mRNA_P-littoralis_Contig156.141.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig156.141.1
Unique NamemRNA_P-littoralis_Contig156.141.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: D8LP41_ECTSI (Mannuronan C-5-epimerase (Partial) (Fragment) n=2 Tax=root TaxID=1 RepID=D8LP41_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 9.500e-143
Identity = 204/298 (68.46%), Postives = 248/298 (83.22%), Query Frame = 1
Query:    1 LCTLGILACGFW---GARGNTPIPKPACDASKDVSVRYSSISQRIYLESVDGTRGCCATPTSVHESLGPLSPLYPLETPGEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDA 885
            L T+  L CGF    GA+ NTPIPKP CD+SK++SVRYSS S+RIYLES+DG+RG CA+PT VHE+LG  SPL+PLETPGEWML ESL+VLD I+LN+Y TDVGGD DY+KLRSDS M V++RAHGGSLDL++TKVTSWD + GDVDTDW+DGRS++SAISEV++D++E C GSAK  M EARMD+E  EIA+LG E +ESWG+SWKLRG+CNDKSN D YEG+GVYGN+L S+VH LYYGHY YR    L   N+V +NE+YGFDPHDDSV +TIS+N V+ N N G+I+SKYCH+A
Sbjct:    5 LGTVLFLTCGFSAYSGAQANTPIPKPICDSSKEISVRYSSTSKRIYLESIDGSRGGCASPTMVHEALGDASPLFPLETPGEWMLSESLHVLDGITLNLYGTDVGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSFLSAISEVVLDTSETCVGSAKNDMGEARMDIENCEIAFLGYEEAESWGISWKLRGVCNDKSNLDMYEGVGVYGNLLGSEVHDLYYGHYGYRQSFALLSRNSVYNNEVYGFDPHDDSVNITISHNDVYFNFNHGVIWSKYCHNA 302          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 5.880e-137
Identity = 198/283 (69.96%), Postives = 240/283 (84.81%), Query Frame = 1
Query:   37 GARGNTPIPKPACDASKDVSVRYSSISQRIYLESVDGTRGCCATPTSVHESLGPLSPLYPLETPGEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDA 885
            GA  NTPIPKP CDAS++VSVRYSS SQRIY+ESVDG+RG CA+PT+V+E+LG  SPL+PLETPGEWML ESLYVLD I+ N++ TD GGD DY+KLRSDS M V++RAHGGSLDL++TKVTSWD + GDVDTDW+DGRSY+SAISEV++D++E C GSAK+ M EARMD++  EIA+LG E  ESWG+SWKLRG+CNDKSN D YEG+GVYGN+LDS VH +YYGHY YR    L  GN+V +NE+YGFDPHDDSV +TIS+N V+ N N G+I+SKYCH+A
Sbjct:  315 GAMANTPIPKPVCDASREVSVRYSSTSQRIYIESVDGSRGGCASPTTVYEALGDASPLHPLETPGEWMLTESLYVLDGITFNLHGTDAGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSYLSAISEVVLDASETCVGSAKEDMGEARMDIQNCEIAFLGYEEVESWGISWKLRGVCNDKSNLDLYEGVGVYGNLLDSDVHDMYYGHYGYRQSFALLSGNSVYNNEVYGFDPHDDSVNITISHNEVYFNFNHGVIWSKYCHNA 597          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: O39824_9PHYC (GP-1 (Fragment) n=4 Tax=Phaeovirus TaxID=181085 RepID=O39824_9PHYC)

HSP 1 Score: 347 bits (889), Expect = 5.590e-115
Identity = 161/229 (70.31%), Postives = 195/229 (85.15%), Query Frame = 1
Query:  121 RIYLESVDGTRGCCATPTSVHESLGPLSPLYPLETPGEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSV 807
            RIYLESVDG+RG CA+PT+++E+LG  SPL+PLET GEWML ESL+VLD I+LN+Y TDVGGD DY+KLRSDS M V++RAHGGSLDL++TKVTSWD + GDVDTDW+DGRS++SAISEV++D++E C GSAK  M EARMD+E  EIA+LG E +ESWG+SWKLRG+CNDKSN D YEG+GVYGN+L S+VH LYYGHY YR    L   N+V +NE+YGFDPHDDSV
Sbjct:    1 RIYLESVDGSRGGCASPTTIYEALGDASPLFPLETAGEWMLSESLHVLDGITLNLYGTDVGGDVDYIKLRSDSEMTVSIRAHGGSLDLLNTKVTSWDSSKGDVDTDWSDGRSFLSAISEVVLDTSETCVGSAKNDMGEARMDIENCEIAFLGYEEAESWGISWKLRGVCNDKSNLDMYEGVGVYGNLLGSEVHDLYYGHYGYRQSFALLSRNSVYNNEVYGFDPHDDSV 229          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 9.740e-97
Identity = 169/347 (48.70%), Postives = 217/347 (62.54%), Query Frame = 1
Query:    1 LCTLGILACGFWGARGNT-----PIPKPACDASKDVSVRYSSISQRIYLESVDG-TRGCCATPTSVHESLGPLSPLYPLETP---------GEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDAQVTNNHVY--SNYGVGIFAHYVGDFSQIMHNVVEDNG 990
            L  LG+LA     A  +T     PI KP CD+  +VS+RY+  ++R+YLES DG TRG CAT   + ES    +PLY ++           G W+L E LYV D I+L +Y TD GGD D L+L S S   +N+RAHGGSLD + TKV SWD +T   D D  DGRSYISA+SE++ D  E CEG+AK +M EARMD+E SEI YLG + SES+GL+WK+RG C DKSN + ++ + VYGN+ DS +H L +G Y+Y H  G ++ N + DN  YGFDPHDDS  LTI  N V+NN   GII SK C+   +  N VY  +    GIF H   D + +  N V DNG
Sbjct:   14 LALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNG 360          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 7.590e-89
Identity = 155/319 (48.59%), Postives = 199/319 (62.38%), Query Frame = 1
Query:   19 LACGFWGARGNTPIPKPACDASKDVSVRYSSISQRIYLESVDG-TRGCCATPTSVHESLGPLSPLYPLETP---------GEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDAQVTNNHVY--SNYGVGIFAH 939
            LA G      N PIPKP CD S  VS+RYSS+ +R+YLES D  TRG C T   + E     +PLY +++          G W+L E L+V D I+L ++ T  GGD D L+L S S   +N+RAHGGSLD +STKV +WD +    D D  DGRSY+SA+SEV+ D ++ C G AK +M EARMD+E SE+ YLG   SES+GL+WK+RG C DKSN D +E + VYGNI DS +H   +G Y+Y H  G ++ N + DN  YGFDPHDDS  LTI  N V++N   GII SK C+   +  N VY  +    GIF H
Sbjct:   18 LAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLH 336          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 2.040e-88
Identity = 152/313 (48.56%), Postives = 196/313 (62.62%), Query Frame = 1
Query:   91 VSVRYSSISQRIYLESVDG--TRGCCATPTSVHESLGPLSPLYPLE---------TPGEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDAQVTNNHVY--SNYGVGIFAHYVGDFSQIMHNVVEDNG 990
            VS+RY+  + R+YLES D   TRG C T   + ES     PLY ++           G W+L E LYV D I+L +Y ++ GGD D L+L S +   +N+RAHGGSLD +STKV SWD +T   D D  DGRSYISAISE++ D  E CEG+AK +M EARMD+E SEI YLG   SES+GL+WK+RG C DKSN + ++ + VYGN+ DS +H + +G Y+Y H  G ++ N + DN  YGFDPHDDS  LTI  N V+NN   GII SK C+   +  N VY  +    GIF H   D + +  N V DNG
Sbjct:   44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNG 356          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 4.880e-88
Identity = 149/300 (49.67%), Postives = 192/300 (64.00%), Query Frame = 1
Query:    1 LCTLGILACGFWGARGNT-----PIPKPACDASKDVSVRYSSISQRIYLESVDG-TRGCCATPTSVHESLGPLSPLYPLETP---------GEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQG 855
            L  LG+LA     A  +T     PI KP CD+   VS+RY+S ++R+YLES DG TRG C T   + E+    +PLY ++           G W+L E LYV D I+L +Y T  GGD D L+L S +   +N+RAHGGSLD + TKV SWD +T   D D  DGRSYISAISE++ D  E CEG+AK +M EARMD+E SEI YLG + SES+GL+WK+RG C DKSN   ++ + VYGN+ DS +H + +G Y+Y H  G ++ N + DN  YGFDPHDDS  LTI  N V+NN N G
Sbjct:   13 LALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 2.990e-87
Identity = 152/313 (48.56%), Postives = 196/313 (62.62%), Query Frame = 1
Query:   91 VSVRYSSISQRIYLESVDG--TRGCCATPTSVHESLGPLSPLYPLE---------TPGEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDAQVTNNHVY--SNYGVGIFAHYVGDFSQIMHNVVEDNG 990
            VS+RY+  + R+YLES D   TRG C T   + ES     PLY ++           G W+L E LYV D I+L +Y ++ GGD D L+L S +   +N+RAHGGSLD +STKV SWD +T   D D  DGRSYISAISE++ D  E CEG+AK +M EARMD+E SEI YLG   SES+GL+WK+RG C DKSN + ++ + VYGN+ DS +H + +G Y+Y H  G ++ N + DN  YGFDPHDDS  LTI  N V+NN   GII SK C+   +  N VY  +    GIF H   D + +  N V DNG
Sbjct:   44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNG 356          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 6.260e-87
Identity = 152/322 (47.20%), Postives = 200/322 (62.11%), Query Frame = 1
Query:   61 PKPACDASKDVSVRYSSISQRIYLESVDG-TRGCCATPTSVHESLGPLSPLYPLE---------TPGEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDAQVTNNHVY--SNYGVGIFAHYVGDFSQIMHNVVEDNG 990
            PKP CD+S  VSVRY++ S R+Y+ES +G TRG C T   + E     SPLY ++           G W+L E +YV D I+L ++    GGD D L+L S S   +++RA+GGSLD +STKV +WD +    D D +DGRSYISA+SEV+ D  + C G AK +M EARMD+E SE+AYLG   +E++GL+WK+RG C DK N + ++ + VYGNI DS +H   +G Y+Y H  G ++ N + DN  YGFDPHDDS  LTI  N VWNN   GII SK C+   +  N VY  S+   GIF H   D   +  N V DNG
Sbjct:    6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNG 327          
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 283 bits (725), Expect = 1.290e-86
Identity = 158/329 (48.02%), Postives = 203/329 (61.70%), Query Frame = 1
Query:   40 ARGNTPIPKPACDASKDVSVRYSSISQRIYLESVDG-TRGCCATPTSVHESLGPLSPLYPLETP---------GEWMLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLMSTKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEARMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILDSKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVWNNENQGIIFSKYCHDAQVTNNHVYSNYG--VGIFAHYVGDFSQIMHNVVEDNG 990
            A  N  I KP+C +S  VS+RYS  S+R+YLES DG TRG C T   +   L   +PLY ++           G W+L ESLYV D I+L ++    GG  D L+L S S   +N+RAHGGSLD +STKV +WD +   V TD + GRSYISA+SEV+ DS + C+G AKK+M EARMD+E SE+AYLG   SES+GL+WK+RG+C D SN + ++ + VYGNI DS +H  Y+G Y+Y H  G ++ N +  N  YGFDPHDDS  LTI  N V+NN N GII SK C+                VGIF H   D + +  N V DNG
Sbjct:   25 ASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNG 353          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP41_ECTSI9.500e-14368.46Mannuronan C-5-epimerase (Partial) (Fragment) n=2 ... [more]
A0A6H5KU33_9PHAE5.880e-13769.96MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
O39824_9PHYC5.590e-11570.31GP-1 (Fragment) n=4 Tax=Phaeovirus TaxID=181085 Re... [more]
D7FXE4_ECTSI9.740e-9748.70Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE7.590e-8948.59Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FXE5_ECTSI2.040e-8848.56Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE4.880e-8849.67MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G339_ECTSI2.990e-8748.56Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE6.260e-8747.20Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A8CEP1_SACJA1.290e-8648.02Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig156contigP-littoralis_Contig156:414904..416351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LC73
PFAMsWSC
Model size1448
Max annot lvl2759|Eukaryota
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.44e-55
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Descriptionprotein xylosyltransferase activity
Cds size1047
COG categoryU
BRITEko00000,ko00001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789746.9110277-UTR-P-littoralis_Contig156:414903..4150671680789746.9110277-UTR-P-littoralis_Contig156:414903..415067Pylaiella littoralis U1_48UTRP-littoralis_Contig156 414904..415067 -
1680789746.9334671-UTR-P-littoralis_Contig156:416114..4163511680789746.9334671-UTR-P-littoralis_Contig156:416114..416351Pylaiella littoralis U1_48UTRP-littoralis_Contig156 416115..416351 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789746.9241352-CDS-P-littoralis_Contig156:415067..4161141680789746.9241352-CDS-P-littoralis_Contig156:415067..416114Pylaiella littoralis U1_48CDSP-littoralis_Contig156 415068..416114 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig156.141.1prot_P-littoralis_Contig156.141.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig156 415068..416114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig156.141.1

>prot_P-littoralis_Contig156.141.1 ID=prot_P-littoralis_Contig156.141.1|Name=mRNA_P-littoralis_Contig156.141.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=349bp
MLDESLYVLDDISLNIYSTDVGGDCDYLKLRSDSSMIVNVRAHGGSLDLM
STKVTSWDPATGDVDTDWADGRSYISAISEVLVDSAEVCEGSAKKSMAEA
RMDVEGSEIAYLGMEASESWGLSWKLRGICNDKSNRDSYEGIGVYGNILD
SKVHRLYYGHYSYRHLNGLFKGNAVRDNEIYGFDPHDDSVGLTISYNTVW
NNENQGIIFSKYCHDAQVTNNHVYSNYGVGIFAHYVGDFSQIMHNVVEDN
GSQNHQVANDHARKRVSIKHVARRATALNHHHFVVTGVLIQIVPIVVFHH
IGGYHIVTRTNRETDAVDVVAHSVVVHKAIGGLEKRNPSLFRTRLRTG*
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mRNA from alignment at P-littoralis_Contig156:414904..416351-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig156.141.1 ID=mRNA_P-littoralis_Contig156.141.1|Name=mRNA_P-littoralis_Contig156.141.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1448bp|location=Sequence derived from alignment at P-littoralis_Contig156:414904..416351- (Pylaiella littoralis U1_48)
TTGTGCACTCTCGGCATCCTGGCCTGTGGTTTTTGGGGTGCTCGAGGTAA CACACCCATCCCTAAACCGGCTTGCGATGCCTCGAAGGATGTGTCTGTGA GGTACAGCTCAATCTCGCAGCGCATTTACTTGGAGTCGGTGGATGGGACG CGCGGCTGTTGTGCCACTCCTACCAGTGTTCACGAGTCTCTTGGCCCCCT CAGCCCTCTCTACCCTCTCGAAACGCCCGGGGAGTGGATGCTCGACGAGT CTCTGTACGTGCTGGACGACATCAGTCTCAACATTTACAGCACCGACGTT GGTGGCGACTGTGACTATTTGAAATTGCGTAGCGATTCCTCCATGATCGT GAACGTTCGCGCGCACGGTGGGTCGCTGGACCTGATGAGCACCAAAGTGA CCTCGTGGGACCCTGCGACGGGCGACGTCGATACTGATTGGGCAGACGGC CGTTCGTACATTAGCGCTATTTCCGAGGTGTTGGTCGATTCGGCGGAGGT GTGCGAGGGTTCGGCGAAAAAAAGCATGGCGGAGGCTCGTATGGATGTGG AGGGCAGCGAGATTGCGTATTTGGGCATGGAAGCGTCCGAAAGCTGGGGG CTGTCGTGGAAGCTGCGCGGTATTTGCAATGACAAGAGTAACCGCGACAG CTATGAGGGTATCGGTGTGTACGGTAACATCCTGGACAGCAAAGTGCATC GCTTGTACTACGGGCACTATTCGTACCGCCACTTGAACGGGCTTTTCAAG GGGAACGCTGTTCGCGACAACGAGATCTACGGGTTCGATCCGCATGATGA TTCTGTCGGCCTCACTATTTCGTACAACACTGTGTGGAACAATGAGAACC AAGGTATTATTTTCTCCAAATACTGCCACGACGCCCAGGTCACGAACAAT CACGTGTACTCGAACTACGGGGTGGGTATTTTTGCCCATTACGTTGGCGA CTTTTCGCAGATCATGCACAATGTGGTTGAGGACAACGGTTCACAGAATC ATCAAGTCGCAAACGACCACGCCAGAAAACGTGTTTCGATAAAACACGTT GCTCGTCGGGCTACCGCTCTCAACCACCACCACTTCGTCGTTACCGGCGT ACTGATACAAATCGTACCCATTGTTGTCTTCCACCACATTGGCGGCTACC ACATTGTCACGCGAACAAACAGAGAAACGGATGCCGTGGACGTTGTTGCG CACAGTGTTGTTGTACACAAAGCCATCGGAGGACTCGAGAAACGCAATCC CAGTTTGTTTCGAACGAGGTTGCGAACTGGGTGAATTTCGAGATGGGGGA TTCGACCAACACTCTAGTTTTGGGCAACGCTTTCCCGTCTGACATGAGTT ATGTGTCGACCGGCTCTTGTGTGAACTCTGCGTCGGATGTTGATTTTGGT GACGTTTGTAGCGACGCTCCGATCGCGATCCCTTTCGGCCGGAGCGAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig156:414904..416351-

>mRNA_P-littoralis_Contig156.141.1 ID=mRNA_P-littoralis_Contig156.141.1|Name=mRNA_P-littoralis_Contig156.141.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1047bp|location=Sequence derived from alignment at P-littoralis_Contig156:414904..416351- (Pylaiella littoralis U1_48)
ATGCTCGACGAGTCTCTGTACGTGCTGGACGACATCAGTCTCAACATTTA
CAGCACCGACGTTGGTGGCGACTGTGACTATTTGAAATTGCGTAGCGATT
CCTCCATGATCGTGAACGTTCGCGCGCACGGTGGGTCGCTGGACCTGATG
AGCACCAAAGTGACCTCGTGGGACCCTGCGACGGGCGACGTCGATACTGA
TTGGGCAGACGGCCGTTCGTACATTAGCGCTATTTCCGAGGTGTTGGTCG
ATTCGGCGGAGGTGTGCGAGGGTTCGGCGAAAAAAAGCATGGCGGAGGCT
CGTATGGATGTGGAGGGCAGCGAGATTGCGTATTTGGGCATGGAAGCGTC
CGAAAGCTGGGGGCTGTCGTGGAAGCTGCGCGGTATTTGCAATGACAAGA
GTAACCGCGACAGCTATGAGGGTATCGGTGTGTACGGTAACATCCTGGAC
AGCAAAGTGCATCGCTTGTACTACGGGCACTATTCGTACCGCCACTTGAA
CGGGCTTTTCAAGGGGAACGCTGTTCGCGACAACGAGATCTACGGGTTCG
ATCCGCATGATGATTCTGTCGGCCTCACTATTTCGTACAACACTGTGTGG
AACAATGAGAACCAAGGTATTATTTTCTCCAAATACTGCCACGACGCCCA
GGTCACGAACAATCACGTGTACTCGAACTACGGGGTGGGTATTTTTGCCC
ATTACGTTGGCGACTTTTCGCAGATCATGCACAATGTGGTTGAGGACAAC
GGTTCACAGAATCATCAAGTCGCAAACGACCACGCCAGAAAACGTGTTTC
GATAAAACACGTTGCTCGTCGGGCTACCGCTCTCAACCACCACCACTTCG
TCGTTACCGGCGTACTGATACAAATCGTACCCATTGTTGTCTTCCACCAC
ATTGGCGGCTACCACATTGTCACGCGAACAAACAGAGAAACGGATGCCGT
GGACGTTGTTGCGCACAGTGTTGTTGTACACAAAGCCATCGGAGGACTCG
AGAAACGCAATCCCAGTTTGTTTCGAACGAGGTTGCGAACTGGGTGA
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