Identity = 123/333 (36.94%), Postives = 181/333 (54.35%), Query Frame = 3 
Query:  270 VAFAISITSLELPRALPMLDSAEVLLHSIQAACKLSRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPGTAKELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRKD-QNEGSCALLQQAWSETRS 1265
            +A+AI++T          +D A VL +SI  + K+S+Y  E +AF + +V       L+  GW+V+EK +PV L+EIE++ Y +R+  +GCCG  EF+KL A+TLT+YHRVVHLD D+++L  MDEL +  + +LYT D  M    S   P QGGFL+VRP L  + + + IIRKGD    +GWG ++IG F+GG TIQG++PYYY+ +    + ELNRC+YN M D+   + T  +  L +  + +                                     D     +  +KS HFT  C KPW C    + +N+  C  L + W E R+
Sbjct:    4 IAYAITVTKDG-----SFVDGALVLGYSIIKSHKISKYDAELIAFVVSNV-QTSRPILQAYGWKVIEKKLPVELDEIENKKYADRMKDSGCCGADEFLKLWAFTLTEYHRVVHLDMDSVVLQNMDELYDIDKEMLYTGDYGMKGD-SPVPPAQGGFLVVRPSLTTFSKFQEIIRKGDHSSSSGWGNTHIGNFWGGTTIQGIIPYYYYSIDQNNSYELNRCVYNCMVDNPYHKNT--FNCLNNQPKCE-------------------------------------DCRLQRIENVKSAHFT-ICQKPWTCTEHTNIKNKDLCEKLHKKWFELRN 289
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: A0A6H5JYN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN4_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.220e-57
Identity = 115/256 (44.92%), Postives = 159/256 (62.11%), Query Frame = 3 
Query:  219 EVVGFAEGGQNDPAAPVVAFAISITSLELPRALPMLDSAEVLLHSIQAACKLSRYRCETVAFALPSV--GPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPG--TAKELNRCIYNHMSDSDECRRTD 974
            +++G   GG+       VAFAIS+T     R    LD A VL  SI AAC+ S + C+ VAF    +  G E L  L  +G+RV+   +P+ L+EIED   R R+ K GCCG  E +KL AYTLT+YHRVVHLDTDT++L P+D L+++ ESLLYT D  M    +  +PVQGGFL+VRPD  V+ +L  ++++  +    GW GS IG F+GG  +QG+LPYYY   AP   + + ++R +YN+M D   C+  D
Sbjct:  109 QLLGGVCGGRK-----AVAFAISLT-----REGNHLDGAAVLAASIDAACETSEFLCDLVAFLHDEIELGTENL--LRRLGFRVMRPGLPLNLDEIEDPVTRARIAKGGCCGPAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALLDAEESLLYTPDVNMGNSYTPVMPVQGGFLVVRPDPEVFQDLVQVVKRTPFYPSKGWAGSMIGLFWGGVNVQGILPYYYERRAPAGVSYRSVDRSVYNNMVDRPSCQAVD 352
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: A0A836C6W8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W8_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.370e-55
Identity = 135/374 (36.10%), Postives = 180/374 (48.13%), Query Frame = 3 
Query:  237 EGGQNDPAAPVVAFAISITSL-ELPRALPMLDSAEVLLHSIQAACKLSRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIE-DESYRNRVVKTGCCGEKEFIKLHAYTLTDYH------RVVHLDTDTLILHPMDELMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPGTAKELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHC-GRRKDQNEGSCALLQQAWSETRSIIMSKMGLPVTETCAKGRYTPI 1331
            +GGQ      VVAFAI++TSL +       +D+ EVL  SI  +C  S Y+C+ VA   P V  +    L   GWRV+E+ +P+ L+ I+ D   R +    GCCG KE IKL A+TLT+YH      RV+H+D D ++L P+DE +     L+YT D  MA+ +   +PVQGGFLL+RP L ++  L  I+RKGD+  G GW  S IG+F+GG TIQGLL YYY  V P  A   + C+ N+M   D+CR                                     TR P+                     S HFT  C KPW C G   D     C    + W E R   ++ + L   E C  G Y P 
Sbjct:   19 DGGQATAKRKVVAFAITLTSLSDDEEGAAYIDAIEVLRKSIDLSCAHSDYQCKFVALLDPEVPVQRRSLLTAHGWRVLERGLPLDLDTIKTDLRERLKTTTAGCCGAKELIKLWAFTLTEYHSADSNNRVIHVDIDAMVLQPLDEWIAKDVDLVYTEDAPMASNKHN-MPVQGGFLLLRPSLEIFQTLVEIVRKGDF-TGDGWNKSGIGWFWGGDTIQGLLAYYYRAVKPERAFIADPCVVNNML-IDDCR-------------------------------------TRDPLE------------------TYSYHFTL-CQKPWKCLGEPPDY----CQYAWKKWFEIRDAAIAGLQLEPMEACVDGHYRPF 329
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: A0A7S1UJ30_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ30_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.430e-54
Identity = 127/371 (34.23%), Postives = 174/371 (46.90%), Query Frame = 3 
Query:  270 VAFAISITSLELPRALPMLDSAEVLLHSIQAACKLS----------RYRCETVAFALPSVGPEGLRH-LENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAESLLYTTDPAMATRRSKEL---------PVQGGFLLVRPDLRVYDELRAIIRKGDW----------KIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPGTAKELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRKDQNEGSCALLQQAWSETRSIIMSKMGLP 1292
            VAFAI +T        P +D A V+   +   C+            +Y  + +AF L     E +   L+  GW  + K +PV  EEIED +YR  V K GCCG  E++KL+AY   +YH+VV LD D+L+L  +D+L E+  SL +T D  M +R  K           P QGGFLLV P ++ YD L AIIR+GD+          K G  W G+ IGY++GG T+QGLLPYYY V APG + E++ C YN+M D++EC+                                 G P                      V  +++ HFT  C KPW C R   +N+  C  L   W E R  +  + G P
Sbjct:   24 VAFAIVVTKDG-----PYVDGAAVIREGVLRGCRAKYGDPELRGSPKYDYDFIAFLLDDAVTEAMEESLKRFGWTTLRKPLPVPYEEIEDATYREMVDKAGCCGAAEYLKLYAYAQLEYHKVVLLDMDSLVLGCLDDLFEADASLQFTYDMGMCSRCQKNATLEHGGKVPPYQGGFLLVSPSMKHYDALTAIIREGDFREGGAKNAPGKKGIAWKGTRIGYYWGGRTVQGLLPYYYTVEAPGESLEVDMCAYNNMVDNEECQ---------------------------------GVP----------------------VDYVQNAHFTV-CQKPWKCKRWYRENQALCEQLHDKWYELRLEVGKEFGEP 333
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: W7U427_9STRA (Glycosyl transferase, family 8 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U427_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.100e-54
Identity = 110/321 (34.27%), Postives = 163/321 (50.78%), Query Frame = 3 
Query:  375 SRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAE-SLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVA-PGTAKELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRKDQNEGSCALLQQAWSETRSIIMSKMGLPVTETCAKGRYTPI 1331
            S+Y  + +A   P+V       L   GW+V+E+D+PV + +I+    R  + K+GCCG  E +KL+A+TLTDYHRVVHLD D+++L PMDEL +  + + +YT D  M   R K   VQGGFLL+RP++  ++ L   ++ GD++ G+GWGG  IG+ YGG TIQGLLPYY+  ++ P  + +L+ C YN M D  +C+     ++ PS                                                   +KSVHFT  C KPW C    + ++ +C   +  W E R  +         E C  G+Y P+
Sbjct:    3 SKYGVDFIAIVHPNVTTSRAA-LRRSGWKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDELFDKEDKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVKIGDFRQGSGWGGKGIGWGYGGMTIQGLLPYYFLSLSDPELSLQLDHCKYNTMFDQPQCKNA---SLFPS---------------------------------------------------VKSVHFTV-CQKPWSC---INTHKEACEYFKSKWFELRDELEVLETGAHAEACKGGQYHPL 264
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: R1CNT5_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CNT5_EMIHU)

HSP 1 Score: 193 bits (490), Expect = 1.340e-53
Identity = 129/344 (37.50%), Postives = 175/344 (50.87%), Query Frame = 3 
Query:  318 PMLDSAEVLLHSIQAA----------------------CKLSRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDE---LMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPG---TAKELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRKDQNEGSCALLQQAWSETRS 1265
            P +D A VL HSI+ A                       +   Y    VA   P+V       L  +G+RV+E+  PVA+ EI     R R+V++GCCG  E +KL A++L +Y RV+ LDTD+++L P+     L  +   L YT D  M  R  +  P+QGGFLLVRP   V  EL  I+R+GD++ G+GWGGSNIG+F+GG T+QGLLPYYY V A     +  EL+RC++N+M+D+    R   YAV      A AS    D  R   +G                     PD  AS + AI+S HFT  C KPW+C  R ++    C  L   W   R+
Sbjct:   25 PYIDGAAVLGHSIRTAHSHFAKDGEPSPARAEAGEEGTLQPPTYVSSLVALTHPTVSNATRAALALVGFRVLERPTPVAIPEIRGSFLRQRIVRSGCCGATELMKLWAWSLVEYDRVLLLDTDSIVLRPIPLGILLRMAPGDLAYTYDYGMGKRGLRTPPIQGGFLLVRPSPSVLAELLEIVREGDFRPGSGWGGSNIGHFWGGVTVQGLLPYYYTVRADRRRVSGMELDRCVFNNMADNP---RGAEYAVALVPLNASASGAARD-MRWQYVG---------------------PDCRASTLDAIRSAHFT-ICSKPWNC--RPNRKHALCLALHARWHSLRA 340
[Close]
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Match: A0A7S3NFL9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFL9_9STRA)

HSP 1 Score: 192 bits (487), Expect = 5.440e-52
Identity = 125/361 (34.63%), Postives = 183/361 (50.69%), Query Frame = 3 
Query:  267 VVAFAISITSLELPRALPMLDSAEVLLHSIQAACK--LSRYRCETVAFALPSVGPEGLRHLENMGWRVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVHLDTDTLILHPMDELMESAE------SLLYTTDPAMATRR-SKELPVQGGFLLVRPDLRVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPGTAKELNRCIYNHMS---------DSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGALGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRKDQNEGSCAL---LQQAWSETRSIIMSKMG 1286
            +VA+AIS+T          +D A VL HS     +  +S+Y    +AF  P++  +    LE  G+RV+E+D+P+ + +I+ E  RNR+ K GCCG  E +KL+A+TLT+YHRVVH+D D LIL P+DEL +  +        +YT D  MA        P QGGF++ +PD+ V++ L  ++RKGD++ G GWGG+ +G ++GG TIQGL+PY++  + PG+   ++ CIYN+M+         D  ECR          GT+    P      RL +                              V  IK+ HFT  C KPW C R    N   C L   L   W + R  +  + G
Sbjct:   70 IVAYAISVTKDGA-----YVDGAAVLAHSAIRVHRYGVSKYGVALIAFVSPAISKKTRTALEACGYRVLERDLPLRIADIQGEYLRNRIEKNGCCGAWELLKLYAWTLTEYHRVVHVDMDVLILQPLDELYDDLKIWGPQVRAVYTYDWTMARPPWGTNPPTQGGFIIAKPDIEVFNSLVDVVRKGDFQGGKGWGGTGVGAYWGGMTIQGLVPYFFEKLRPGSGFAVDECIYNNMATNPRSVGGFDKGECR---------DGTK---PPRKCKDCRLVD------------------------------VETIKTTHFT-ICQKPWEC-RGLSNNCPYCPLCTKLHAKWYDIRKEMEIEWG 381
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ22_ECTSI7.860e-9652.75Putative zinc-protease albF n=1 Tax=Ectocarpus sil... [more]
D8LCJ8_ECTSI3.810e-6837.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z761_9STRA1.120e-6236.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0SWJ4_9STRA4.740e-5936.94Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A6H5JYN4_9PHAE1.220e-5744.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C6W8_9STRA2.370e-5536.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UJ30_9STRA1.430e-5434.23Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
W7U427_9STRA3.100e-5434.27Glycosyl transferase, family 8 (Fragment) n=3 Tax=... [more]
R1CNT5_EMIHU1.340e-5337.50Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S3NFL9_9STRA5.440e-5234.63Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig156contigP-littoralis_Contig156:9648..23229 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZ22
Model size1477
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue1.73e-96
EggNOG OGs2B6VE@1|root,2S0N3@2759|Eukaryota
Cds size1335
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig156.5.1prot_P-littoralis_Contig156.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig156 9656..23095 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789743.7882512-UTR-P-littoralis_Contig156:9647..96551680789743.7882512-UTR-P-littoralis_Contig156:9647..9655Pylaiella littoralis U1_48UTRP-littoralis_Contig156 9648..9655 +
1680789743.8867538-UTR-P-littoralis_Contig156:23095..232291680789743.8867538-UTR-P-littoralis_Contig156:23095..23229Pylaiella littoralis U1_48UTRP-littoralis_Contig156 23096..23229 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789743.797679-CDS-P-littoralis_Contig156:9655..98131680789743.797679-CDS-P-littoralis_Contig156:9655..9813Pylaiella littoralis U1_48CDSP-littoralis_Contig156 9656..9813 +
1680789743.806212-CDS-P-littoralis_Contig156:18181..183341680789743.806212-CDS-P-littoralis_Contig156:18181..18334Pylaiella littoralis U1_48CDSP-littoralis_Contig156 18182..18334 +
1680789743.814646-CDS-P-littoralis_Contig156:18905..190461680789743.814646-CDS-P-littoralis_Contig156:18905..19046Pylaiella littoralis U1_48CDSP-littoralis_Contig156 18906..19046 +
1680789743.823105-CDS-P-littoralis_Contig156:19722..198001680789743.823105-CDS-P-littoralis_Contig156:19722..19800Pylaiella littoralis U1_48CDSP-littoralis_Contig156 19723..19800 +
1680789743.8350444-CDS-P-littoralis_Contig156:20202..203181680789743.8350444-CDS-P-littoralis_Contig156:20202..20318Pylaiella littoralis U1_48CDSP-littoralis_Contig156 20203..20318 +
1680789743.8463929-CDS-P-littoralis_Contig156:20622..207621680789743.8463929-CDS-P-littoralis_Contig156:20622..20762Pylaiella littoralis U1_48CDSP-littoralis_Contig156 20623..20762 +
1680789743.8551257-CDS-P-littoralis_Contig156:21877..220081680789743.8551257-CDS-P-littoralis_Contig156:21877..22008Pylaiella littoralis U1_48CDSP-littoralis_Contig156 21878..22008 +
1680789743.8649573-CDS-P-littoralis_Contig156:22199..224821680789743.8649573-CDS-P-littoralis_Contig156:22199..22482Pylaiella littoralis U1_48CDSP-littoralis_Contig156 22200..22482 +
1680789743.875313-CDS-P-littoralis_Contig156:22960..230951680789743.875313-CDS-P-littoralis_Contig156:22960..23095Pylaiella littoralis U1_48CDSP-littoralis_Contig156 22961..23095 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig156.5.1

>prot_P-littoralis_Contig156.5.1 ID=prot_P-littoralis_Contig156.5.1|Name=mRNA_P-littoralis_Contig156.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=445bp
MEGQLYRHKSGSKRRRVGSARSGLRCLVIPCLAFAGVCGVSTSLRWQLFR
EASEVPSVRGAAAQEAPDVPEVVGFAEGGQNDPAAPVVAFAISITSLELP
RALPMLDSAEVLLHSIQAACKLSRYRCETVAFALPSVGPEGLRHLENMGW
RVVEKDVPVALEEIEDESYRNRVVKTGCCGEKEFIKLHAYTLTDYHRVVH
LDTDTLILHPMDELMESAESLLYTTDPAMATRRSKELPVQGGFLLVRPDL
RVYDELRAIIRKGDWKIGTGWGGSNIGYFYGGATIQGLLPYYYHVVAPGT
AKELNRCIYNHMSDSDECRRTDRYAVLPSGTEADASPTLADAQRLAELGA
LGGSPGTRTPVSGTGLAATMPDAAASGVSAIKSVHFTQSCMKPWHCGRRK
DQNEGSCALLQQAWSETRSIIMSKMGLPVTETCAKGRYTPIPRS*
back to top

mRNA from alignment at P-littoralis_Contig156:9648..23229+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig156.5.1 ID=mRNA_P-littoralis_Contig156.5.1|Name=mRNA_P-littoralis_Contig156.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13582bp|location=Sequence derived from alignment at P-littoralis_Contig156:9648..23229+ (Pylaiella littoralis U1_48)
TGGCAGAGATGGAAGGCCAGCTGTATAGACATAAGAGCGGAAGTAAGAGA
AGACGGGTGGGCAGCGCTCGATCGGGGTTGCGGTGTCTCGTGATTCCATG
CCTGGCCTTCGCTGGGGTCTGCGGCGTGAGCACCTCTCTGAGATGGCAGT
TGTTCCGCGAGGCAAGGTAAGAGAGAGGGACGAGGCAGGTGCACTAGCGA
TGAGGGAGGCAAAGGGAAGATGGAAGCGGCCTCAGACACAATTAGCCAGT
TACGTAGTACATGGCAGGTGTTGCAGCTTTGAGGAACAATGTCAGCCTTC
AGGAACAACAACAAAATAATGTCACATGGAAAAAATGTATACAACCCGCG
GGGTTGTTCCGCGTCCAGTCAGAACTCCGAAGACAAAGTTCAAAGTTCGG
TCATTTACTGACTCTGTTTAACCTCCCTGACACCTCGCGCTGATCCCTTA
AGGCCCTGTGTTCACGACAATCATGAAATCAAATTTGAAAAATCAAAATA
GCACAATCAAAGTTTGATTTTACAAAAAACACTGCGAGCCATATTAACGG
ACCAGCTTAGTAGAGGCCTGTAAACGCCGCCTAGATCCAAAACCTCTGAT
TGATTATGATGTCAGGGCGTATCTTGGAAAGAAAAAAACGAGGTGCGGAA
CGTGGAACGTAGAACCTAGAATAAGGCGGTTTTTGTAGGGCCGGATTTTT
TATTCATTTGTTGATAGATTCCGATTTTTTTTGAAATCAGGCTTCTAATA
GGTTCGGAAAACACCTTTTTCCGAACAAAATTCTCCGAGCAAAATTTTCC
GAACAGCTTTAAATCGGATTGCCGCCGGAAAATCGGACATTTTCCGAACG
CTGGATCAGTTCGGAAAATACGATCGGAAAATATATTAAAAAAAATATAT
GTGAAGTTATCTCTCTCTTCGTGTGTAGACAAAACAAACGATATTAATCA
CAACAGAGCATCAGAGGGGGAGAGCTGCTGCTACTACTTTCCGTGTTGTT
GCAGCTTCTGCTCCTGCTGCTGCTGCTACTACTGCTTGCTGCTGTCCATA
CATGTGTCCACCATCTTTCTGTGTACGCTTGCCGTGTCATCATCCATTCC
ATCGTGTTCATCAGCAACCAAAACCAACCGTAAGTAGCAGCAGCATCATC
AGCACAGCAGCAACAAGCAGGAGGAGGAGGAGTATCAAAGCTTCCTCTGA
GTGAGACCAGTTTGCATCTTCTTCGCGCGTAACTCCCCAATGAATAAAGC
CACAGCGATGACAAACCCATCTCCCGTGAGCTGTGCGTATGGCTCCCCTC
GTGTGGTAATCGTTTGGGTGAGGATCACACTGGCATGTTCGCAAAATGGT
CATCGCTCGTGGCTGTGGCATGTTGTTGTGTTGTAAAAAAGAACCCGAGC
TGTCATCTCATTTCTCTACTGCTGTACAACTACTATACATACAGCAGTAT
ATAATAATGCTGTTGTACAGCAGACCGGCTGATACATTTTTCTCAATTTG
TTTCGCATGAGTTGGCCATGAGCAAACCTACGTTGCGAATGTACGGATGT
AACCCTAACACAAGCGATCACGACACGAGGGGGATCATAGACACAGCTCA
CGGAAGATGCCTCCATCATTGCTGTGTCTTCATTCGTTCGAAAGTTAATA
GCGGCGATGCAAACGGGTTTCAGCGCAAAAAACACCACCATGCGGTCCTT
CGATGGAGATATATACTCTGGAGCCGACTCTTCAAGCACCTACTAAAAAA
AGGATCACCGAAAATCCGAACACCTGTTTACCTATAAGAACGGCGGATCG
GCAACCGCTGGCCGGAAAAAGTTCGTTCGGATTCTATCAAAAAATGAAAA
AGAAATCCGGCCCTACAAGAAACCTCCTAATTCTCTGATTGGCCAACCTC
AGCAAAAAACATTCCTGGAAAGAATTTCGGCCACCGGGGTTCCACATTTC
TCGTTCCCTCCTCCAAAATAATTGGAAGGCCTCCGTTCCTTAAAATTGTC
CAAAAGCCTGTGTGGAACGGGCTACAGTACTGGGGGGCAAGAAGTTTCCG
GTAGCTTTCTCCGTCTATCTGACCACAAAACCCATACCACACACACAAGG
TAAACACACACATAGACACATGCACAGCTAGCTCCCCCCACAATCATGCC
ACCCCGCCTAGCGCCACACGTAAAACTAACCGTAATATGTAAGCCCTCTC
ACTCGGATGAACAAAGTCACCTTGCTGCAGCAGCAAGAAGAGCAGCAGAG
AAATGATCACACCTCATCTCACACCTCTCCGTCTGTTTGTTCCTCCGCTT
TTTGGCCAAACGGACGCGCGGACGACTGCGGCCGGCCGACATGTAACCAT
CTCTCACACCATTGTGTGCTATGCTGTGTGTGCTGTTTATATGTGTATGT
CTGTGTAAGGTCTGTGGGCGAGAGATGGGAGATGGACGGGTTCGTGCGTG
CGTGTGTGTGTGGTGTTGAACAACTCTCAACGCCCATGGTACTCCTGCTT
CGTACTGCTACTTTACTTCTGTACTTGCACCACAGCAGCGACCCTCAGGC
TTTTCGCTTGCAAACGGTTCCACGTTCTTCATTTCGAAATAGTTTTTTTT
ATTCCAAGACACAAAGCGTGGAATAGGGAACGAGGAATCTAGGTTTCACG
TTCCCCGCTCCACACCTCGTTTTTTTTTGCAAGACACGCCCTCACCATCG
ATCGGCACTGCTGTAAACATAACAACAACAGCAGCAGCAGTACAGATACA
TTGTACATGTATCAGAGCAGCACTGCACGCTGATGCTACGTCGCTGAGAG
ACACCGCGTTGTTTGTGTGTCTGTCGGTTTGTTTGTGTATGTTGGCTCAT
CATGGACTCGAGACTGCTCTGCGCGTCTGGCTGTCTGCTGTGTGTTGTTG
TTTGGCTGTCGTTGTCCTGCTCTAGGTGTTGTCTGGTGCCTCATCATGCG
AGTCTGCCTATCTTTGTTCTGCTCTAGGTGTGGTGCTGGTTTTGACATGC
CTGGTGCGACGGCACACCTCTCTCTCTTTGTGTTCTGTAGGTTGCGTCGG
CGTGCCCTGTGCCTCTGTCTGCTTGTCTGTGGTGTGGTGCGCGAGTCACA
TCGTTCAGAAAGCCTTCGATCGGGTTAAGACCCCCAATTTTGATTTTGAT
TTTCTGGCAATTAAGTCTCTTTGGACTTCTTTGGTCTGCCGGTGATGTCC
AAGAAATCAAAATTGTCGTCGGTAGGTCTTGAGAGCCTCGACCAATAAAG
ACCAATTTTGATTTTGATTCTTTCCAATTTTGATTTCCTGATTGTGGTTA
ATACAGGGCCTTACCACTCGGCGGCATGTGTATTTCACCAACCCATCTCT
ATTCCTGGAGATTTCTGAGCCATTTGGGTGACTCTACGAAGGTGCCACAT
GGTGTGAACGCGTGAGCTCCAATTTATTTTTCGCATGTCTTTACTGCGAA
GTGTATCATACTGCTGCCATACACTCTCTGTACGATAGTTGTGAGGTGAG
GTCGCCTCATCATCTTTCTTGGACTGCCCACTTGCGCCGCTGGCGACTAC
AGCAGTGGACGTTTCTACTCGGTTCGGCTACGCATAGGCGACCTTTGTAA
GCCGGCATTTACCGCCTCTATGCCGATCCCAAATTACGTTACTCTCCTCG
GCGTTCTTTGATTATGACTGTGTGATTTTGTTGTAGTCGTGTATCGGCCG
ATGTTGGAGATCCCATCGAGGTGCAACATCGGCGTGAAAGATGCCTGCCT
CCCGAGAGCTGCAAGGGGTCGCATGGAACAGCAGCAAACGGTTTGAATTT
AGATGTGCTGACGGAGCCCGATCAAAGCAAAATCGACTGCCCTGTGCCTA
CCAACCTGCCCCGCTCCGGCAACGCACACACGCGTACACGCACACACGCA
AACCACGCGTACATCACACATCACAAAACAGACGACAGCACGAAGCATCC
CCTCGTCGATGTTTGTACGTTCTTCGAAGTATATGCCAACACACACGGAT
GCACACACATATCTTGCCAAACAGCAACACAGACATATATACACGAGCAC
GTGTTTGTGATAAGCTCTGAAACTCGGAGAGCGGGTTCGTGATCGACAGA
CAACTGTTATTGTTTCAAGATCCTGCCCGGGGCAGGGAGAGTCGACAGAG
AATGCGAACACAGACAGCCTTGTTACAGGGTGGGGACTACGGGATAAAGG
CTTCAGCGCTTTAGCGAGGGGTGTGCCATGCCAAGAAAAACTCTCTCAAA
CAGGACCTTGTCTAAGATCGGTTTGAGGGGTTCATTTCTTAAACCTAACA
TGTTTGTTTCTGTGGCGTGACTTGATGATCACAGCGAAACCTAAGGCTGC
TGTCGTCGGAGTTTGTTCACAACTTACGGGGACGCGTGTATGGACCAGCC
CCGGGTGTCTACAACGAAATGAGGGCGCTCGGTAGAAAACAGCACGCAAC
ACGCCTAGCAGGCACATGAGCAACGGACAGCAGTGGCGCTTACAAAGATG
TGTGCTTTGGGCAAAAATCATTCATGCAATTCGCTGGCATACCCTGATAC
ATCACAGCATGACGATACTGCCGCGCTGACGGCGAAAGAAGCGCATGGCG
CGCGCGTGAACTTTTTGTTTCGCGCAGCTGGGATCGGAAGTTGAGGTGCC
CCCACGTGTGCGCAAAGTTTGTTGAGCGCAGCAAGTTCAAATCTCGGCAG
AGTTACGAGTACACGATGTGGACCTTTCTCACACAATGCACTACAGGATG
ATGTTGAGAAGCAGGCCACGAGCGAAGCGAAGTGAAGCGAAGTGAAGCGA
AGTGAAGCAAAGTGAAAGTTCCTTGCCGAACTGCTTCGAATTCATACCGA
CTTGTCGTGACGTGTATGTGTGTATGTGTGAGTGCATGTGCGAAAAACAA
AACAAAACAAAATGAGACAGGGGTGCCTGTGTTTAATTTTCGAGGTTTAT
GGTGTCTGTCTGTGTGTGTCCGGGATAATGGCCACATTTTGCAACACTTT
GGCACCAGTTCAGCGCAGATCATAACGACCAAGGGCTTGAACTAATGAGG
TAAATAGCATCTACCCACTGCTGCTGGGTTCACCGCAGCCCGTGTCCTAT
GCGCTCAGCTATGTTGTCGGAGGCGCGTTATTGTCGGTGTCCCTTTTTTG
TGAAAAATGATGAGAGTTGTTTTGTGTGATTTGTGCTGGCGGAGCACCAC
AGCTGTTCTGCTGCAGCAGCAGTTCTGCAGCCGCGGTACATATACGCCAC
CAAATAGCAACGCACACGACTTAACGCAGTTATTTGAGAAGCAGCCCTCC
AACGCACACTGCTTTTCATCCCCGATGCACTAGTATAGTACTATCATACT
AGTCGAGAGCGATTGAAATCGTTGGTCAACACGATTCGACCGCCGTGTGG
TACTTCGAAGTAGTAGACGAGGGAACGGGATGGTTGAATACTCTCTCGAC
AAACATCGCACAAAGAGAGCACCGAGAAGAAAGGTAGGCCAAGAAAAAAA
ATGAAAAGTAGAATGTGTGACACTCCTCCTTGTGTTACCTCGGCTGGTGC
GTCCAGTCCACCTGGCGCACAGAAAAGAAGGGATGACAGCAGTACGCACA
CATACACAAGGCATGCACCAGGCATGTACCAGGTACAAGCAGTACGACAG
CAGCATCATCGAGAAGGAAAGAAAGTTTTACCTGGATACTACCGTGATAC
GATGAGGGTTTCCTTCCAACCGGGCACGGGCAGATGGCGTGGCCAGATAC
GCAACTAGACCACCCTCTCATCACAACCGTTCAGAAGCCTACCTTGCTGA
GAGCTGTACGCTTCGCCTGCGACCACGGAAAGTGTCCCCCTACCAGTTGA
ACTAGCAGGACAGACAAAAACGAAAGGAACTGCCTGAGCAGAGATTGGAA
CGGCTTACAATTCCAGACAACAAATGATAACTCACAGGTTTTCAACTGAG
CTGCAAAAGTGGTGTTGAGAGCAGATTGGGTTTGTGAGAAACGCGTTTCG
ACTTGATTTATCTGGGCCGTGCATGTTCATTTTGTTGCAGAGGTGTTTCG
CATTTTTTTTCCGAATAAGTTATAACTCAGGGATTTGCAAAAGCAGCTCT
ATTTCGAGGGGAACAAAAAACCACCAGAAAAAAACGTATTCTCAGGAGCT
TTTGTCTTCTCTCTTTGGGCGGTAGATCGAAACTCCTTCCTCCGTGGGCG
TTCATCGCCAGAGACCCCCGTGGCTTAAAAAATTGCCCGGTATGCCATCG
AAATCTGCGTCCAATCCGCTTGGTCATCGGAGATACACTCGCGAAGACTA
CCGGTGTCGCGCGAACATACCCAGCAGACCTTCCATTTTGGTGCAGTTTT
GAGCTGCTGTATTCGTTCAGATACAAATTCGCAAGTGCACGAGGAATATA
TTTGTAGTACTGCAATCGTTTCTGACTGTCTGCTGCTGCTGTCAAGGCAT
CGGACGCCTCTCACACACCGCGTAAGTACGGCTGTGGCGATTTCGTGGGG
TGTGGCTGCTTGTGACGAGCTTGCGCTGCCCGCAACTGAAGCATAGTTGT
CTAGGTTGATCCGCGTTTTTACATCATTTTGTACAAGCATGCGGGAAGAT
GGTGCTCAAAACCGAGCTGTGAGCACCTCGATCTTGCGCTTCGAGGCCTT
CAGAAGCTGCAGAGATGTGATTCACAGAGGGGCCCAATCTGCTCTGATTG
CGATACTAAGTTTCTGGCACATCACAAAGCTTCGATGGGTGGGATTTATG
GAGCGTACAGCAGTCAGGGGGGGGCATCGCCAAGGATTTTTAAGGTAGAA
GTTTGACGTGTGAGAAACAAATCATACCGTCGGGGCCAAAAGTATCAAGA
AATCTGGGATACCAGGGACGGCTTCCGCCTAACGTTTATTTTTGGCCTCC
CTCAACACAACTGAAGAACAGTAGGGTACCCTCGGCGGGGCTTAGTGACT
CGTGTGATCAACGTTTATTTGCACACGTTTGTGACACAGGAGGTGCAAGA
TGGAACATCTGGCTGGAGGTCGTCTCGTGACGTGGTGGCAGCAAACTGAA
GCATAATAATGTGGTCAATATAATGCTAGGATTGATGCCAAATATTGGAG
CGTAAGGCCAGGGTTCAGCCCGAATCAACAAACGAAATTGACGCGATTTT
TTATCTGGGCTCATTTCGTGTCTGTGAAAGTTTCAACGCACGCGATCTGA
AAAAACAGGGCATTTTAAGTTTGGATTATTTTATAAGGTCGCGAACTTCC
ACAATACAAATAGGTTTTGCCACCAAAAAGGGCTAAAAACAGCACTAATT
ATTGCAGATTACATACCGTGTCACAAGAAGCGTGCCTCTCTGTTACGTCC
ATCCTCTGTGCTCGAGTTTTTTTGTACCCCGTGGCGAAGGGCCTAACCCA
GATTTTCCACGAAACCGATGCCCATCTTAGAGAGTGGTGTCAGGGGGGCC
GTAAAGCAGCAGCACCCGGCACGCCCACACCCGAACAACACAGGGCTATA
ACGGCGCAGCGCCAACAACACCGAACCAACACAAAATAGTCTGAATTTAA
TTTTTCATTTTTCAGAAAAGGAAATTATCTTCCTTTTTTTTGTACTGAGT
TCGAAGAGGCAGATGTCACACATATTCTGGTACCATACTCTCGCATGTTT
GCTCGACAAAAGTGTTGTAAATGACGAAGAAAGAGTGCATGATGAAGCTG
TACATGGCGCCCGGCGCTATCATTCCAAATATGTGTGTTTATCCCAATTT
ACCGTAGTACGCCAGTCTTGATCTTTTGGTGAATGTTTGGCGTAAGAGCC
GGGGTTACACAGGAGGAAGGTGAACGCAGTAACGTATCTTGTTTGCTCTT
GTGCCTACTCCCTTCTGCAGCGATTGCCTATAATGATATTTTTTCGCGAG
GAGAAGCGCTCGGCGCTCCCATCCCGTCGCCGATCGTGGCATCGTACATT
TGTTTTTCTTTACCCACGGTATGATCATGTCTGTTGTTGTCGGGCATGAG
TTAAGAAAATATCCCAGATGGTGGGACTTGCTCAGAAGTAGCAGCAAAAC
ACACACACGCAGATAGCGTTGAATGCTGGCCCGTCGCAGCCCGAGAGGAA
CGAATGCTGCGCTGTGAGTTAACATAATGATGCGCGGACAAGAGCAGATT
CCATGCTTACAGAGGTATGAAATGCGGGGAGACAAGCGATGCTGCGATTT
GGAGCCCACAGCACTTTGTCTGCTGCTCTCGACGTATGTGTGCTTGAGCC
GCTCTTGCAAGAAACAGCTGCACGGCTTTTATTGCGTTTCCTCCTGGAGT
TGTATCTACTGTACCTTGGACACAAACCGTATTGAAGAGTGAGAGAGAAA
AGGCAGAAATAATGGTGTACTTGTTAAAGACTTGCAACTTCGGCTTTGTT
TCTCATCCGATAGTTGACCTCCGCCGCGTTTGTTCCCACTAGAGTTTTTC
TCAAAACAGCGCATTAAATGTTTTCTTTGGAATGCTCTCGCGTTGCGTAT
TGTGTTGTCTACTGCTGTTGGATGTTTTGCGCAGTGAAGTACCATCCGTT
CGCGGGGCAGCAGCACAAGAGGCACCGGACGTGCCGGAGGTGGTGGGCTT
CGCCGAGGGCGGGCAAAATGATCCAGCAGCCCCTGTCGTGGCCTTTGCCA
TCTCTATCACTAGCTTGGAGCTGCCCAGGGCTTTACCGTGAGCAAGACGT
TTTTGCGTCAGGCTTGTACATTTTCTGCAATAGGTCTAGACGGCTAGACT
GCTACGAGATATCACCGTGAGTGCTGCTCTGTTGCTGAAGGGGGGGCACA
GATCCGTGTTTGCCCTCCCGACACCGTCGTTCGCGATCTGGCTGCGACGG
GCTCCAAGTCTTGCGCCGTTTCGCGCCGCTTCGATAGTTTCACTCTCTGT
CCTCGTCGTCGTTGACGTCGCCGTCGTCTGTCCCAGAGCTGTTGATTCTC
GTGTGCATCCAAAAAGTGCCCGAGTAGGCAAGCAAACGTTCTCGAAACAA
TCAGGGCATGATTCATCTCTCCCACGCTGCACGCCTTTACAAGGGTCGAG
CAGCCGAAAGTGAGGAAATACACGTCCTCCCCTTCCTTGTGGTTTTCGCC
GGTTTTCACTTGCCTCACCCGTACAGCAGGACGTATGTACGCGACACGTT
GGACGAATCACCGTGTGAAATGTTTCTACTCCAATCACCCAGTCAAGCAA
ATATTGGAGAACCAATCAGAAAAACTCGTATGGAACAACACAAACGCCAA
ACGCGCAGCATGCTGGACTCGGCCGAGGTGCTCCTCCACTCGATCCAGGC
AGCCTGCAAGCTCTCTCGCTACCGCTGTGAGACGGTGGCTTTCGCTCTTC
CATCTGTTGGTCCGGAGGGGCTACGGCATCTCGAAAACATGGGATGGAGG
TGCGTTGACTGACTTCTTTTTATCACGTACACCATGACCAAACTCTGGAC
GGTCGTAAGGGTTTCTTAGCGCGGTGGCACCCCCTCTACAATCGCGTCCC
TCGACAAAGGCCTTTTGTTGTGTGTCGCGAGCAGCTGCATGAGTTACGCT
TAATATTCGAAGTACCAGTTATAACCTCGGCGGTCGCTTGACCGATTGCC
AAGGTTGAAGAAGTCAGCAGCAACTGTCGAAAGCAATAAGCTTTCCATCG
AGTGCCAGCAAGCCGTGTAGAAGTCGCCTGTCTCTCGTGGTGCCCGCTGG
TTACCTACCTCATTTCCCATCTGTGTCCCTGGGGCAGACATATTTGTGTC
CCGTGTGTCGTATAAGGATATTTTGTTATTCGGACCTCTCAAGTTTGAAG
AAATTTCCTCCCGTCTTTCGGTGTCTTTGCTGCGCACACTAACTTACCTT
TGTTTTGAGCTCACCGGCAACACGTACAGCATCAATCTTTGCTCGCATGG
TGGACGCTCTCTGTGGGAAGGCCGACGCCCAACAGAGGAGGCAACAGGAT
AGATGCACGGCTACCTTGAACCCTCATCAAAATCGGATCATTTCATCACG
AAATCAACACGAGAAACAACAACGACAACAGTAGCAGCGAAATCTCTGTT
TGTGCATCTTGCACTTGTTGATCAGGGTTGTGGAGAAGGACGTACCGGTG
GCTTTGGAAGAAATTGAGGACGAGAGTTATCGAAATCGCGTCGTCAAAAC
GGGGTGAGTGTCCGTTTATCTATTCTGTTGTATCACATGTGCCGTGCGAT
CGTCCCGTCGCTTGCTCTTCAAGCACGGTTGTTGCGAAAGGTATACTTGC
AATCGGTGGTTGTTGCGAAAGGTATGCGGTATGCTTGCAAGTATAGACGT
CCGTCGCCCTGCATGGGCTAGTCGAGCTGCGATTTCATACTTCTATGCTT
GCATGTACGGTGTGGCTCATACTCCATGATATGACACATGGTCCTTTCCT
GTGCTACATCTTCGCTGTTGTATCGTGAGTTGTCACCATCATCGACATCA
TCGCCGTCAGCACCATCGTGGTCAAGCCACTCGTTTGCTTTTTGCTTATT
GTTGGTCCGCACTGCTGTTTTGTGTTTTGTTTGATTTCCGTGGTGTTTAC
TGCAGGTGCTGCGGGGAGAAAGAGTTCATAAAACTCCACGCCTATACCCT
CACGGACTACCACCGCGTTGTGCATCTGGATACAGATACGCTCATCTTAC
ATCCCATGGACGAACTCATGGGTAGGCGTTGTTCTTGTTGTCGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGTTG
CAGTTGCTGTTATTCTTGTTGTTGCTGCTGCTGCCGTGTGTGTTTGCCTA
GCCTGCCTTTTTTCAACTTTGTGGAGGTCAGAAGACAGCCCGGTGTACTT
GACAAAGTCATTGCTCACCGCCACAAAATTCAAAACCTGCCTGGGCATGG
TACCCCAAAAGTGGTGCCGCTATCATCGCCTCTGCACGCTCGCACGCCTT
TCCTACTCCCAACCAAACCCACCAGAGTCTGCCGAAAGCCTGCTGTACAC
CACCGATCCCGCTATGGCTACGCGAAGATCGAAGGAGTTACCTGTGCAGG
GAGGATTTCTCCTTGTCCGCCCGGACCTGAGGGTTTACGACGAGCTTCGG
GCGATCATACGCAAGGTGATGTAGTGTAGGTCGTTTGGCCACTTTGTGTC
AGCACCCCGGAGATACATGTGTACATGAACACGTATAATTTCCGACGTTC
AGATACGTCGCTGCGTACTGCACACTGTCGAGAGAACTGTCCGACACGAT
AAACGGGCTCTTCACCTGAACGGTGGTCAGTCAACAAACAAGATACACCG
GTGCACAGCAGCAGACAGGTGGCCTCTTTTTCATAGCTGCTGCAGTTAAG
ACAGGCGGCCTCTGCTGATGAAGCAGCAGTTGAAGACGCAAAGTATGCTA
CAAGTATGGTACTAGTATCTGGTACATACACGTTTTGCTGTAGGGCTGCT
GTATGACACGTGATCTTTGTGTTGTGATCTTCGTCAAAATTGATGCATAC
TACAAGGGAAATCACGAAATCATCGAGTTACAGCAGCAGCAGCAGCAGCA
AGGTATGGTAGTTCGATTGTGTATATATAACAGGTGGGGAGCCACACACA
GCATCTCCACAAGGCCGAGTGTTCAGCTGGCAGCGTTGCTGGCAGCAAGT
GTGTGATGAACCGCACGCATAAAGAGGAATAAGTATCAGACCTTTGCAAG
AGCGTGTGTTCCCCTTCCTGCCGAGCTCGATAGAGTGCTGTCCGGAGTGA
ACCACGCGTGTGTGCAAGTGTGTGCACAAGTTTAGCCCTCTGATCTCCGT
GTGTGTGCCCAAGCTTCCGTAATGCTTTAGCTCAGTTTCCAAATATGCTC
AAGGTTTCTCATCAAATATCACTGACCCTTAGTGGGCATCTCGCGCACCC
GAAAGGGGCCACACAGACCGTACAACACCCCACCTGGACGTTGCAAAATA
CAAGAACGGACGTCCCCTATGGACCGCCCGTAACATATACTCAACCAACC
AACAAGAGGGGGGACTTAACCTTCGCCTCGGTGGCACCCACACCGCTATT
TTGAGGGAAAGGGGCTTGCCGTGGAGCACGATAATAAAATGACGCCTCGT
TTTTGTCGCCCGCGCCCTTGTCTTGACTTGTCTTGACTTGTCTTGACTGC
CGCCTTTGGTTTTGAGCGCGCCCGGCAACCAATCAATAATCTGGTTCGTG
GTTCGACTTTTTTCTTTGTTTTGTCATCAGGGGGACTGGAAAATAGGGAC
GGGATGGGGTGGAAGCAACATCGGCTATTTTTACGGAGGTGCCACGATCC
AGGGGTTGCTGCCGTACTACTACCACGTCGTCGCGCCGGGAACGGCGAAA
GAGCTCAACAGGTGTTCTGCGCGGGCGGGTGGTTTGTGATGGTTGCCGGT
GTTGGCTGAAGCTTGACCTGGCGCTGACTGTTTGCGTTGTCGCTGGCTGT
TGGCTTTGTCATGATACAAAACACCTACCAGGTACCTGGTAGATGTTTGC
CATTTAACCCCCCCCCCCCCCGCCCCGCCCCCCCCCCGCCCCCGCGTGTA
AGGTGCATATACAACCACATGTCAGACAGCGACGAGTGCCGACGCACGGA
CCGATACGCCGTCCTCCCTTCAGGGACGGAAGCGGACGCATCGCCGACAC
TGGCTGATGCGCAGAGACTTGCTGAGCTTGGGGCGCTGGGGGGCTCACCG
GGAACTCGAACTCCCGTAAGCGGCACCGGACTAGCTGCGACGATGCCTGA
CGCTGCTGCTTCCGGGGTGTCGGCGATCAAGAGCGTGCACTTCACGCAGT
CTTGCATGAAGCCGTGGCATTGCGGTCGGCGGAAGGTGAGGAGAGAGTTA
ATTCAGCCGGGCAGATGTTTTGCGGCACATTTGCTATTGGGACGTACTCA
CTGTCCGGCAGGCTGGGACATGTTTTAGAACTGACCATTGCCGTGTAGTC
ACCACAACTGTTTTTTCTCCGCGCTGGGTGAGAGCCTTTGTTTGTCTCCA
CGCTGTGTCTTTTTTTTGTTTCAAAGAGCTTGTACACGTCCGAGTTCGCG
ATACTCTTGATCATGCGAGAAGTGGTGCCACGGTCTGCACAACAGCGCGG
TAGGCGAATGAACGGTTCGCAGATTTATGTCGCCTAATGCCTCCTGCCTG
TACAGCACGCTCCTTTTATGGCCTCTCGTGGATGAAATGATGCGAGAAAC
GACGACGACAACAAACGGGGAGCAACGAGTGATTTGAACATGACAAACCT
GTTTCTCGTTTGGTACTTGATTCATGCCACCCGTTGACGCACACGGACAC
CGTCACTGCACAGGACCAGAACGAGGGCTCTTGCGCATTGCTGCAACAAG
CCTGGAGCGAGACTAGAAGCATCATCATGTCGAAAATGGGGTTGCCCGTC
ACGGAGACTTGCGCAAAAGGCAGGTATACGCCGATTCCCCGAAGTTAGCG
CATTCGTCTGCCTAACTGGTGTTCTCTCAAGTCAGGCTGGAGGCCTTTTT
TGGCCTCATGTTCTTCACCGGCCCCATGTCCTCTCCGCCATATCCTACGG
TTCAACGTCTAGAAGGGATCGTCGATCGAGAC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig156:9648..23229+

>mRNA_P-littoralis_Contig156.5.1 ID=mRNA_P-littoralis_Contig156.5.1|Name=mRNA_P-littoralis_Contig156.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1335bp|location=Sequence derived from alignment at P-littoralis_Contig156:9648..23229+ (Pylaiella littoralis U1_48)
ATGGAAGGCCAGCTGTATAGACATAAGAGCGGAAGTAAGAGAAGACGGGT
GGGCAGCGCTCGATCGGGGTTGCGGTGTCTCGTGATTCCATGCCTGGCCT
TCGCTGGGGTCTGCGGCGTGAGCACCTCTCTGAGATGGCAGTTGTTCCGC
GAGGCAAGTGAAGTACCATCCGTTCGCGGGGCAGCAGCACAAGAGGCACC
GGACGTGCCGGAGGTGGTGGGCTTCGCCGAGGGCGGGCAAAATGATCCAG
CAGCCCCTGTCGTGGCCTTTGCCATCTCTATCACTAGCTTGGAGCTGCCC
AGGGCTTTACCCATGCTGGACTCGGCCGAGGTGCTCCTCCACTCGATCCA
GGCAGCCTGCAAGCTCTCTCGCTACCGCTGTGAGACGGTGGCTTTCGCTC
TTCCATCTGTTGGTCCGGAGGGGCTACGGCATCTCGAAAACATGGGATGG
AGGGTTGTGGAGAAGGACGTACCGGTGGCTTTGGAAGAAATTGAGGACGA
GAGTTATCGAAATCGCGTCGTCAAAACGGGGTGCTGCGGGGAGAAAGAGT
TCATAAAACTCCACGCCTATACCCTCACGGACTACCACCGCGTTGTGCAT
CTGGATACAGATACGCTCATCTTACATCCCATGGACGAACTCATGGAGTC
TGCCGAAAGCCTGCTGTACACCACCGATCCCGCTATGGCTACGCGAAGAT
CGAAGGAGTTACCTGTGCAGGGAGGATTTCTCCTTGTCCGCCCGGACCTG
AGGGTTTACGACGAGCTTCGGGCGATCATACGCAAGGGGGACTGGAAAAT
AGGGACGGGATGGGGTGGAAGCAACATCGGCTATTTTTACGGAGGTGCCA
CGATCCAGGGGTTGCTGCCGTACTACTACCACGTCGTCGCGCCGGGAACG
GCGAAAGAGCTCAACAGGTGCATATACAACCACATGTCAGACAGCGACGA
GTGCCGACGCACGGACCGATACGCCGTCCTCCCTTCAGGGACGGAAGCGG
ACGCATCGCCGACACTGGCTGATGCGCAGAGACTTGCTGAGCTTGGGGCG
CTGGGGGGCTCACCGGGAACTCGAACTCCCGTAAGCGGCACCGGACTAGC
TGCGACGATGCCTGACGCTGCTGCTTCCGGGGTGTCGGCGATCAAGAGCG
TGCACTTCACGCAGTCTTGCATGAAGCCGTGGCATTGCGGTCGGCGGAAG
GACCAGAACGAGGGCTCTTGCGCATTGCTGCAACAAGCCTGGAGCGAGAC
TAGAAGCATCATCATGTCGAAAATGGGGTTGCCCGTCACGGAGACTTGCG
CAAAAGGCAGGTATACGCCGATTCCCCGAAGTTAG
back to top